Re: [ccp4bb] Register now: Stanford Electron Microscopy-X (EM-X) Symposium October 2, 2023

2023-09-25 Thread Polizzi, JoAnn 
Friendly Reminder to register for the Stanford EM-X symposium on October 2, 
2023.

Best,
JoAnn 


From: chiula...@slac.stanford.edu  on behalf of 
Polizzi, JoAnn <021050d09cb7-dmarc-requ...@listserv.slac.stanford.edu>
Sent: Friday, September 22, 2023 8:10 AM
To: 3...@ncmir.ucsd.edu <3...@ncmir.ucsd.edu>; cryoem-announce 
; chiulab-l 
Subject: Register now: Stanford Electron Microscopy-X (EM-X) Symposium October 
2, 2023


Dear Colleagues,



We are pleased to invite you to our October 2023 Stanford Electron Microscopy-X 
(EM-X) Symposium on Monday, October 2nd, 2023, 8:00-9:30 AM (PST).



Speakers:

Prof. Stephen K. Burley

Professor at Rutgers, The State University of New Jersey

Talk Title: Cryo-EM Through the Lens of the Protein Data Bank: Impact of the 
Resolution Revolution and Implications for the Future

Bio: Stephen Burley currently serves as Henry Rutgers Chair and University 
Professor, Founding Director of the Institute for Quantitative Biomedicine, and 
Director of the RCSB Protein Data Bank at Rutgers, The State University of New 
Jersey. He is also a Member of the Rutgers Cancer Institute of New Jersey, 
where he Co-Leads the Cancer Pharmacology Research Program. Burley is an expert 
in structural biology, proteomics, bioinformatics, structure/fragment-based 
drug discovery, and clinical medicine/oncology.



Prof. Dan Gianola

Professor at the University of California, Santa Barbara

Talk Title: Characterizing pathways for plastic deformation using electron 
microscopy

Bio: Daniel Gianola is Professor of Materials at UCSB, where his research group 
specializes in deformation at the micro- and nanoscale, particularly using 
in-situ nanomechanical testing techniques. He has also served as the faculty 
director of the Microscopy and Microanalysis Facility at UCSB, which is a 
central shared facility with over 300 active users. He is the recipient of the 
National Science Foundation CAREER, Department of Energy Early Career, TMS 
Early Career Faculty Fellow, and Alexander von Humboldt Postdoctoral Fellow 
awards.



We expect a large attendance, please register soon at 
https://stanford.zoom.us/webinar/register/WN_g2SgqrB2R7Ke2p7Pmjre_w and visit 
our official website at https://emx.stanford.edu/ and 
https://emx.stanford.edu/previous-speakers to see our previous speakers.





We are looking forward to seeing you there!


[cid:5c0aefea-a3da-495b-baa8-e179f37e285e]



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[ccp4bb] FW: Stanford-SLAC Cryo-EM Center (S2C2) Image Processing Workshop for Cryo-Electron Microscopy

2023-03-24 Thread Polizzi, JoAnn 
We are pleased to announce the upcoming 2023 Image Processing Workshop for 
Cryo-Electron 
Microscopy
 at Stanford-SLAC Cryo-EM Center (S2C2) on May 17-19, 2023.  The workshop will 
alternate theoretical discussions with practical examples using experimental 
data with a main focus on Single Particle Analysis (SPA).  We will demonstrate 
simultaneously how to apply different software packages at different stages of 
the image processing pipeline (like Relion, Xmipp, CryoSPARC, among others), a 
task that we will achieve transparently using the software integration 
framework Scipion.  We will also address some advanced topics in Tomography in 
which an extra degree of robustness can be introduced along similar lines as 
those introduced in SPA with the help of Scipion running iMod, EMAN, Relion, 
Dynamo, and Xmipp. Attendees are expected to be familiar with standard image 
processing pipelines in Single Particle Analysis. On the last day the talks on 
theory and practices will focus on advanced image processing topics, as well as 
their connection with molecular motion, 3D visualization, atomic modeling, 
structure validation, and drug design.

This will be a hybrid workshop.  Due to available resources, we will have only 
50 spots for onsite hands-on practical participation with all others attending 
via Zoom.

We welcome all to register at the following link: 2023 Image Processing 
Workshop for Cryo-Electron Microscopy | S2C2 |Stanford-SLAC Cryo-EM 
Center.
  You will also need to fill out an online conference access form  Conference 
Attendee | Coming to SLAC 
(stanford.edu),
 required by SLAC guidelines. These steps must be completed in order to be 
considered for both "Practical" and "Zoom" participation.

