[cellml-discussion] ABI CellML Meeting Minutes, 19th October 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/10.19 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] CellML editorial board election results
The election of the CellML editorial board has concluded, and the following members have been elected for the following initial terms: 1: David Nickerson - 3 years 2: Poul Nielsen - 3 years 3: Alan Garny - 2 years 4: Jonathan Cooper - 2 years 5: Edmund Crampin - 1 year Subsequent annual elections will replace those whose terms are completed, and will be for 3 year terms. Thanks to all the nominees and those who participated by voting. Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 12th October 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/10.12 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] Election of CellML Editorial Board
This email is the final reminder about the current election for the CellML Editorial Board. Details of the election and information about the candidates can be found on the CellML website: http://www.cellml.org/about/news/editorialboardelection Voting has now been open for nearly two weeks, and will be be closed tomorrow. We would like to encourage anyone with an interest in CellML to read about the candidates and place a vote. Thanks to all those who have voted so far. The results of the election will be made available soon. Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 5th October 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/10.05 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 28th September 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/09.28 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Election of CellML Editorial Board
This email is to announce the election of the CellML editorial board. The elected members will have responsibility to encourage and facilitate discussion about development of the CellML standard. The list of nominees to the board is shown at the end of this email, and can also be found on the CellML website at: http://www.cellml.org/community/boardnominees Voting is open to all members of the CellML discussion mailing list. You can cast your vote(s) using an on-line form, available here: http://www.surveymonkey.com/s/VQ96KBC The elected board will consist of the 5 top ranked nominees. The top two ranked members will be elected for a three year term, the next two for a two year term, and the fifth member for a one year term. Members subsequently elected to replace these members will all have three year terms. We are using an STV voting system, details of which are explained on the ballot form. Simply rank as few or as many candidates as you wish in order of your preference. In order to ensure all votes come from valid members of the CellML discussion list, the form requires that you enter the email you use to subscribe to this list. If you make a mistake with your voting and I receive another vote from the same address, don't worry - I'll just get in touch with you directly to make sure this was your intention and to clarify any corrections. We would like to encourage everyone with any interest in CellML to participate by taking a look at the list of nominees and voting. Cheers, Dougal List of Nominees Randall Britten - My background is applied mathematics and professional software development. I have been involved with the CellML project since 2007, leading the Bioengineering Software Development Group at the ABI, which participates in the development of the CellML repository, CellML API and CellML specification, and previously OpenCell. This group also participates in related Physiome projects: PMR2, FieldML, OpenCMISS, cmgui and the Cardiac Atlas Project. I continue to participate very directly in each of these projects. I believe in giving attention to user requirements and valuing feedback from users; building a highly capable development team and fostering teamwork and community collaboration. Email: r.brit...@auckland.ac.nz. Jonathan Cooper - Jonathan's background is in computer science, software engineering, and computational biology. He has been developing tools supporting CellML since 2005, most notably the PyCml suite within Chaste. This incorporates strict validation of CellML 1.0, automatic units checking and conversion, and various optimisation methods for speeding model simulations. Jonathan is also working on functional curation solutions building on CellML. Edmund Crampin - Edmund is head of the Systems Biology Group at the Auckland Bioengineering Institute, which develops mathematical models of complex diseases including heart disease and dysfunction of saliva secretion. We are also using computational approaches to study the network of genetic interactions underlying cancers, in order to develop new gene-based prognostic tools. We are predominantly users of CellML rather than developers, and seek to represent the community of users on the CellML Board. Alan Garny - Alan's background is in computer science and cardiac electrophysiological modelling. His involvement with CellML goes back to its official release in August 2001. Alan is the author of COR, the first publicly available CellML environment. He was also involved in the development of OpenCell. He now leads the OpenCOR project which aim is to provide a replacement solution for both OpenCell and COR. Steve McKeever - Steve comes from a computing science background with a strong interest in the formal specification of programming languages and compilers. His interest in CellML is from the perspective of a language developer rather than a modeller. Hence he is interested in exploiting analysis and optimisation techniques from traditional software language development applied to physiological modelling scenarios. Andrew Miller - Andrew has been an active member of the CellML community since 2004, and has developed and maintained the CellML API from the commencement of that project, as well as participating in the development of a number of CellML language proposals. David Nickerson - David Andre Nickerson has been involved in CellML since its inception, with his Master's project providing the initial demonstration of the application of XML to physiological modelling. He continues to be an active participant in CellML, the model repository, and related projects and software developments. Steven Niederer Poul Nielsen - Poul is one of the original designers of CellML and has led the effort since its inception. In this role, he has instigated and overseen the development of many of the standards and tools associated with CellML.
