Bug#1071374: debian-goodies: Multiple packages for /lib/x86_64-linux-gnu/libnettle.so.8: libnettle8-dbgsym libnettle8t64-dbgsym

2024-05-17 Thread sidt
Package: debian-goodies
Version: 0.88.1
Severity: normal
X-Debbugs-Cc: sidto...@gmail.com

Dear Maintainer,

# apt --version
apt 2.9.3 (amd64)

root@linux:~# find-dbgsym-packages --install $(which brasero)
W: Multiple packages for /lib/x86_64-linux-gnu/libnettle.so.8
(95d6c88102fe92c1295d6071fbfcb1f6e2654c1b): libnettle8-dbgsym
libnettle8t64-dbgsym
$ apt install --no-install-recommends brasero-dbgsym libarchive13t64-dbgsym
libatk-bridge2.0-0t64-dbgsym libatk1.0-0t64-dbgsym libatspi2.0-0t64-dbgsym
libcairo-gobject2-dbgsym libcairo2-dbgsym libcanberra-gtk3-0-dbgsym
libcanberra0-dbgsym libdw1t64-dbgsym libelf1t64-dbgsym libnettle8-dbgsym
libnettle8t64-dbgsym liborc-0.4-0t64-dbgsym libpng16-16t64-dbgsym
Some packages could not be installed. This may mean that you have
requested an impossible situation or if you are using the unstable
distribution that some required packages have not yet been created
or been moved out of Incoming.
The following information may help to resolve the situation:

Unsatisfied dependencies:
 libnettle8-dbgsym : Depends: libnettle8 (= 3.9.1-2+b1)
Error: Unable to correct problems, you have held broken packages.

Removing 'libnettle8-dbgsym' from the list and manually running above apt
command works fine.

root@linux:~# apt install --no-install-recommends brasero-dbgsym
libarchive13t64-dbgsym libatk-bridge2.0-0t64-dbgsym libatk1.0-0t64-dbgsym
libatspi2.0-0t64-dbgsym libcairo-gobject2-dbgsym libcairo2-dbgsym libcanberra-
gtk3-0-dbgsym libcanberra0-dbgsym libdw1t64-dbgsym libelf1t64-dbgsym
libnettle8t64-dbgsym liborc-0.4-0t64-dbgsym libpng16-16t64-dbgsym
The following packages were automatically installed and are no longer required:
  feedbackd libfeedback-0.0-0  libgmobile0   libpoppler126t64
libpresage1v5  librpmio9t64   libunibreak5  libwireplumber-0.4-0
python3-proton-vpn-session  varnam-schemes varnam-schemes-ml
  feedbackd-common  libgmobile-common  libgovarnam1  libpresage-data
librpm9t64 libtinyxml2.6.2v5  libuv1presage
python3-zombie-imp  varnam-schemes-hi  varnam-schemes-ta
Use 'apt autoremove' to remove them.

Installing:
  brasero-dbgsym  libatk-bridge2.0-0t64-dbgsym  libatspi2.0-0t64-dbgsym
libcairo2-dbgsym   libcanberra0-dbgsym  libelf1t64-dbgsym
liborc-0.4-0t64-dbgsym
  libarchive13t64-dbgsym  libatk1.0-0t64-dbgsym libcairo-
gobject2-dbgsym  libcanberra-gtk3-0-dbgsym  libdw1t64-dbgsym
libnettle8t64-dbgsym  libpng16-16t64-dbgsym

Summary:
  Upgrading: 0, Installing: 14, Removing: 0, Not Upgrading: 98
  Download size: 5,920 kB / 6,346 kB
  Space needed: 7,202 kB / 6,337 MB available

Get:1 http://debug.mirrors.debian.org/debian-debug unstable-debug/main amd64
libarchive13t64-dbgsym amd64 3.7.2-2 [1,064 kB]
Get:2 http://debug.mirrors.debian.org/debian-debug unstable-debug/main amd64
libatk-bridge2.0-0t64-dbgsym amd64 2.52.0-1 [198 kB]
...


-- System Information:
Debian Release: trixie/sid
  APT prefers unstable-debug
  APT policy: (500, 'unstable-debug'), (500, 'unstable'), (1, 
'experimental-debug'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 6.7.12-amd64 (SMP w/4 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

debian-goodies depends on no packages.

Versions of packages debian-goodies recommends:
ii  apt2.9.3
ii  curl   8.7.1-5
ii  dctrl-tools2.24-3+b1
ii  dialog 1.3-20240307-2
ii  elfutils   0.191-1+b1
ii  equivs 2.3.1
ii  libfile-slurper-perl   0.014-1
ii  libfile-which-perl 1.27-2
ii  libipc-system-simple-perl  1.30-2
ii  man-db 2.12.1-1
ii  perl   5.38.2-4
ii  popularity-contest 1.77
ii  procps 2:4.0.4-4
ii  python33.11.8-1
ii  sensible-utils 0.0.22
ii  whiptail   0.52.24-2
ii  zenity 4.0.1-1+b1

Versions of packages debian-goodies suggests:
ii  apt-file3.3
pn  ccze
ii  debsums 3.0.2.1
ii  epiphany-browser [www-browser]  46.0-2
ii  firefox [www-browser]   126.0-1
ii  firefox-esr [www-browser]   115.11.0esr-1
ii  google-chrome-stable [www-browser]  125.0.6422.60-1
pn  konqueror   
ii  links [www-browser] 2.29-1+b3
ii  lsb-release 12.0-2
ii  lsof4.95.0-1.1
ii  lynx [www-browser]  2.9.1-1
ii  midori [www-browser]7.0-2.1+b1
ii  openssh-client  1:9.7p1-5
ii  sudo1.9.15p5-3+b1
ii  w3m [www-browser]

Bug#1070033: libgnutls30: rejects numeric IPv6 addresses during connection

2024-05-17 Thread Andreas Metzler
On 2024-05-18 Elliott Mitchell  wrote:
> On Sat, May 18, 2024 at 06:55:06AM +0200, Andreas Metzler wrote:
[...]
> > > > I notice the `_gnutls_dnsname_is_valid()` function in
> > > > gnutls28-3.8.5/lib/str.h accepts IPv4 addresses (which are NOT valid in
> > > > DNS), but rejects IPv6 addresses.

> > At a very bare level an IPv4 address is a valid DNS name (alnum, dashes,
> > and dots), an IPv6 adress is not. That is what gnutls is checking here.

> No, there isn't any IPv4 address which is a valid DNS name.  No top-level
> domain consists purely of decimal digits, whereas IPv4 addresses consist
> of purely decimal digits.  In fact I don't believe there are any
> top-level domains which have even a single decimal digit in them.

Hello,

which is totally irrelevant if my reading (quoted below) that this is
not a policy check but a performance optimization is correct.

> > Afaict it is a short-cut to save more expensive processing for obvious
> > errors. gnutls_session_get_verify_cert_status() (with
> > gnutls_session_set_verify_cert() set correctly) or
> > gnutls_x509_crt_check_hostname()/gnutls_certificate_verify_peers3()
> > does more elaborate stuff on the data,
> > gnutls_certificate_verify_peers2() requires a separate
> > gnutls_x509_crt_check_hostname().

> Which seems to argue the more urgent issue is
> _gnutls_server_name_send_params() needs to do checking of the provided
> server hostname before sending it as SNI.

Why is this urgent or even relevant? Certificate checking (client-side)
will not accept IP adresses as SNI field.

cu Andreas
-- 
`What a good friend you are to him, Dr. Maturin. His other friends are
so grateful to you.'
`I sew his ears on from time to time, sure'



Bug#1066731: libcloud: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13

2024-05-17 Thread Noah Meyerhans
On Wed, Mar 13, 2024 at 03:57:06PM +0100, Lucas Nussbaum wrote:
> > === FAILURES 
> > ===
> > ___ TestUtils.test_init_once_and_debug_mode 
> > 
> > 
> > self =  > testMethod=test_init_once_and_debug_mode>
> > 
> > def test_init_once_and_debug_mode(self):
> > if have_paramiko:
> > paramiko_logger = logging.getLogger('paramiko')
> > paramiko_logger.setLevel(logging.INFO)
> > 
> > # Debug mode is disabled
> > _init_once()
> > 
> > >   self.assertIsNone(LoggingConnection.log)
> > E   AssertionError:  > 0x7f79cb14b090> is not None
> > 
> > libcloud/test/test_init.py:50: AssertionError

This seems to be an issue with the upstream test suite and is caused by
_init_once() having already been called earlier in the test execution process.
If we run just the failing test on its own, it is successful, but if we run
tests in libcloud/test/compute/test_ssh_client.py first, then it fails because
its setup method calls _init_once().  See below for logs indicating this
behavior.  I'm not sure of the best way to avoid this.  Can we somehow
undo the effect of _init_once()?  Or force these tests to run in a
separate process?  Someone who knows pytest better than me might have
ideas...

Note that this issue is still present in the libcloud 3.8.0 currently in
git.

Successful standalone test execution:

builder@b6dfde9f3b55:/src/libcloud/.pybuild/cpython3_3.11_libcloud/build$ 
python3 -m pytest libcloud/test/test_init.py -v
 test session starts 

platform linux -- Python 3.11.9, pytest-8.1.2, pluggy-1.5.0 -- /usr/bin/python3
cachedir: .pytest_cache
benchmark: 4.0.0 (defaults: timer=time.perf_counter disable_gc=False 
min_rounds=5 min_time=0.05 max_time=1.0 calibration_precision=10 
warmup=False warmup_iterations=10)
rootdir: /src/libcloud/.pybuild/cpython3_3.11_libcloud/build
configfile: pyproject.toml
plugins: xdist-3.5.0, benchmark-4.0.0, timeout-2.3.1, requests-mock-1.11.0
collected 5 items   


libcloud/test/test_init.py::TestUtils::test_factory PASSED  
  [ 20%]
libcloud/test/test_init.py::TestUtils::test_init_once_and_debug_mode PASSED 
  [ 40%]
libcloud/test/test_init.py::TestUtils::test_init_once_correct_chardet_version 
PASSED  [ 60%]
libcloud/test/test_init.py::TestUtils::test_init_once_detects_bad_yum_install_requests
 PASSED [ 80%]
libcloud/test/test_init.py::TestUtils::test_raises_error PASSED 
  [100%]

=== slowest 10 durations 

0.01s call libcloud/test/test_init.py::TestUtils::test_factory

(9 durations < 0.005s hidden.  Use -vv to show these durations.)
= 5 passed in 0.11s 
=

Failing execution following execution of a test from
libcloud/test/compute/test_ssh_client.py:

libcloud/test/compute/test_ssh_client.py::ParamikoSSHClientTests::test_key_material_valid_pem_keys_invalid_header_auto_converbuilder@b6dfde9f3b55:/src/libcloud/.pybuild/cpython3_3.11_libcloud/build$
 python3 -m pytest 
libcloud/test/compute/test_ssh_client.py::ParamikoSSHClientTests::test_password_protected_key_valid_password_provided
 libcloud/test/test_init.py -v
 test session starts 

platform linux -- Python 3.11.9, pytest-8.1.2, pluggy-1.5.0 -- /usr/bin/python3
cachedir: .pytest_cache
benchmark: 4.0.0 (defaults: timer=time.perf_counter disable_gc=False 
min_rounds=5 min_time=0.05 max_time=1.0 calibration_precision=10 
warmup=False warmup_iterations=10)
rootdir: /src/libcloud/.pybuild/cpython3_3.11_libcloud/build
configfile: pyproject.toml
plugins: xdist-3.5.0, benchmark-4.0.0, timeout-2.3.1, requests-mock-1.11.0
collected 6 items   


libcloud/test/compute/test_ssh_client.py::ParamikoSSHClientTests::test_password_protected_key_valid_password_provided
 PASSED [ 16%]
libcloud/test/test_init.py::TestUtils::test_factory PASSED  
  [ 33%]
libcloud/test/test_init.py::TestUtils::test_init_once_and_debug_mode FAILED 
  [ 50%]
libcloud/test/test_init.py::TestUtils::test_init_once_correct_chardet_version 
PASSED  [ 66%]

Bug#1070033: libgnutls30: rejects numeric IPv6 addresses during connection

2024-05-17 Thread Elliott Mitchell
On Sat, May 18, 2024 at 06:55:06AM +0200, Andreas Metzler wrote:
> On 2024-05-17 Elliott Mitchell  wrote:
> > On Thu, May 16, 2024 at 07:06:49PM -0700, Elliott Mitchell wrote:
> > > On Tue, May 14, 2024 at 06:22:09PM +0200, Andreas Metzler wrote:
> [...]
> > > > Could you please post the requested output, although there are no
> > > > obvious clues there to your eyes?
> > > 
> > > Problem is that provides rather a lot of data about this network setup.
> > > The quantity of information is enough for me to be rather uncomfortable
> > > with providing it via public channel.
> [...]
> 
> > > I notice the `_gnutls_dnsname_is_valid()` function in
> > > gnutls28-3.8.5/lib/str.h accepts IPv4 addresses (which are NOT valid in
> > > DNS), but rejects IPv6 addresses.

> At a very bare level an IPv4 address is a valid DNS name (alnum, dashes,
> and dots), an IPv6 adress is not. That is what gnutls is checking here.

No, there isn't any IPv4 address which is a valid DNS name.  No top-level
domain consists purely of decimal digits, whereas IPv4 addresses consist
of purely decimal digits.  In fact I don't believe there are any
top-level domains which have even a single decimal digit in them.

> Afaict it is a short-cut to save more expensive processing for obvious
> errors. gnutls_session_get_verify_cert_status() (with
> gnutls_session_set_verify_cert() set correctly) or
> gnutls_x509_crt_check_hostname()/gnutls_certificate_verify_peers3()
> does more elaborate stuff on the data,
> gnutls_certificate_verify_peers2() requires a separate
> gnutls_x509_crt_check_hostname().

Which seems to argue the more urgent issue is
_gnutls_server_name_send_params() needs to do checking of the provided
server hostname before sending it as SNI.

I've got an initial implementation of this here, but I'm left wondering
how far verification should go.


-- 
(\___(\___(\__  --=> 8-) EHM <=--  __/)___/)___/)
 \BS (| ehem+sig...@m5p.com  PGP 87145445 |)   /
  \_CS\   |  _  -O #include  O-   _  |   /  _/
8A19\___\_|_/58D2 7E3D DDF4 7BA6 <-PGP-> 41D1 B375 37D0 8714\_|_/___/5445



Bug#1070033: libgnutls30: rejects numeric IPv6 addresses during connection

2024-05-17 Thread Andreas Metzler
On 2024-05-17 Elliott Mitchell  wrote:
> On Thu, May 16, 2024 at 07:06:49PM -0700, Elliott Mitchell wrote:
> > On Tue, May 14, 2024 at 06:22:09PM +0200, Andreas Metzler wrote:
[...]
> > > Could you please post the requested output, although there are no
> > > obvious clues there to your eyes?
> > 
> > Problem is that provides rather a lot of data about this network setup.
> > The quantity of information is enough for me to be rather uncomfortable
> > with providing it via public channel.
[...]

> > I notice the `_gnutls_dnsname_is_valid()` function in
> > gnutls28-3.8.5/lib/str.h accepts IPv4 addresses (which are NOT valid in
> > DNS), but rejects IPv6 addresses.

Hello,

At a very bare level an IPv4 address is a valid DNS name (alnum, dashes,
and dots), an IPv6 adress is not. That is what gnutls is checking here.
Afaict it is a short-cut to save more expensive processing for obvious
errors. gnutls_session_get_verify_cert_status() (with
gnutls_session_set_verify_cert() set correctly) or
gnutls_x509_crt_check_hostname()/gnutls_certificate_verify_peers3()
does more elaborate stuff on the data,
gnutls_certificate_verify_peers2() requires a separate
gnutls_x509_crt_check_hostname().

cu Andreas



Bug#1071373: ITS: hardinfo

2024-05-17 Thread Boyuan Yang
Source: hardinfo
Version: 0.5.1+git20180227-2.1
Severity: important
X-Debbugs-CC: tsimo...@debian.org

Dear package hardinfo maintainer in Debian,

After looking into the package you maintain (hardinfo, 
https://tracker.debian.org/pkg/hardinfo), I found that this package
received no maintainer updates in the past 6 years and was not in good
shape. As a result, I am filing an ITS (Intent to Salvage) request
against your package according to section 5.12 in Debian's Developers'
Reference [1].

My current plan is to fix RC bugs and work with the hardinfo2
upstream.

Please let me know whether you are still willing to maintain this
package. According to the criteria listed at [2], I will upload a Non-
maintainer Upload (NMU) of this package onto DELAYED/7 after 21 days
(Jun 08, 2024) to continue with the package salvaging. If you find it
necessary to pause the ITS process, please let me know immediately by
replying this bug report.


[1] 
https://www.debian.org/doc/manuals/developers-reference/pkgs.en.html#package-salvaging
[2] https://wiki.debian.org/PackageSalvaging

-- 
Best Regards,
Boyuan Yang


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Bug#761820: RFP: tsmuxer -- mux video to TS/M2TS files or create BD disks

2024-05-17 Thread Christoph Anton Mitterer
Hey.

Just a note:

In 2019, tsmuxer has been released under Apache 2.0 license.
See https://github.com/justdan96/tsMuxer .

Cheers,
Chris.



Bug#1064465: chromium: Chromium cannot use webgl without X (should be compiled with swiftshader)

2024-05-17 Thread Andres Salomon



On 2/22/24 16:50, Charles Samuels wrote:


On Thursday, February 22, 2024 9:52:03 A.M. PST Andres Salomon wrote:

Swiftshader is manually disabled in Debian's chromium package. It's one
of those legacy patches that I've long meant to look at (and remove if
conditions allow it), but I haven't gotten to yet:
https://salsa.debian.org/chromium-team/chromium/-/commit/84db0501b0d6cb055fe
9f22057cd129fdefac710
  

It wasn't documented *why* swiftshader was disabled. Maybe related to
non-DFSG third party libs (see https://bugs.debian.org/909156)? In order
to reenable it, I need to poke around and see if I can figure out why it
was disabled in the first place.


I looked at all of swiftshader's dependencies' licenses:

SPIRV: Apache
astc-encoder: Apache
benchmark: Apache
boost: Boost license (already part of Debian)
cppdap: Apache
glslang: 3-BSD, 2-BSD, MIT, Apache, GPL3, an NVIDIA license, which seems to be
similar to the MIT/BSD licenses, Khronos License, already part of debian.
glslang is already part of Debian
json: MIT
libbacktrace: BSD
llvm: llvm is already part of Debian
llvm-subzero: same license as LLVM
marl: Apache

Let me know if there is any way I can help!



Thanks for checking into the licenses! The other thing to look into is 
whether there's any compiled stuff included in the swiftshader 
directory. Not just actual binaries (which at least 
debian/scripts/check-upstream should catch), but also .js and similar 
files that have been run through things like minify. With that out of 
the way, I'd be comfortable re-enabling swiftshader.




