Bug#889623: marked as done (kraken: failing autopkgtest, possibly broken package)

2018-02-07 Thread Debian Bug Tracking System 
Your message dated Wed, 07 Feb 2018 13:21:39 +
with message-id 
and subject line Bug#889623: fixed in kraken 1.1-2
has caused the Debian Bug report #889623,
regarding kraken: failing autopkgtest, possibly broken package
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
889623: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=889623
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: kraken
Version: 1.0-1
Severity: important
User: ubuntu-de...@lists.ubuntu.com
Usertags: origin-ubuntu bionic autopkgtest

Dear Andreas,

Since the upload of kraken 1.0-1, the autopkgtests for this package
have been consistently failing in both Debian and Ubuntu.  While the test
failure is (unfortunately) not considered a blocker for Debian testing,
autopkgtest regressions are blockers for Ubuntu releases.

autopkgtest [18:36:18]: test run-unit-test: [---
scan_fasta_file.pl: unable to determine taxonomy ID for sequence gi|441431932|
autopkgtest [18:36:19]: test run-unit-test: ---]
autopkgtest [18:36:19]: test run-unit-test:  - - - - - - - - - - results - - - 
- - - - - - -
run-unit-testFAIL non-zero exit status 25

  https://ci.debian.net/packages/k/kraken/unstable/amd64/

There is very little output from the test, so I'm unsure whether this
represents serious breakage in the package; but I do see that the tests
themselves have not changed from the previous version of the package where
the test did pass, so it does seem likely to me that this is a bug in the
package rather than in the test.

-- 
Steve Langasek   Give me a lever long enough and a Free OS
Debian Developer   to set it on, and I can move the world.
Ubuntu Developerhttp://www.debian.org/
slanga...@ubuntu.com vor...@debian.org


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--- End Message ---
--- Begin Message ---
Source: kraken
Source-Version: 1.1-2

We believe that the bug you reported is fixed in the latest version of
kraken, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 889...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille  (supplier of updated kraken package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 07 Feb 2018 13:59:49 +0100
Source: kraken
Binary: kraken
Architecture: source
Version: 1.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 

Changed-By: Andreas Tille 
Description:
 kraken - assigning taxonomic labels to short DNA sequences
Closes: 889623
Changes:
 kraken (1.1-2) unstable; urgency=medium
 .
   * Slighly more robust method to obtain taxid of fasta files to at least
 enable reading the provided data examples of autopkgtest
 Closes: #889623
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Bug#889623: marked as done (kraken: failing autopkgtest, possibly broken package)

2018-02-05 Thread Debian Bug Tracking System 
Your message dated Mon, 05 Feb 2018 13:24:25 +
with message-id 
and subject line Bug#889623: fixed in tifffile 20170929-1
has caused the Debian Bug report #889623,
regarding kraken: failing autopkgtest, possibly broken package
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
889623: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=889623
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: kraken
Version: 1.0-1
Severity: important
User: ubuntu-de...@lists.ubuntu.com
Usertags: origin-ubuntu bionic autopkgtest

Dear Andreas,

Since the upload of kraken 1.0-1, the autopkgtests for this package
have been consistently failing in both Debian and Ubuntu.  While the test
failure is (unfortunately) not considered a blocker for Debian testing,
autopkgtest regressions are blockers for Ubuntu releases.

autopkgtest [18:36:18]: test run-unit-test: [---
scan_fasta_file.pl: unable to determine taxonomy ID for sequence gi|441431932|
autopkgtest [18:36:19]: test run-unit-test: ---]
autopkgtest [18:36:19]: test run-unit-test:  - - - - - - - - - - results - - - 
- - - - - - -
run-unit-testFAIL non-zero exit status 25

  https://ci.debian.net/packages/k/kraken/unstable/amd64/

There is very little output from the test, so I'm unsure whether this
represents serious breakage in the package; but I do see that the tests
themselves have not changed from the previous version of the package where
the test did pass, so it does seem likely to me that this is a bug in the
package rather than in the test.

-- 
Steve Langasek   Give me a lever long enough and a Free OS
Debian Developer   to set it on, and I can move the world.
Ubuntu Developerhttp://www.debian.org/
slanga...@ubuntu.com vor...@debian.org


signature.asc
Description: PGP signature
--- End Message ---
--- Begin Message ---
Source: tifffile
Source-Version: 20170929-1

We believe that the bug you reported is fixed in the latest version of
tifffile, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 889...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille  (supplier of updated tifffile package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 05 Feb 2018 14:02:32 +0100
Source: tifffile
Binary: python-tifffile
Architecture: source
Version: 20170929-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 

Changed-By: Andreas Tille 
Description:
 python-tifffile - Read and write image data from and to TIFF files
Closes: 889623
Changes:
 tifffile (20170929-1) unstable; urgency=medium
 .
   [ Andreas Tille ]
   * New upstream version
   * Depends: python-enum34, python-concurrent.futures
 Closes: #889623
   * debhelper 11
   * cme fix dpkg-control
 .
   [ Sascha Steinbiss ]
   * Update autopkgtest with new upstream test example.
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