Re: [ccp4bb] Macports and Fink - failed building open source pymol on MacOS Catalina
Why not just use QTMG rather than Pymol? This is, after all, the _CCP4_ bulletin board… H > On 14 Jun 2020, at 23:56, Javier Gonzalez wrote: > > Thank you so much Vijaykumar and Kevin, it worked smoothly! > Best wishes, > Javier > > On Sun, Jun 14, 2020 at 5:04 PM Kevin Jin wrote: > My OS Version: Catalina 10.15.5; > > brew install brewsci/bio/pymol > > To verify, I just installed Pymol using brew 2 minutes ago. It works. > > On Sat, Jun 13, 2020 at 4:45 PM Javier Gonzalez wrote: > Hello, > I'm attempting to build pymol on a laptop running MacOS Catalina 10.15.5, > Processor 2.8GHz Quad-Core Intel i7, Graphics Intel Iris Pro 1536 MB > I downloaded the latest version of Xcode 11.1 > > I tried from Fink (fink install pymol-py27) and Macports (sudo port install > pymol), as indicated here: https://pymolwiki.org/index.php/MAC_Install > > Both scripts run to download all dependencies but at the end fail with > different messages (see below). Any ideas? Is it doable or am I just > following outdated instructions? > Thanks in advance! > Javier > > Fink: fails at compiling term-readkey-pm5184-2.37-1 > - > - > Failed: phase compiling: term-readkey-pm5184-2.37-1 failed > > Before reporting any errors, please run "fink selfupdate" and try again. > Also try using "fink configure" to set your maximum build jobs to 1 and > attempt to build the package again. > If you continue to have issues, please check to see if the FAQ on Fink's > website solves the problem. If not, ask on one (not both, please) of > these mailing lists: > > The Fink Users List > The Fink Beginners List , > > with a carbon copy to the maintainer: > > Christian Schaffner > > Note that this is preferable to emailing just the maintainer directly, > since most fink package maintainers do not have access to all possible > hardware and software configurations. > > Please try to include the complete error message in your report. This > generally consists of a compiler line starting with e.g. "gcc" or "g++" > followed by the actual error output from the compiler. > > Also include the following system information: > Package manager version: 0.45.1 > Distribution version: selfupdate-rsync Fri Jun 12 21:49:17 2020, 10.15, x86_64 > Trees: local/main stable/main > Xcode.app: 11.5 > Xcode command-line tools: 11.5.0.0.1.1588476445 > Max. Fink build jobs: 8 > - > - > Macports: apparently there is an issue with py38-pyqt5 > ---> Computing dependencies for pymol > The following dependencies will be installed: py38-pyqt5 > Continue? [Y/n]: > ---> Fetching archive for py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > https://packages.macports.org/py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > http://aus.us.packages.macports.org/macports/packages/py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > https://ywg.ca.packages.macports.org/mirror/macports/packages/py38-pyqt5 > ---> Building py38-pyqt5 > Error: Failed to build py38-pyqt5: command execution failed > Error: See > /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-pyqt5/py38-pyqt5/main.log > for details. > Error: Follow https://guide.macports.org/#project.tickets to report a bug. > Error: Processing of port pymol failed > - > - > -- > Dr. Javier M. González > Instituto de Bionanotecnología del NOA (INBIONATEC-CONICET) > Universidad Nacional de Santiago del Estero (UNSE) > RN9, Km 1125. Villa El Zanjón. (G4206XCP) > Santiago del Estero. Argentina > Tel: +54-(0385)-4238352 > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 > > > > -- > Kevin Jin > > Sharing knowledge each other is always very joyful.. > > Website: http://www.jinkai.org/ > > > > -- > Dr. Javier M. González > Instituto de Bionanotecnología del NOA (INBIONATEC-CONICET) > Universidad Nacional de Santiago del Estero (UNSE) > RN9, Km 1125. Villa El Zanjón. (G4206XCP) > Santiago del Estero. Argentina > Tel: +54-(0385)-4238352 > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 >
Re: [ccp4bb] Macports and Fink - failed building open source pymol on MacOS Catalina