The registration deadline for in-person participation is April 10, 2023.  
Notification of acceptance to the first-round of "Practical" participants will 
be sent out on April 14, all others will receive notice beginning April 17.  
The deadline for virtual participation is May 5, 2023.  Zoom details for this 
workshop will be sent with notifications of acceptance.
The S2C2 is supported by the National Institutes of Health Common Fund 
Transformative High Resolution Cryo-Electron 
Microscopy
 program.




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Re: [ccp4bb] 2022 S2C2 High Resolution CryoET Image Processing Virtual Workshop March 1-3, 2022 8:00 AM - 2:00 PM (PST)

2022-02-14 Thread Polizzi, JoAnn 
Good morning All,

With two weeks left until our 2022 S2C2 High Resolution CryoET Image Processing 
Workshop, I wanted to send a reminder that if you have not done so yet please 
fill in an application for the workshop.  I will close the registration site 
down on February 19, to complete the processing of our applicants.  The 
workshop page link with more information and registration page can be found 
below.

Best,
JoAnn

From: Polizzi, JoAnn 
Sent: Wednesday, January 19, 2022 11:01 AM
To: 3...@ncmir.ucsd.edu; cc...@jiscmail.ac.uk; CCP4BB@JISCMAIL.AC.UK; 
cryoem-announce 
Cc: Polizzi, JoAnn 
Subject: 2022 S2C2 High Resolution CryoET Image Processing Virtual Workshop 
March 1-3, 2022 8:00 AM - 2:00 PM (PST)

Dear CryoEM Community,

We are pleased to announce that we will be hosting a 3-day virtual workshop on 
High Resolution CryoET Image Processing on March 1-3, 2022. The expert speakers 
will lecture on the basic principles and practical usage of software for image 
processing and analysis of high resolution cryoET data.

Our list of speakers includes David DeRosier, Frederick Sigworth, Tom Goddard, 
Steven Ludtke, Dimitry Tegunov.
For more information and the registration link, please go to our S2C2 CryoEM 
Workshop<https://cryoem.slac.stanford.edu/s2c2/s%C2%B2c%C2%B2-cryoem-2021-workshop-zoom-only-participation>
 page.

Organizer: Wah Chiu, Stanford University

The S2C2 is supported by the National Institutes of Health Common Fund 
Transformative High Resolution Cryo-Electron 
Microscopy<https://commonfund.nih.gov/cryoem> program.



[cid:image002.png@01D82189.8559F150]
JoAnn Polizzi | Administrative Assistant, SSRL Directorate
Biosciences and CryoEM & Bioimaging Divisions
SLAC National Accelerator Laboratory | Menlo Park, CA
p: 650.926.3357 | m: 408.772.5379
e: joa...@slac.stanford.edu<mailto:joa...@slac.stanford.edu> | w: 
slac.stanford.edu<https://slac.stanford.edu/>

You can't go back and change the beginning but you can start where you are and 
change the ending.  James Sherman (Rejection, 1982)





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[ccp4bb] 2022 S2C2 High Resolution CryoET Image Processing Virtual Workshop March 1-3, 2022 8:00 AM - 2:00 PM (PST)

2022-01-19 Thread Polizzi, JoAnn 
Dear CryoEM Community,

We are pleased to announce that we will be hosting a 3-day virtual workshop on 
High Resolution CryoET Image Processing on March 1-3, 2022. The expert speakers 
will lecture on the basic principles and practical usage of software for image 
processing and analysis of high resolution cryoET data.

Our list of speakers includes David DeRosier, Frederick Sigworth, Tom Goddard, 
Steven Ludtke, Dimitry Tegunov.
For more information and the registration link, please go to our S2C2 CryoEM 
Workshop
 page.

Organizer: Wah Chiu, Stanford University

The S2C2 is supported by the National Institutes of Health Common Fund 
Transformative High Resolution Cryo-Electron 
Microscopy program.



[cid:image002.png@01D80D23.E63E03F0]
JoAnn Polizzi | Administrative Assistant, SSRL Directorate
Biosciences and CryoEM & Bioimaging Divisions
SLAC National Accelerator Laboratory | Menlo Park, CA
p: 650.926.3357 | m: 408.772.5379
e: joa...@slac.stanford.edu | w: slac.stanford.edu

You can't go back and change the beginning but you can start where you are and 
change the ending.  James Sherman (Rejection, 1982)





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