Re: [ccp4bb] Question for those who use AutoSharp via CCP4i on MacOSX Yosemite
I’ll add to this that you should also set the relevant path in launchd.conf as well to access other external programs (SHELXC/D/E) when opening ccp4i via the Finder/Spotlight. setenv PATH /where/ever/shelx Cheers, Aaron -- Dr. Aaron Finke Postdoctoral Fellow Swiss Light Source WSLA/217 CH-5232 Villigen-PSI phone: +41 56 310 5652 e-mail: aaron.fi...@psi.chmailto:aaron.fi...@psi.ch On May 5, 2015, at 11:00, Finke Aaron (PSI) aaron.fi...@psi.chmailto:aaron.fi...@psi.ch wrote: Dear Mark, Indeed there is a way. You have to set the environment variable so that all Mac apps can access it. This is most easily done via launchd. In the Terminal, type ‘sudo vi /etc/launchd.conf’ and add the following text (the file will likely be blank): setenv SHARP_home /where/ever/SHARP/ Save, and reboot. Now when you access ccp4i in a Finder window or Spotlight, autoSHARP should be accessible. More info can be found here: http://stackoverflow.com/questions/135688/setting-environment-variables-in-os-x/3756686#3756686 I hope this works for you. (It worked for me.) Cheers, Aaron -- Dr. Aaron Finke Postdoctoral Fellow Swiss Light Source WSLA/217 CH-5232 Villigen-PSI phone: +41 56 310 5652 e-mail: aaron.fi...@psi.chmailto:aaron.fi...@psi.ch On May 5, 2015, at 1:17, Mark J van Raaij mjvanra...@cnb.csic.esmailto:mjvanra...@cnb.csic.es wrote: Dear All, when starting CCP4i via the icon, AutoSharp remains greyed out, suggesting it is not installed. However, when I start CCP4i in an XQuartz window (i.e. “ccp4i ”), AutoSharp can be run. I guess this may be because in first way my “.profile” file is not read, any ideas how to fix this? Greetings, Mark J van Raaij mjvanra...@cnb.csic.esmailto:mjvanra...@cnb.csic.es http://www.cnb.csic.es/~mjvanraaij
Re: [ccp4bb] Question for those who use AutoSharp via CCP4i on MacOSX Yosemite
Dear Mark, Indeed there is a way. You have to set the environment variable so that all Mac apps can access it. This is most easily done via launchd. In the Terminal, type ‘sudo vi /etc/launchd.conf’ and add the following text (the file will likely be blank): setenv SHARP_home /where/ever/SHARP/ Save, and reboot. Now when you access ccp4i in a Finder window or Spotlight, autoSHARP should be accessible. More info can be found here: http://stackoverflow.com/questions/135688/setting-environment-variables-in-os-x/3756686#3756686 I hope this works for you. (It worked for me.) Cheers, Aaron -- Dr. Aaron Finke Postdoctoral Fellow Swiss Light Source WSLA/217 CH-5232 Villigen-PSI phone: +41 56 310 5652 e-mail: aaron.fi...@psi.chmailto:aaron.fi...@psi.ch On May 5, 2015, at 1:17, Mark J van Raaij mjvanra...@cnb.csic.esmailto:mjvanra...@cnb.csic.es wrote: Dear All, when starting CCP4i via the icon, AutoSharp remains greyed out, suggesting it is not installed. However, when I start CCP4i in an XQuartz window (i.e. “ccp4i ”), AutoSharp can be run. I guess this may be because in first way my “.profile” file is not read, any ideas how to fix this? Greetings, Mark J van Raaij mjvanra...@cnb.csic.esmailto:mjvanra...@cnb.csic.es http://www.cnb.csic.es/~mjvanraaij
[ccp4bb] Question for those who use AutoSharp via CCP4i on MacOSX Yosemite
Dear All, when starting CCP4i via the icon, AutoSharp remains greyed out, suggesting it is not installed. However, when I start CCP4i in an XQuartz window (i.e. “ccp4i ”), AutoSharp can be run. I guess this may be because in first way my “.profile” file is not read, any ideas how to fix this? Greetings, Mark J van Raaij mjvanra...@cnb.csic.es mailto:mjvanra...@cnb.csic.es http://www.cnb.csic.es/~mjvanraaij http://www.cnb.csic.es/~mjvanraaij