[cellml-discussion] ABI CellML Meeting Minutes, 21st September 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/09.21 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 7th September 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/09.07 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 17th August, 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/08.17 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 10th August, 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/08.10 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 3rd August, 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/08.03 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Call for nominations: CellML editorial board - list of nominees
The list of those nominated for election to the CellML editorial board can be found on the following page, which will be updated as nominations are made and accepted. http://www.cellml.org/community/boardnominees Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 27th July, 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/07.27 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 1st June 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/06.01 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 25th May 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/05.25 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 18th May 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/05.18 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 4th May 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/05.04 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 13th April 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/04.13 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 30th March 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/03.30 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 16th March 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/03.16 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 2nd February 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/02.02 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] CellML-API user survey 2010-12
Hi This is another invitation to all current or potential CellML API users to participate in the CellML-API user survey, which will help us prioritise development and assess the processes used on the project. Even if you do not currently use the CellML-API, your feedback would be appreciated, so please take the time to participate. The following link displays the participant information sheet, as per the ethics approval requirements: http://tinyurl.com/cellmlsurvey201012 The link to the survey is at the bottom of the information sheet. Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 26th January 2011
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2011/01.26 Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5825 (20110127) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 8th December 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/12.08 Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5689 (20101209) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 1st December 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/12.01 Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5668 (20101202) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 24th November 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/11.24 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 10th November 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/11.10 Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 3rd November 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/11.03 Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5592 (20101104) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 27th October 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/10.27 Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5573 (20101028) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] Schematic diagram
On 14/10/2010 8:23 a.m., Catherine Lloyd wrote: Hi Felix We have a library of glyphs which can be downloaded for free from the model repository: http://models.cellml.org/workspace/sessionresources/ You need to click on manifest for the latest addition to the folder and you can download the glyphs from there. The latest glyph library is the one simply called Diagram Library.ai. The older ones with dates included in the file names were around before the library made it into Mercurial. Please let us know if you have any further questions (either concerning the images or CellML itself). One final thought - you need a licence to use Adobe Illustrator. I think there are alternative free software you can use (maybe Inkscape?). Again Dougal can confirm this. Inkscape can certainly be used to create these diagrams, and I will put a copy of the library into the workspace in SVG format to make this easier. Inkscape has historically been avoided for a couple of reasons. Inkscape's SVG output is more difficult to work with when creating interactive session files, and it is more laborious to add the ID tags to the SVG using Inkscape than it is with Illustrator. Inkscape also expands simple gradients out into a large number of objects, making the SVG files much bigger than they need to be. If the diagrams are not being used to make OpenCell SVG sessions, then these problems are not relevant. Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5529 (20101013) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] Schematic diagram
On 14/10/2010 8:49 a.m., Adam Reeve wrote: Hi Felix and Catherine I've used Inkscape a lot and it's great. It doesn't support the Adobe Illustrator file format very well though, I tried opening the glyph library in Inkscape and I only got part of a cell membrane. It would be nice if the glyph library was also available in SVG format for people without access to Adobe Illustrator. I have now uploaded an SVG version of the diagram library to the workspace. http://models.cellml.org/workspace/sessionresources The Illustrator library will probably remain the most up-to-date one, as all of the SVG session editing is still done in Illustrator. We will endeavor to update the SVG version every time changes are made to the library! Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5529 (20101013) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 29th September 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/09.29 Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5493 (20100930) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 22nd September 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/09.22 Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5474 (20100923) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 15th September 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/09.15 Cheers, Dougal __ Information from ESET Smart Security, version of virus signature database 5456 (20100916) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 4th August 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/08.11 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] ABI CellML Meeting Minutes, *11*th August 2010
