Re: [Cdk-user] lots of debug output when using CDK 2.2-SNAPSHOT

2018-08-06 Thread Rajarshi Guha
Thanks - that does make the debug output problem go away.


On Mon, Aug 6, 2018 at 10:30 AM John Mayfield 
wrote:

> I've removed *cdk-log4j* from the bundle, see if that has any impact.
>
> https://github.com/cdk/cdk/commit/6af1ad94638dc11874fa85006302b92a786f5d7b
>
> On Mon, 6 Aug 2018 at 08:24, John Mayfield 
> wrote:
>
>> The output is coming from *DynamicFactory*, are you including log4j on
>> your classpath (watch out for cdk-bundle), if so make sure it picks up your
>> config and not one from another project (e.g. jena/jni-inchi). You can
>> either exclude *log4j* or configure it to suite your needs.
>>
>> On Sat, 4 Aug 2018 at 05:38, Rajarshi Guha 
>> wrote:
>>
>>> Hi, I was rebuilding the rcdk version with the latest CDK
>>> (2.2-SNAPSHOT). On loading the R package, I'm seeing a lot of DEBUG output
>>> of the form
>>>
>>> 41   [main] DEBUG org.openscience.cdk.DynamicFactory  - registered
>>> 'IChemModel' with 'ChemModel' implementation
>>>
>>> Given that the R code is just making some calls to constructors, I' not
>>> sure where this output is coming from.
>>>
>>> Any suggestions on how to suppress it?
>>>
>>>
>>> --
>>> Rajarshi Guha | http://blog.rguha.net | @rguha
>>> 
>>>
>>>
>>> --
>>> Check out the vibrant tech community on one of the world's most
>>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>>> ___
>>> Cdk-user mailing list
>>> Cdk-user@lists.sourceforge.net
>>> https://lists.sourceforge.net/lists/listinfo/cdk-user
>>>
>>

-- 
Rajarshi Guha | http://blog.rguha.net | @rguha 
--
Check out the vibrant tech community on one of the world's most
engaging tech sites, Slashdot.org! http://sdm.link/slashdot___
Cdk-user mailing list
Cdk-user@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/cdk-user


Re: [Cdk-user] lots of debug output when using CDK 2.2-SNAPSHOT

2018-08-06 Thread John Mayfield
I've removed *cdk-log4j* from the bundle, see if that has any impact.

https://github.com/cdk/cdk/commit/6af1ad94638dc11874fa85006302b92a786f5d7b

On Mon, 6 Aug 2018 at 08:24, John Mayfield 
wrote:

> The output is coming from *DynamicFactory*, are you including log4j on
> your classpath (watch out for cdk-bundle), if so make sure it picks up your
> config and not one from another project (e.g. jena/jni-inchi). You can
> either exclude *log4j* or configure it to suite your needs.
>
> On Sat, 4 Aug 2018 at 05:38, Rajarshi Guha 
> wrote:
>
>> Hi, I was rebuilding the rcdk version with the latest CDK (2.2-SNAPSHOT).
>> On loading the R package, I'm seeing a lot of DEBUG output of the form
>>
>> 41   [main] DEBUG org.openscience.cdk.DynamicFactory  - registered
>> 'IChemModel' with 'ChemModel' implementation
>>
>> Given that the R code is just making some calls to constructors, I' not
>> sure where this output is coming from.
>>
>> Any suggestions on how to suppress it?
>>
>>
>> --
>> Rajarshi Guha | http://blog.rguha.net | @rguha
>> 
>>
>>
>> --
>> Check out the vibrant tech community on one of the world's most
>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>> ___
>> Cdk-user mailing list
>> Cdk-user@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/cdk-user
>>
>
--
Check out the vibrant tech community on one of the world's most
engaging tech sites, Slashdot.org! http://sdm.link/slashdot___
Cdk-user mailing list
Cdk-user@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/cdk-user


Re: [Cdk-user] lots of debug output when using CDK 2.2-SNAPSHOT

2018-08-06 Thread John Mayfield
The output is coming from *DynamicFactory*, are you including log4j on your
classpath (watch out for cdk-bundle), if so make sure it picks up your
config and not one from another project (e.g. jena/jni-inchi). You can
either exclude *log4j* or configure it to suite your needs.

On Sat, 4 Aug 2018 at 05:38, Rajarshi Guha  wrote:

> Hi, I was rebuilding the rcdk version with the latest CDK (2.2-SNAPSHOT).
> On loading the R package, I'm seeing a lot of DEBUG output of the form
>
> 41   [main] DEBUG org.openscience.cdk.DynamicFactory  - registered
> 'IChemModel' with 'ChemModel' implementation
>
> Given that the R code is just making some calls to constructors, I' not
> sure where this output is coming from.
>
> Any suggestions on how to suppress it?
>
>
> --
> Rajarshi Guha | http://blog.rguha.net | @rguha 
>
>
> --
> Check out the vibrant tech community on one of the world's most
> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
> ___
> Cdk-user mailing list
> Cdk-user@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/cdk-user
>
--
Check out the vibrant tech community on one of the world's most
engaging tech sites, Slashdot.org! http://sdm.link/slashdot___
Cdk-user mailing list
Cdk-user@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/cdk-user