Jenkins build is back to normal : cytoscape-3-impl #5580

[cytoscape . build . daemon]

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Build failed in Jenkins: cytoscape-3-impl #5579

[cytoscape . build . daemon]

See 

Changes:

[mikekucera] Sort by z-order in SpacialIndex2D and remove from ding.

--
[...truncated 3045 lines...]
[INFO] schemaFiles 
(calculated):[
[INFO] bindingFiles (calculated):[]
[INFO] xjcPluginArtifacts (resolved):[]
[INFO] xjcPluginFiles (resolved):[]
[INFO] xjcPluginURLs (resolved):[]
[INFO] episodeArtifacts (resolved):[]
[INFO] episodeFiles (resolved):[]
[INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1
 
generateDirectory=
 generatePackage=org.cytoscape.internal.io.networklist
 schemaLanguage=null
 
schemas=[
 bindings=[]
 plugins=[]
 catalogs=[]
 
catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@34555459
 readOnly=false
 extension=false
 strict=true
 verbose=true
 debugMode=false
 arguments=[-episode, 

Using java.util.ServiceLoader
[INFO] File 
[
 was changed since the last build.
[INFO] File 
[
 was changed since the last build.
[INFO] Checking up-to-date depends 
[[
 

[INFO] Checking up-to-date produces 
[[
 

 

 

[INFO] Depends timestamp [1,558,569,284,000], produces timestamp 
[1,560,716,799,000].
[INFO] Skipped XJC execution. Generated sources were up-to-date.
[WARNING] Failed to getClass for 
org.apache.maven.plugin.source.AggregatorSourceJarMojo
[INFO] 
[INFO] --- maven-source-plugin:2.4:aggregate (aggregate-source) @ 
viewmodel-impl-parent ---
[INFO] Building jar: 

[INFO] 
[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ 
viewmodel-impl-parent ---
[INFO] Installing 

 to 
/opt/tomcat-home/.m2/repository/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/viewmodel-impl-parent-3.8.0-SNAPSHOT.pom
[INFO] Installing 

 to 
/opt/tomcat-home/.m2/repository/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/viewmodel-impl-parent-3.8.0-SNAPSHOT-sources.jar
[INFO] 
[INFO] --- maven-deploy-plugin:2.7:deploy (default-deploy) @ 
viewmodel-impl-parent ---
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/maven-metadata.xml
Downloaded: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/maven-metadata.xml
 (831 B at 67.6 KB/sec)
Uploading: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/viewmodel-impl-parent-3.8.0-20190617.165549-401.pom
Uploaded: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/viewmodel-impl-parent-3.8.0-20190617.165549-401.pom
 (4 KB at 19.6 KB/sec)
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/viewmodel-impl-parent/maven-metadata.xml
Downloaded: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/viewmodel-impl-parent/maven-metadata.xml
 (394 B at 13.7 KB/sec)
Uploading: 

Jenkins build is back to normal : cytoscape-3-impl #5545

[cytoscape . build . daemon]

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Build failed in Jenkins: cytoscape-3-impl #5544

[cytoscape . build . daemon]

See 

Changes:

[mikekucera] Birds-eye-view renders only when content changes.

--
[...truncated 2812 lines...]
[INFO] readOnly:false
[INFO] extension:false
[INFO] strict:true
[INFO] writeCode:true
[INFO] verbose:true
[INFO] debug:false
[INFO] args:[]
[INFO] forceRegenerate:false
[INFO] removeOldOutput:false
[INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties]
[INFO] otherDepends:null
[INFO] 
episodeFile:
[INFO] episode:true
[INFO] 
classpathElements:[
[INFO] plugins:null
[INFO] episodes:null
[INFO] useDependenciesAsEpisodes:false
[INFO] xjcPlugins:null
[INFO] episodes:null
[INFO] schemaFiles 
(calculated):[
[INFO] bindingFiles (calculated):[]
[INFO] xjcPluginArtifacts (resolved):[]
[INFO] xjcPluginFiles (resolved):[]
[INFO] xjcPluginURLs (resolved):[]
[INFO] episodeArtifacts (resolved):[]
[INFO] episodeFiles (resolved):[]
[INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1
 
generateDirectory=
 generatePackage=org.cytoscape.internal.io.networklist
 schemaLanguage=null
 
schemas=[
 bindings=[]
 plugins=[]
 catalogs=[]
 
catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@69eb083e
 readOnly=false
 extension=false
 strict=true
 verbose=true
 debugMode=false
 arguments=[-episode, 

Using java.util.ServiceLoader
[INFO] File 
[
 was changed since the last build.
[INFO] File 
[
 was changed since the last build.
[INFO] Checking up-to-date depends 
[[
 

[INFO] Checking up-to-date produces 
[[
 

 

 

[INFO] Depends timestamp [1,558,569,284,000], produces timestamp 
[1,559,679,994,000].
[INFO] Skipped XJC execution. Generated sources were up-to-date.
[WARNING] Failed to getClass for 
org.apache.maven.plugin.source.AggregatorSourceJarMojo
[INFO] 
[INFO] --- maven-source-plugin:2.4:aggregate (aggregate-source) @ 
viewmodel-impl-parent ---
[INFO] Building jar: 

[INFO] 
[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ 
viewmodel-impl-parent ---
[INFO] Installing 

 to 
/opt/tomcat-home/.m2/repository/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/viewmodel-impl-parent-3.8.0-SNAPSHOT.pom
[INFO] Installing 

 to 
/opt/tomcat-home/.m2/repository/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/viewmodel-impl-parent-3.8.0-SNAPSHOT-sources.jar
[INFO] 
[INFO] --- maven-deploy-plugin:2.7:deploy (default-deploy) @ 
viewmodel-impl-parent ---
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/maven-metadata.xml
Downloaded: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/viewmodel-impl-parent/3.8.0-SNAPSHOT/maven-metadata.xml
 (831 B at 73.8 KB/sec)
Uploading: 