On 13/08/2010 10:58, Dougal Cowan wrote: I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/08.11 It really is the minutes from the 11th... please disregard the previous subject line. Cheers, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 28th July 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/07.28 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 21st July 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/07.21 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 14th July 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/07.14 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 30th June 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/06.30 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 23rd June 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/06.23 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 9th June 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/06.09 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 2nd June 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/06.02 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 5th May 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/05.05 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 28th April 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/04.28 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting Minutes, 21st April 2010
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/04.21 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2010-04-07
I have put the minutes from yesterday's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/04.07 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2010-03-17
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/3.17 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2010-03-03
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/03.03 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2010-02-10
I have put the minutes from yesterday's CellML meeting up at: http://www.cellml.org/community/meeting/minutes/2010/02.10 Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2010-02-03
I have put the minutes from last week's CellML meeting up at: http://www.cellml.org/community/meeting/minutes/2010/02.03 My apologies for the delay this week. Thanks, Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] Announcement of OpenCell 0.7rc1
On 29/01/2010 10:55 p.m., Alan Garny wrote: I have never liked the PCEnv/OpenCell icon (it doesn't mean anything to me), but I guess that with 0.7 coming out soon, it's not the right time to think about new one, so only one comment: it feels like the bottom of the icon has been chopped off. It's even more obvious when looking at the 512px version (https://tracker.physiomeproject.org/attachment.cgi?id=449). If anything, I would like to suggest 'fixing' that? The chopped-off effect is my fault Alan, in my rush to make large icons I neglected to notice that the scaling of the drop shadow effect in illustrator is a bit quirky. I will fix these shortly. As for the icon itself, its meaning is simply a cell enclosed in angle brackets - that is, cell markup. I think the current icon at least has the benefit of being quite distinctive, but we could probably usefully think about a new one. Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] Announcement of OpenCell 0.7rc1
On 28/01/2010 12:00, David Brooks wrote: A small thing, but what about improving the resolution of the icon used for OpenCell? Compare OpenCell's icon with that of other applications in the attached screen image. I am attaching a set of PNGs: these are just higher resolution renders of the icon I made for the complete model structure tree view. For the time being, you can just replace the icon with one of these in order to make things (just a bit) less unsightly. Hopefully we can replace the rather prehistoric looking app icon at some point! Dougal attachment: OpenCell_16icon.pngattachment: OpenCell_32icon.pngattachment: OpenCell_64icon.png___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2010-01-27
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/0127 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2010-01-20
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2010/0120 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-12-16
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/12.16 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-12-09
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/12.09 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-12-02
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/12.02 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-11-25
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/11.25 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] ABI CellML meeting minutes 20091118
Alan Garny wrote: - Point 5.1 (Dougal has put up a page with CellML logos in various sizees and formats for publication purposes ): apart from a type (sizes rather than sizees), I noticed that if you click on the CellML logos link (http://www.cellml.org/community/about/cellmllogos), you do get a page with the logos (a welcome addition by the way!), the Community tab is highlighted while I believe the About CellML one should be. Also, if I go one level up (i.e. to the About CellML page), I can't see any mention of the CellML Logos page. I tried the different sub-pages (i.e. Contact us, Current development, etc.), but to no avail. So, this makes me wonder whether all the different web pages on the CellML website are linked to in some way or another, as opposed to having to know the exact link to get to a particular page (as seems to be the case with the logos page). I suspect that the word community has been spuriously added to the URL in the minutes. Unfortunately Plone does strange automatic things with incorrect URLs which mean that they work. Try the following sequence to get to the logos: * Go to www.cellml.org * Navigate to the About section through the nav-bar at the top * Click on CellML logos in the Navigation sidebar This should get you to the logos page with the About tab highlighted. I'm not sure that the logos page needs to be more visible than this - I suspect most people looking for logos will use the search function. But one certainly should be able to easily navigate to the page without using search. Dougal __ Information from ESET Smart Security, version of virus signature database 4622 (20091119) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] ABI CellML meeting minutes 20091118