OpenPGP_0x645D0247C36E7637.asc
Description: OpenPGP public key


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Description: OpenPGP digital signature


Bug#1071025: (no subject)

2024-05-17 Thread wuruilong

Dear Maintainer,

Upstream has been merged to support loongarch architecture code, the PR 
link is as follows: https://github.com/pwmt/zathura/pull/570. Please 
merge the attached patch, or upgrade the software version.


wuruilong



Bug#1071335: upstream commits

2024-05-17 Thread James Cameron
You may be interested in these upstream commits;

b01478d ("Fix some parts of macro expansion are not guarded")
0194b80 ("strerror and memset require string.h")



Bug#1071323: libevent: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file

2024-05-17 Thread Nicolas Mora

Hello,

Le 2024-05-17 à 16 h 38, Santiago Vila a écrit :

Package: src:libevent
Version: 2.1.12-stable-8.1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:



[...]

dpkg-gensymbols: error: some symbols or patterns disappeared in the 
symbols file: see diff output below
dpkg-gensymbols: warning: debian/libevent-2.1-7t64/DEBIAN/symbols 
doesn't match completely debian/libevent-2.1-7t64.symbols
--- debian/libevent-2.1-7t64.symbols 
(libevent-2.1-7t64_2.1.12-stable-8.1_amd64)

+++ dpkg-gensymbols7bd7o9    2024-05-17 17:36:32.466620408 +
@@ -365,7 +365,7 @@
   event_set_mem_functions@Base 2.1.8-stable
   event_sock_err@Base 2.1.8-stable
   event_sock_warn@Base 2.1.8-stable
- (arch=!musl-linux-any)event_strlcpy_@Base 2.1.8-stable
+#MISSING: 2.1.12-stable-8.1# (arch=!musl-linux-any)event_strlcpy_@Base 


Ah, looks like glibc 3.38 is in testing.

I'll apply the patch in experimental and reupload to unstable then, thanks!

/Nicolas



Bug#1071372: emacs: it hangs saving .gpg files (without using cpu)

2024-05-17 Thread Alex Andreotti
Package: emacs
Version: 1:29.3+1-3
Severity: normal
X-Debbugs-Cc: alex.andreo...@gmail.com

Dear Maintainer,

   * What led up to the situation?

For years I have normally used emacs (GUI) to create gpg files (.org.gpg or 
.md.gpg) where I save relatively sensitive information using a key installed in 
the system (with password). Last week when I created a file and saved it, emacs 
asked me to mark the key to use, and when I pressed OK to save the file it 
hung. Probably a "recent" apt upgrade broke it but I don't know exactly which 
one, before this problem I used to save .gpg files often

   * What exactly did you do (or not do) that was effective (or
 ineffective)?

I tried the cli version with emacsclient and tried launching the GUI version 
with -Q, but the problem persists. I tried stopping it with ^C and it break out 
but often the file isn't created, with an existing file it made it invalid.

   * What was the outcome of this action?

When saving .gpg files it hangs and I've to terminate emacs

   * What outcome did you expect instead?

I've been opening/editing/saving .gpg files for years without any problems and 
they save in a second.




-- System Information:
Debian Release: trixie/sid
  APT prefers unstable-debug
  APT policy: (500, 'unstable-debug'), (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 6.8.9-amd64 (SMP w/8 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE, 
TAINT_UNSIGNED_MODULE
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), 
LANGUAGE=en_US:en
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages emacs depends on:
ii  emacs-gtk  1:29.3+1-3

emacs recommends no packages.

emacs suggests no packages.

-- no debconf information



Bug#1069609: Review of mount-zip

2024-05-17 Thread Dennis van Dok

[This is not a formal review with the intent to sponsor, but prospective
sponsors may use these findings as they see fit. Opinions are my own.]

Summary: a missing run-time dependency on fuse needs to be fixed.


[+] The orig.tar.gz is identical to the release file on Github.


[-] Lintian reports a warnings:

  - d/rules sets DEB_HOST_ARCH which should not be necessary. Consider
whether this is necessary; if so, add a lintian override or file
a bug against lintian explaining the false positive.

[+] License is GPL-3, licensecheck reports no odd copyrights or licenses

[+] Package builds cleanly with sbuild -d unstable

[+] d/control:

The capitalisation of the synopsis and long description could be improved.
The best practices[1] state that the synopsis gets no starting capital.

(The full description should start with a Capital, but this is awkward as
it starts with the name of the tool.)


1. 
https://www.debian.org/doc/manuals/developers-reference/best-pkging-practices.en.html#bpp-debian-control

Personal opinion:
the last paragraph of the long description is a bit wishy-washy; it could
be put more concisely by stating that the tool offers performance benefits
on large archives with many files.
 
[+] The rules file fits best practices


[+] passes piuparts

[-] tested installation on a clean system

There seems to be a missing run-time dependency on fuse:

dennis@sidvm:~$ wget 
https://github.com/google/mount-zip/archive/refs/tags/v1.0.14.zip
--2024-05-18 00:30:21--  
https://github.com/google/mount-zip/archive/refs/tags/v1.0.14.zip
Resolving github.com (github.com)... 140.82.121.3
Connecting to github.com (github.com)|140.82.121.3|:443... connected.
HTTP request sent, awaiting response... 302 Found
Location: https://codeload.github.com/google/mount-zip/zip/refs/tags/v1.0.14 
[following]
--2024-05-18 00:30:22--  
https://codeload.github.com/google/mount-zip/zip/refs/tags/v1.0.14
Resolving codeload.github.com (codeload.github.com)... 140.82.121.9
Connecting to codeload.github.com (codeload.github.com)|140.82.121.9|:443... 
connected.
HTTP request sent, awaiting response... 200 OK
Length: unspecified [application/zip]
Saving to: ‘v1.0.14.zip’

v1.0.14.zip   [  <=>
   ] 742.41K  3.31MB/sin 0.2s

2024-05-18 00:30:22 (3.31 MB/s) - ‘v1.0.14.zip’ saved [760225]

dennis@sidvm:~$ mount-zip v1.0.14.zip
mount-zip: Created mount point 'v1.0.14'
fuse: failed to exec fusermount: No such file or directory

After installing the fuse package, the program works as expected.




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Description: OpenPGP digital signature


Bug#1064465: Following up on issue

2024-05-17 Thread Charles Samuels
Hi Andres Salomon or other maintainers.

Back in February, I sent an email to the originator of the patch that disabled 
swiftshader, Michael Gilbert , but I never heard back.

I'd just like to see how I can help get this patch moved along, either for 
trixie or bookworm.

Thanks so much, 

Charles



Bug#1071371: bash-builtins: Please add support for multiarch

2024-05-17 Thread Gioele Barabucci

Package: bash-builtins
Version: 5.2.21-2+b1
Severity: wishlist
User: crossbu...@debian.org
Usertags: cross

Dear bash maintainer,

the Makefiles and the pkgconfig file shipped in bash-builtins use 
`/usr/lib` instead of `/usr/lib/${DEB_HOST_MULTIARCH}`.


Lintian warns about pkg-config-unavailable-for-cross-compilation:


The specified pkg-config(1) file is installed to /usr/lib/pkgconfig.
 As the cross-compilation wrapper of pkg-config does not search this
 directory the file is unavailable under cross-compilation.

Please install the file to /usr/lib/${DEB_HOST_MULTIARCH}/pkgconfig
instead.

Would it be possible to make the bash-builtins package multiarch-compatible?

Regards,

--
Gioele Barabucci



Bug#966621: Make /tmp/ a tmpfs and cleanup /var/tmp/ on a timer by default [was: Re: systemd: tmpfiles.d not cleaning /var/tmp by default]

2024-05-17 Thread Luca Boccassi
> > what would break where, and how to fix it? I only found autopkgtest
> so
> > far, which uses /tmp/ in the guest and expects it to survive across
> > reboots, and I have a MR up already for that. Anything else?
> 
> Perhaps whatever makes these files in /tmp? i think something to do
> with
> X/gdm/gnome?
> 
> /tmp/.X0-lock
> /tmp/.X1024-lock
> /tmp/.X1025-lock
> 
> /tmp/.X11-unix
> /tmp/.X1-lock
> 
> /tmp/.XIM-unix
> 
> /tmp/.font-unix
> 
> /tmp/.ICE-unix

These are all already covered by /usr/lib/tmpfiles.d/x11.conf

-- 
Kind regards,
Luca Boccassi


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Bug#1033839: Packaging docker 24.0.9

2024-05-17 Thread Reinhard Tartler
On Fri, May 17, 2024 at 3:06 PM Tianon Gravi  wrote:

> That's a little bit of a separate concern from what I was talking about
> (Moby own versions vs code dependencies).
>
> In short, no, the upstream project does not currently have any "LTS"
> branches (and never really had anything *super* long term outside of the
> enterprise edition that wasn't open source -- the longest I recall on the
> open source side was somewhere around four months).
>
> The closest thing upstream to LTS right now is probably the 23.x
> branch/release line where Mirantis is maintaining their currently supported
> version with the support/assistance/blessing of the upstream community.
>
> AFAIK, the 24.x branch is effectively already EOL.
>
>
Just to clarify and for the avoidance of doubt, I picked 24.0.9 because I
understand this is the version that is supposed to work with the version of
containerd we currently have in unstable. Obviously packaging supported
versions of docker/containerd is preferable, but since this is already a
daunting task, I opted for this older version to not make the task
more complicated than it needs to be.


-- 
regards,
Reinhard


Bug#1071363: snappy-tools: FTBFS: snappy.cpp:575:51: error: call of overloaded ‘Compress({anonymous}::fd_source*, {anonymous}::FILE_sink*)’ is ambiguous

2024-05-17 Thread наб
Control: reassign -1 src:snappy 1.2.0-2
Control: merge 1070785 -1

On Fri, May 17, 2024 at 10:41:58PM +0200, Santiago Vila wrote:
> Package: src:snappy-tools
> Version: 1-1
> Severity: serious
> Tags: ftbfs
> 
> Dear maintainer:
> 
> During a rebuild of all packages in unstable, your package failed to build:
> 
> 
> snappy.cpp: In function ‘int main(int, char* const*)’:
> snappy.cpp:575:51: error: call of overloaded 
> ‘Compress({anonymous}::fd_source*, {anonymous}::FILE_sink*)’ is ambiguous
>   575 | written = Compress(, );
>   |   ^~~~
> In file included from snappy.cpp:14:
> /usr/include/snappy.h:81:10: note: candidate: ‘size_t 
> snappy::Compress(Source*, Sink*)’
>81 |   size_t Compress(Source* reader, Sink* writer);
>   |  ^~~~
> /usr/include/snappy.h:82:10: note: candidate: ‘size_t 
> snappy::Compress(Source*, Sink*, CompressionOptions)’
>82 |   size_t Compress(Source* reader, Sink* writer,
>   |  ^~~~

Not our bug:
this is #1070785, caused by a breaking fix to #1070217,
and now subject to a potential src:snappy transition in #1070977.

When tchet@ brought the latter to my attention I build-tested against
unbroken libsnappy-dev 1.2.0-3 from experimental and that worked,
so if that ever happens snappy-tools will work.

But a fixed patch, would be much easier to produce:
in restore-api.patch in 1.2.0-2 I see
--- snappy-1.2.0.orig/snappy.h
+++ snappy-1.2.0/snappy.h
@@ -78,6 +78,7 @@ namespace snappy {

   // Compress the bytes read from "*reader" and append to "*writer". 
Return the
   // number of bytes written.
+  size_t Compress(Source* reader, Sink* writer);
   size_t Compress(Source* reader, Sink* writer,
   CompressionOptions options = {});
which will be trivially fixed by deleting the "= {}"
(thus, only the two-argument Compress will be considered when two
 arguments are given, like in snappy-tools and ceph;
 the signatures are not affected by this, since defaults are call-site-only).

I also see
@@ -157,6 +158,8 @@ namespace snappy {
   // `uncompressed_length` is the total number of bytes to be read 
from the
   // elements of `iov` (_not_ the number of elements in `iov`).
   void RawCompressFromIOVec(const struct iovec* iov, size_t 
uncompressed_length,
+char* compressed, size_t* 
compressed_length);
+  void RawCompressFromIOVec(const struct iovec* iov, size_t 
uncompressed_length,
 char* compressed, size_t* 
compressed_length,
 CompressionOptions options = {});
which should've gotten a similar treatment,
or actually no treatment at all, because RawCompressFromIOVec() is new in 1.2
(but AFAICT calling RawCompressFromIOVec() will fail on overload resolution 
like Compress()).

László: I'm attaching a replacement restore-api.patch for src:snappy (based on 
1.2.0-1).
This provides the same symbols as 1.1.9-3 + the new API, seamlessly,
which I think is what you were indending with your original patch in 1.2.0-2:
$ diff -U0 <(nm -D /lib/x86_64-linux-gnu/libsnappy.so.1 | cut -d\  -f2- 
| sort) <(nm -D sn/usr/lib/x86_64-linux-gnu/libsnappy.so.1 | cut -d\  -f2- | 
sort)
--- /dev/fd/63  2024-05-18 00:17:19.586857117 +0200
+++ /dev/fd/62  2024-05-18 00:17:19.590857295 +0200
@@ -8,0 +9,3 @@
+T _ZN6snappy11RawCompressEPKcmPcPmNS_18CompressionOptionsE
+T _ZN6snappy12DeferMemCopyEPPKvPmS1_m
+T _ZN6snappy13ClearDeferredEPPKvPmPh
@@ -15,0 +19 @@
+T 
_ZN6snappy17CompressFromIOVecEPK5iovecmPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEENS_18CompressionOptionsE
@@ -18,0 +23,2 @@
+T _ZN6snappy20RawCompressFromIOVecEPK5iovecmPcPm
+T 
_ZN6snappy20RawCompressFromIOVecEPK5iovecmPcPmNS_18CompressionOptionsE
@@ -42,4 +47,0 @@
-T _ZN6snappy7MemCopyElPKhm
-T _ZN6snappy7MemCopyEPcPKhm
-T _ZN6snappy7MemMoveElPKvm
-T _ZN6snappy7MemMoveEPcPKvm
@@ -46,0 +49 @@
+T 
_ZN6snappy8CompressEPKcmPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEENS_18CompressionOptionsE
@@ -47,0 +51 @@
+T _ZN6snappy8CompressEPNS_6SourceEPNS_4SinkENS_18CompressionOptionsE
@@ -52,0 +57,3 @@
+T _ZN6snappy8internal26CompressFragmentDoubleHashEPKcmPcPtiS4_i
+T _ZN6snappy9MemCopy64ElPKvm
+T _ZN6snappy9MemCopy64EPcPKvm
@@ -62 +69 @@
-U _ZdlPv@GLIBCXX_3.4
+U _ZdlPvm@CXXABI_1.3.9
@@ -68,0 +76 @@
+U _ZSt24__throw_out_of_range_fmtPKcz@GLIBCXX_3.4.20
@@ -71,0 +80 @@
+V _ZTIN6snappy17SnappyIOVecReaderE
@@ 

Bug#1071223: negen: Will FTBFS with next opencascade version 7.8.1

2024-05-17 Thread Tobias Frost
Source: netgen
Followup-For: Bug #1071223
Control: tags -1 ftbfs patch

Attached a patch that makes netgen compile.

Taken from upstream, see forwarded information.


--
tobi




-- System Information:
Debian Release: trixie/sid
  APT prefers oldstable-updates
  APT policy: (500, 'oldstable-updates'), (500, 'oldstable-security'), (500, 
'unstable'), (500, 'testing'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 6.7.12-amd64 (SMP w/8 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), 
LANGUAGE=en_US:en
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Description: Fix for FTBFS with opencascade 7.8.1
 Taken from upstream, with addtional bits (linkage) from the upstream bug.
 and one addtional include removed.
Bug: https://github.com/NGSolve/netgen/issues/170
Origin: 
https://github.com/NGSolve/netgen/commit/486c7d9bcb950dfb33c2a59b68eca3e720af4107
>From 6b89d2cf6203272d04d2738f145bc01b49d75186 Mon Sep 17 00:00:00 2001
From: "Hochsteger, Matthias" 
Date: Wed, 6 Mar 2024 16:29:11 +0100
Subject: [PATCH] Compatibility with Opencascade 7.8

---
 libsrc/meshing/basegeom.cpp | 13 +++--
 libsrc/meshing/basegeom.hpp |  8 
 libsrc/occ/occ_edge.cpp |  5 -
 libsrc/occ/occ_edge.hpp |  1 -
 libsrc/occ/occ_face.cpp |  5 -
 libsrc/occ/occ_face.hpp |  1 -
 libsrc/occ/occ_solid.hpp|  2 --
 libsrc/occ/occ_vertex.cpp   |  5 -
 libsrc/occ/occ_vertex.hpp   |  1 -
 libsrc/occ/occgeom.cpp  |  7 ---
 10 files changed, 7 insertions(+), 41 deletions(-)
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -377,25 +377,20 @@
   TKGeomAlgo
   TKGeomBase
   TKHLR
-  TKIGES
   TKLCAF
   TKMath
   TKMesh
   TKOffset
   TKPrim
-  TKSTEP
-  TKSTEP209
-  TKSTEPAttr
-  TKSTEPBase
-  TKSTL
+  TKDESTL
   TKService
   TKShHealing
   TKTopAlgo
   TKV3d
   TKVCAF
   TKXCAF
-  TKXDEIGES
-  TKXDESTEP
+  TKDEIGES
+  TKDESTEP
   TKXSBase
   TKernel
 )
--- a/libsrc/meshing/basegeom.cpp
+++ b/libsrc/meshing/basegeom.cpp
@@ -568,12 +568,13 @@
 
 auto & identifications = mesh.GetIdentifications();
 
-std::map vert2meshpt;
+Array vert2meshpt(vertices.Size());
+vert2meshpt = PointIndex::INVALID;
 for(auto & vert : vertices)
   {
 auto pi = mesh.AddPoint(vert->GetPoint(), vert->properties.layer);
 tree.Insert(mesh[pi], pi);
-vert2meshpt[vert->GetHash()] = pi;
+vert2meshpt[vert->nr] = pi;
 mesh[pi].Singularity(vert->properties.hpref);
 mesh[pi].SetType(FIXEDPOINT);
 
@@ -585,8 +586,8 @@
 
 for(auto & vert : vertices)
 for(auto & ident : vert->identifications)
-identifications.Add(vert2meshpt[ident.from->GetHash()],
-vert2meshpt[ident.to->GetHash()],
+identifications.Add(vert2meshpt[ident.from->nr],
+vert2meshpt[ident.to->nr],
 ident.name,
 ident.type);
 
@@ -600,8 +601,8 @@
 auto edge = edges[edgenr].get();
 PointIndex startp, endp;
 // throws if points are not found
-startp = vert2meshpt.at(edge->GetStartVertex().GetHash());
-endp = vert2meshpt.at(edge->GetEndVertex().GetHash());
+startp = vert2meshpt[edge->GetStartVertex().nr];
+endp = vert2meshpt[edge->GetEndVertex().nr];
 
 // ignore collapsed edges
 if(startp == endp && edge->GetLength() < 1e-10 * bounding_box.Diam())
--- a/libsrc/meshing/basegeom.hpp
+++ b/libsrc/meshing/basegeom.hpp
@@ -68,7 +68,6 @@
 Transformation<3> primary_to_me;
 
 virtual ~GeometryShape() {}
-virtual size_t GetHash() const = 0;
 virtual bool IsMappedShape( const GeometryShape & other, const 
Transformation<3> & trafo, double tolerance ) const;
   };
 
@@ -320,13 +319,6 @@
   throw Exception("Base geometry get tangent called");
 }
 
-virtual size_t GetEdgeIndex(const GeometryEdge& edge) const
-{
-  for(auto i : Range(edges))
-if(edge.GetHash() == edges[i]->GetHash())
-  return i;
-  throw Exception("Couldn't find edge index");
-}
 virtual void Save (const filesystem::path & filename) const;
 virtual void SaveToMeshFile (ostream & /* ost */) const { ; }
   };
--- a/libsrc/occ/occ_edge.cpp
+++ b/libsrc/occ/occ_edge.cpp
@@ -53,11 +53,6 @@
 throw Exception(ToString("not implemented") + __FILE__ + ":" + 
ToString(__LINE__));
 }
 
-size_t OCCEdge::GetHash() const
-{
-  return edge.HashCode(std::numeric_limits::max());
-}
-
 void OCCEdge::ProjectPoint(Point<3>& p, EdgePointGeomInfo* gi) const
 {
 auto pnt = ng2occ(p);
--- a/libsrc/occ/occ_edge.hpp
+++ b/libsrc/occ/occ_edge.hpp
@@ -36,7 +36,6 @@
 

Bug#1071326: libnet-interface-perl: FTBFS: failing tests

2024-05-17 Thread gregor herrmann
Control: tag -1 + confirmed

On Fri, 17 May 2024 22:39:03 +0200, Santiago Vila wrote:

> *** buffer overflow detected ***: terminated
> t/simplesets.t 
> 1..2
> ok 1 - use Net::Interface;
> Failed 1/2 subtests


Thanks for your bug report!