Build failed in Jenkins: coreapp-cyndex-2 #192

[cytoscape . build . daemon]

See 

Changes:

[unknown] Update to staging homepage, add search functionality

[unknown] Alternative base URL via Cytoscape properties

[unknown] Split query building process, URLEncode query genes

[unknown] Reformat query to match search portal format

--
Started by an SCM change
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/cy-ndex-2.git # 
 > timeout=10
Fetching upstream changes from https://github.com/cytoscape/cy-ndex-2.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/cy-ndex-2.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 7d263c0467da8ad7ee1019eadc56986206c685c0 (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 7d263c0467da8ad7ee1019eadc56986206c685c0
 > git rev-list c0c7dcf00f94ad128c5c9309534c5e156f7e1c56 # timeout=10
 > git tag -a -f -m Jenkins Build #192 jenkins-coreapp-cyndex-2-192 # timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 39155
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building CyNDEx-2 2.4.0-SNAPSHOT
[INFO] 
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/releases/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
Downloading: 
http://maven.teamdev.com/repository/products/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
Downloading: 
http://repo.maven.apache.org/maven2/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
[WARNING] The POM for org.ndexbio.client:ndex-java-client:jar:2.4.1 is missing, 
no dependency information available
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/releases/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
Downloading: 
http://maven.teamdev.com/repository/products/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
Downloading: 
http://repo.maven.apache.org/maven2/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
[INFO] 
[INFO] BUILD FAILURE
[INFO] 
[INFO] Total time: 3.772s
[INFO] Finished at: Thu May 09 17:45:03 UTC 2019
[INFO] Final Memory: 17M/487M
[INFO] 
[ERROR] Failed to execute goal on project cy-ndex-2: Could not resolve 
dependencies for project org.cytoscape:cy-ndex-2:bundle:2.4.0-SNAPSHOT: Could 
not find artifact org.ndexbio.client:ndex-java-client:jar:2.4.1 in 
cytoscape_releases 
(http://code.cytoscape.org/nexus/content/repositories/releases/) -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e 
switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please 
read the following articles:
[ERROR] [Help 1] 
http://cwiki.apache.org/confluence/display/MAVEN/DependencyResolutionException
[JENKINS] Archiving 
 to 
org.cytoscape/cy-ndex-2/2.4.0-SNAPSHOT/cy-ndex-2-2.4.0-SNAPSHOT.pom
Sending e-mails to: cytoscape-cvs@googlegroups.com
channel stopped

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Build failed in Jenkins: coreapp-cyndex-2 » CyNDEx-2 #192

[cytoscape . build . daemon]

See 


Changes:

[unknown] Update to staging homepage, add search functionality

[unknown] Alternative base URL via Cytoscape properties

[unknown] Split query building process, URLEncode query genes

[unknown] Reformat query to match search portal format

--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building CyNDEx-2 2.4.0-SNAPSHOT
[INFO] 
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/releases/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
Downloading: 
http://maven.teamdev.com/repository/products/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
Downloading: 
http://repo.maven.apache.org/maven2/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
[WARNING] The POM for org.ndexbio.client:ndex-java-client:jar:2.4.1 is missing, 
no dependency information available
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/releases/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
Downloading: 
http://maven.teamdev.com/repository/products/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
Downloading: 
http://repo.maven.apache.org/maven2/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar

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Jenkins build is back to normal : cytoscape-3-gui-distribution #5024

[cytoscape . build . daemon]

See 

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Jenkins build is back to normal : cytoscape-3-impl #5478

[cytoscape . build . daemon]

See 

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Jenkins build is back to normal : cytoscape-3-api #4092

[cytoscape . build . daemon]

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Build failed in Jenkins: cytoscape-3-impl #5477

[cytoscape . build . daemon]

See 

--
Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/cytoscape-impl.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/cytoscape-impl.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/cytoscape-impl.git 
 > +refs/heads/*:refs/remotes/origin/*
ERROR: Error fetching remote repo 'origin'
ERROR: Error fetching remote repo 'origin'

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Build failed in Jenkins: cytoscape-3-gui-distribution #5023

[cytoscape . build . daemon]

See 

--
Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url 
 > https://github.com/cytoscape/cytoscape-gui-distribution.git # timeout=10
Fetching upstream changes from 
https://github.com/cytoscape/cytoscape-gui-distribution.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/cytoscape-gui-distribution.git 
 > +refs/heads/*:refs/remotes/origin/*
ERROR: Error fetching remote repo 'origin'
ERROR: Error fetching remote repo 'origin'

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Build failed in Jenkins: cytoscape-3-api #4091

[cytoscape . build . daemon]

See 

--
Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/cytoscape-api.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/cytoscape-api.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/cytoscape-api.git 
 > +refs/heads/*:refs/remotes/origin/*
ERROR: Error fetching remote repo 'origin'
ERROR: Error fetching remote repo 'origin'

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Build failed in Jenkins: coreapp-cyndex-2 #191

[cytoscape . build . daemon]

See 

Changes:

[brettjsettle] Massive cleanup, organized with new CX Support

[brettjsettle] Register networks on creation

[brettjsettle] Small updates for REST

[brettjsettle] Reorganized

--
Started by an SCM change
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/cy-ndex-2.git # 
 > timeout=10
Fetching upstream changes from https://github.com/cytoscape/cy-ndex-2.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/cy-ndex-2.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision c0c7dcf00f94ad128c5c9309534c5e156f7e1c56 (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f c0c7dcf00f94ad128c5c9309534c5e156f7e1c56
 > git rev-list 77642faab1606f7694be249ac20e7203e407a038 # timeout=10
 > git tag -a -f -m Jenkins Build #191 jenkins-coreapp-cyndex-2-191 # timeout=10
Parsing POMs
Modules changed, recalculating dependency graph
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 38454
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building CyNDEx-2 2.3.1
[INFO] 
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/releases/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
Downloading: 
http://maven.teamdev.com/repository/products/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
Downloading: 
http://repo.maven.apache.org/maven2/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
[WARNING] The POM for org.ndexbio.client:ndex-java-client:jar:2.4.1 is missing, 
no dependency information available
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/releases/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
Downloading: 
http://maven.teamdev.com/repository/products/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
Downloading: 
http://repo.maven.apache.org/maven2/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
[INFO] 
[INFO] BUILD FAILURE
[INFO] 
[INFO] Total time: 4.369s
[INFO] Finished at: Sat May 04 00:45:07 UTC 2019
[INFO] Final Memory: 17M/487M
[INFO] 
[ERROR] Failed to execute goal on project cy-ndex-2: Could not resolve 
dependencies for project org.cytoscape:cy-ndex-2:bundle:2.3.1: Could not find 
artifact org.ndexbio.client:ndex-java-client:jar:2.4.1 in cytoscape_releases 
(http://code.cytoscape.org/nexus/content/repositories/releases/) -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e 
switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please 
read the following articles:
[ERROR] [Help 1] 
http://cwiki.apache.org/confluence/display/MAVEN/DependencyResolutionException
[JENKINS] Archiving 
 to 
org.cytoscape/cy-ndex-2/2.3.1/cy-ndex-2-2.3.1.pom
Sending e-mails to: cytoscape-cvs@googlegroups.com
channel stopped

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Build failed in Jenkins: coreapp-cyndex-2 » CyNDEx-2 #191

[cytoscape . build . daemon]

See 


Changes:

[brettjsettle] Massive cleanup, organized with new CX Support

[brettjsettle] Register networks on creation

[brettjsettle] Small updates for REST

[brettjsettle] Reorganized

--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building CyNDEx-2 2.3.1
[INFO] 
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/releases/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
Downloading: 
http://maven.teamdev.com/repository/products/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
Downloading: 
http://repo.maven.apache.org/maven2/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.pom
[WARNING] The POM for org.ndexbio.client:ndex-java-client:jar:2.4.1 is missing, 
no dependency information available
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/releases/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
Downloading: 
http://maven.teamdev.com/repository/products/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar
Downloading: 
http://repo.maven.apache.org/maven2/org/ndexbio/client/ndex-java-client/2.4.1/ndex-java-client-2.4.1.jar

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Jenkins build is back to normal : cytoscape-3-impl #5450

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Build failed in Jenkins: cytoscape-3-impl #5449

[cytoscape . build . daemon]

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Changes:

[scooter] A number of palette implementation changes as requested by Marc Legeay

--
[...truncated 26765 lines...]
[INFO] Cytoscape Model Impl (model-impl) . SUCCESS [19.428s]
[INFO] Cytoscape Command Executor Impl (command-executor-impl)  SUCCESS [4.359s]
[INFO] Cytoscape Ding Impl Parent (ding-impl)  SUCCESS [3.354s]
[INFO] Cytoscape Ding View/Presentation Impl (ding-presentation-impl)  SUCCESS 
[35.439s]
[INFO] Cytoscape View Model Impl Parent (viewmodel-impl-parent)  SUCCESS 
[2.708s]
[INFO] Cytoscape View Model Impl (viewmodel-impl)  SUCCESS [3.360s]
[INFO] Cytoscape Groups Impl (group-impl)  SUCCESS [4.472s]
[INFO] Cytoscape Event Impl Parent (event-impl-parent) ... SUCCESS [2.513s]
[INFO] Cytoscape Event Impl (event-impl) . SUCCESS [8.565s]
[INFO] Cytoscape Filters Impl (filter-impl) .. SUCCESS [3.088s]
[INFO] Cytoscape Filters 2 Impl (filter2-impl) ... SUCCESS [5.709s]
[INFO] Cytoscape IO Impl Parent (io-impl-parent) . SUCCESS [2.884s]
[INFO] Cytoscape IO Impl (io-impl) ... SUCCESS [18.004s]
[INFO] Cytoscape Layout Impl (layout-impl) ... SUCCESS [4.869s]
[INFO] Cytoscape Ding View/Presentation Impl Performance 
(ding-impl-performance-debug)  SUCCESS [16.811s]
[INFO] Cytoscape Editor Impl (editor-impl) ... SUCCESS [4.347s]
[INFO] Cytoscape Equation Functions Impl (equations-functions-impl)  SUCCESS 
[2.625s]
[INFO] Cytoscape GraphML Impl (graphml-impl) . SUCCESS [4.240s]
[INFO] Cytoscape IO Impl Performance (io-impl-performance)  SUCCESS [14.186s]
[INFO] Cytoscape Jobs Impl (jobs-impl) ... SUCCESS [1.691s]
[INFO] Cytoscape Layout Algorithms Impl (layout-cytoscape-impl)  SUCCESS 
[3.587s]
[INFO] Cytoscape JGraph Layout Impl (layout-jgraph-impl) . SUCCESS [1.184s]
[INFO] Cytoscape Prefuse Layout Impl (layout-prefuse-impl)  SUCCESS [1.505s]
[INFO] Cytoscape Linkout Impl (linkout-impl) . SUCCESS [1.340s]
[INFO] Cytoscape Log Swing Impl (log-swing-impl) . SUCCESS [3.593s]
[INFO] Cytoscape Manual Layout Impl (manual-layout-impl) . SUCCESS [1.950s]
[INFO] Cytoscape Model Impl Performance Debug (model-impl-performance-debug)  
SUCCESS [8.732s]
[INFO] Cytoscape Model Impl Table Performance Debug 
(model-impl-table-performance-debug)  SUCCESS [8.728s]
[INFO] Cytoscape App Impl (app-impl) . SUCCESS [8.850s]
[INFO] Cytoscape Presentation Impl (presentation-impl) ... SUCCESS [2.334s]
[INFO] Cytoscape Property Impl (property-impl) ... SUCCESS [1.241s]
[INFO] Cytoscape Search Impl (search-impl) ... SUCCESS [1.579s]
[INFO] Cytoscape Session Impl (session-impl) . SUCCESS [1.279s]
[INFO] Cytoscape Swing Utility Impl (swing-util-impl)  SUCCESS [3.043s]
[INFO] Cytoscape Swing Application Impl (swing-application-impl)  SUCCESS 
[9.341s]
[INFO] Cytoscape Table Browser Impl (table-browser-impl) . SUCCESS [5.610s]
[INFO] Cytoscape Table Import Impl (table-import-impl) ... SUCCESS [15.317s]
[INFO] Cytoscape VizMap GUI Core Impl (vizmap-gui-core-impl)  SUCCESS [1.200s]
[INFO] Cytoscape VizMap GUI Impl (vizmap-gui-impl) ... SUCCESS [4.160s]
[INFO] Cytoscape VizMap Impl Parent (vizmap-impl-parent) . SUCCESS [2.523s]
[INFO] Cytoscape VizMap Impl (vizmap-impl) ... SUCCESS [7.648s]
[INFO] Cytoscape Webservice Impl (webservice-impl) ... SUCCESS [1.636s]
[INFO] org.cytoscape.work-headless-impl .. SUCCESS [1.094s]
[INFO] org.cytoscape.work-impl ... SUCCESS [2.380s]
[INFO] Cytoscape Work Swing Impl Parent (work-swing-impl-parent)  SUCCESS 
[2.399s]
[INFO] Cytoscape Work Swing Impl (work-swing-impl) ... SUCCESS [2.169s]
[INFO] Cytoscape Application Impl (application-impl) . SUCCESS [3.907s]
[INFO] Cytoscape Datasource Impl (datasource-impl) ... SUCCESS [1.238s]
[INFO] Cytoscape GUI Command Line Parser Impl (gui-cmdline-parser-impl)  
SUCCESS [1.327s]
[INFO] Cytoscape Edge Bundler Impl (edge-bundler-impl) ... SUCCESS [1.161s]
[INFO] Cytoscape Scripting Impl (scripting-impl) . SUCCESS [2.228s]
[INFO] Cytoscape Core Task Impl (core-task-impl) . SUCCESS [10.138s]
[INFO] Cytoscape Utils org.cytoscape.util-impl ... FAILURE [0.217s]
[INFO] Cytoscape Headless Application Impl (headless-application-impl)  SKIPPED
[INFO] Cytoscape Headless Command Line Parser Impl 
(headless-cmdline-parser-impl)  SKIPPED
[INFO] 
[INFO] BUILD FAILURE
[INFO] 
[INFO] Total time: 5:18.995s
[INFO] Finished at: Tue Apr 23 23:00:02 UTC 2019
[INFO] Final Memory: 112M/1051M
[INFO] 
Waiting for Jenkins 