Thank you so much Vijaykumar and Kevin, it worked smoothly! Best wishes, Javier On Sun, Jun 14, 2020 at 5:04 PM Kevin Jin wrote: > My OS Version: Catalina 10.15.5; > > brew install brewsci/bio/pymol > > To verify, I just installed Pymol using brew 2 minutes ago. It works. > > On Sat, Jun 13, 2020 at 4:45 PM Javier Gonzalez wrote: > >> Hello, >> I'm attempting to build pymol on a laptop running MacOS Catalina 10.15.5, >> Processor 2.8GHz Quad-Core Intel i7, Graphics Intel Iris Pro 1536 MB >> I downloaded the latest version of Xcode 11.1 >> >> I tried from Fink (fink install pymol-py27) and Macports (sudo port >> install pymol), as indicated here: >> https://pymolwiki.org/index.php/MAC_Install >> >> Both scripts run to download all dependencies but at the end fail with >> different messages (see below). Any ideas? Is it doable or am I just >> following outdated instructions? >> Thanks in advance! >> Javier >> >> Fink: fails at compiling term-readkey-pm5184-2.37-1 >> >> - >> >> - >> Failed: phase compiling: term-readkey-pm5184-2.37-1 failed >> >> Before reporting any errors, please run "fink selfupdate" and try again. >> Also try using "fink configure" to set your maximum build jobs to 1 and >> attempt to build the package again. >> If you continue to have issues, please check to see if the FAQ on Fink's >> website solves the problem. If not, ask on one (not both, please) of >> these mailing lists: >> >> The Fink Users List >> The Fink Beginners List , >> >> with a carbon copy to the maintainer: >> >> Christian Schaffner >> >> Note that this is preferable to emailing just the maintainer directly, >> since most fink package maintainers do not have access to all possible >> hardware and software configurations. >> >> Please try to include the complete error message in your report. This >> generally consists of a compiler line starting with e.g. "gcc" or "g++" >> followed by the actual error output from the compiler. >> >> Also include the following system information: >> Package manager version: 0.45.1 >> Distribution version: selfupdate-rsync Fri Jun 12 21:49:17 2020, 10.15, >> x86_64 >> Trees: local/main stable/main >> Xcode.app: 11.5 >> Xcode command-line tools: 11.5.0.0.1.1588476445 >> Max. Fink build jobs: 8 >> >> - >> >> - >> Macports: apparently there is an issue with py38-pyqt5 >> ---> Computing dependencies for pymol >> The following dependencies will be installed: py38-pyqt5 >> Continue? [Y/n]: >> ---> Fetching archive for py38-pyqt5 >> ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from >> https://packages.macports.org/py38-pyqt5 >> ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from >> http://aus.us.packages.macports.org/macports/packages/py38-pyqt5 >> ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from >> https://ywg.ca.packages.macports.org/mirror/macports/packages/py38-pyqt5 >> ---> Building py38-pyqt5 >> Error: Failed to build py38-pyqt5: command execution failed >> Error: See >> /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-pyqt5/py38-pyqt5/main.log >> for details. >> Error: Follow https://guide.macports.org/#project.tickets to report a >> bug. >> Error: Processing of port pymol failed >> >> - >> >> - >> -- >> Dr. Javier M. González >> Instituto de Bionanotecnología del NOA (INBIONATEC-CONICET) >> Universidad Nacional de Santiago del Estero (UNSE) >> RN9, Km 1125. Villa El Zanjón. (G4206XCP) >> Santiago del Estero. Argentina >> Tel: +54-(0385)-4238352 >> >> -- >> >> To unsubscribe from the CCP4BB list, click the following link: >> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 >> > > > -- > Kevin Jin > > Sharing knowledge each other is always very joyful.. > > Website: http://www.jinkai.org/ > > -- Dr. Javier M. González Instituto de Bionanotecnología del NOA (INBIONATEC-CONICET) Universidad Nacional de Santiago del Estero (UNSE) RN9, Km 1125. Villa El Zanjón. (G4206XCP) Santiago del Estero. Argentina Tel: +54-(0385)-4238352 To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 This message was issued to members of
Re: [ccp4bb] Macports and Fink - failed building open source pymol on MacOS Catalina
My OS Version: Catalina 10.15.5; brew install brewsci/bio/pymol To verify, I just installed Pymol using brew 2 minutes ago. It works. On Sat, Jun 13, 2020 at 4:45 PM Javier Gonzalez wrote: > Hello, > I'm attempting to build pymol on a laptop running MacOS Catalina 10.15.5, > Processor 2.8GHz Quad-Core Intel i7, Graphics Intel Iris Pro 1536 MB > I downloaded the latest version of Xcode 11.1 > > I tried from Fink (fink install pymol-py27) and Macports (sudo port > install pymol), as indicated here: > https://pymolwiki.org/index.php/MAC_Install > > Both scripts run to download all dependencies but at the end fail with > different messages (see below). Any ideas? Is it doable or am I just > following outdated instructions? > Thanks