I can confirm it in a sid cowbuilder chroot, also when running the
test manually:

# prove --blib --verbose t/simplesets.t
t/simplesets.t .. 
1..2
ok 1 - use Net::Interface;
*** buffer overflow detected ***: terminated
Failed 1/2 subtests 

Test Summary Report
---
t/simplesets.t (Wstat: 134 (Signal: ABRT, dumped core) Tests: 1 Failed: 0)
  Non-zero wait status: 134
  Parse errors: Bad plan.  You planned 2 tests but ran 1.
Files=1, Tests=1,  0 wallclock secs ( 0.03 usr  0.00 sys +  0.05 cusr  0.01 
csys =  0.09 CPU)
Result: FAIL


No idea what's going on there yet :)


Cheers,
gregor

-- 
 .''`.  https://info.comodo.priv.at -- Debian Developer https://www.debian.org
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 `. `'  Member VIBE!AT & SPI Inc. -- Supporter Free Software Foundation Europe
   `-   


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Bug#1071370: bash: Errors during generation of documentation files

2024-05-17 Thread Gioele Barabucci

Package: src:bash
Version: 5.2.21-2
Tags: ftbfs
Severity: minor

Dear bash maintainer,

some of the documentation files included in the bash-doc package 
(bash.{html,pdf}, bashref.{html,pdf}) are taken directly from the 
upstream tree and not recompiled from sources.


This is due to a couple of compilation errors are silently ignored:

```
/usr/bin/make -C build-bash/doc info html MAN2HTML=/usr/bin/man2html
make[1]: Entering directory '/<>/build-bash/doc'
make[1]: Nothing to be done for 'info'.
makeinfo --html --no-split -I../.././lib/readline/doc 
../.././doc/bashref.texi

rluser.texi:2: warning: @setfilename after the first element
rm -f bash.html
/usr/bin/man2html ../.././doc/bash.1 | ../.././doc/htmlpost.sh > bash.html
man2html: Unknown operator �.
make[1]: Leaving directory '/<>/build-bash/doc'

/usr/bin/make -C build-bash/doc bash.pdf bashref.pdf
make[1]: Entering directory '/<>/build-bash/doc'
rm -f bash.ps
groff -I../.././doc -man ../.././doc/bash.1 > bash.ps
groff: error: couldn't exec grn: No such file or directory
make[1]: [Makefile:110: bash.ps] Error 4 (ignored)
rm -f bash.pdf
```

https://buildd.debian.org/status/fetch.php?pkg=bash=all=5.2.21-2=1701004303=1

Regards,

--
Gioele Barabucci



Bug#1071293: ddcci-dkms: Fails to build on linux-image-6.8.9-amd64

2024-05-17 Thread Stephen Kitt
Hi Ben,

On Fri, 17 May 2024 21:10:01 +0100, Ben Morris  wrote:
> Although upstream has not yet bumped the version number, I believe they have
> committed changes that fix this to their GitLab repo.

They’ve committed changes that allow the module to build, but it doesn’t work
— see the discussion in
https://gitlab.com/ddcci-driver-linux/ddcci-driver-linux/-/merge_requests/15

Regards,

Stephen


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Description: OpenPGP digital signature


Bug#1071362: rpy2: FTBFS: rpy2/tests/rinterface/test_embedded_r.py s.......Fatal Python error: Segmentation fault

2024-05-17 Thread Santiago Vila

Dirk Eddelbuettel wrote:

Is there a chance this could be spurious?


Unlikely because it also happens here:

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/rpy2.html

Thanks.



Bug#1067620: add max version to python3-ruamel.yaml dependency

2024-05-17 Thread Louis-Philippe Véronneau

On 2024-05-15 15:34, David Mandelberg wrote:

Hi,

Looks like python3-ruamel.yaml is at 0.18.6+ds-3 in testing and 
unstable, and whipper is failing for me now. 
https://github.com/whipper-team/whipper/issues/605#issuecomment-2073552007 mentions a fix. Would it be possible to get that patch in Debian? (I haven't tested it myself though.)


I've seen the patch and I plan to test it and patch the package 
~soonish, as soon as I find the time.


I have a pile of CDs to rip :)

--
  ⢀⣴⠾⠻⢶⣦⠀
  ⣾⠁⢠⠒⠀⣿⡁  Louis-Philippe Véronneau
  ⢿⡄⠘⠷⠚⠋   po...@debian.org / veronneau.org
  ⠈⠳⣄



Bug#1071369: python3-minimal: Installation in an emulated arm64 chroot is extremely slow from amd64 host

2024-05-17 Thread Steev Klimaszewski
Package: python3-minimal
Version: 3.11.8-1
Severity: important
User: de...@kali.org
Usertags: origin-kali

Dear Maintainer,

Apologies for taking so long to track this down... but here we go.

In Kali Linux, between 11 November 2023, and 30 November 2023, the installation 
time of an emulated arm64 build on amd64 host jumped exponentially.

On 11 November, the time that it took to run this build was 1 hour 31 minutes.
On 30 November, the time that it took to run this build was 5 hours 47 minutes.

Initially, I blamed it on texlive, and even submitted bug 1070150 to report the 
increase in time that it took to install, however, as someone else pointed out 
in the bug report, using a minimal testcase of

$ podman run --arch arm64 --rm -it --pull always debian:stable /bin/bash
$ apt update &&
  apt install -y moreutils &&
  apt install -y --download-only python3-minimal
$ time apt install -y python3-minimal | ts

You end up with an install time around 52s (on my machine here, its actually 
around 1 minute 30 seconds).

Doing the same, but pointing at sid, the time is around 3 minutes 52 seconds.

Since I knew that Kali was affected by this from some time in November, I 
decided to ty to track it down in Debian, since it was something coming to us 
indirectly.

I used debootstrap to create chroots from 14 October to 30 November, as our 
britney is allowed to hold packages for 20 days, after my coworker pointed out 
that our britney is allowed to hold packages for up to 20 days.  Initially I 
had only been looking between 08 November and 30 November.  All of them showed 
roughtly the same time here - 3 minutes 42 seconds, on average.

After a lot of chroots (roughly 100), I finally tracked the issue down to being 
on the 14th of October, and it looks like the change being python 3.11.5 moving 
to 3.11.6 is what is causing the issue.  For completeness, I also tested 
python3.12-minimal to see if it has the same slow speed, and unfortunately it 
does.

The fastest way to reproduce this is to use the following commands on an amd64 
host:

$ debootstrap --arch arm64 --components=main,contrib,non-free,non-free-firmware 
testing 20231114 https://snapshot.debian.org/archive/debian/20231114T1502172Z/
systemd-nspawn -D 20231114 /bin/bash
# echo "Acquire::Check-Valid-Until false;" > 
/etc/apt/apt.conf.d/99no-check-valid-until
# apt update
# apt-get install python3-minimal eatmydata moreutils -y --download-only
# apt-get install eatmydata moreutils -y
# time eatmydata apt-get install python3-minimal -y | ts

Then repeat it again, but using 20231113T085432Z instead of the 20231114 url.

$ debootstrap --arch arm64 --components=main,contrib,non-free,non-free-firmware 
testing 20231113 https://snapshot.debian.org/archive/debian/20231113T085432Z/
# echo "Acquire::Check-Valid-Until false;" > 
/etc/apt/apt.conf.d/99no-check-valid-until
# apt update
# apt-get install python3-minimal eatmydata moreutils -y --download-only
# apt-get install eatmydata moreutils -y
# time eatmydata apt-get install python3-minimal -y | ts

This slowdown only occurs during emulating arm64 on an amd64 host, and does not 
occur when emulating armhf, or armel, nor on an arm64 host itself.

I have not tested emulating any other 64bit architectures.


-- System Information:
Debian Release: kali-rolling
  APT prefers unstable
  APT policy: (1, 'unstable')
Architecture: arm64 (aarch64)

Kernel: Linux 6.9.1 (SMP w/8 CPU threads; PREEMPT)
Locale: LANG=C.UTF-8, LC_CTYPE=C.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages python3-minimal depends on:
ii  dpkg1.22.6+kali1
ii  python3.11-minimal  3.11.9-1

python3-minimal recommends no packages.

python3-minimal suggests no packages.

-- no debconf information



Bug#1071362: rpy2: FTBFS: rpy2/tests/rinterface/test_embedded_r.py s.......Fatal Python error: Segmentation fault

2024-05-17 Thread Dirk Eddelbuettel


Is there a chance this could be spurious?  The R API is reasonably stable,
including the part for embedding R (and I am upstream for a small project
doing that from C++).  rpy2 is also mature and stable.  So could this be a
one-off?

Dirk

-- 
dirk.eddelbuettel.com | @eddelbuettel | e...@debian.org



Bug#1071368: [gpgv] cmd-arg parse error with apt/aptitude update

2024-05-17 Thread Lyndon Brown
Package: gpgv
Version: 2.2.43-4
Severity: important

Since sometime last night I'm seeing an error as below when using `apt-
get update` or `aptitude update`. I'm guessing wrt. the earliest
affected version. I've no idea how important an issue this may be, so
cautiously marking important.

I'm running Sid. I typically update multiple times a day. I noticed
that there were gpg package updates yesterday and today and the error
message references gpgv, so I'm filing against gpgv.

$ sudo aptitude update
Hit https://deb.debian.org/debian sid InRelease
Hit https://deb.debian.org/debian rc-buggy InRelease
W: https://deb.debian.org/debian/dists/sid/InRelease: Unknown response from 
gpgv to --assert-pubkey-algo check: gpgv:   error: Error parsing command-line 
arguments
W: https://deb.debian.org/debian/dists/rc-buggy/InRelease: Unknown response 
from gpgv to --assert-pubkey-algo check: gpgv:   error: Error parsing 
command-line arguments

$ sudo apt-get update
Hit:1 https://deb.debian.org/debian sid InRelease
Hit:2 https://deb.debian.org/debian rc-buggy InRelease
Reading package lists... Done
W: https://deb.debian.org/debian/dists/sid/InRelease: Unknown response from 
gpgv to --assert-pubkey-algo check: gpgv:   error: Error parsing command-line 
arguments
W: https://deb.debian.org/debian/dists/rc-buggy/InRelease: Unknown response 
from gpgv to --assert-pubkey-algo check: gpgv:   error: Error parsing 
command-line arguments



Bug#1071366: starlink-pal: FTBFS: palDfltin.c:185:3: error: implicit declaration of function ‘strlcpy’; did you mean ‘strncpy’?

2024-05-17 Thread Santiago Vila

Package: src:starlink-pal
Version: 0.9.10-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build
   dh_update_autotools_config
   debian/rules override_dh_autoreconf
make[1]: Entering directory '/<>'
cp pal.news NEWS
dh_autoreconf
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'.
libtoolize: copying file 'build-aux/ltmain.sh'
libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac,
libtoolize: and rerunning libtoolize and aclocal.
libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am.
configure.ac:25: installing 'build-aux/compile'
configure.ac:26: installing 'build-aux/config.guess'
configure.ac:26: installing 'build-aux/config.sub'
configure.ac:11: installing 'build-aux/install-sh'
configure.ac:11: installing 'build-aux/missing'
Makefile.am: installing 'build-aux/depcomp'
parallel-tests: installing 'build-aux/test-driver'
make[1]: Leaving directory '/<>'
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- --without-cnf --with-pthreads
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking --without-cnf 
--with-pthreads
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu 
format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... 
func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for file... file
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared 
libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking 

Bug#1071367: sway-notification-center: FTBFS: ../src/controlCenter/widgets/baseWidget.vala:114.22-114.24: error: Argument 1: Cannot convert from `pid_t' to `Posix.pid_t'

2024-05-17 Thread Santiago Vila

Package: src:sway-notification-center
Version: 0.9.0-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure
cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 
meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc 
--localstatedir=/var --libdir=lib/x86_64-linux-gnu -Dpython.bytecompile=-1
The Meson build system
Version: 1.4.0
Source dir: /<>
Build dir: /<>/obj-x86_64-linux-gnu
Build type: native build
Project name: sway-notificaton-center
Project version: 0.9.0
C compiler for the host machine: cc (gcc 13.2.0 "cc (Debian 13.2.0-25) 13.2.0")
C linker for the host machine: cc ld.bfd 2.42
Vala compiler for the host machine: valac (valac 0.56.17)
Host machine cpu family: x86_64
Host machine cpu: x86_64
Program glib-compile-schemas found: YES (/usr/bin/glib-compile-schemas)
Program git found: NO
Configuring constants.vala using configuration
Found pkg-config: YES (/usr/bin/pkg-config) 1.8.1
Run-time dependency gio-2.0 found: YES 2.80.2
Run-time dependency gio-unix-2.0 found: YES 2.80.2
Run-time dependency gtk+-3.0 found: YES 3.24.41
Run-time dependency json-glib-1.0 found: YES 1.8.0
Run-time dependency libhandy-1 found: YES 1.8.3
Library gtk-layer-shell found: YES
Library m found: YES
Library posix found: YES
Run-time dependency gee-0.8 found: YES 0.20.6
Run-time dependency libpulse found: YES 16.1
Run-time dependency libpulse-mainloop-glib found: YES 16.1
Dependency libhandy-1 found: YES 1.8.3 (cached)
Run-time dependency gtk-layer-shell-0 found: YES 0.8.2
Dependency gio-2.0 found: YES 2.80.2 (cached)
Program /usr/bin/glib-compile-resources found: YES 
(/usr/bin/glib-compile-resources)
Configuring config.json using configuration
Configuring org.erikreider.swaync.service using configuration
Found CMake: /usr/bin/cmake (3.29.3)
WARNING: CMake Toolchain: Failed to determine CMake compilers state
Run-time dependency systemd found: NO (tried pkgconfig and cmake)
Configuring swaync.service using configuration
Run-time dependency bash-completion found: YES 2.14.0
Run-time dependency fish found: NO (tried pkgconfig and cmake)
Build-time dependency scdoc found: YES 1.11.3
Program /usr/bin/scdoc found: YES (/usr/bin/scdoc)
Message: share/man 1 share/man/man1
Message: share/man 5 share/man/man5
Message: share/man 1 share/man/man1
Build targets in project: 7

sway-notificaton-center 0.9.0

  User defined options
buildtype : plain
libdir: lib/x86_64-linux-gnu
localstatedir : /var
prefix: /usr
sysconfdir: /etc
wrap_mode : nodownload
python.bytecompile: -1

Found ninja-1.12.1 at /usr/bin/ninja
   dh_auto_build
cd obj-x86_64-linux-gnu && LC_ALL=C.UTF-8 ninja -j2 -v
[1/42] /usr/bin/glib-compile-resources 
../src/sway_notification_center.gresource.xml --sourcedir ../src --c-name 
sway_notification_center --internal --generate --target 
src/sway_notification_center-resources.h
[2/42] /usr/bin/glib-compile-resources 
../src/sway_notification_center.gresource.xml --sourcedir ../src --c-name 
sway_notification_center --internal --generate --target 
src/sway_notification_center-resources.c --dependency-file 
src/sway_notification_center-resources.c.d
[3/42] valac -C --enable-gobject-tracing --enable-checking -D WANT_SCRIPTING -D 
HAVE_LATEST_LIBHANDY -D HAVE_LATEST_GTK_LAYER_SHELL --pkg 
libpulse-mainloop-glib --pkg libpulse --pkg gee-0.8 --pkg posix --pkg 
libhandy-1 --pkg json-glib-1.0 --pkg gtk+-3.0 --pkg gio-unix-2.0 --pkg gio-2.0 
--color=always --directory src/swaync-client.p --basedir ../src 
--target-glib=2.50 --pkg=GtkLayerShell-0.1 ../src/client.vala src/constants.vala
[4/42] valac -C --enable-gobject-tracing --enable-checking -D WANT_SCRIPTING -D 
HAVE_LATEST_LIBHANDY -D HAVE_LATEST_GTK_LAYER_SHELL --pkg 
libpulse-mainloop-glib --pkg libpulse --pkg gee-0.8 --pkg posix --pkg 
libhandy-1 --pkg json-glib-1.0 --pkg gtk+-3.0 --pkg gio-unix-2.0 --pkg gio-2.0 
--color=always --directory src/swaync.p --basedir ../src 
--gresources=../src/sway_notification_center.gresource.xml 
--gresourcesdir=src/../src --target-glib=2.50 --pkg=GtkLayerShell-0.1 
../src/main.vala ../src/orderedHashTable/orderedHashTable.vala 
../src/configModel/configModel.vala ../src/swayncDaemon/swayncDaemon.vala 
../src/notiDaemon/notiDaemon.vala ../src/notiModel/notiModel.vala 
../src/notificationWindow/notificationWindow.vala 
../src/notification/notification.vala ../src/controlCenter/controlCenter.vala 
../src/controlCenter/widgets/baseWidget.vala 
../src/controlCenter/widgets/factory.vala 
../src/controlCenter/widgets/title/title.vala 
../src/controlCenter/widgets/dnd/dnd.vala 
../src/controlCenter/widgets/label/label.vala 

Bug#1071365: srpc: FTBFS: src/compress/rpc_compress_snappy.cc:112:37: error: call of overloaded ‘Compress(srpc::RPCSnappySource*, srpc::RPCSnappySink*)’ is ambiguous