Jenkins build is back to normal : cytoscape-3-impl #5411

[cytoscape . build . daemon]

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Build failed in Jenkins: cytoscape-3-impl #5410

[cytoscape . build . daemon]

See 

Changes:

[mikekucera] CYTOSCAPE-11365 #comment Remove "preferred layout" tab.

[mikekucera] CYTOSCAPE-11365 #comment Save attribute for preferred layout.

--
[...truncated 7463 lines...]
[INFO] writeCode:true
[INFO] verbose:true
[INFO] debug:false
[INFO] args:[]
[INFO] forceRegenerate:false
[INFO] removeOldOutput:false
[INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties]
[INFO] otherDepends:null
[INFO] 
episodeFile:
[INFO] episode:true
[INFO] 
classpathElements:[
[INFO] plugins:null
[INFO] episodes:null
[INFO] useDependenciesAsEpisodes:false
[INFO] xjcPlugins:null
[INFO] episodes:null
[INFO] schemaFiles 
(calculated):[
[INFO] bindingFiles (calculated):[]
[INFO] xjcPluginArtifacts (resolved):[]
[INFO] xjcPluginFiles (resolved):[]
[INFO] xjcPluginURLs (resolved):[]
[INFO] episodeArtifacts (resolved):[]
[INFO] episodeFiles (resolved):[]
[INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1
 
generateDirectory=
 generatePackage=org.cytoscape.io.internal.util.cytables.model
 schemaLanguage=null
 
schemas=[
 bindings=[]
 plugins=[]
 catalogs=[]
 
catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@142bc63c
 readOnly=false
 extension=false
 strict=true
 verbose=true
 debugMode=false
 arguments=[-episode, 

Using java.util.ServiceLoader
[INFO] File 
[
 was changed since the last build.
[INFO] File 
[
 was changed since the last build.
[INFO] Checking up-to-date depends 
[[
 

[INFO] Checking up-to-date produces [[]].
[INFO] Depends timestamp [1,544,460,869,000], produces timestamp [null].
[INFO] Parsing input schema(s)...
[INFO] Compiling input schema(s)...
[INFO] Writing output to 
[
[INFO] Cleaning package directories.
[INFO] XJC writing: org/cytoscape/io/internal/util/cytables/model/CyTables.java
[INFO] XJC writing: 
org/cytoscape/io/internal/util/cytables/model/ObjectFactory.java
[INFO] XJC writing: 
org/cytoscape/io/internal/util/cytables/model/VirtualColumn.java
[INFO] XJC writing: 
org/cytoscape/io/internal/util/cytables/model/VirtualColumns.java
[INFO] Finished execution.
[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ io-impl 
---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 4 resources
[INFO] Copying 1 resource
[INFO] Copying 1 resource
[INFO] Copying 1 resource
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ io-impl ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 213 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[237,45]
 cannot find symbol
  symbol:   method 
getLayoutAttribute(org.cytoscape.view.layout.CyLayoutAlgorithm,org.cytoscape.view.model.CyNetworkView)
  location: variable layoutMgr of type 
org.cytoscape.view.layout.CyLayoutAlgorithmManager
[ERROR] 