in advance! > Javier > > Fink: fails at compiling term-readkey-pm5184-2.37-1 > > - > > - > Failed: phase compiling: term-readkey-pm5184-2.37-1 failed > > Before reporting any errors, please run "fink selfupdate" and try again. > Also try using "fink configure" to set your maximum build jobs to 1 and > attempt to build the package again. > If you continue to have issues, please check to see if the FAQ on Fink's > website solves the problem. If not, ask on one (not both, please) of > these mailing lists: > > The Fink Users List > The Fink Beginners List , > > with a carbon copy to the maintainer: > > Christian Schaffner > > Note that this is preferable to emailing just the maintainer directly, > since most fink package maintainers do not have access to all possible > hardware and software configurations. > > Please try to include the complete error message in your report. This > generally consists of a compiler line starting with e.g. "gcc" or "g++" > followed by the actual error output from the compiler. > > Also include the following system information: > Package manager version: 0.45.1 > Distribution version: selfupdate-rsync Fri Jun 12 21:49:17 2020, 10.15, > x86_64 > Trees: local/main stable/main > Xcode.app: 11.5 > Xcode command-line tools: 11.5.0.0.1.1588476445 > Max. Fink build jobs: 8 > > - > > - > Macports: apparently there is an issue with py38-pyqt5 > ---> Computing dependencies for pymol > The following dependencies will be installed: py38-pyqt5 > Continue? [Y/n]: > ---> Fetching archive for py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > https://packages.macports.org/py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > http://aus.us.packages.macports.org/macports/packages/py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > https://ywg.ca.packages.macports.org/mirror/macports/packages/py38-pyqt5 > ---> Building py38-pyqt5 > Error: Failed to build py38-pyqt5: command execution failed > Error: See > /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-pyqt5/py38-pyqt5/main.log > for details. > Error: Follow https://guide.macports.org/#project.tickets to report a bug. > Error: Processing of port pymol failed > > - > > - > -- > Dr. Javier M. González > Instituto de Bionanotecnología del NOA (INBIONATEC-CONICET) > Universidad Nacional de Santiago del Estero (UNSE) > RN9, Km 1125. Villa El Zanjón. (G4206XCP) > Santiago del Estero. Argentina > Tel: +54-(0385)-4238352 > > -- > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 > -- Kevin Jin Sharing knowledge each other is always very joyful.. Website: http://www.jinkai.org/ To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
Re: [ccp4bb] [EXTERNAL] [ccp4bb] Macports and Fink - failed building open source pymol on MacOS Catalina
Hi Javier, Because this is an issue about open-source pymol, open an issue on the open-source GitHub site and report the problem https://github.com/schrodinger/pymol-open-source/issues Best regards, Blaine Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology College of Medicine University of Oklahoma Health Sciences Center S.L. Young Biomedical Research Center (BRC) Rm. 466 975 NE 10th Street, BRC 466 Oklahoma City, OK 73104-5419 From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Javier Gonzalez [bio...@gmail.com] Sent: Saturday, June 13, 2020 6:45 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [EXTERNAL] [ccp4bb] Macports and Fink - failed building open source pymol on MacOS Catalina Hello, I'm attempting to build pymol on a laptop running MacOS Catalina 10.15.5, Processor 2.8GHz Quad-Core Intel i7, Graphics Intel Iris Pro 1536 MB I downloaded the latest version of Xcode 11.1 I tried from Fink (fink install pymol-py27) and Macports (sudo port install pymol), as indicated here: https://pymolwiki.org/index.php/MAC_Install<https://urldefense.proofpoint.com/v2/url?u=https-3A__pymolwiki.org_index.php_MAC-5FInstall=DwMFaQ=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks=kT3F0qPZ7hI98b3h0YTHyCwS8vQy7JKxTnlsVitdb1w=B8hC_f0PMlJxXkzo7QpqvmuTlvPFET9myuMD5mUpUbU=> Both scripts run to download all dependencies but at the end fail with different messages (see below). Any ideas? Is it doable or am I just following outdated instructions? Thanks in advance! Javier Fink: fails at compiling term-readkey-pm5184-2.37-1 - - Failed: phase compiling: term-readkey-pm5184-2.37-1 failed Before reporting any errors, please run "fink selfupdate" and try again. Also try using "fink configure" to set your maximum build jobs to 1 and attempt to build the package again. If you continue to have issues, please check to see if the FAQ on Fink's website solves the problem. If not, ask on one (not both, please) of these mailing lists: The Fink Users List mailto:fink-us...