2024-05-17 Thread Santiago Vila

Package: src:srpc
Version: 0.10.2-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary  --buildsystem=cmake
   dh_update_autotools_config -O--buildsystem=cmake
   dh_autoreconf -O--buildsystem=cmake
   dh_auto_configure -O--buildsystem=cmake
cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake 
-DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc 
-DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON 
-DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON 
-DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run 
-DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON 
-DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu ..
-- The C compiler identification is GNU 13.2.0
-- The CXX compiler identification is GNU 13.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for lz4.h
-- Looking for lz4.h - found
-- Looking for C++ include snappy.h
-- Looking for C++ include snappy.h - found
-- Looking for C++ include workflow/Workflow.h
-- Looking for C++ include workflow/Workflow.h - found
-- Found OpenSSL: /usr/lib/x86_64-linux-gnu/libcrypto.so (found version "3.2.2")
-- Found Protobuf: /usr/lib/x86_64-linux-gnu/libprotobuf.so (found suitable version 
"3.21.12", minimum required is "3.5.0")
-- Configuring done (1.1s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
FETCHCONTENT_FULLY_DISCONNECTED


-- Build files have been written to: /<>/obj-x86_64-linux-gnu
   dh_auto_build -O--buildsystem=cmake
cd obj-x86_64-linux-gnu && make -j2 "INSTALL=install 
--strip-program=true" VERBOSE=1
make[1]: Entering directory '/<>/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/<> -B/<>/obj-x86_64-linux-gnu 
--check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<>/obj-x86_64-linux-gnu/CMakeFiles 
/<>/obj-x86_64-linux-gnu//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<>/obj-x86_64-linux-gnu'
make  -f CMakeFiles/LINK_HEADERS.dir/build.make 
CMakeFiles/LINK_HEADERS.dir/depend
make  -f src/generator/CMakeFiles/srpc_generator.dir/build.make 
src/generator/CMakeFiles/srpc_generator.dir/depend
make[3]: Entering directory '/<>/obj-x86_64-linux-gnu'
cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> 
/<> /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu 
/<>/obj-x86_64-linux-gnu/CMakeFiles/LINK_HEADERS.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/<>/obj-x86_64-linux-gnu'
cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> 
/<>/src/generator /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu/src/generator 
/<>/obj-x86_64-linux-gnu/src/generator/CMakeFiles/srpc_generator.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu'
make  -f CMakeFiles/LINK_HEADERS.dir/build.make 
CMakeFiles/LINK_HEADERS.dir/build
make  -f src/generator/CMakeFiles/srpc_generator.dir/build.make 
src/generator/CMakeFiles/srpc_generator.dir/build
make[3]: Entering directory '/<>/obj-x86_64-linux-gnu'
/usr/bin/cmake -E make_directory /<>/_include/srpc
make[3]: Entering directory '/<>/obj-x86_64-linux-gnu'
[  2%] Building CXX object 
src/generator/CMakeFiles/srpc_generator.dir/compiler.cc.o
/usr/bin/cmake -E copy_if_different /<>/src/compress/rpc_compress.h 
/<>/_include/srpc/rpc_compress.h
cd /<>/obj-x86_64-linux-gnu/src/generator && /usr/bin/c++  -I/<>/src 
-I/<>/_include/srpc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -fPIC -pipe -std=c++11 
-fno-exceptions -MD -MT src/generator/CMakeFiles/srpc_generator.dir/compiler.cc.o -MF CMakeFiles/srpc_generator.dir/compiler.cc.o.d -o 
CMakeFiles/srpc_generator.dir/compiler.cc.o -c /<>/src/generator/compiler.cc
/usr/bin/cmake -E copy_if_different /<>/src/compress/rpc_compress_gzip.h 
/<>/_include/srpc/rpc_compress_gzip.h
/usr/bin/cmake -E copy_if_different /<>/src/message/rpc_message.h 
/<>/_include/srpc/rpc_message.h
/usr/bin/cmake -E copy_if_different /<>/src/message/rpc_message_srpc.h 
/<>/_include/srpc/rpc_message_srpc.h
/usr/bin/cmake -E 

Bug#1071364: sooperlooper: FTBFS: control_osc.cpp:148:37: error: invalid conversion from ‘int (*)(const char*, const char*, lo_arg**, int, void*, void*)’ to ‘lo_method_handler’

2024-05-17 Thread Santiago Vila

Package: src:sooperlooper
Version: 1.7.8~dfsg0-2
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
   debian/rules override_dh_autoreconf
make[1]: Entering directory '/<>'
dh_autoreconf -- ./autogen.sh

--
Checking basic compilation tools ...

pkg-config: found.
autoconf: found.
aclocal: found.
automake: found.
libtool: found.
gettext: found.
autopoint: found.

--
linking autoconf macros to /<>/aclocal ...


--
Bootstrapping makefiles etc.

Ignore any warnings about AC_TRY_RUN, AC_PROG_LEX, and AC_DEFINE ...

Building autoconf/automake files for the top level ...
configure.ac:27: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are 
deprecated.  For more info, see:
configure.ac:27: 
https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.ac:7: warning: The macro `AC_VALIDATE_CACHED_SYSTEM_TUPLE' is 
obsolete.
configure.ac:7: You should run autoupdate.
./lib/autoconf/general.m4:2089: AC_VALIDATE_CACHED_SYSTEM_TUPLE is expanded 
from...
configure.ac:7: the top level
configure.ac:27: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are 
deprecated.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:1823: AM_INIT_AUTOMAKE is expanded from...
configure.ac:27: the top level
configure.ac:72: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete.
configure.ac:72: You should run autoupdate.
./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from...
configure.ac:72: the top level
configure.ac:185: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:185: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:185: the top level
configure.ac:190: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:190: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
configure.ac:190: the top level
configure.ac:365: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete.
configure.ac:365: You should run autoupdate.
./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from...
configure.ac:365: the top level
configure.ac:398: warning: AC_OUTPUT should be used without arguments.
configure.ac:398: You should run autoupdate.



--
Bootstrapping is complete.

You can now run:

./configure
make
make install


cd libs && sh autogen.sh
configure.ac:4: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are 
deprecated.  For more info, see:
configure.ac:4: 
https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.ac:4: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are 
deprecated.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:139: AM_INIT_AUTOMAKE is expanded from...
configure.ac:4: the top level
configure.ac:8: warning: AC_OUTPUT should be used without arguments.
configure.ac:8: You should run autoupdate.
cd libs/midi++ && sh autogen.sh
configure.ac:29: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are 
deprecated.  For more info, see:
configure.ac:29: 
https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
Makefile.am:10: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or 
'*_CPPFLAGS')
configure.ac:6: warning: The macro `AC_VALIDATE_CACHED_SYSTEM_TUPLE' is 
obsolete.
configure.ac:6: You should run autoupdate.
./lib/autoconf/general.m4:2089: AC_VALIDATE_CACHED_SYSTEM_TUPLE is expanded 
from...
configure.ac:6: the top level
configure.ac:29: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are 
deprecated.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:1823: AM_INIT_AUTOMAKE is expanded from...
configure.ac:29: the top level
configure.ac:48: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete.
configure.ac:48: 

Bug#1071362: rpy2: FTBFS: rpy2/tests/rinterface/test_embedded_r.py s.......Fatal Python error: Segmentation fault

2024-05-17 Thread Santiago Vila

Package: src:rpy2
Version: 3.5.16-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build --with python3 --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.12 setup.py config
cffi mode is CFFI_MODE.ANY
Looking for R home with: R RHOME
R home found: /usr/lib/R
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --ldflags
['-Wl,--export-dynamic -fopenmp -Wl,-z,relro -L/usr/lib/R/lib -lR -lpcre2-8 
-ldeflate -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config BLAS_LIBS
['-lblas', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --cppflags
['-I/usr/share/R/include', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config LIBnn
['lib', '']
cffi mode is CFFI_MODE.ANY
Looking for R home with: R RHOME
R home found: /usr/lib/R
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --ldflags
['-Wl,--export-dynamic -fopenmp -Wl,-z,relro -L/usr/lib/R/lib -lR -lpcre2-8 
-ldeflate -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config BLAS_LIBS
['-lblas', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --cppflags
['-I/usr/share/R/include', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config LIBnn
['lib', '']
running config
I: pybuild base:311: python3.11 setup.py config
cffi mode is CFFI_MODE.ANY
Looking for R home with: R RHOME
R home found: /usr/lib/R
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --ldflags
['-Wl,--export-dynamic -fopenmp -Wl,-z,relro -L/usr/lib/R/lib -lR -lpcre2-8 
-ldeflate -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config BLAS_LIBS
['-lblas', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --cppflags
['-I/usr/share/R/include', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config LIBnn
['lib', '']
cffi mode is CFFI_MODE.ANY
Looking for R home with: R RHOME
R home found: /usr/lib/R
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --ldflags
['-Wl,--export-dynamic -fopenmp -Wl,-z,relro -L/usr/lib/R/lib -lR -lpcre2-8 
-ldeflate -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config BLAS_LIBS
['-lblas', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --cppflags
['-I/usr/share/R/include', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config LIBnn
['lib', '']
running config
   dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.12 setup.py build
cffi mode is CFFI_MODE.ANY
Looking for R home with: R RHOME
R home found: /usr/lib/R
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --ldflags
['-Wl,--export-dynamic -fopenmp -Wl,-z,relro -L/usr/lib/R/lib -lR -lpcre2-8 
-ldeflate -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config BLAS_LIBS
['-lblas', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --cppflags
['-I/usr/share/R/include', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config LIBnn
['lib', '']
cffi mode is CFFI_MODE.ANY
Looking for R home with: R RHOME
R home found: /usr/lib/R
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --ldflags
['-Wl,--export-dynamic -fopenmp -Wl,-z,relro -L/usr/lib/R/lib -lR -lpcre2-8 
-ldeflate -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config BLAS_LIBS
['-lblas', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config --cppflags
['-I/usr/share/R/include', '']
R exec path: /usr/lib/R/bin/R
Looking for R CONFIG with: /usr/lib/R/bin/R CMD config LIBnn
['lib', '']
running build
cffi mode: CFFI_MODE.ANY
running build_py
file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found
creating /<>/.pybuild/cpython3_3.12/build/rpy2
copying rpy2/situation.py -> /<>/.pybuild/cpython3_3.12/build/rpy2
copying rpy2/rinterface.py -> 

Bug#1071363: snappy-tools: FTBFS: snappy.cpp:575:51: error: call of overloaded ‘Compress({anonymous}::fd_source*, {anonymous}::FILE_sink*)’ is ambiguous

2024-05-17 Thread Santiago Vila

Package: src:snappy-tools
Version: 1-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure
   dh_auto_build
make -j2 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<>'
g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection  -pthread -O3 -g -Wall 
-Wextra -fno-exceptions -fno-rtti -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 
-DTEXTDOMAIN_DIRNAME='"/usr/share/locale"' -Wl,-z,relro -Wl,-z,now  snappy.cpp  -lsnappy -o 
snappy
msgfmt --statistics --check-format --check-domain -o 
loc/fr/LC_MESSAGES/snappy-tools.mo fr.po
11 translated messages.
msgfmt --statistics --check-format --check-domain -o 
loc/pl/LC_MESSAGES/snappy-tools.mo pl.po
11 translated messages.
snappy.cpp: In function ‘int {anonymous}::uncompress_framed(FILE*, const char*, 
bool)’:
snappy.cpp:357:49: warning: suggest braces around empty body in an ‘else’ 
statement [-Wempty-body]
  357 | ;
  | ^
snappy.cpp: In function ‘int main(int, char* const*)’:
snappy.cpp:575:51: error: call of overloaded ‘Compress({anonymous}::fd_source*, 
{anonymous}::FILE_sink*)’ is ambiguous
  575 | written = Compress(, );
  |   ^~~~
In file included from snappy.cpp:14:
/usr/include/snappy.h:81:10: note: candidate: ‘size_t snappy::Compress(Source*, 
Sink*)’
   81 |   size_t Compress(Source* reader, Sink* writer);
  |  ^~~~
/usr/include/snappy.h:82:10: note: candidate: ‘size_t snappy::Compress(Source*, 
Sink*, CompressionOptions)’
   82 |   size_t Compress(Source* reader, Sink* writer,
  |  ^~~~
snappy.cpp:581:51: error: call of overloaded 
‘Compress(snappy::ByteArraySource*, {anonymous}::FILE_sink*)’ is ambiguous
  581 | written = Compress(, );
  |   ^
/usr/include/snappy.h:81:10: note: candidate: ‘size_t snappy::Compress(Source*, 
Sink*)’
   81 |   size_t Compress(Source* reader, Sink* writer);
  |  ^~~~
/usr/include/snappy.h:82:10: note: candidate: ‘size_t snappy::Compress(Source*, 
Sink*, CompressionOptions)’
   82 |   size_t Compress(Source* reader, Sink* writer,
  |  ^~~~
make[1]: *** [: snappy] Error 1
make[1]: Leaving directory '/<>'
dh_auto_build: error: make -j2 "INSTALL=install --strip-program=true" returned 
exit code 2
make: *** [debian/rules:23: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.



Bug#1071361: rp-pppoe: FTBFS: if.c:462:9: error: implicit declaration of function ‘strlcpy’; did you mean ‘strncpy’?

2024-05-17 Thread Santiago Vila

Package: src:rp-pppoe
Version: 3.15-2
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh_testdir
test -f src/Makefile || (cd src && PPPD=/usr/sbin/pppd ./configure)
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for ranlib... ranlib
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking sys/dlpi.h usability... no
checking sys/dlpi.h presence... no
checking for sys/dlpi.h... no
checking sys/ioctl.h usability... yes
checking sys/ioctl.h presence... yes
checking for sys/ioctl.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking syslog.h usability... yes
checking syslog.h presence... yes
checking for syslog.h... yes
checking for unistd.h... (cached) yes
checking net/if_arp.h usability... yes
checking net/if_arp.h presence... yes
checking for net/if_arp.h... yes
checking netinet/if_ether.h usability... yes
checking netinet/if_ether.h presence... yes
checking for netinet/if_ether.h... yes
checking getopt.h usability... yes
checking getopt.h presence... yes
checking for getopt.h... yes
checking sys/uio.h usability... yes
checking sys/uio.h presence... yes
checking for sys/uio.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking for fcntl.h... (cached) yes
checking net/bpf.h usability... no
checking net/bpf.h presence... no
checking for net/bpf.h... no
checking netpacket/packet.h usability... yes
checking netpacket/packet.h presence... yes
checking for netpacket/packet.h... yes
checking net/ethernet.h usability... yes
checking net/ethernet.h presence... yes
checking for net/ethernet.h... yes
checking asm/types.h usability... yes
checking asm/types.h presence... yes
checking for asm/types.h... yes
checking linux/if_packet.h usability... yes
checking linux/if_packet.h presence... yes
checking for linux/if_packet.h... yes
checking linux/if_ether.h usability... yes
checking linux/if_ether.h presence... yes
checking for linux/if_ether.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking net/if.h usability... yes
checking net/if.h presence... yes
checking for net/if.h... yes
checking net/if_dl.h usability... no
checking net/if_dl.h presence... no
checking for net/if_dl.h... no
checking net/if_ether.h usability... no
checking net/if_ether.h presence... no
checking for net/if_ether.h... no
checking net/if_types.h usability... no
checking net/if_types.h presence... no
checking for net/if_types.h... no
checking for netinet/if_ether.h... (cached) yes
checking for net/if_types.h... (cached) no
checking for net/if_dl.h... (cached) no
checking for linux/if.h... yes
checking for linux/if_pppox.h... yes
checking for an ANSI C-conforming const... yes
checking for pid_t... yes
checking whether time.h and sys/time.h may both be included... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking for struct sockaddr_ll... yes
checking for N_HDLC line discipline... yes
checking for working memcmp... yes
checking return type of signal handlers... void
checking for select... yes
checking for socket... yes
checking for strerror... yes
checking for strtol... yes
checking for strlcpy... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking size of unsigned short... 2
checking size of unsigned int... 4
checking size of unsigned long... 8
checking for ip... NOTFOUND
checking for pppd... /usr/sbin/pppd
checking for setsid... /usr/bin/setsid
checking for id... /usr/bin/id
checking for Linux 2.4.X kernel-mode PPPoE support... yes
configure: WARNING: *** Oops.  I cannot figure out what version of pppd you 
have.
configure: WARNING: *** All I got back was ''
configure: WARNING: *** I will keep going, but it may not work.
configure: creating ./config.status
config.status: creating Makefile

Bug#1071359: r-cran-rniftilib: FTBFS: nifti1_io.c:472:8: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-cran-rniftilib
Version: 0.0-35.r79-7
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
configure.ac:2: warning: The macro `AC_CONFIG_HEADER' is obsolete.
configure.ac:2: You should run autoupdate.
./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from...
configure.ac:2: the top level
configure.ac:10: warning: The macro `AC_HEADER_STDC' is obsolete.
configure.ac:10: You should run autoupdate.
./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from...
configure.ac:10: the top level
configure.ac:25: warning: The macro `CHECK_ZLIB' is obsolete.
configure.ac:25: You should run autoupdate.
aclocal.m4:81: CHECK_ZLIB is expanded from...
configure.ac:25: the top level
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-cran-rniftilib/ -O--buildsystem=R
I: R Package: Rniftilib Version: 0.0-35
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Fri, 22 Dec 2023 08:50:35 +0100
mkdir -p /<>/debian/r-cran-rniftilib/usr/lib/R/site-library
R CMD INSTALL -l /<>/debian/r-cran-rniftilib/usr/lib/R/site-library 
--clean . "--built-timestamp='Fri, 22 Dec 2023 08:50:35 +0100'"
* installing *source* package ‘Rniftilib’ ...
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C++... yes
checking whether g++ -std=gnu++17 accepts -g... yes
checking for g++ -std=gnu++17 option to enable C++11 features... none needed
checking for gcc... gcc
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for inline... inline
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for GNU libc compatible malloc... yes
checking for pkg-config... /usr/bin/pkg-config
checking if zlib is wanted... yes
checking for inflateEnd in -lz... yes
checking for zlib.h... yes
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating tools/config.h
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG -I../tools -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 
-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include  -DHAVE_CONFIG_H  -fpic  -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 
-Wdate-time -D_FORTIFY_SOURCE=2  -c Rnifti.c -o Rnifti.o
Rnifti.c: In function ‘Rnifti_disp_lib_version’:
Rnifti.c:1670:67: warning: macro "__DATE__" might prevent reproducible builds 
[-Wdate-time]
 1670 | snprintf(buffer, 200, "%s, compiled %s", nifti_lib_version(), 
__DATE__);
  |   
^~~~
gcc -I"/usr/share/R/include" -DNDEBUG -I../tools -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 
-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include  -DHAVE_CONFIG_H  -fpic  -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 
-Wdate-time -D_FORTIFY_SOURCE=2  -c nifti1_io.c -o nifti1_io.o
nifti1_io.c: In function ‘nifti_disp_lib_hist’:
nifti1_io.c:472:8: error: format not a string literal and no format arguments 
[-Werror=format-security]
  472 |Rprintf(gni_history[c]);
  |^~~
nifti1_io.c: In function ‘nifti_disp_matrix_orient’:
nifti1_io.c:1160:4: error: 