Jenkins build is back to stable : cytoscape-3-impl #5397

[cytoscape . build . daemon]

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Jenkins build became unstable: cytoscape-3-impl #5396

[cytoscape . build . daemon]

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Jenkins build is back to normal : cytoscape-3-impl #5368

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Build failed in Jenkins: cytoscape-3-impl #5367

[cytoscape . build . daemon]

See 

Changes:

[scooter] Add link to tutorials.cytoscape.org in Help menu (CYTOSCAPE-12497) and

--
[...truncated 17357 lines...]
[INFO] 
[INFO] Building Cytoscape Swing Utility Impl (swing-util-impl) 3.8.0-SNAPSHOT
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ swing-util-impl ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
swing-util-impl ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 2 resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ 
swing-util-impl ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 12 source files to 

[INFO] 
:
 

 uses unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[310,11]
 show() in java.awt.Dialog has been deprecated
[WARNING] 
:[314,9]
 show() in java.awt.Dialog has been deprecated
[INFO] 2 warnings 
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[137,65]
 cannot find symbol
  symbol:   variable USE_CYBROWSER
  location: class org.cytoscape.util.swing.internal.OpenBrowserImpl
[INFO] 1 error
[INFO] -
[INFO] 
[INFO] Reactor Summary:
[INFO] 
[INFO] Cytoscape Implementation Parent Project POM ... SUCCESS [7.274s]
[INFO] Cytoscape Equations Impl (equations-impl) . SUCCESS [10.883s]
[INFO] Cytoscape Model Impl Parent (model-impl-parent) ... SUCCESS [4.092s]
[INFO] Cytoscape Model Impl (model-impl) . SUCCESS [19.514s]
[INFO] Cytoscape Command Executor Impl (command-executor-impl)  SUCCESS [5.359s]
[INFO] Cytoscape Ding Impl Parent (ding-impl)  SUCCESS [4.143s]
[INFO] Cytoscape Ding View/Presentation Impl (ding-presentation-impl)  SUCCESS 
[45.461s]
[INFO] Cytoscape View Model Impl Parent (viewmodel-impl-parent)  SUCCESS 
[3.508s]
[INFO] Cytoscape View Model Impl (viewmodel-impl)  SUCCESS [3.356s]
[INFO] Cytoscape Groups Impl (group-impl)  SUCCESS [5.148s]
[INFO] Cytoscape Event Impl Parent (event-impl-parent) ... SUCCESS [3.065s]
[INFO] Cytoscape Event Impl (event-impl) . SUCCESS [9.337s]
[INFO] Cytoscape Filters Impl (filter-impl) .. SUCCESS [3.054s]
[INFO] Cytoscape Filters 2 Impl (filter2-impl) ... SUCCESS [5.572s]
[INFO] Cytoscape IO Impl Parent (io-impl-parent) . SUCCESS [4.416s]
[INFO] Cytoscape IO Impl (io-impl) ... SUCCESS [20.536s]
[INFO] Cytoscape Layout Impl (layout-impl) ... SUCCESS [4.602s]
[INFO] Cytoscape Ding View/Presentation Impl Performance 
(ding-impl-performance-debug)  SUCCESS [20.553s]
[INFO] Cytoscape Editor Impl (editor-impl) ... SUCCESS [3.808s]
[INFO] Cytoscape Equation Functions Impl (equations-functions-impl)  SUCCESS 
[2.557s]
[INFO] Cytoscape GraphML Impl (graphml-impl) . SUCCESS [4.864s]
[INFO] Cytoscape IO Impl Performance (io-impl-performance)  SUCCESS [15.911s]
[INFO] Cytoscape Jobs Impl (jobs-impl) ... SUCCESS [6.523s]
[INFO] Cytoscape Layout Algorithms Impl (layout-cytoscape-impl)  SUCCESS 
[3.137s]
[INFO] Cytoscape JGraph Layout Impl (layout-jgraph-impl) . SUCCESS [1.440s]

Jenkins build is back to stable : cytoscape-3-impl #5319

[cytoscape . build . daemon]

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Jenkins build became unstable: cytoscape-3-impl #5318

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Jenkins build is back to stable : cytoscape-3-impl #5275

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Jenkins build became unstable: cytoscape-3-impl #5274

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Jenkins build is back to normal : coreapp-cyrest » cyREST #1082

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Jenkins build is back to normal : cytoscape-3-impl #5234

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Jenkins build is back to normal : cytoscape-3-gui-distribution #4786

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Jenkins build is back to normal : cytoscape-3-gui-distribution » Cytoscape Desktop Application Distribution #4786

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Jenkins build is back to normal : cytoscape-3-api #3871

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Build failed in Jenkins: cytoscape-3-impl #5233

[cytoscape . build . daemon]

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--
[...truncated 228 lines...]
[INFO] bindingFiles (calculated):[]
[INFO] xjcPluginArtifacts (resolved):[]
[INFO] xjcPluginFiles (resolved):[]
[INFO] xjcPluginURLs (resolved):[]
[INFO] episodeArtifacts (resolved):[]
[INFO] episodeFiles (resolved):[]
[INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1
 
generateDirectory=
 generatePackage=org.cytoscape.io.internal.util.session.model
 schemaLanguage=null
 
schemas=[
 bindings=[]
 plugins=[]
 catalogs=[]
 
catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@331e8b25
 readOnly=false
 extension=false
 strict=true
 verbose=true
 debugMode=false
 arguments=[-episode, 

Using java.util.ServiceLoader
[INFO] File 
[
 was changed since the last build.
[INFO] File 
[
 was changed since the last build.
[INFO] Checking up-to-date depends 
[[
 

[INFO] Checking up-to-date produces 
[[
 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Build failed in Jenkins: cytoscape-3-gui-distribution #4785

[cytoscape . build . daemon]