@lists.sourceforge.net>> The Fink Beginners List mailto:fink-beginn...@lists.sourceforge.net>>, with a carbon copy to the maintainer: Christian Schaffner mailto:chri...@users.sourceforge.net>> Note that this is preferable to emailing just the maintainer directly, since most fink package maintainers do not have access to all possible hardware and software configurations. Please try to include the complete error message in your report. This generally consists of a compiler line starting with e.g. "gcc" or "g++" followed by the actual error output from the compiler. Also include the following system information: Package manager version: 0.45.1 Distribution version: selfupdate-rsync Fri Jun 12 21:49:17 2020, 10.15, x86_64 Trees: local/main stable/main Xcode.app<https://urldefense.proofpoint.com/v2/url?u=http-3A__Xcode.app=DwQFaQ=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks=kT3F0qPZ7hI98b3h0YTHyCwS8vQy7JKxTnlsVitdb1w=pJ2WMWnX2YbGmVykOgsCdk15IJcJiGHSbScNq2RIdqM=>: 11.5 Xcode command-line tools: 11.5.0.0.1.1588476445 Max. Fink build jobs: 8 - - Macports: apparently there is an issue with py38-pyqt5 ---> Computing dependencies for pymol The following dependencies will be installed: py38-pyqt5 Continue? [Y/n]: ---> Fetching archive for py38-pyqt5 ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from https://packages.macports.org/py38-pyqt5<https://urldefense.proofpoint.com/v2/url?u=https-3A__packages.macports.org_py38-2Dpyqt5=DwMFaQ=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks=kT3F0qPZ7hI98b3h0YTHyCwS8vQy7JKxTnlsVitdb1w=HXzceoCE4NrXw7l9SeGxEVG84RWS0KqIElfV_kw0Grk=> ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from http://aus.us.packages.macports.org/macports/packages/py38-pyqt5<https://urldefense.proofpoint.com/v2/url?u=http-3A__aus.us.packages.macports.org_macports_packages_py38-2Dpyqt5=DwMFaQ=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks=kT3F0qPZ7hI98b3h0YTHyCwS8vQy7JKxTnlsVitdb1w=EMr3UPpvA_kadqXDAsDvRVJJuzPCPswslDML4vft2SQ=> ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from https://ywg.ca.packages.macports.org/mirror/macports/packages/py38-pyqt5<https://urldefense.proofpoint.com/v2/url?u=https-3A__ywg.ca.packages.m
Re: [ccp4bb] Macports and Fink - failed building open source pymol on MacOS Catalina
Dear Javier, It might be better to ask in the pymol mailing list. See info here: https://www.mail-archive.com/pymol-users@lists.sourceforge.net/info.html вс, 14 июн. 2020 г. в 01:45, Javier Gonzalez : > Hello, > I'm attempting to build pymol on a laptop running MacOS Catalina 10.15.5, > Processor 2.8GHz Quad-Core Intel i7, Graphics Intel Iris Pro 1536 MB > I downloaded the latest version of Xcode 11.1 > > I tried from Fink (fink install pymol-py27) and Macports (sudo port > install pymol), as indicated here: > https://pymolwiki.org/index.php/MAC_Install > > Both scripts run to download all dependencies but at the end fail with > different messages (see below). Any ideas? Is it doable or am I just > following outdated instructions? > Thanks in advance! > Javier > > Fink: fails at compiling term-readkey-pm5184-2.37-1 > > - > > - > Failed: phase compiling: term-readkey-pm5184-2.37-1 failed > > Before reporting any errors, please run "fink selfupdate" and try again. > Also try using "fink configure" to set your maximum build jobs to 1 and > attempt to build the package again. > If you continue to have issues, please check to see if the FAQ on Fink's > website solves the problem. If not, ask on one (not both, please) of > these mailing lists: > > The Fink Users List > The Fink Beginners List , > > with a carbon copy to the maintainer: > > Christian Schaffner > > Note that this is preferable to emailing just the maintainer directly, > since most fink package maintainers do not have access to all possible > hardware and software configurations. > > Please try to include the complete error message in your report. This > generally consists of a compiler line starting with e.g. "gcc" or "g++" > followed by the actual error output from the compiler. > > Also include the following system information: > Package manager version: 0.45.1 > Distribution version: selfupdate-rsync Fri Jun 12 21:49:17 