[deal.II] deal-II tests fail due to ginkgo
Hello I am on a linux workstation with ubuntu 18.04. I have successfully installed deal-II (9.1.1) including ginkgo. When I tried to run the deal-II tests with 'make test' ALL of them failed. The reason of failing in ALL tests is due to the following error ../../lib/libdeal_II.so.9.1.1: error: undefined reference to 'gko::OmpExecutor::raw_copy_to(gko::HipExecutor const*, unsigned long, void const*, void*) const' ../../lib/libdeal_II.so.9.1.1: error: undefined reference to 'typeinfo for gko::HipExecutor' collect2: error: ld returned 1 exit status I build ginkgo the way it's described in https://www.dealii.org/current/external-libs/ginkgo.html the installation was successful and all the tests of ginkgo passed. any suggestions on how to resolve this issue? many thanks Thodoros -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe from this group and stop receiving emails from it, send an email to dealii+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/dealii/ceb3f553-3b1c-428b-a47c-e732a4f3e3e6%40googlegroups.com.
Re: [deal.II] Re: Installation on cray XC50 | linking to petsc, lapack and blas libraries with different names
Le jeu. 13 févr. 2020 à 07:27, vachan potluri a écrit : > > It is working! > > The mistake I did was to open an interactive job and run the executables > through bash. When I instead submitted a job, and executed using aprun > (Cray's equivalent to mpirun) to run the executables, they ran successfully. > I tested step-1, step-18 and my own code too. The installation tests will > probably not run though, since they are actually makefile targets. Glad to hear. You should be able to run the installation tests but you need to let cmake know that it shouldn't use mpiexec but aprun instead. This can be done when you configure deal.II by using: -D MPI_EXEC="aprun" Bruno -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe from this group and stop receiving emails from it, send an email to dealii+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/dealii/CAGVt9eO4jdF-C48awXwffjN4wsmCsOJRA4sGXDuyAfyb5%2Bj1tA%40mail.gmail.com.
[deal.II] Re: Installation on cray XC50 | linking to petsc, lapack and blas libraries with different names
It is working! The mistake I did was to open an interactive job and run the executables through bash. When I instead submitted a job, and executed using aprun (Cray's equivalent to mpirun) to run the executables, they ran successfully. I tested step-1, step-18 and my own code too. The installation tests will probably not run though, since they are actually makefile targets. I apologise for being irresponsible and hasty in the previous couple of messages. I thank everyone for helping me and hearing me out when I was all by myself. I will also post a summary of the installation process. -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe from this group and stop receiving emails from it, send an email to dealii+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/dealii/15ec6df7-c08a-4ae1-98c0-ab04bc6db24c%40googlegroups.com.