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--
Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url 
 > https://github.com/cytoscape/cytoscape-gui-distribution.git # timeout=10
Fetching upstream changes from 
https://github.com/cytoscape/cytoscape-gui-distribution.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/cytoscape-gui-distribution.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/develop^{commit} # timeout=10
Checking out Revision 132ee6c615c98bd0260d180988c82b0bb3afaf51 (origin/develop)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 132ee6c615c98bd0260d180988c82b0bb3afaf51
 > git rev-list 132ee6c615c98bd0260d180988c82b0bb3afaf51 # timeout=10
 > git tag -a -f -m Jenkins Build #4785 
 > jenkins-cytoscape-3-gui-distribution-4785 # timeout=10
Parsing POMs
Downloaded artifact 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/parent/3.8.0-SNAPSHOT/maven-metadata.xml
Failed to transfer Could not find metadata 
org.cytoscape:parent:3.8.0-SNAPSHOT/maven-metadata.xml in freehep-maven 
(http://java.freehep.org/maven2)
Failed to transfer Could not find metadata 
org.cytoscape:parent:3.8.0-SNAPSHOT/maven-metadata.xml in spring-osgi 
(http://code.cytoscape.org/nexus/content/repositories/spring-osgi/)
Failed to transfer Could not find metadata 
org.cytoscape:parent:3.8.0-SNAPSHOT/maven-metadata.xml in spring-osgi-snapshots 
(http://code.cytoscape.org/nexus/content/repositories/spring-osgi-external/)
Failed to transfer Could not find metadata 
org.cytoscape:parent:3.8.0-SNAPSHOT/maven-metadata.xml in zodiac-repository 
(http://code.cytoscape.org/nexus/content/repositories/zodiac-release/)
Failed to transfer Could not find metadata 
org.cytoscape:parent:3.8.0-SNAPSHOT/maven-metadata.xml in 
zodiac-milestone-repository 
(http://code.cytoscape.org/nexus/content/repositories/zodiac-milestone/)
Failed to transfer Could not find metadata 
org.cytoscape:parent:3.8.0-SNAPSHOT/maven-metadata.xml in apache-snapshots 
(http://repository.apache.org/content/groups/snapshots-group)
Failed to transfer Could not find metadata 
org.cytoscape:parent:3.8.0-SNAPSHOT/maven-metadata.xml in 
ops4j.sonatype.snapshots.deploy 
(https://oss.sonatype.org/content/repositories/ops4j-snapshots/)
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 48319
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 
clean deploy -Pall
[INFO] Scanning for projects...
[INFO] 
[INFO] Reactor Build Order:
[INFO] 
[INFO] Cytoscape Desktop Application Distribution
[INFO] Cytoscape Third-Party Dependencies (third-party)
[INFO] SplashScreen Launcher
[INFO] Cytoscape Launcher
[INFO] Splash Updater
[INFO] Cytoscape Command Line Provider Implementation
[INFO] Cytoscape Diagnostics
[INFO] Cytoscape Branding
[INFO] Cytoscape Application Implementation Metadata
[INFO] Cytoscape GUI-Distribution Integration Test (integration-test)
[INFO] Cytoscape Feature Repository
[INFO] Cytoscape Karaf Distribution
[INFO] 
[INFO] 
[INFO] Building Cytoscape Desktop Application Distribution 3.8.0-SNAPSHOT
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ parent ---
[WARNING] Failed to getClass for org.apache.maven.plugin.source.SourceJarMojo
[INFO] 
[INFO] --- maven-source-plugin:2.4:jar (attach-sources) @ parent ---
[INFO] 
[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ parent ---
[INFO] Installing 
 
to 

Build failed in Jenkins: cytoscape-3-gui-distribution » Cytoscape Desktop Application Distribution #4785

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy -Pall
[INFO] Scanning for projects...
[INFO] 
[INFO] Reactor Build Order:
[INFO] 
[INFO] Cytoscape Desktop Application Distribution
[INFO] Cytoscape Third-Party Dependencies (third-party)
[INFO] SplashScreen Launcher
[INFO] Cytoscape Launcher
[INFO] Splash Updater
[INFO] Cytoscape Command Line Provider Implementation
[INFO] Cytoscape Diagnostics
[INFO] Cytoscape Branding
[INFO] Cytoscape Application Implementation Metadata
[INFO] Cytoscape GUI-Distribution Integration Test (integration-test)
[INFO] Cytoscape Feature Repository
[INFO] Cytoscape Karaf Distribution
[INFO] 
[INFO] 
[INFO] Building Cytoscape Desktop Application Distribution 3.8.0-SNAPSHOT
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ parent ---
[WARNING] Failed to getClass for org.apache.maven.plugin.source.SourceJarMojo
[INFO] 
[INFO] --- maven-source-plugin:2.4:jar (attach-sources) @ parent ---
[INFO] 
[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ parent ---
[INFO] Installing 

 to 
/opt/tomcat-home/.m2/repository/org/cytoscape/distribution/parent/3.8.0-SNAPSHOT/parent-3.8.0-SNAPSHOT.pom
[INFO] 
[INFO] --- maven-deploy-plugin:2.7:deploy (default-deploy) @ parent ---
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/distribution/parent/3.8.0-SNAPSHOT/maven-metadata.xml
Downloaded: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/distribution/parent/3.8.0-SNAPSHOT/maven-metadata.xml
 (611 B at 0.3 KB/sec)
Uploading: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/distribution/parent/3.8.0-SNAPSHOT/parent-3.8.0-20190105.233452-59.pom
Uploaded: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/distribution/parent/3.8.0-SNAPSHOT/parent-3.8.0-20190105.233452-59.pom
 (3 KB at 46.8 KB/sec)
Downloading: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/distribution/parent/maven-metadata.xml
Downloaded: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/distribution/parent/maven-metadata.xml
 (481 B at 5.5 KB/sec)
Uploading: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/distribution/parent/3.8.0-SNAPSHOT/maven-metadata.xml
Uploading: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/distribution/parent/maven-metadata.xml
Uploaded: 
http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/distribution/parent/maven-metadata.xml
 (481 B at 0.0 KB/sec)