Bug#1071357: r-cran-randomfieldsutils: FTBFS: Basic_utils.h:81:41: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-cran-randomfieldsutils
Version: 1.2.5-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-cran-randomfieldsutils/ -O--buildsystem=R
I: R Package: RandomFieldsUtils Version: 1.2.5
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Wed, 18 May 2022 13:00:18 +0200
mkdir -p 
/<>/debian/r-cran-randomfieldsutils/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/debian/r-cran-randomfieldsutils/usr/lib/R/site-library --clean . 
"--built-timestamp='Wed, 18 May 2022 13:00:18 +0200'"
* installing *source* package ‘RandomFieldsUtils’ ...
file ‘configure’ has the wrong MD5 checksum
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C++... yes
checking whether g++ -std=gnu++17 accepts -g... yes
checking for g++ -std=gnu++17 option to enable C++11 features... none needed
configure: value of 'CROSS' is 'noflags'.
checking whether __cpuid is available... no
checking whether cpuid works under asm... yes
configure: 'USE_GPU' has not been set.
checking SIMD options for some CC files... avx2 avx
checking which downwards controls might be used... .
configure: default compilation option is  -DLINUXCPUID  -DGPU_NEEDS=Igpu
-DMEMisALIGNED=Nan
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-25) 13.2.0’
using C++ compiler: ‘g++ (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG  -fopenmp  -DLINUXCPUID  
-DGPU_NEEDS=Igpu-DMEMisALIGNED=Nan  -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c AutoRandomFieldsUtils.cc -o AutoRandomFieldsUtils.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG  -fopenmp  -DLINUXCPUID  
-DGPU_NEEDS=Igpu-DMEMisALIGNED=Nan  -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c beskf.cc -o beskf.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG  -fopenmp  -DLINUXCPUID  
-DGPU_NEEDS=Igpu-DMEMisALIGNED=Nan  -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c brdomain.cc -o brdomain.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG  -fopenmp  -DLINUXCPUID  
-DGPU_NEEDS=Igpu-DMEMisALIGNED=Nan  -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c extern.cc -o extern.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG  -fopenmp  -DLINUXCPUID  
-DGPU_NEEDS=Igpu-DMEMisALIGNED=Nan  -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c kleinkram.cc -o kleinkram.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
In file included from kleinkram.cc:26:
kleinkram.cc: In function ‘void xA_noomp(double*, double*, Long, Long, 
double*)’:
Basic_utils.h:81:41: error: format not a string literal and no format 

Bug#1071358: r-cran-rgeos: FTBFS: geos.c:102:13: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-cran-rgeos
Version: 0.6-4-2
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-cran-rgeos/ -O--buildsystem=R
I: R packages needed for DEP8: maptools (>= 0.8-5), testthat, xml, maps
I: R Package: rgeos Version: 0.6-4
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Mon, 28 Aug 2023 13:41:22 +0200
mkdir -p /<>/debian/r-cran-rgeos/usr/lib/R/site-library
R CMD INSTALL -l /<>/debian/r-cran-rgeos/usr/lib/R/site-library 
--clean . "--built-timestamp='Mon, 28 Aug 2023 13:41:22 +0200'"
* installing *source* package ‘rgeos’ ...
file ‘DESCRIPTION’ has the wrong MD5 checksum
** using staged installation
configure: CC: gcc
configure: CXX: g++ -std=gnu++17
configure: rgeos: 0.6-4
checking for /usr/bin/svnversion... no
configure: svn revision: 699
checking for geos-config... /usr/bin/geos-config
checking geos-config usability... yes
configure: GEOS version: 3.12.1
checking geos version at least 3.2.0... yes
checking geos-config clibs... yes
checking geos_c.h  presence and usability... yes
checking geos: linking with libgeos_c... yes
configure: PKG_CPPFLAGS:  -I/usr/include
configure: PKG_LIBS:  -L/usr/lib/x86_64-linux-gnu -lgeos_c
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
using C++ compiler: ‘g++ (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I/usr/include 
-I'/usr/lib/R/site-library/sp/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c dummy.cc -o dummy.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
gcc -I"/usr/share/R/include" -DNDEBUG -I/usr/include 
-I'/usr/lib/R/site-library/sp/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c init.c -o init.o
gcc -I"/usr/share/R/include" -DNDEBUG -I/usr/include 
-I'/usr/lib/R/site-library/sp/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c local_stubs.c -o local_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG -I/usr/include 
-I'/usr/lib/R/site-library/sp/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c rgeos.c -o rgeos.o
rgeos.c: In function ‘__warningHandler’:
rgeos.c:102:13: error: format not a string literal and no format arguments 
[-Werror=format-security]
  102 | warning(buf);
  | ^~~
cc1: some warnings being treated as errors
make[1]: *** [/usr/lib/R/etc/Makeconf:195: rgeos.o] Error 1
make[1]: Leaving directory '/<>/src'
make[1]: Entering directory '/<>/src'
make[1]: Leaving directory '/<>/src'
ERROR: compilation failed for package ‘rgeos’
* removing ‘/<>/debian/r-cran-rgeos/usr/lib/R/site-library/rgeos’
dh_auto_install: error: R CMD INSTALL -l 
/<>/debian/r-cran-rgeos/usr/lib/R/site-library --clean . 
"--built-timestamp='Mon, 28 Aug 2023 13:41:22 +0200'" returned exit code 1
make: *** [debian/rules:4: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.


Bug#1071353: r-bioc-xvector: FTBFS: RDS_random_access.c:136:17: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-xvector
Version: 0.42.0-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-xvector/ -O--buildsystem=R
I: R Package: XVector Version: 0.42.0
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Thu, 30 Nov 2023 00:31:07 +
mkdir -p /<>/debian/r-bioc-xvector/usr/lib/R/site-library
R CMD INSTALL -l /<>/debian/r-bioc-xvector/usr/lib/R/site-library 
--clean . "--built-timestamp='Thu, 30 Nov 2023 00:31:07 +'"
* installing *source* package ‘XVector’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-fpic  -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c IRanges_stubs.c -o IRanges_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-fpic  -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Ocopy_byteblocks.c -o Ocopy_byteblocks.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-fpic  -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c RDS_random_access.c -o RDS_random_access.o
RDS_random_access.c: In function ‘RDS_read_chars’:
RDS_random_access.c:136:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  136 | error(errmsg);
  | ^
RDS_random_access.c: In function ‘RDS_read_vector_length’:
RDS_random_access.c:218:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  218 | error(errmsg);
  | ^
RDS_random_access.c:226:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  226 | error(errmsg);
  | ^
RDS_random_access.c: In function ‘RDS_read_string’:
RDS_random_access.c:277:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  277 | error(errmsg);
  | ^
RDS_random_access.c:283:25: error: format not a string literal and no format 
arguments [-Werror=format-security]
  283 | error(errmsg);
  | ^
RDS_random_access.c: In function ‘RDS_read_atomic_vector’:
RDS_random_access.c:360:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  360 | error(errmsg);
  | ^
RDS_random_access.c: In function ‘RDS_read_attrib_separator’:
RDS_random_access.c:406:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  406 | error(errmsg);
  | ^
RDS_random_access.c: In function ‘RDS_read_symbol’:
RDS_random_access.c:428:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  428 | error(errmsg);
  | ^
RDS_random_access.c: In function ‘RDS_read_object’:
RDS_random_access.c:497:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  497 | error(errmsg);
  | ^
RDS_random_access.c: In function ‘RDS_read_file_header’:
RDS_random_access.c:559:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  559 | error(errmsg);
  | ^
RDS_random_access.c: In function ‘extract_top_level_object_type’:
RDS_random_access.c:618:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  618 | error(errmsg);
 

Bug#1071356: r-cran-randomfields: FTBFS: /usr/lib/R/site-library/RandomFieldsUtils/include/Basic_utils.h:81:41: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-cran-randomfields
Version: 3.3.14-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-cran-randomfields/ -O--buildsystem=R
I: R Package: RandomFields Version: 3.3.14
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Sat, 12 Feb 2022 23:40:29 +0100
mkdir -p 
/<>/debian/r-cran-randomfields/usr/lib/R/site-library
xvfb-run --auto-servernum --server-num=20 -s "-screen 0 1024x768x24 -ac +extension GLX +render 
-noreset" R CMD INSTALL -l /<>/debian/r-cran-randomfields/usr/lib/R/site-library 
--clean . "--built-timestamp='Sat, 12 Feb 2022 23:40:29 +0100'"
* installing *source* package ‘RandomFields’ ...
file ‘configure’ has the wrong MD5 checksum
** using staged installation
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
using C++ compiler: ‘g++ (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/RandomFieldsUtils/include'-fopenmp   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c AutoRandomFields.cc -o AutoRandomFields.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/RandomFieldsUtils/include'-fopenmp   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c Brown.cc -o Brown.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
In file included from Brown.cc:31:
Brown.cc: In function ‘int checkBrownResnickProc(model*)’:
/usr/lib/R/site-library/RandomFieldsUtils/include/Basic_utils.h:81:41: error: 
format not a string literal and no format arguments [-Werror=format-security]
   81 | SPRINTF(E_AUX, M, A,B,C,D); RFERROR(E_AUX);}
  | ^
/usr/lib/R/site-library/RandomFieldsUtils/include/Basic_utils.h:227:5: note: in 
expansion of macro ‘RFERROR4’
  227 | RFERROR4("Severe error occured in function '%.50s' (file '%.50s', line 
%d).%.200s", \
  | ^~~~
Machine.h:287:74: note: in expansion of macro ‘BUG’
  287 |/*  ||  !equalsIsotropic(OWNISO(1)) */ 
)) BUG;}
  | 
 ^~~
Brown.cc:135:3: note: in expansion of macro ‘ASSERT_ONESYSTEM’
  135 |   ASSERT_ONESYSTEM;
  |   ^~~~
Brown.cc: In function ‘int init_BRorig(model*, gen_storage*)’:
/usr/lib/R/site-library/RandomFieldsUtils/include/Basic_utils.h:81:41: error: 
format not a string literal and no format arguments [-Werror=format-security]
   81 | SPRINTF(E_AUX, M, A,B,C,D); RFERROR(E_AUX);}
  | ^
/usr/lib/R/site-library/RandomFieldsUtils/include/Basic_utils.h:227:5: note: in 
expansion of macro ‘RFERROR4’
  227 | RFERROR4("Severe error occured in function '%.50s' (file '%.50s', line 
%d).%.200s", \
  | ^~~~
Brown.cc:224:20: note: in expansion of macro ‘BUG’
  224 |   if (key == NULL) BUG;
  |^~~
Brown.cc: In function ‘void do_BRshifted(model*, gen_storage*)’:
/usr/lib/R/site-library/RandomFieldsUtils/include/Basic_utils.h:81:41: error: 
format not a string literal and no format arguments [-Werror=format-security]
   81 | SPRINTF(E_AUX, M, A,B,C,D); RFERROR(E_AUX);}
  | ^
/usr/lib/R/site-library/RandomFieldsUtils/include/Basic_utils.h:227:5: note: in 
expansion of macro ‘RFERROR4’
  227 | RFERROR4("Severe error occured in function '%.50s' (file '%.50s', line 
%d).%.200s", \
  | ^~~~
Brown.cc:375:41: note: in expansion of macro ‘BUG’
  375 | if (mem2loc[trendindex] != zeropos) BUG;
  | ^~~
Brown.cc: In function ‘void OptimArea(model*)’:
/usr/lib/R/site-library/RandomFieldsUtils/include/Basic_utils.h:81:41: error: 
format 

Bug#1071355: r-cran-maptools: FTBFS: Rgshhs.c:101:23: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-cran-maptools
Version: 1:1.1-8+dfsg-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-cran-maptools/ -O--buildsystem=R
I: R packages needed for DEP8:
I: R Package: maptools Version: 1.1-8
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Mon, 24 Jul 2023 19:12:46 +0200
mkdir -p 
/<>/r-cran-maptools-1.1-8\+dfsg/debian/r-cran-maptools/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/r-cran-maptools-1.1-8\+dfsg/debian/r-cran-maptools/usr/lib/R/site-library 
--clean . "--built-timestamp='Mon, 24 Jul 2023 19:12:46 +0200'"
* installing *source* package ‘maptools’ ...
files ‘data/state.vbm.rda’, ‘data/wrld_simpl.rda’, ‘inst/shapes/baltim.dbf’, 
‘inst/shapes/baltim.shp’, ‘inst/shapes/baltim.shx’, ‘inst/shapes/columbus.dbf’, 
‘inst/shapes/columbus.shp’, ‘inst/shapes/columbus.shx’, 
‘inst/shapes/pointZ.dbf’, ‘inst/shapes/pointZ.prj’, ‘inst/shapes/pointZ.shp’, 
‘inst/shapes/pointZ.shx’, ‘inst/shapes/sids.dbf’, ‘inst/shapes/sids.shp’, 
‘inst/shapes/sids.shx’ are missing
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Rcentroid.c -o Rcentroid.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Rgshhs.c -o Rgshhs.o
Rgshhs.c: In function ‘Rgshhs’:
Rgshhs.c:101:23: error: format not a string literal and no format arguments 
[-Werror=format-security]
  101 | error(msg);
  |   ^~~
Rgshhs.c:341:47: error: format not a string literal and no format arguments 
[-Werror=format-security]
  341 | error(msg);
  |   ^~~
cc1: some warnings being treated as errors
make[1]: *** [/usr/lib/R/etc/Makeconf:195: Rgshhs.o] Error 1
make[1]: Leaving directory '/<>/src'
make[1]: Entering directory '/<>/src'
make[1]: Leaving directory '/<>/src'
ERROR: compilation failed for package ‘maptools’
* removing 
‘/<>/debian/r-cran-maptools/usr/lib/R/site-library/maptools’
dh_auto_install: error: R CMD INSTALL -l 
/<>/r-cran-maptools-1.1-8\+dfsg/debian/r-cran-maptools/usr/lib/R/site-library 
--clean . "--built-timestamp='Mon, 24 Jul 2023 19:12:46 +0200'" returned exit code 1
make: *** [debian/rules:4: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.



Bug#1071354: r-cran-eco: FTBFS: rand.c:245:5: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-cran-eco
Version: 4.0-3-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-cran-eco/ -O--buildsystem=R
I: R Package: eco Version: 4.0-3
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Wed, 23 Nov 2022 11:39:37 +0100
mkdir -p /<>/debian/r-cran-eco/usr/lib/R/site-library
R CMD INSTALL -l /<>/debian/r-cran-eco/usr/lib/R/site-library 
--clean . "--built-timestamp='Wed, 23 Nov 2022 11:39:37 +0100'"
* installing *source* package ‘eco’ ...
** package ‘eco’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c bayes.c -o bayes.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c fintegrate.c -o fintegrate.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c gibbsBase.c -o gibbsBase.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c gibbsBase2C.c -o gibbsBase2C.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c gibbsBaseRC.c -o gibbsBaseRC.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c gibbsDP.c -o gibbsDP.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c gibbsEM.c -o gibbsEM.o
gibbsEM.c: In function ‘cEMeco’:
gibbsEM.c:235:52: warning: format ‘%g’ expects a matching ‘double’ argument 
[-Wformat=]
  235 |   if (setP.ncar) Rprintf("Sig3: 
%10g%10g%10g%10g\n",setP.Sigma3[0][0],setP.Sigma3[1][1],setP.Sigma3[2][2]);
  | ~~~^
  ||
  |double
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c gibbsXBase.c -o gibbsXBase.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c gibbsXDP.c -o gibbsXDP.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c gibbsZBase.c -o gibbsZBase.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 

Bug#1071352: r-bioc-variantannotation: FTBFS: vcffile.c:46:5: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-variantannotation
Version: 1.48.1-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-variantannotation/ -O--buildsystem=R
I: R Package: VariantAnnotation Version: 1.48.1
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Fri, 01 Dec 2023 10:52:30 +0100
mkdir -p 
/<>/debian/r-bioc-variantannotation/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/debian/r-bioc-variantannotation/usr/lib/R/site-library --clean . 
"--built-timestamp='Fri, 01 Dec 2023 10:52:30 +0100'"
* installing *source* package ‘VariantAnnotation’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Biostrings_stubs.c -o Biostrings_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c IRanges_stubs.c -o IRanges_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c R_init_VariantAnnotation.c -o R_init_VariantAnnotation.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c XVector_stubs.c -o XVector_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c dna_hash.c -o dna_hash.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c rle.c -o rle.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 

Bug#1071351: r-bioc-sparsearray: FTBFS: leaf_vector_utils.c:33:17: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-sparsearray
Version: 1.2.4+dfsg-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-sparsearray/ -O--buildsystem=R
I: R Package: SparseArray Version: 1.2.4
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Tue, 20 Feb 2024 14:27:12 +0100
mkdir -p 
/<>/r-bioc-sparsearray-1.2.4\+dfsg/debian/r-bioc-sparsearray/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/r-bioc-sparsearray-1.2.4\+dfsg/debian/r-bioc-sparsearray/usr/lib/R/site-library
 --clean . "--built-timestamp='Tue, 20 Feb 2024 14:27:12 +0100'"
* installing *source* package ‘SparseArray’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c ExtendableJaggedArray.c -o ExtendableJaggedArray.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c IRanges_stubs.c -o IRanges_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c R_init_SparseArray.c -o R_init_SparseArray.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Rvector_summarization.c -o Rvector_summarization.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Rvector_utils.c -o Rvector_utils.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c S4Vectors_stubs.c -o S4Vectors_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c SBT_utils.c -o SBT_utils.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 

Bug#1071350: r-bioc-shortread: FTBFS: readBfaToc.cc:30:14: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-shortread
Version: 1.60.0-2
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
configure.ac:14: warning: The macro `AC_ERROR' is obsolete.
configure.ac:14: You should run autoupdate.
./lib/autoconf/oldnames.m4:34: AC_ERROR is expanded from...
configure.ac:14: the top level
configure.ac:17: warning: AC_OUTPUT should be used without arguments.
configure.ac:17: You should run autoupdate.
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-shortread/ -O--buildsystem=R
I: R Package: ShortRead Version: 1.60.0
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Mon, 18 Dec 2023 07:49:58 +0100
mkdir -p /<>/debian/r-bioc-shortread/usr/lib/R/site-library
R CMD INSTALL -l /<>/debian/r-bioc-shortread/usr/lib/R/site-library 
--clean . "--built-timestamp='Mon, 18 Dec 2023 07:49:58 +0100'"
* installing *source* package ‘ShortRead’ ...
** using staged installation
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking for gzeof in -lz... yes
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking size of unsigned long... 8
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
using C++ compiler: ‘g++ (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/zlibbioc/include'  
  -fopenmp -fpic  -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Biostrings_stubs.c -o Biostrings_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/zlibbioc/include'  
  -fopenmp -fpic  -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c IRanges_stubs.c -o IRanges_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/zlibbioc/include'  
  -fopenmp -fpic  -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c R_init_ShortRead.c -o R_init_ShortRead.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/zlibbioc/include'  
  -fopenmp -fpic  -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c S4Vectors_stubs.c -o S4Vectors_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 