Alan Garny wrote: Thanks for the steps. It did get me to the right place, so that's all good and sufficient indeed. I certainly didn't notice the Plone redirection. As for the Navigation sidebar, I had noticed it, but somehow assumed that it was there to remind me of recently visited pages (I guess that the word Navigation is what confused me here), and since I had indeed recently visited logos... The Navigation sidebar is a per-section navigational element that provides random-access to items within the current section. This might not be obvious, and could perhaps do with some kind of clarification. As for Plone redirects, one can really get quite silly with them. For example; http://www.cellml.org/tools/tools/index/index/getting-started/specifications/index/community/tools/about/cellmllogos I feel this is actually quite unhelpful, and it breaks the navbar, as we have seen! Comments on the usability of the site are always welcome, as we are still actively working on it and we do want to make it as useful as possible. Dougal __ Information from ESET Smart Security, version of virus signature database 4622 (20091119) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-11-11
I have put the minutes from this Wednesday's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/11.11 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-10-28
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/10.28 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-10-21
I have put the minutes from Wednesday's CellML meeting up at: http://www.cellml.org/community/meeting/minutes/2009/10.21 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-10-14
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/10.14 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-09-30
I have put the minutes from this Wednesday's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/10.07 Dougal __ Information from ESET Smart Security, version of virus signature database 4488 (20091007) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-10-07
The subject was wrong, but the link was correct! Sorry. Dougal __ Information from ESET Smart Security, version of virus signature database 4488 (20091007) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-09-30
My apologies for the lateness of this announcement. I have put the minutes from last week's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/09.30 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML meeting minutes 2009-09-23
I have put the minutes from this week's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/09.23 Dougal __ Information from ESET Smart Security, version of virus signature database 4452 (20090924) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting minutes 2009-09-02
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/09.02 Dougal __ Information from ESET Smart Security, version of virus signature database 4392 (20090903) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting minutes 2009-08-05
I have put the minutes from last Wednesday's meeting up at: http://www.cellml.org/community/meeting/minutes/2009/08.05 Dougal __ Information from ESET Smart Security, version of virus signature database 4320 (20090809) __ The message was checked by ESET Smart Security. http://www.eset.com ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting minutes 2009-06-17
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-cellml-meeting-minutes-2009-06-17 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting minutes 2009-06-10
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-cellml-meeting-minutes-2009-06-10/ Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting minutes 2009-06-03
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-cellml-meeting-minutes-2009-06-03 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI CellML Meeting minutes 2009-05-27
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-cellml-meeting-minutes-2009-05-27/ Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI Meeting minutes 2009-05-13
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-05-13/ Dougal This message was sent using IMP, the Internet Messaging Program. ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI Meeting minutes 2009-05-06
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-05-06/ Dougal This message was sent using IMP, the Internet Messaging Program. ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI Meeting minutes 2009-04-22
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-04-22/ Dougal This message was sent using IMP, the Internet Messaging Program. ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI Meeting minutes 2009-04-15
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-04-15 Dougal This message was sent using IMP, the Internet Messaging Program. ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI Meeting minutes 2009-04-01
I have put the minutes from yesterday's meeting up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-04-01 Dougal This message was sent using IMP, the Internet Messaging Program. ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI Meeting minutes 2009-03-18
I have put the minutes from Wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-03-18/ Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI Meeting minutes 2009-03-11
I have put the minutes from yesterday's meeting up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-03-11 Dougal This message was sent using IMP, the Internet Messaging Program. ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] ABI Meeting minutes 2009-02-18
I have put the minutes for this wednesday's meeting up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-02-18 Thanks Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Meeting minutes 2009-02-04
The minutes for last week's meeting are up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-02-04/ Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Meeting minutes 2009-01-07
The minutes from last week's ABI CellML Team meeting are up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2009-01-07 Sorry these are a bit late. Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Meeting minutes 2008-11-26
The minutes from last week's ABI CellML Team meeting are up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2008-11-26 Dougal This message was sent using IMP, the Internet Messaging Program. ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Meeting minutes 2008-11-19
The minutes from last week's ABI CellML Team meeting are up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2008-11-19 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Meeting minutes 2008-11-05
The minutes from last week's ABI CellML Team meeting are up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2008-10-05 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Meeting minutes 2008-11-05
My apologies; there was an unfortunate mistake in the URL of the last email. The minutes from last week's ABI CellML Team meeting are up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2008-11-05 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Meeting minutes 2008-10-29
The minutes from last week's ABI CellML Team meeting are up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2008-10-29 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Meeting minutes 2008-10-15
To the correct list at last, we all hope; The minutes from last week's ABI CellML Team meeting are up at: http://www.cellml.org/meeting_minutes/abi-meeting-minutes-2008-10-15 Dougal ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