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Jenkins build is back to stable : cytoscape-3-impl #5192

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Jenkins build became unstable: cytoscape-3-impl #5191

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Jenkins build is back to normal : cytoscape-3-gui-distribution #4730

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Jenkins build is back to normal : cytoscape-3-gui-distribution » Cytoscape GUI-Distribution Integration Test (integration-test) #4730

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Build failed in Jenkins: cytoscape-3-gui-distribution » Cytoscape GUI-Distribution Integration Test (integration-test) #4729

[cytoscape . build . daemon]

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[WARNING] The POM for org.cytoscape:group-impl:jar:3.8.0-SNAPSHOT is missing, 
no dependency information available
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[WARNING] The POM for org.cytoscape:work-headless-impl:jar:3.8.0-SNAPSHOT is 
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Downloading: 
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[WARNING] The POM for org.cytoscape:presentation-impl:jar:3.8.0-SNAPSHOT is 
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Downloading: 
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Build failed in Jenkins: cytoscape-3-gui-distribution #4729

[cytoscape . build . daemon]

See 

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Build failed in Jenkins: cytoscape-3-gui-distribution #4728

[cytoscape . build . daemon]

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Build failed in Jenkins: cytoscape-3-api #3814

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Changes:

[unknown] Update to 3.8.0-SNAPSHOT

--
Started by an SCM change
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 > git rev-parse --is-inside-work-tree # timeout=10
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 > # timeout=10
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 > git -c core.askpass=true fetch --tags --progress 
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 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/develop^{commit} # timeout=10
Checking out Revision aa352dcea809c7f941c8e875180d44be63f08b65 (origin/develop)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f aa352dcea809c7f941c8e875180d44be63f08b65
 > git rev-list e7817ba848438d62f2c31a0d07c161bafe632bb8 # timeout=10
 > git tag -a -f -m Jenkins Build #3814 jenkins-cytoscape-3-api-3814 # 
 > timeout=10
Parsing POMs
ERROR: Failed to parse POMs
org.apache.maven.project.ProjectBuildingException: Some problems were 
encountered while processing the POMs:
[FATAL] Non-resolvable parent POM: Could not find artifact 
org.cytoscape:parent:pom:3.8.0-SNAPSHOT and 'parent.relativePath' points at 
wrong local POM @ line 7, column 10

at 
org.apache.maven.project.DefaultProjectBuilder.build(DefaultProjectBuilder.java:364)
at hudson.maven.MavenEmbedder.buildProjects(MavenEmbedder.java:361)
at hudson.maven.MavenEmbedder.readProjects(MavenEmbedder.java:331)
at 
hudson.maven.MavenModuleSetBuild$PomParser.invoke(MavenModuleSetBuild.java:1307)
at 
hudson.maven.MavenModuleSetBuild$PomParser.invoke(MavenModuleSetBuild.java:1104)
at hudson.FilePath.act(FilePath.java:914)
at hudson.FilePath.act(FilePath.java:887)
at 
hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.parsePoms(MavenModuleSetBuild.java:966)
at 
hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:685)
at 
hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:585)
at hudson.model.Run.execute(Run.java:1676)
at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:537)
at hudson.model.ResourceController.execute(ResourceController.java:88)
at hudson.model.Executor.run(Executor.java:231)

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Jenkins build is back to stable : cytoscape-3-gui-distribution #4624

[cytoscape . build . daemon]

See 

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Jenkins build is back to stable : cytoscape-3-gui-distribution » Cytoscape GUI-Distribution Integration Test (integration-test) #4624

[cytoscape . build . daemon]

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Jenkins build became unstable: cytoscape-3-gui-distribution » Cytoscape GUI-Distribution Integration Test (integration-test) #4623

[cytoscape . build . daemon]

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Jenkins build became unstable: cytoscape-3-gui-distribution #4623

[cytoscape . build . daemon]

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Build failed in Jenkins: coreapp-command-dialog #553

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3704
originally caused by:
 Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #553 jenkins-coreapp-command-dialog-553 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 53876
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #553

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

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Build failed in Jenkins: coreapp-command-dialog #552

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3703
originally caused by:
 Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #552 jenkins-coreapp-command-dialog-552 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 41786
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #552

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

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Build failed in Jenkins: coreapp-command-dialog #551

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3702
originally caused by:
 Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #551 jenkins-coreapp-command-dialog-551 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 46046
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #551

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
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To post to this group, send email to cytoscape-cvs@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #550

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
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Build failed in Jenkins: coreapp-command-dialog #550

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3701
originally caused by:
 Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #550 jenkins-coreapp-command-dialog-550 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 41113
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #549

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

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Build failed in Jenkins: coreapp-command-dialog #549

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3700
originally caused by:
 Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #549 jenkins-coreapp-command-dialog-549 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 57005
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] 

Jenkins build is back to stable : cytoscape-3-gui-distribution #4590

[cytoscape . build . daemon]

See 

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Jenkins build is back to stable : cytoscape-3-gui-distribution » Cytoscape GUI-Distribution Integration Test (integration-test) #4590

[cytoscape . build . daemon]

See 


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Jenkins build became unstable: cytoscape-3-gui-distribution #4589

[cytoscape . build . daemon]

See 


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Jenkins build became unstable: cytoscape-3-gui-distribution » Cytoscape GUI-Distribution Integration Test (integration-test) #4589

[cytoscape . build . daemon]

See 


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Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #548

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

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Build failed in Jenkins: coreapp-command-dialog #548

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3699
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1449
 originally caused by:
  Started by an SCM change
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #548 jenkins-coreapp-command-dialog-548 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 42730
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #547