Bug#1071349: r-bioc-s4vectors: FTBFS: Rle_class.c:1136:17: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-s4vectors
Version: 0.40.2+dfsg-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-s4vectors/ -O--buildsystem=R
I: R Package: S4Vectors Version: 0.40.2
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Wed, 29 Nov 2023 17:40:04 +0100
mkdir -p 
/<>/r-bioc-s4vectors-0.40.2\+dfsg/debian/r-bioc-s4vectors/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/r-bioc-s4vectors-0.40.2\+dfsg/debian/r-bioc-s4vectors/usr/lib/R/site-library
 --clean . "--built-timestamp='Wed, 29 Nov 2023 17:40:04 +0100'"
* installing *source* package ‘S4Vectors’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c AEbufs.c -o AEbufs.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c DataFrame_class.c -o DataFrame_class.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Hits_class.c -o Hits_class.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c LLint_class.c -o LLint_class.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c List_class.c -o List_class.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c R_init_S4Vectors.c -o R_init_S4Vectors.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Rle_class.c -o Rle_class.o
Rle_class.c: In function ‘_subset_Rle_by_ranges’:
Rle_class.c:1136:17: error: format not a string literal and no format arguments 
[-Werror=format-security]
 1136 | error(errmsg);
  | ^
Rle_class.c: In function ‘_subset_Rle_by_positions’:
Rle_class.c:1161:17: error: format not a string literal and no format arguments 
[-Werror=format-security]
 1161 | error(errmsg);
  | ^
Rle_class.c: In function ‘Rle_extract_range’:
Rle_class.c:1190:17: error: format not a string literal and no format arguments 
[-Werror=format-security]
 1190 | error(errmsg);
  | ^
cc1: some warnings being treated as errors
make[1]: *** [/usr/lib/R/etc/Makeconf:195: Rle_class.o] Error 1
make[1]: Leaving directory '/<>/src'
make[1]: Entering directory '/<>/src'
make[1]: Leaving directory '/<>/src'
ERROR: compilation failed for package ‘S4Vectors’
* removing 
‘/<>/debian/r-bioc-s4vectors/usr/lib/R/site-library/S4Vectors’
dh_auto_install: error: R CMD INSTALL -l 
/<>/r-bioc-s4vectors-0.40.2\+dfsg/debian/r-bioc-s4vectors/usr/lib/R/site-library
 --clean . "--built-timestamp='Wed, 29 Nov 2023 17:40:04 +0100'" returned exit code 1
make: *** [debian/rules:4: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2

Bug#1071348: r-bioc-s4arrays: FTBFS: array_selection.c:352:17: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-s4arrays
Version: 1.2.0+dfsg-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-s4arrays/ -O--buildsystem=R
I: R Package: S4Arrays Version: 1.2.0
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Thu, 30 Nov 2023 00:16:36 +
mkdir -p 
/<>/r-bioc-s4arrays-1.2.0\+dfsg/debian/r-bioc-s4arrays/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/r-bioc-s4arrays-1.2.0\+dfsg/debian/r-bioc-s4arrays/usr/lib/R/site-library 
--clean . "--built-timestamp='Thu, 30 Nov 2023 00:16:36 +'"
* installing *source* package ‘S4Arrays’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c R_init_S4Arrays.c -o R_init_S4Arrays.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c S4Vectors_stubs.c -o S4Vectors_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c abind.c -o abind.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c array_selection.c -o array_selection.o
array_selection.c: In function ‘C_Lindex2Mindex’:
array_selection.c:352:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  352 | error(errmsg_buf());
  | ^
array_selection.c: In function ‘C_Mindex2Lindex’:
array_selection.c:416:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
  416 | error(errmsg_buf());
  | ^
cc1: some warnings being treated as errors
make[1]: *** [/usr/lib/R/etc/Makeconf:195: array_selection.o] Error 1
make[1]: Leaving directory '/<>/src'
make[1]: Entering directory '/<>/src'
make[1]: Leaving directory '/<>/src'
ERROR: compilation failed for package ‘S4Arrays’
* removing 
‘/<>/debian/r-bioc-s4arrays/usr/lib/R/site-library/S4Arrays’
dh_auto_install: error: R CMD INSTALL -l 
/<>/r-bioc-s4arrays-1.2.0\+dfsg/debian/r-bioc-s4arrays/usr/lib/R/site-library 
--clean . "--built-timestamp='Thu, 30 Nov 2023 00:16:36 +'" returned exit code 1
make: *** [debian/rules:4: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.



Bug#1071347: r-bioc-rtracklayer: FTBFS: handlers.c:10:11: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-rtracklayer
Version: 1.62.0-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
configure.ac:19: warning: AC_OUTPUT should be used without arguments.
configure.ac:19: You should run autoupdate.
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-rtracklayer/ -O--buildsystem=R
I: R Package: rtracklayer Version: 1.62.0
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Thu, 30 Nov 2023 18:23:42 +0100
mkdir -p 
/<>/debian/r-bioc-rtracklayer/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/debian/r-bioc-rtracklayer/usr/lib/R/site-library --clean . 
"--built-timestamp='Thu, 30 Nov 2023 18:23:42 +0100'"
* installing *source* package ‘rtracklayer’ ...
** using staged installation
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for openssl >= 1.0... no
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c S4Vectors_stubs.c -o S4Vectors_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c IRanges_stubs.c -o IRanges_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c XVector_stubs.c -o XVector_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c R_init_rtracklayer.c -o R_init_rtracklayer.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c readGFF.c -o readGFF.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c bbiHelper.c -o bbiHelper.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' 
-I'/usr/lib/R/site-library/XVector/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c bigWig.c -o bigWig.o
gcc -I"/usr/share/R/include" -DNDEBUG 

Bug#1071346: r-bioc-rsamtools: FTBFS: samtools_patch.c:37:13: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-rsamtools
Version: 2.18.0+dfsg-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-rsamtools/ -O--buildsystem=R
I: R Package: Rsamtools Version: 2.18.0
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Thu, 30 Nov 2023 11:30:31 +0100
mkdir -p 
/<>/r-bioc-rsamtools-2.18.0\+dfsg/debian/r-bioc-rsamtools/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/r-bioc-rsamtools-2.18.0\+dfsg/debian/r-bioc-rsamtools/usr/lib/R/site-library
 --clean . "--built-timestamp='Thu, 30 Nov 2023 11:30:31 +0100'"
* installing *source* package ‘Rsamtools’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
using C++ compiler: ‘g++ (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c Biostrings_stubs.c -o Biostrings_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c COMPAT_bcf_hdr_read.c -o COMPAT_bcf_hdr_read.o
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c IRanges_stubs.c -o IRanges_stubs.o
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c PileupBuffer.cpp -o PileupBuffer.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c PosCacheColl.cpp -o PosCacheColl.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 
-I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' 
-I'/usr/lib/R/site-library/Biostrings/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 

Bug#1071345: r-bioc-rhdf5: FTBFS: H5E.c:117:19: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-rhdf5
Version: 2.46.1+dfsg-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<>'
# see debian/hdf5-private/README
ln -s /<>/debian/hdf5-private/H5private.h   
/<>/src/H5private.h
ln -s /<>/debian/hdf5-private/H5TSprivate.h 
/<>/src/H5TSprivate.h
dh_auto_install # --no-parallel ... does not help
I: R Package: rhdf5 Version: 2.46.1
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Mon, 18 Dec 2023 13:37:02 +0100
mkdir -p 
/<>/r-bioc-rhdf5-2.46.1\+dfsg/debian/r-bioc-rhdf5/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/r-bioc-rhdf5-2.46.1\+dfsg/debian/r-bioc-rhdf5/usr/lib/R/site-library 
--clean . "--built-timestamp='Mon, 18 Dec 2023 13:37:02 +0100'"
* installing *source* package ‘rhdf5’ ...
** using staged installation
configure: creating ./config.status
config.status: creating src/external_filters.h
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
using C++ compiler: ‘g++ (Debian 13.2.0-25) 13.2.0’
make[2]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/Rhdf5lib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c H5.c -o H5.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/Rhdf5lib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c H5A.c -o H5A.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/Rhdf5lib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c H5D.c -o H5D.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/Rhdf5lib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c H5E.c -o H5E.o
H5E.c: In function ‘_rhdf5PrintErrorR’:
H5E.c:117:19: error: format not a string literal and no format arguments 
[-Werror=format-security]
  117 | error(str);
  |   ^~~
H5E.c:119:34: error: format not a string literal and no format arguments 
[-Werror=format-security]
  119 | error(client_data.txt[0]);
  |   ~~~^~~
H5E.c: In function ‘_rhdf5PrintErrorRcompact’:
H5E.c:149:19: error: format not a string literal and no format arguments 
[-Werror=format-security]
  149 | error(str);
  |   ^~~
H5E.c:151:34: error: format not a string literal and no format arguments 
[-Werror=format-security]
  151 | error(client_data.txt[0]);
  |   ~~~^~~
cc1: some warnings being treated as errors
make[2]: *** [/usr/lib/R/etc/Makeconf:195: H5E.o] Error 1
make[2]: Leaving directory '/<>/src'
make[2]: Entering directory '/<>/src'
make[2]: Leaving directory '/<>/src'
ERROR: compilation failed for package ‘rhdf5’
* removing ‘/<>/debian/r-bioc-rhdf5/usr/lib/R/site-library/rhdf5’
dh_auto_install: error: R CMD INSTALL -l 
/<>/r-bioc-rhdf5-2.46.1\+dfsg/debian/r-bioc-rhdf5/usr/lib/R/site-library 
--clean . "--built-timestamp='Mon, 18 Dec 2023 13:37:02 +0100'" returned exit code 1
make[1]: *** [debian/rules:10: override_dh_auto_install] Error 25
make[1]: Leaving directory '/<>'
make: *** [debian/rules:4: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with 

Bug#1071344: r-bioc-oligo: FTBFS: basecontent.c:54:15: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-oligo
Version: 1.66.0+ds-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<>'
dh_auto_install
I: R Package: oligo Version: 1.66.0
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Thu, 30 Nov 2023 17:58:01 +0100
mkdir -p 
/<>/r-bioc-oligo-1.66.0\+ds/debian/r-bioc-oligo/usr/lib/R/site-library
R CMD INSTALL -l 
/<>/r-bioc-oligo-1.66.0\+ds/debian/r-bioc-oligo/usr/lib/R/site-library --clean 
. "--built-timestamp='Thu, 30 Nov 2023 17:58:01 +0100'"
* installing *source* package ‘oligo’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[2]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/preprocessCore/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c DABG.c -o DABG.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/preprocessCore/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c ParserGzXYS.c -o ParserGzXYS.o
ParserGzXYS.c: In function ‘gzcountLines’:
ParserGzXYS.c:18:17: warning: passing argument 1 of ‘gzeof’ from incompatible 
pointer type [-Wincompatible-pointer-types]
   18 |   while (!gzeof(file)){
  | ^~~~
  | |
  | struct gzFile_s **
In file included from ParserGzXYS.c:4:
/usr/include/zlib.h:1598:34: note: expected ‘gzFile’ {aka ‘struct gzFile_s *’} 
but argument is of type ‘struct gzFile_s **’
 1598 | ZEXTERN int ZEXPORT gzeof(gzFile file);
  |   ~~~^~~~
ParserGzXYS.c:19:12: warning: passing argument 1 of ‘gzgets’ from incompatible 
pointer type [-Wincompatible-pointer-types]
   19 | gzgets(file, buffer, 1000);
  |^~~~
  ||
  |struct gzFile_s **
/usr/include/zlib.h:1494:38: note: expected ‘gzFile’ {aka ‘struct gzFile_s *’} 
but argument is of type ‘struct gzFile_s **’
 1494 | ZEXTERN char * ZEXPORT gzgets(gzFile file, char *buf, int len);
  |   ~~~^~~~
ParserGzXYS.c: In function ‘gzxys_header_field’:
ParserGzXYS.c:46:6: warning: assignment to ‘struct gzFile_s **’ from 
incompatible pointer type ‘gzFile’ {aka ‘struct gzFile_s *’} 
[-Wincompatible-pointer-types]
   46 |   fp = gzopen(currentFile, "rb");
  |  ^
ParserGzXYS.c:50:10: warning: passing argument 1 of ‘gzgets’ from incompatible 
pointer type [-Wincompatible-pointer-types]
   50 |   gzgets(fp, buffer, LINEMAX);
  |  ^~
  |  |
  |  struct gzFile_s **
/usr/include/zlib.h:1494:38: note: expected ‘gzFile’ {aka ‘struct gzFile_s *’} 
but argument is of type ‘struct gzFile_s **’
 1494 | ZEXTERN char * ZEXPORT gzgets(gzFile file, char *buf, int len);
  |   ~~~^~~~
ParserGzXYS.c:51:11: warning: passing argument 1 of ‘gzclose’ from incompatible 
pointer type [-Wincompatible-pointer-types]
   51 |   gzclose(fp);
  |   ^~
  |   |
  |   struct gzFile_s **
/usr/include/zlib.h:1634:39: note: expected ‘gzFile’ {aka ‘struct gzFile_s *’} 
but argument is of type ‘struct gzFile_s **’
 1634 | ZEXTERN int ZEXPORTgzclose(gzFile file);
  |~~~^~~~
ParserGzXYS.c: In function ‘R_read_gzxys_files’:
ParserGzXYS.c:134:6: warning: assignment to ‘struct gzFile_s **’ from 
incompatible pointer type ‘gzFile’ {aka ‘struct gzFile_s *’} 
[-Wincompatible-pointer-types]
  134 |   fp = gzopen(CHAR(STRING_ELT(filenames, 0)), "rb");
  |  ^
ParserGzXYS.c:138:11: warning: passing argument 1 of ‘gzclose’ from 
incompatible pointer type [-Wincompatible-pointer-types]
  138 |   gzclose(fp);
  |   ^~
  |   |
  |   struct gzFile_s **
/usr/include/zlib.h:1634:39: note: expected ‘gzFile’ {aka ‘struct gzFile_s *’} 
but argument is of type ‘struct gzFile_s **’
 1634 | ZEXTERN int ZEXPORTgzclose(gzFile file);
  |

Bug#1071340: r-bioc-affxparser: FTBFS: R_affx_cdf_parser.cpp:1099:17: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-affxparser
Version: 1.74.0-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<>'
dh_auto_install
I: R Package: affxparser Version: 1.74.0
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Wed, 29 Nov 2023 16:03:10 +0100
mkdir -p 
/<>/debian/r-bioc-affxparser/usr/lib/R/site-library
R CMD INSTALL -l /<>/debian/r-bioc-affxparser/usr/lib/R/site-library 
--clean . "--built-timestamp='Wed, 29 Nov 2023 16:03:10 +0100'"
* installing *source* package ‘affxparser’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
using C++ compiler: ‘g++ (Debian 13.2.0-25) 13.2.0’
make[2]: Entering directory '/<>/src'
rm -f fusion/calvin_files/data/src/CDFData.o 
fusion/calvin_files/data/src/CDFProbeGroupInformation.o 
fusion/calvin_files/data/src/CDFProbeInformation.o 
fusion/calvin_files/data/src/CDFProbeSetInformation.o 
fusion/calvin_files/data/src/CDFQCProbeInformation.o 
fusion/calvin_files/data/src/CDFQCProbeSetInformation.o 
fusion/calvin_files/data/src/CELData.o 
fusion/calvin_files/data/src/CHPBackgroundZone.o 
fusion/calvin_files/data/src/CHPData.o 
fusion/calvin_files/data/src/CHPExpressionEntry.o 
fusion/calvin_files/data/src/CHPMultiDataData.o 
fusion/calvin_files/data/src/CHPTilingData.o 
fusion/calvin_files/data/src/CHPQuantificationData.o 
fusion/calvin_files/data/src/CHPQuantificationDetectionData.o 
fusion/calvin_files/data/src/CHPGenotypeEntry.o 
fusion/calvin_files/data/src/CHPUniversalEntry.o 
fusion/calvin_files/data/src/ColumnInfo.o 
fusion/calvin_files/data/src/DataGroup.o 
fusion/calvin_files/data/src/DataGroupHeader.o 
fusion/calvin_files/data/src/DataSet.o 
fusion/calvin_files/data/src/DataSetHeader.o 
fusion/calvin_files/data/src/FileHeader.o 
fusion/calvin_files/data/src/GenericData.o 
fusion/calvin_files/data/src/GenericDataHeader.o 
fusion/calvin_files/exception/src/ExceptionBase.o 
fusion/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.o 
fusion/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.o 
fusion/calvin_files/fusion/src/FusionBPMAPData.o 
fusion/calvin_files/fusion/src/FusionCDFData.o 
fusion/calvin_files/fusion/src/FusionCDFQCProbeSetNames.o 
fusion/calvin_files/fusion/src/FusionCELData.o 
fusion/calvin_files/fusion/src/FusionCHPData.o 
fusion/calvin_files/fusion/src/FusionProbeSetResults.o 
fusion/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.o 
fusion/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.o 
fusion/calvin_files/fusion/src/FusionCHPLegacyData.o 
fusion/calvin_files/fusion/src/FusionCHPMultiDataAccessor.o 
fusion/calvin_files/fusion/src/FusionCHPMultiDataData.o 
fusion/calvin_files/fusion/src/FusionCHPTilingData.o 
fusion/calvin_files/fusion/src/FusionCHPGenericData.o 
fusion/calvin_files/fusion/src/FusionCHPQuantificationData.o 
fusion/calvin_files/fusion/src/FusionCHPQuantificationDetectionData.o 
fusion/calvin_files/parameter/src/ParameterNameValueType.o 
fusion/calvin_files/parsers/src/CDFFileReader.o 
fusion/calvin_files/parsers/src/CelFileReader.o 
fusion/calvin_files/parsers/src/CHPFileReader.o 
fusion/calvin_files/parsers/src/CHPMultiDataFileReader.o 
fusion/calvin_files/parsers/src/CHPTilingFileReader.o 
fusion/calvin_files/parsers/src/CHPQuantificationFileReader.o 
fusion/calvin_files/parsers/src/CHPQuantificationDetectionFileReader.o 
fusion/calvin_files/parsers/src/DataGroupHeaderReader.o 
fusion/calvin_files/parsers/src/DataGroupReader.o 
fusion/calvin_files/parsers/src/DataSetHeaderReader.o 
fusion/calvin_files/parsers/src/DataSetReader.o 
fusion/calvin_files/parsers/src/FileHeaderReader.o 
fusion/calvin_files/parsers/src/FileInput.o 
fusion/calvin_files/parsers/src/GenericDataHeaderReader.o 
fusion/calvin_files/parsers/src/GenericFileReader.o 
fusion/calvin_files/utils/src/AffymetrixGuid.o 
fusion/calvin_files/utils/src/DateTime.o 
fusion/calvin_files/utils/src/FileUtils.o 
fusion/calvin_files/utils/src/StringUtils.o 
fusion/calvin_files/utils/src/checksum.o fusion/file/BPMAPFileData.o 
fusion/file/BPMAPFileWriter.o fusion/file/CDFFileData.o 
fusion/file/CELFileData.o fusion/file/CHPFileData.o fusion/file/FileIO.o 
fusion/file/FileWriter.o fusion/file/TsvFile/ClfFile.o 
fusion/file/TsvFile/PgfFile.o fusion/file/TsvFile/TsvFile.o 
fusion/util/AffxByteArray.o fusion/util/AffxConv.o fusion/util/MsgStream.o 
fusion/util/Util.o 

Bug#1071343: r-bioc-hilbertvis: FTBFS: make_wiggle_vector.c:16:17: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-hilbertvis
Version: 1.60.0-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-hilbertvis/ -O--buildsystem=R
I: R Package: HilbertVis Version: 1.60.0
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Wed, 29 Nov 2023 20:56:28 +0100
mkdir -p 
/<>/debian/r-bioc-hilbertvis/usr/lib/R/site-library
R CMD INSTALL -l /<>/debian/r-bioc-hilbertvis/usr/lib/R/site-library 
--clean . "--built-timestamp='Wed, 29 Nov 2023 20:56:28 +0100'"
* installing *source* package ‘HilbertVis’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c hilbert.c -o hilbert.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c make_wiggle_vector.c -o make_wiggle_vector.o
make_wiggle_vector.c: In function ‘make_wiggle_vector’:
make_wiggle_vector.c:16:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
   16 |  error( buf );
  | ^~~
cc1: some warnings being treated as errors
make[1]: *** [/usr/lib/R/etc/Makeconf:195: make_wiggle_vector.o] Error 1
make[1]: Leaving directory '/<>/src'
make[1]: Entering directory '/<>/src'
make[1]: Leaving directory '/<>/src'
ERROR: compilation failed for package ‘HilbertVis’
* removing 
‘/<>/debian/r-bioc-hilbertvis/usr/lib/R/site-library/HilbertVis’
dh_auto_install: error: R CMD INSTALL -l 
/<>/debian/r-bioc-hilbertvis/usr/lib/R/site-library --clean . 
"--built-timestamp='Wed, 29 Nov 2023 20:56:28 +0100'" returned exit code 1
make: *** [debian/rules:4: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.



