[ccp4bb] crystallization analysis software

2012-05-23 Thread Ed Pozharski
Does anyone know of a (non-commercial) software that can analyze results
of a crystallization screen?  What I am looking for is some way to tell
what components/factors favor protein solubility/precipitation based on
binary input (clear drop/precipitate).

I did some googling, but please feel free to use lmgtfy on me :)

Cheers,

Ed.


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After much deep and profound brain things inside my head, 
I have decided to thank you for bringing peace to our home.
Julian, King of Lemurs


Re: [ccp4bb] crystallization analysis software

2012-05-23 Thread Prince, D Bryan
Ed,

I looked into this a number of years ago, and remember the following papers. I 
did not actually use any of the databases described due to IT issues at the 
time. I hope this helps.

Kind regards,
Bryan

LISA: an intranet-based flexible database for protein crystallography project 
management
http://scripts.iucr.org/cgi-bin/paper?S0907444901009295


HalX: an open-source LIMS (Laboratory Information Management System) for small- 
to large-scale laboratories
http://scripts.iucr.org/cgi-bin/paper?S0907444905001290

Xtrack - a web-based crystallographic notebook
http://scripts.iucr.org/cgi-bin/paper?S0907444902012696

CLIMS: Crystallography Laboratory Information Management System
http://scripts.iucr.org/cgi-bin/paper?za5055

These I found while looking up the others.

MOLE: A data management application based on a protein production data model
http://onlinelibrary.wiley.com/doi/10.1002/prot.20291/full

Design of a data model for developing laboratory information management and 
analysis systems for protein production
http://onlinelibrary.wiley.com/doi/10.1002/prot.20303/full

The Protein Information Management System (PiMS): a generic tool for any 
structural biology research laboratory
http://scripts.iucr.org/cgi-bin/paper?S0907444911007943




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-Original Message-
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Ed 
Pozharski
Sent: Wednesday, May 23, 2012 12:24 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] crystallization analysis software

Does anyone know of a (non-commercial) software that can analyze results
of a crystallization screen?  What I am looking for is some way to tell
what components/factors favor protein solubility/precipitation based on
binary input (clear drop/precipitate).

I did some googling, but please feel free to use lmgtfy on me :)

Cheers,

Ed.


--
After much deep and profound brain things inside my head,
I have decided to thank you for bringing peace to our home.
Julian, King of Lemurs