2020, 10.15, > x86_64 > Trees: local/main stable/main > Xcode.app: 11.5 > Xcode command-line tools: 11.5.0.0.1.1588476445 > Max. Fink build jobs: 8 > > - > > - > Macports: apparently there is an issue with py38-pyqt5 > ---> Computing dependencies for pymol > The following dependencies will be installed: py38-pyqt5 > Continue? [Y/n]: > ---> Fetching archive for py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > https://packages.macports.org/py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > http://aus.us.packages.macports.org/macports/packages/py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > https://ywg.ca.packages.macports.org/mirror/macports/packages/py38-pyqt5 > ---> Building py38-pyqt5 > Error: Failed to build py38-pyqt5: command execution failed > Error: See > /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-pyqt5/py38-pyqt5/main.log > for details. > Error: Follow https://guide.macports.org/#project.tickets to report a bug. > Error: Processing of port pymol failed > > - > > - > -- > Dr. Javier M. González > Instituto de Bionanotecnología del NOA (INBIONATEC-CONICET) > Universidad Nacional de Santiago del Estero (UNSE) > RN9, Km 1125. Villa El Zanjón. (G4206XCP) > Santiago del Estero. Argentina > Tel: +54-(0385)-4238352 > > -- > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 > -- Evgenii Osipov Laboratory for Biocrystallography, Department of Pharmaceutical Sciences, KU Leuven O To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
[ccp4bb] Macports and Fink - failed building open source pymol on MacOS Catalina
Hello, I'm attempting to build pymol on a laptop running MacOS Catalina 10.15.5, Processor 2.8GHz Quad-Core Intel i7, Graphics Intel Iris Pro 1536 MB I downloaded the latest version of Xcode 11.1 I tried from Fink (fink install pymol-py27) and Macports (sudo port install pymol), as indicated here: https://pymolwiki.org/index.php/MAC_Install Both scripts run to download all dependencies but at the end fail with different messages (see below). Any ideas? Is it doable or am I just following outdated instructions? Thanks in advance! Javier Fink: fails at compiling term-readkey-pm5184-2.37-1 - - Failed: phase compiling: term-readkey-pm5184-2.37-1 failed Before reporting any errors, please run "fink selfupdate" and try again. Also try using "fink configure" to set your maximum build jobs to 1 and attempt to build the package again. If you continue to have issues, please check to see if the FAQ on Fink's website solves the problem. If not, ask on one (not both, please) of these mailing lists: The Fink Users List The Fink Beginners List , with a carbon copy to the maintainer: Christian Schaffner Note that this is preferable to emailing just the maintainer directly, since most fink package maintainers do not have access to all possible hardware and software configurations. Please try to include the complete error message in your report. This generally consists of a compiler line starting with e.g. "gcc" or "g++" followed by the actual error output from the compiler. Also include the following system information: Package manager version: 0.45.1 Distribution version: selfupdate-rsync Fri Jun 12 21:49:17 2020, 10.15, x86_64 Trees: local/main stable/main Xcode.app: 11.5 Xcode command-line tools: 11.5.0.0.1.1588476445 Max. Fink build jobs: 8 - - Macports: apparently there is an issue with py38-pyqt5 ---> Computing dependencies for pymol The following dependencies will be installed: py38-pyqt5 Continue? [Y/n]: ---> Fetching archive for py38-pyqt5 ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from https://packages.macports.org/py38-pyqt5 ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from http://aus.us.packages.macports.org/macports/packages/py38-pyqt5 ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from https://ywg.ca.packages.macports.org/mirror/macports/packages/py38-pyqt5 ---> Building py38-pyqt5 Error: Failed to build py38-pyqt5: command execution failed Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-pyqt5/py38-pyqt5/main.log for details. Error: Follow https://guide.macports.org/#project.tickets to report a bug. Error: Processing of port pymol failed - - -- Dr. Javier M. González Instituto de Bionanotecnología del NOA (INBIONATEC-CONICET) Universidad Nacional de Santiago del Estero (UNSE) RN9, Km 1125. Villa El Zanjón. (G4206XCP) Santiago del Estero. Argentina Tel: +54-(0385)-4238352 To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