Bug#1071342: r-bioc-hdf5array: FTBFS: H5DSetDescriptor.c:1182:17: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-hdf5array
Version: 1.30.1-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-hdf5array/ -O--buildsystem=R
I: R Package: HDF5Array Version: 1.30.1
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Tue, 20 Feb 2024 14:26:16 +0100
mkdir -p /<>/debian/r-bioc-hdf5array/usr/lib/R/site-library
R CMD INSTALL -l /<>/debian/r-bioc-hdf5array/usr/lib/R/site-library 
--clean . "--built-timestamp='Tue, 20 Feb 2024 14:26:16 +0100'"
* installing *source* package ‘HDF5Array’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/Rhdf5lib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c S4Vectors_stubs.c -o S4Vectors_stubs.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/Rhdf5lib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c H5File.c -o H5File.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/Rhdf5lib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c global_errmsg_buf.c -o global_errmsg_buf.o
gcc -I"/usr/share/R/include" -DNDEBUG  
-I'/usr/lib/R/site-library/S4Vectors/include' 
-I'/usr/lib/R/site-library/Rhdf5lib/include' -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c H5DSetDescriptor.c -o H5DSetDescriptor.o
H5DSetDescriptor.c: In function ‘C_new_H5DSetDescriptor_xp’:
H5DSetDescriptor.c:1182:17: error: format not a string literal and no format 
arguments [-Werror=format-security]
 1182 | error(_HDF5Array_global_errmsg_buf());
  | ^
cc1: some warnings being treated as errors
make[1]: *** [/usr/lib/R/etc/Makeconf:195: H5DSetDescriptor.o] Error 1
make[1]: Leaving directory '/<>/src'
make[1]: Entering directory '/<>/src'
make[1]: Leaving directory '/<>/src'
ERROR: compilation failed for package ‘HDF5Array’
* removing 
‘/<>/debian/r-bioc-hdf5array/usr/lib/R/site-library/HDF5Array’
dh_auto_install: error: R CMD INSTALL -l 
/<>/debian/r-bioc-hdf5array/usr/lib/R/site-library --clean . 
"--built-timestamp='Tue, 20 Feb 2024 14:26:16 +0100'" returned exit code 1
make: *** [debian/rules:4: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.



Bug#1071341: r-bioc-genefilter: FTBFS: nd.c:75:21: error: format not a string literal and no format arguments

2024-05-17 Thread Santiago Vila

Package: src:r-bioc-genefilter
Version: 1.84.0-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-genefilter/ -O--buildsystem=R
I: R Package: genefilter Version: 1.84.0
I: Building using R version 4.4.0-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Thu, 30 Nov 2023 17:52:55 +0100
mkdir -p 
/<>/debian/r-bioc-genefilter/usr/lib/R/site-library
R CMD INSTALL -l /<>/debian/r-bioc-genefilter/usr/lib/R/site-library 
--clean . "--built-timestamp='Thu, 30 Nov 2023 17:52:55 +0100'"
* installing *source* package ‘genefilter’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Debian 13.2.0-25) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-25) 13.2.0’
using C++ compiler: ‘g++ (Debian 13.2.0-25) 13.2.0’
make[1]: Entering directory '/<>/src'
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2   -c half_range_mode.cpp -o half_range_mode.o
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ 
is not valid for C++
half_range_mode.cpp: In function ‘double half_range_mode(double*, double*, 
double, int)’:
half_range_mode.cpp:100:60: warning: format ‘%i’ expects argument of type ‘int’, but 
argument 5 has type ‘std::vector::size_type’ {aka ‘long unsigned int’} 
[-Wformat=]
  100 | if (diag) Rprintf( "N = %i, N'' = %i, w = %.4f, |J| = %i\n", N, 
N_double_prime, w, J.size() );
  |   ~^
   
  ||
 |
  |int
   std::vector::size_type {aka long unsigned int}
  |   %li
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c init.c -o init.o
gcc -I"/usr/share/R/include" -DNDEBUG   -fpic  -g -O2 
-Werror=implicit-function-declaration 
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.0=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2  -c nd.c -o nd.o
nd.c: In function ‘detectTies’:
nd.c:75:21: error: format not a string literal and no format arguments 
[-Werror=format-security]
   75 | warning(msg_buf);
  | ^~~
cc1: some warnings being treated as errors
make[1]: *** [/usr/lib/R/etc/Makeconf:195: nd.o] Error 1
make[1]: Leaving directory '/<>/src'
make[1]: Entering directory '/<>/src'
make[1]: Leaving directory '/<>/src'
ERROR: compilation failed for package ‘genefilter’
* removing 
‘/<>/debian/r-bioc-genefilter/usr/lib/R/site-library/genefilter’
dh_auto_install: error: R CMD INSTALL -l 
/<>/debian/r-bioc-genefilter/usr/lib/R/site-library --clean . 
"--built-timestamp='Thu, 30 Nov 2023 17:52:55 +0100'" returned exit code 1
make: *** [debian/rules:4: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.



Bug#1071339: qrisk2: FTBFS: include/clinrisk/utils.h:42:6: error: conflicting types for ‘strlcat’

2024-05-17 Thread Santiago Vila

Package: src:qrisk2
Version: 0.1.20150729-5
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<>'
mkdir -p lib
mkdir -p executables
dh_auto_build
make -j2 "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<>'
makedepend -- -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -- -I 
/usr/include/linux -I include c/Q80_model_4_0.c c/Q80_model_4_1.c c/utils.c
gcc -I include -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2 -c c/Q80_model_4_0.c -o c/Q80_model_4_0.o
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 27): cannot 
find include file "bits/libc-header-start.h"
not in /usr/include/linux/bits/libc-header-start.h
not in include/bits/libc-header-start.h
not in /usr/include/bits/libc-header-start.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 37): cannot 
find include file "bits/types.h"
not in /usr/include/linux/bits/types.h
not in include/bits/types.h
not in /usr/include/bits/types.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 40): cannot 
find include file "bits/math-vector.h"
not in /usr/include/linux/bits/math-vector.h
not in include/bits/math-vector.h
not in /usr/include/bits/math-vector.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 43): cannot 
find include file "bits/floatn.h"
not in /usr/include/linux/bits/floatn.h
not in include/bits/floatn.h
not in /usr/include/bits/floatn.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 152): cannot 
find include file "bits/flt-eval-method.h"
not in /usr/include/linux/bits/flt-eval-method.h
not in include/bits/flt-eval-method.h
not in /usr/include/bits/flt-eval-method.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 204): cannot 
find include file "bits/fp-logb.h"
not in /usr/include/linux/bits/fp-logb.h
not in include/bits/fp-logb.h
not in /usr/include/bits/fp-logb.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 247): cannot 
find include file "bits/fp-fast.h"
not in /usr/include/linux/bits/fp-fast.h
not in include/bits/fp-fast.h
not in /usr/include/bits/fp-fast.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 312): cannot 
find include file "bits/mathcalls-helper-functions.h"
not in /usr/include/linux/bits/mathcalls-helper-functions.h
not in include/bits/mathcalls-helper-functions.h
not in /usr/include/bits/mathcalls-helper-functions.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 313): cannot 
find include file "bits/mathcalls.h"
not in /usr/include/linux/bits/mathcalls.h
not in include/bits/mathcalls.h
not in /usr/include/bits/mathcalls.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 566): cannot 
find include file "bits/mathcalls-narrow.h"
not in /usr/include/linux/bits/mathcalls-narrow.h
not in include/bits/mathcalls-narrow.h
not in /usr/include/bits/mathcalls-narrow.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 587): cannot 
find include file "bits/mathcalls-narrow.h"
not in /usr/include/linux/bits/mathcalls-narrow.h
not in include/bits/mathcalls-narrow.h
not in /usr/include/bits/mathcalls-narrow.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 616): cannot 
find include file "bits/mathcalls-narrow.h"
not in /usr/include/linux/bits/mathcalls-narrow.h
not in include/bits/mathcalls-narrow.h
not in /usr/include/bits/mathcalls-narrow.h
makedepend: warning:  c/Q80_model_4_0.c (reading /usr/include/math.h, line 1055): cannot 
find include file "bits/iscanonical.h"
not in /usr/include/linux/bits/iscanonical.h
not in include/bits/iscanonical.h
not in /usr/include/bits/iscanonical.h
gcc -I include -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2 -c c/Q80_model_4_1.c -o c/Q80_model_4_1.o
In file included from c/Q80_model_4_1.c:41:

Bug#1071338: python-numpysane: FTBFS: test/testlib_pywrap_GENERATED.c:24:10: fatal error: numpy/arrayobject.h: No such file or directory

2024-05-17 Thread Santiago Vila

Package: src:python-numpysane
Version: 0.40-3
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build --with python3 --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.12 setup.py config
WARNING: '.' not a valid package name; please use only .-separated package 
names in setup.py
running config
I: pybuild base:311: python3.11 setup.py config
WARNING: '.' not a valid package name; please use only .-separated package 
names in setup.py
running config
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<>'
make README README-pywrap
make[2]: Entering directory '/<>'
python3 extract_README.py numpysane README.org README README.footer.org
python3 extract_README.py numpysane_pywrap README-pywrap.org README-pywrap 
README.footer.org
make[2]: Leaving directory '/<>'
dh_auto_build
I: pybuild base:311: /usr/bin/python3.12 setup.py build
WARNING: '.' not a valid package name; please use only .-separated package 
names in setup.py
running build
running build_py
copying numpysane.py -> /<>/.pybuild/cpython3_3.12_numpysane/build
copying numpysane_pywrap.py -> 
/<>/.pybuild/cpython3_3.12_numpysane/build
copying extract_README.py -> 
/<>/.pybuild/cpython3_3.12_numpysane/build
creating 
/<>/.pybuild/cpython3_3.12_numpysane/build/pywrap-templates
copying pywrap-templates/pywrap_module_footer_generic.c -> 
/<>/.pybuild/cpython3_3.12_numpysane/build/pywrap-templates
copying pywrap-templates/pywrap_function_generic.c -> 
/<>/.pybuild/cpython3_3.12_numpysane/build/pywrap-templates
copying pywrap-templates/pywrap_module_header.c -> 
/<>/.pybuild/cpython3_3.12_numpysane/build/pywrap-templates
I: pybuild base:311: /usr/bin/python3 setup.py build
WARNING: '.' not a valid package name; please use only .-separated package 
names in setup.py
running build
running build_py
copying numpysane.py -> /<>/.pybuild/cpython3_3.11_numpysane/build
copying numpysane_pywrap.py -> 
/<>/.pybuild/cpython3_3.11_numpysane/build
copying extract_README.py -> 
/<>/.pybuild/cpython3_3.11_numpysane/build
creating 
/<>/.pybuild/cpython3_3.11_numpysane/build/pywrap-templates
copying pywrap-templates/pywrap_module_footer_generic.c -> 
/<>/.pybuild/cpython3_3.11_numpysane/build/pywrap-templates
copying pywrap-templates/pywrap_function_generic.c -> 
/<>/.pybuild/cpython3_3.11_numpysane/build/pywrap-templates
copying pywrap-templates/pywrap_module_header.c -> 
/<>/.pybuild/cpython3_3.11_numpysane/build/pywrap-templates
make[1]: Leaving directory '/<>'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<>'
make test3
make[2]: Entering directory '/<>'
./test/genpywrap.py > test/testlib_pywrap_GENERATED.c
cc -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g 
-Wno-missing-field-initializers -Wsign-compare -DNDEBUG -g -fwrapv -Wall -g 
-Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection 
-Wformat -Werror=format-security -fcf-protection -fPIC -I/usr/include/python3.11 
-Wno-cast-function-type -Wdate-time -D_FORTIFY_SOURCE=2  -c -o 
test/testlib_pywrap_GENERATED.o test/testlib_pywrap_GENERATED.c
test/testlib_pywrap_GENERATED.c:24:10: fatal error: numpy/arrayobject.h: No 
such file or directory
   24 | #include 
  |  ^
compilation terminated.
make[2]: *** [: test/testlib_pywrap_GENERATED.o] Error 1
make[2]: Leaving directory '/<>'
make[1]: *** [debian/rules:22: override_dh_auto_test] Error 2
make[1]: Leaving directory '/<>'
make: *** [debian/rules:6: build] Error 2
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.



Bug#1071337: pynn: FTBFS: ERROR: unittests.test_recording.test_get

2024-05-17 Thread Santiago Vila

Package: src:pynn
Version: 0.10.1-3
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --with python3 --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.12 setup.py config
running config
I: pybuild base:311: python3.11 setup.py config
running config
   dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.12 setup.py build
running build
running build_py
creating /<>/.pybuild/cpython3_3.12_pynn/build/pyNN

[... snipped ...]

test_repr (unittests.test_assembly.AssemblyTest.test_repr) ... ok
test_sample (unittests.test_assembly.AssemblyTest.test_sample) ... ok
test_save_positions (unittests.test_assembly.AssemblyTest.test_save_positions) 
... ok
test_size_property (unittests.test_assembly.AssemblyTest.test_size_property) 
... ok
test_connect_with_array_weights 
(unittests.test_connectors_parallel.TestAllToAllConnector.test_connect_with_array_weights)
 ... ok
test_connect_with_delays_None 
(unittests.test_connectors_parallel.TestAllToAllConnector.test_connect_with_delays_None)
 ... ok
test_connect_with_delays_too_small 
(unittests.test_connectors_parallel.TestAllToAllConnector.test_connect_with_delays_too_small)
 ... SKIP: skipping this test until refactoring of delay checks is complete
test_connect_with_distance_dependent_weights 
(unittests.test_connectors_parallel.TestAllToAllConnector.test_connect_with_distance_dependent_weights)
 ... ok
test_connect_with_distance_dependent_weights_and_delays 
(unittests.test_connectors_parallel.TestAllToAllConnector.test_connect_with_distance_dependent_weights_and_delays)
 ... ok
test_connect_with_list_delays_too_small 
(unittests.test_connectors_parallel.TestAllToAllConnector.test_connect_with_list_delays_too_small)
 ... SKIP: skipping this tests until refactoring of delay checks is complete
test_connect_with_random_weights_parallel_safe 
(unittests.test_connectors_parallel.TestAllToAllConnector.test_connect_with_random_weights_parallel_safe)
 ... ok
test_connect_with_scalar_weights_and_delays 
(unittests.test_connectors_parallel.TestAllToAllConnector.test_connect_with_scalar_weights_and_delays)
 ... ok
test_connect_with_random_weights_parallel_safe 
(unittests.test_connectors_parallel.TestArrayConnector.test_connect_with_random_weights_parallel_safe)
 ... ok
test_connect_with_scalar_weights_and_delays 
(unittests.test_connectors_parallel.TestArrayConnector.test_connect_with_scalar_weights_and_delays)
 ... ok
test_connect 
(unittests.test_connectors_parallel.TestCloneConnector.test_connect) ... ok
test_connect_with_pre_post_mismatch 
(unittests.test_connectors_parallel.TestCloneConnector.test_connect_with_pre_post_mismatch)
 ... ok
test_connect 
(unittests.test_connectors_parallel.TestDisplacementDependentProbabilityConnector.test_connect)
 ... ok
test_connect_with_default_args 
(unittests.test_connectors_parallel.TestDistanceDependentProbabilityConnector.test_connect_with_default_args)
 ... ok
test_with_n_larger_than_population_size 
(unittests.test_connectors_parallel.TestFixedNumberPostConnector.test_with_n_larger_than_population_size)
 ... ok
test_with_n_larger_than_population_size_no_self_connections 
(unittests.test_connectors_parallel.TestFixedNumberPostConnector.test_with_n_larger_than_population_size_no_self_connections)
 ... ok
test_with_n_smaller_than_population_size 
(unittests.test_connectors_parallel.TestFixedNumberPostConnector.test_with_n_smaller_than_population_size)
 ... ok
test_with_replacement 
(unittests.test_connectors_parallel.TestFixedNumberPostConnector.test_with_replacement)
 ... ok
test_with_replacement_no_self_connections 
(unittests.test_connectors_parallel.TestFixedNumberPostConnector.test_with_replacement_no_self_connections)
 ... ok
test_with_replacement_with_variable_n 
(unittests.test_connectors_parallel.TestFixedNumberPostConnector.test_with_replacement_with_variable_n)
 ... ok
test_no_replacement_no_self_connections 
(unittests.test_connectors_parallel.TestFixedNumberPreConnector.test_no_replacement_no_self_connections)
 ... ok
test_no_replacement_parallel_unsafe 
(unittests.test_connectors_parallel.TestFixedNumberPreConnector.test_no_replacement_parallel_unsafe)
 ... ok
test_with_n_larger_than_population_size 
(unittests.test_connectors_parallel.TestFixedNumberPreConnector.test_with_n_larger_than_population_size)
 ... ok
test_with_n_larger_than_population_size_no_self_connections 
(unittests.test_connectors_parallel.TestFixedNumberPreConnector.test_with_n_larger_than_population_size_no_self_connections)
 ... ok
test_with_n_smaller_than_population_size 
(unittests.test_connectors_parallel.TestFixedNumberPreConnector.test_with_n_smaller_than_population_size)
 ... ok