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog #547

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3698
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1448
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #547 jenkins-coreapp-command-dialog-547 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 54527
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog #546

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3696
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1447
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #546 jenkins-coreapp-command-dialog-546 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 57687
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #546

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
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To unsubscribe from this group and stop receiving emails from it, send an email 
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Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #545

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
"cytoscape-cvs" group.
To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
To post to this group, send email to cytoscape-cvs@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog #545

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3694
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1446
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #545 jenkins-coreapp-command-dialog-545 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 41037
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog #544

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3692
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1445
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #544 jenkins-coreapp-command-dialog-544 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 53637
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #544

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
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To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
To post to this group, send email to cytoscape-cvs@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #543

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
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To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog #543

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3690
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1444
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #543 jenkins-coreapp-command-dialog-543 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 37111
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #542

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

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Build failed in Jenkins: coreapp-command-dialog #542

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3688
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1443
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #542 jenkins-coreapp-command-dialog-542 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 35083
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog #541

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3686
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1442
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #541 jenkins-coreapp-command-dialog-541 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 54234
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #541

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
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To unsubscribe from this group and stop receiving emails from it, send an email 
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog #540

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3684
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1441
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #540 jenkins-coreapp-command-dialog-540 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 57893
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #540

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
"cytoscape-cvs" group.
To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog #539

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3682
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1440
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #539 jenkins-coreapp-command-dialog-539 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 33986
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #539

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
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To unsubscribe from this group and stop receiving emails from it, send an email 
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #538

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

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Build failed in Jenkins: coreapp-command-dialog #538

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3680
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1439
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #538 jenkins-coreapp-command-dialog-538 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 58573
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog #537

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3678
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1438
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #537 jenkins-coreapp-command-dialog-537 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 53489
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #537

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
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To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog #536

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3676
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1437
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #536 jenkins-coreapp-command-dialog-536 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 33717
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #536

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
"cytoscape-cvs" group.
To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
To post to this group, send email to cytoscape-cvs@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #535

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
"cytoscape-cvs" group.
To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
To post to this group, send email to cytoscape-cvs@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog #535

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3674
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1436
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #535 jenkins-coreapp-command-dialog-535 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 38756
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #534

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

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Build failed in Jenkins: coreapp-command-dialog #534

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3672
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1435
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #534 jenkins-coreapp-command-dialog-534 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 39803
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog #533

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3670
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1434
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #533 jenkins-coreapp-command-dialog-533 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 51827
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #533

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
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To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog #532

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3668
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1433
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #532 jenkins-coreapp-command-dialog-532 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 59663
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class 

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #532

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
"cytoscape-cvs" group.
To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
To post to this group, send email to cytoscape-cvs@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog » Command Line Implementation #531

[cytoscape . build . daemon]

See 


--
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 

 clean deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[INFO] 2 errors 
[INFO] -

-- 
You received this message because you are subscribed to the Google Groups 
"cytoscape-cvs" group.
To unsubscribe from this group and stop receiving emails from it, send an email 
to cytoscape-cvs+unsubscr...@googlegroups.com.
To post to this group, send email to cytoscape-cvs@googlegroups.com.
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For more options, visit https://groups.google.com/d/optout.

Build failed in Jenkins: coreapp-command-dialog #531

[cytoscape . build . daemon]

See 

--
Started by upstream project "cytoscape-3-api" build number 3666
originally caused by:
 Started by upstream project "cytoscape-3-parent" build number 1432
 originally caused by:
  Started by timer
Building in workspace 

 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/cytoscape/command-dialog.git 
 > # timeout=10
Fetching upstream changes from https://github.com/cytoscape/command-dialog.git
 > git --version # timeout=10
 > git -c core.askpass=true fetch --tags --progress 
 > https://github.com/cytoscape/command-dialog.git 
 > +refs/heads/*:refs/remotes/origin/*
 > git rev-parse origin/master^{commit} # timeout=10
Checking out Revision 1f6de8e437ad196c0573d14a1198abf54e846c4e (origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1f6de8e437ad196c0573d14a1198abf54e846c4e
 > git rev-list 1f6de8e437ad196c0573d14a1198abf54e846c4e # timeout=10
 > git tag -a -f -m Jenkins Build #531 jenkins-coreapp-command-dialog-531 # 
 > timeout=10
Parsing POMs
[workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M 
-XX:MaxPermSize=512M -cp 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar
 org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven 
/var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar
 
/opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar
 43310
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; 
support was removed in 8.0
<===[JENKINS REMOTING CAPACITY]===>   channel started
log4j:WARN No appenders could be found for logger 
(org.apache.commons.beanutils.converters.BooleanConverter).
log4j:WARN Please initialize the log4j system properly.
Executing Maven:  -B -f 
 clean 
deploy
[INFO] Scanning for projects...
[INFO] 
[INFO] 
[INFO] Building Command Line Implementation 3.7.0
[INFO] 
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ command-dialog ---
[INFO] Deleting 

[INFO] 
[INFO] --- maven-resources-plugin:3.0.2:resources (default-resources) @ 
command-dialog ---
[WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered 
resources, i.e. build is platform dependent!
[INFO] skip non existing resourceDirectory 

[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ command-dialog 
---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 27 source files to 

[INFO] 
:
 Some input files use unchecked or unsafe operations.
[INFO] 
:
 Recompile with -Xlint:unchecked for details.
[INFO] -
[WARNING] COMPILATION WARNING : 
[INFO] -
[WARNING] 
:[389,50]
 getArgValue(java.lang.String,java.lang.String,java.lang.String) in 
org.cytoscape.command.AvailableCommands has been deprecated
[INFO] 1 warning
[INFO] -
[INFO] -
[ERROR] COMPILATION ERROR : 
[INFO] -
[ERROR] 
:[122,71]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class org.cytoscape.application.swing.CytoPanelName
[ERROR] 
:[121,82]
 cannot find symbol
  symbol:   variable BOTTOM
  location: class