Re: [ccp4bb] qtrview command line options
Wonderful, thanks very much to all the CCP4 team ! [ I have met users who object to command lines and terminals and no-clicking, for them if it's not in the GUI it's yuk but I guess that you can't have everything :-) ] Fred. On 16/03/13 22:16, andrey.lebe...@stfc.ac.uk wrote: After ccp4 update No 19, Log–files can be opened with qtrview from the command line: logview name.log This also works for log-files generated with quick scale and quick symmetry from imosflm. If ccp4 database entries do not exist, input and output files will not be shown in the viewer (except for quick scale and quick symmetry files). Regards Andrey On 11 Mar 2013, at 20:06, Lebedev, Andrey (STFC,RAL,SC) wrote: Hi Ed Thank you for the suggestion. We are looking into this and hopefully will provide a solution soon. Regards Andrey On 11 Mar 2013, at 14:26, Ed Pozharski wrote: Is there some way of opening a log file (specifically, the pointandscale.log that imosflm bridge to scala generates) with qtrview from command line? I tried, of course, this qtrview pointandscale.log but it opens empty, no log-file. I tried qtrview -h and qtrview --help and man qtrview but there is seemingly no documentation. I found the source code (yes, I can google) and can deduce that available options at startup are --log-file --report-xml --report-xrt --inp-file The only thing that works is qrtview --log-file pointandscale.log but that only shows me the log-file itself, i.e. no graphs etc. I understand that the program was designed primarily for ccp4 gui and I know loggraph (and it works). By the way, checkout instructions for the qtrview repository at https://fg.oisin.rc-harwell.ac.uk/projects/qtrview/ don't work throwing this error bzr: ERROR: Connection error: curl connection error (server certificate verification failed. CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none) on https://fg.oisin.rc-harwell.ac.uk/anonscm/bzr/qtrview/.bzr/smart Cheers, Ed. -- Hurry up before we all come back to our senses! Julian, King of Lemurs -- Fred. Vellieux (B.Sc., Ph.D., hdr) ouvrier de la recherche IBS / ELMA 41 rue Jules Horowitz F-38027 Grenoble Cedex 01 Tel: +33 438789605 Fax: +33 438785494
Re: [ccp4bb] qtrview command line options
After ccp4 update No 19, Log–files can be opened with qtrview from the command line: logview name.log This also works for log-files generated with quick scale and quick symmetry from imosflm. If ccp4 database entries do not exist, input and output files will not be shown in the viewer (except for quick scale and quick symmetry files). Regards Andrey On 11 Mar 2013, at 20:06, Lebedev, Andrey (STFC,RAL,SC) wrote: Hi Ed Thank you for the suggestion. We are looking into this and hopefully will provide a solution soon. Regards Andrey On 11 Mar 2013, at 14:26, Ed Pozharski wrote: Is there some way of opening a log file (specifically, the pointandscale.log that imosflm bridge to scala generates) with qtrview from command line? I tried, of course, this qtrview pointandscale.log but it opens empty, no log-file. I tried qtrview -h and qtrview --help and man qtrview but there is seemingly no documentation. I found the source code (yes, I can google) and can deduce that available options at startup are --log-file --report-xml --report-xrt --inp-file The only thing that works is qrtview --log-file pointandscale.log but that only shows me the log-file itself, i.e. no graphs etc. I understand that the program was designed primarily for ccp4 gui and I know loggraph (and it works). By the way, checkout instructions for the qtrview repository at https://fg.oisin.rc-harwell.ac.uk/projects/qtrview/ don't work throwing this error bzr: ERROR: Connection error: curl connection error (server certificate verification failed. CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none) on https://fg.oisin.rc-harwell.ac.uk/anonscm/bzr/qtrview/.bzr/smart Cheers, Ed. -- Hurry up before we all come back to our senses! Julian, King of Lemurs -- Scanned by iCritical.
[ccp4bb] qtrview command line options
Is there some way of opening a log file (specifically, the pointandscale.log that imosflm bridge to scala generates) with qtrview from command line? I tried, of course, this qtrview pointandscale.log but it opens empty, no log-file. I tried qtrview -h and qtrview --help and man qtrview but there is seemingly no documentation. I found the source code (yes, I can google) and can deduce that available options at startup are --log-file --report-xml --report-xrt --inp-file The only thing that works is qrtview --log-file pointandscale.log but that only shows me the log-file itself, i.e. no graphs etc. I understand that the program was designed primarily for ccp4 gui and I know loggraph (and it works). By the way, checkout instructions for the qtrview repository at https://fg.oisin.rc-harwell.ac.uk/projects/qtrview/ don't work throwing this error bzr: ERROR: Connection error: curl connection error (server certificate verification failed. CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none) on https://fg.oisin.rc-harwell.ac.uk/anonscm/bzr/qtrview/.bzr/smart Cheers, Ed. -- Hurry up before we all come back to our senses! Julian, King of Lemurs
Re: [ccp4bb] qtrview command line options
Hi Ed Thank you for the suggestion. We are looking into this and hopefully will provide a solution soon. Regards Andrey On 11 Mar 2013, at 14:26, Ed Pozharski wrote: Is there some way of opening a log file (specifically, the pointandscale.log that imosflm bridge to scala generates) with qtrview from command line? I tried, of course, this qtrview pointandscale.log but it opens empty, no log-file. I tried qtrview -h and qtrview --help and man qtrview but there is seemingly no documentation. I found the source code (yes, I can google) and can deduce that available options at startup are --log-file --report-xml --report-xrt --inp-file The only thing that works is qrtview --log-file pointandscale.log but that only shows me the log-file itself, i.e. no graphs etc. I understand that the program was designed primarily for ccp4 gui and I know loggraph (and it works). By the way, checkout instructions for the qtrview repository at https://fg.oisin.rc-harwell.ac.uk/projects/qtrview/ don't work throwing this error bzr: ERROR: Connection error: curl connection error (server certificate verification failed. CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none) on https://fg.oisin.rc-harwell.ac.uk/anonscm/bzr/qtrview/.bzr/smart Cheers, Ed. -- Hurry up before we all come back to our senses! Julian, King of Lemurs -- Scanned by iCritical.