Bug#1071336: psensor: FTBFS: FAIL test-cppcheck.sh

2024-05-17 Thread Santiago Vila

Package: src:psensor
Version: 1.1.5-1.4
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build --with=autoreconf
dh: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_update_autotools_config
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
   dh_autoreconf
Creating directory m4
Copying file m4/codeset.m4
Copying file m4/gettext.m4
Copying file m4/glibc2.m4
Copying file m4/glibc21.m4
Copying file m4/iconv.m4
Copying file m4/intdiv0.m4
Copying file m4/intl.m4
Copying file m4/intldir.m4
Copying file m4/intmax.m4
Copying file m4/inttypes-pri.m4
Copying file m4/inttypes_h.m4
Copying file m4/lcmessage.m4
Copying file m4/lib-ld.m4
Copying file m4/lib-link.m4
Copying file m4/lib-prefix.m4
Copying file m4/lock.m4
Copying file m4/longdouble.m4
Copying file m4/longlong.m4
Copying file m4/nls.m4
Copying file m4/po.m4
Copying file m4/printf-posix.m4
Copying file m4/progtest.m4
Copying file m4/size_max.m4
Copying file m4/stdint_h.m4
Copying file m4/uintmax_t.m4
Copying file m4/ulonglong.m4
Copying file m4/visibility.m4
Copying file m4/wchar_t.m4
Copying file m4/wint_t.m4
Copying file m4/xsize.m4
Copying file po/Makevars.template
configure.ac:30: warning: AM_PROG_MKDIR_P: this macro is deprecated, and will 
soon be removed.
configure.ac:30: You should use the Autoconf-provided 'AC_PROG_MKDIR_P' macro 
instead,
configure.ac:30: and use '$(MKDIR_P)' instead of '$(mkdir_p)'in your 
Makefile.am files.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:1237: AM_PROG_MKDIR_P is expanded from...
m4/po.m4:23: AM_PO_SUBDIRS is expanded from...
m4/gettext.m4:57: AM_GNU_GETTEXT is expanded from...
configure.ac:30: the top level
configure.ac:30: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:30: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from...
m4/gettext.m4:365: gt_INTL_MACOSX is expanded from...
m4/gettext.m4:57: AM_GNU_GETTEXT is expanded from...
configure.ac:30: the top level
configure.ac:30: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:30: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from...
m4/gettext.m4:57: AM_GNU_GETTEXT is expanded from...
configure.ac:30: the top level
configure.ac:30: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:30: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from...
m4/iconv.m4:20: AM_ICONV_LINK is expanded from...
m4/gettext.m4:57: AM_GNU_GETTEXT is expanded from...
configure.ac:30: the top level
configure.ac:30: warning: The 'AM_PROG_MKDIR_P' macro is deprecated, and its 
use is discouraged.
configure.ac:30: You should use the Autoconf-provided 'AC_PROG_MKDIR_P' macro 
instead,
configure.ac:30: and use '$(MKDIR_P)' instead of '$(mkdir_p)'in your 
Makefile.am files.
   dh_auto_configure
dh_auto_configure: warning: Compatibility levels before 10 are deprecated 
(level 9 in use)
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu 
--libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode 
--disable-dependency-tracking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes

Bug#1071335: pptpd: FTBFS: our_syslog.h:38:62: error: implicit declaration of function ‘strerror’

2024-05-17 Thread Santiago Vila

Package: src:pptpd
Version: 1.4.0-13
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
autoreconf: warning: autoconf input should be named 'configure.ac', not 
'configure.in'
aclocal: warning: autoconf input should be named 'configure.ac', not 
'configure.in'
configure.in:3: warning: 'AM_CONFIG_HEADER': this macro is obsolete.
configure.in:3: You should use the 'AC_CONFIG_HEADERS' macro instead.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:745: AM_CONFIG_HEADER is expanded from...
configure.in:3: the top level
configure.in:4: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are 
deprecated.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:429: AM_INIT_AUTOMAKE is expanded from...
configure.in:4: the top level
configure.in:153: warning: The macro `AC_TRY_LINK' is obsolete.
configure.in:153: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from...
configure.in:153: the top level
configure.in:153: warning: The macro `AC_TRY_LINK' is obsolete.
configure.in:153: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from...
./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from...
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from...
configure.in:153: the top level
configure.in:240: warning: The macro `AC_CHECKING' is obsolete.
configure.in:240: You should run autoupdate.
./lib/autoconf/general.m4:2499: AC_CHECKING is expanded from...
configure.in:240: the top level
configure.in:296: warning: AC_OUTPUT should be used without arguments.
configure.in:296: You should run autoupdate.
autoheader: warning: autoconf input should be named 'configure.ac', not 
'configure.in'
autoheader: warning: WARNING: Using auxiliary files such as 'acconfig.h', 
'config.h.bot'
autoheader: WARNING: and 'config.h.top', to define templates for 'config.h.in'
autoheader: WARNING: is deprecated and discouraged.
autoheader:
autoheader: WARNING: Using the third argument of 'AC_DEFINE_UNQUOTED' and
autoheader: WARNING: 'AC_DEFINE' allows one to define a template without
autoheader: WARNING: 'acconfig.h':
autoheader:
autoheader: WARNING:   AC_DEFINE([NEED_FUNC_MAIN], 1,
autoheader: [Define if a function 'main' is needed.])
autoheader:
autoheader: WARNING: More sophisticated templates can also be produced, see the
autoheader: WARNING: documentation.
automake: warning: autoconf input should be named 'configure.ac', not 
'configure.in'
configure.in:4: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are 
deprecated.  For more info, see:
configure.in:4: 
https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.in:109: installing './compile'
Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or 
'*_CPPFLAGS')
automake: warning: autoconf input should be named 'configure.ac', not 
'configure.in'
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- \
--prefix=/usr \
--mandir=/usr/share/man \
--with-libwrap \
--enable-bcrelay
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking --prefix=/usr 
--mandir=/usr/share/man --with-libwrap --enable-bcrelay
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking command line for use of BSD PPP... default standard pppd
checking command line for use of SLIRP... default no
checking command line for syslog facility name... default LOG_DAEMON
checking command line for bcrelay build... yes
checking command line for VRF build... default no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...

Bug#1071333: pigx-rnaseq: FTBFS: ERROR: could not find report for SALMON at transcript level

2024-05-17 Thread Santiago Vila

Package: src:pigx-rnaseq
Version: 0.1.0-1.1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   debian/rules execute_before_dh_autoreconf
make[1]: Entering directory '/<>'
mkdir -p /<>/pigx-common
cp -a debian/common /<>/pigx-common
make[1]: Leaving directory '/<>'
   dh_autoreconf
find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o 
-path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a  -type f -exec md5sum {} + -o 
-type l -printf "symlink  %p
" > debian/autoreconf.before
grep -q ^XDT_ configure.ac
autoreconf -f -i
aclocal: warning: couldn't open directory 'm4': No such file or directory

[... snipped ...]

rule index_bam:
input: 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam
output: 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam.bai
log: /<>/tests/output/logs/samtools_index_UHR_Rep2.log
jobid: 35
reason: Missing output files: 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam.bai;
 Input files updated by another job: 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam
wildcards: sample=UHR_Rep2
resources: tmpdir=/tmp, mem_mb=500, mem_mib=477

/usr/bin/samtools  index /<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam.bai >> 
/<>/tests/output/logs/samtools_index_UHR_Rep2.log 2>&1
[Fri May 17 17:27:28 2024]
Finished job 39.
18 of 48 steps (38%) done
Select jobs to execute...

[Fri May 17 17:27:28 2024]
rule coverage_megadepth:
input: 
/<>/tests/output/mapped_reads/hisat2/HBR_Rep2_Aligned.sortedByCoord.out.bam, 
/<>/tests/output/mapped_reads/hisat2/HBR_Rep2_Aligned.sortedByCoord.out.bam.bai
output: 
/<>/tests/output/bigwig_files/hisat2/megadepth/HBR_Rep2.all.bw
log: 
/<>/tests/output/logs/hisat2/coverage_megadepth.HBR_Rep2.log
jobid: 40
reason: Missing output files: 
/<>/tests/output/bigwig_files/hisat2/megadepth/HBR_Rep2.all.bw; Input files updated by 
another job: 
/<>/tests/output/mapped_reads/hisat2/HBR_Rep2_Aligned.sortedByCoord.out.bam.bai, 
/<>/tests/output/mapped_reads/hisat2/HBR_Rep2_Aligned.sortedByCoord.out.bam
wildcards: sample=HBR_Rep2
resources: tmpdir=/tmp, mem_mb=4000, mem_mib=3815, threads=2


/usr/bin/megadepth  /<>/tests/output/mapped_reads/hisat2/HBR_Rep2_Aligned.sortedByCoord.out.bam 
--threads 2 --bigwig --prefix /<>/tests/output/bigwig_files/hisat2/megadepth/HBR_Rep2 >> 
/<>/tests/output/logs/hisat2/coverage_megadepth.HBR_Rep2.log 2>&1

[Fri May 17 17:27:28 2024]

Finished job 35.
19 of 48 steps (40%) done
Select jobs to execute...

[Fri May 17 17:27:28 2024]
rule coverage_megadepth:
input: 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep3_Aligned.sortedByCoord.out.bam, 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep3_Aligned.sortedByCoord.out.bam.bai
output: 
/<>/tests/output/bigwig_files/hisat2/megadepth/UHR_Rep3.all.bw
log: 
/<>/tests/output/logs/hisat2/coverage_megadepth.UHR_Rep3.log
jobid: 44
reason: Missing output files: 
/<>/tests/output/bigwig_files/hisat2/megadepth/UHR_Rep3.all.bw; Input files updated by 
another job: 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep3_Aligned.sortedByCoord.out.bam.bai, 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep3_Aligned.sortedByCoord.out.bam
wildcards: sample=UHR_Rep3
resources: tmpdir=/tmp, mem_mb=4000, mem_mib=3815, threads=2


/usr/bin/megadepth  /<>/tests/output/mapped_reads/hisat2/UHR_Rep3_Aligned.sortedByCoord.out.bam 
--threads 2 --bigwig --prefix /<>/tests/output/bigwig_files/hisat2/megadepth/UHR_Rep3 >> 
/<>/tests/output/logs/hisat2/coverage_megadepth.UHR_Rep3.log 2>&1

[Fri May 17 17:27:28 2024]

Finished job 40.
20 of 48 steps (42%) done
Select jobs to execute...

[Fri May 17 17:27:28 2024]
rule count_reads:
input: 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam, 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam.bai
output: 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2.read_counts.csv
log: /<>/tests/output/logs/hisat2/UHR_Rep2.count_reads.log
jobid: 34
reason: Missing output files: 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2.read_counts.csv; Input files updated by 
another job: /<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam, 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam.bai
wildcards: sample=UHR_Rep2
resources: tmpdir=/tmp, mem_mb=6000, mem_mib=5723

/usr/bin/Rscript --vanilla /<>/scripts//count_reads.R UHR_Rep2 
/<>/tests/output/mapped_reads/hisat2/UHR_Rep2_Aligned.sortedByCoord.out.bam 

Bug#1071334: pixz: FTBFS: FAIL cppcheck-src.sh

2024-05-17 Thread Santiago Vila

Package: src:pixz
Version: 1.0.7-2
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
configure.ac:14: warning: The macro `AC_PROG_CC_STDC' is obsolete.
configure.ac:14: You should run autoupdate.
./lib/autoconf/c.m4:1666: AC_PROG_CC_STDC is expanded from...
configure.ac:14: the top level
configure.ac:14: installing './compile'
configure.ac:47: installing './config.guess'
configure.ac:47: installing './config.sub'
configure.ac:11: installing './install-sh'
configure.ac:11: installing './missing'
src/Makefile.am: installing './depcomp'
parallel-tests: installing './test-driver'
   dh_auto_configure
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports the include directive... yes (GNU style)
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking for src/pixz.1... no
checking for a2x... a2x
checking for ceil in -lm... yes
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking if compiler needs -Werror to reject unknown flags... no
checking for the pthreads library -lpthreads... no
checking whether pthreads work without any flags... yes
checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
checking if more special flags are required for pthreads... no
checking for PTHREAD_PRIO_INHERIT... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for libarchive... yes
checking for liblzma... yes
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for fcntl.h... yes
checking for stdint.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for unistd.h... (cached) yes
checking for off_t... yes
checking for size_t... yes
checking for ssize_t... yes
checking for uint16_t... yes
checking for uint32_t... yes
checking for uint64_t... yes
checking for uint8_t... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for GNU libc compatible malloc... yes
checking for GNU libc compatible realloc... yes
checking for working strtod... yes
checking for memchr... yes
checking for memmove... yes
checking for memset... yes
checking for strerror... yes
checking for strtol... yes
checking for gcc options needed to detect all undeclared functions... none 
needed
checking for sys/endian.h... no
checking for endian.h... yes
checking whether htole64 is declared... yes
checking whether le64toh is declared... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating test/Makefile
config.status: creating config.h
config.status: executing depfiles commands
   dh_auto_build
make -j2
make[1]: Entering directory '/<>'
make  all-recursive
make[2]: Entering directory '/<>'
Making all in src
make[3]: Entering directory '/<>/src'
gcc -DHAVE_CONFIG_H -I. -I..-Wdate-time -D_FORTIFY_SOURCE=2  -Wall -Wno-unknown-pragmas 
-g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o 
pixz-common.o `test -f 'common.c' || echo './'`common.c
gcc -DHAVE_CONFIG_H -I. -I..-Wdate-time -D_FORTIFY_SOURCE=2  -Wall -Wno-unknown-pragmas 
-g -O2 -Werror=implicit-function-declaration 

Bug#1071332: ola: FTBFS: plugins/osc/OSCNode.cpp:153:28: error: cannot convert ‘lo_arg*’ to ‘lo_blob’

2024-05-17 Thread Santiago Vila

Package: src:ola
Version: 0.10.9.nojsmin-4.1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build --parallel --with bash_completion,python3
   dh_update_autotools_config
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
   dh_autoreconf
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'.
libtoolize: copying file 'config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'config'.
libtoolize: copying file 'config/libtool.m4'
libtoolize: copying file 'config/ltoptions.m4'
libtoolize: copying file 'config/ltsugar.m4'
libtoolize: copying file 'config/ltversion.m4'
libtoolize: copying file 'config/lt~obsolete.m4'

[... snipped ...]

/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
In file included from ./olad/OlaServer.h:36:
./include/ola/rdm/PidStore.h:172:8: warning: ‘template class 
std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead 
[-Wdeprecated-declarations]
  172 |   std::auto_ptr m_esta_store;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:181:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  181 |   std::auto_ptr m_our_export_map;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:185:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  185 |   std::auto_ptr m_device_manager;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:186:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  186 |   std::auto_ptr m_plugin_manager;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:187:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  187 |   std::auto_ptr m_plugin_adaptor;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:188:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  188 |   std::auto_ptr m_universe_store;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:189:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  189 |   std::auto_ptr m_port_manager;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:190:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  190 |   std::auto_ptr m_service_impl;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:191:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  191 |   std::auto_ptr m_broker;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:192:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  192 |   std::auto_ptr m_port_broker;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |^~~~
./olad/OlaServer.h:193:8: warning: ‘template class std::auto_ptr’ is 
deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  193 |   std::auto_ptr m_pid_store;
  |^~~~
/usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here
   65 |   template class auto_ptr;
  |

Bug#1071331: netcdf-parallel: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file

2024-05-17 Thread Santiago Vila

Package: src:netcdf-parallel
Version: 1:4.9.0-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build --buildsystem=cmake
   dh_update_autotools_config -O--buildsystem=cmake
cp -an --reflink=auto config.guess 
debian/.debhelper/bucket/files/af8a1922c9b3c240bf2119d4ec0965a0b5ec36b1016017ba66db44b3b53e9cea.tmp
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
mv 
debian/.debhelper/bucket/files/af8a1922c9b3c240bf2119d4ec0965a0b5ec36b1016017ba66db44b3b53e9cea.tmp
 
debian/.debhelper/bucket/files/af8a1922c9b3c240bf2119d4ec0965a0b5ec36b1016017ba66db44b3b53e9cea
cp -f /usr/share/misc/config.guess ./config.guess
cp -an --reflink=auto config.sub 
debian/.debhelper/bucket/files/d611751fba98e807c9684d253bb02aa73d6825fe0e0b9ae3cbf258a59171c9b0.tmp
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
mv 
debian/.debhelper/bucket/files/d611751fba98e807c9684d253bb02aa73d6825fe0e0b9ae3cbf258a59171c9b0.tmp
 
debian/.debhelper/bucket/files/d611751fba98e807c9684d253bb02aa73d6825fe0e0b9ae3cbf258a59171c9b0
cp -f /usr/share/misc/config.sub ./config.sub
   dh_autoreconf -O--buildsystem=cmake
find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o 
-path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a  -type f -exec md5sum {} + -o 
-type l -printf "symlink  %p
" > debian/autoreconf.before

[... snipped ...]

-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/nc4attr_8c_source.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dvarget_8c.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/nc4hdf_8c__incl.md5
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/netcdf_8h_source.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/nc4cache_8c__incl.png
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dattget_8c__incl.md5
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/ddim_8c__incl.map
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dvarinq_8c__incl.png
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/folderopen.svg
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dvar_8c__incl.png
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dattinq_8c__incl.md5
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dparallel_8c.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/groups.png
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dv2i_8c__incl.map
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/netcdf__mem_8h.js
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dv2i_8c__incl.md5
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/tab_sd.png
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dcopy_8c__incl.md5
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/minus.svg
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/doxygen.css
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/simple__xy__rd_8c__incl.map
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dynsections.js
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/programming_notes.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dir_d28a4824dc47e487b107a5db32ef43c4_dep.md5
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/winbin.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dfilter_8c__incl.png
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dvlen_8c_source.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/sfc_pres_temp_rd_8c-example.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dattput_8c.js
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/netcdf__mem_8h__dep__incl.map
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/nc4cache_8c.js
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dv2i_8c__incl.png
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/ddim_8c__incl.png
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/navtreedata.js
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/plusd.svg
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/netcdf_8h__dep__incl.map
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/globals_defs_a.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/faq.html
-- Installing: 
/<>/debian/tmp-pnetcdf/usr/share/doc/netCDF/html/dir_2bd793205e25d08e0098c0a87f212831_dep.png
-- Installing: 

Bug#1071330: msgraph: FTBFS: (/<>/obj-x86_64-linux-gnu/tests/user:641808): GLib-Net-WARNING **: 17:38:49.590: Failed to load TLS database: System trust contains zero trusted certificates;

2024-05-17 Thread Santiago Vila

Package: src:msgraph
Version: 0.2.1-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure
cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 
meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc 
--localstatedir=/var --libdir=lib/x86_64-linux-gnu -Dpython.bytecompile=-1
The Meson build system
Version: 1.4.0
Source dir: /<>
Build dir: /<>/obj-x86_64-linux-gnu
Build type: native build
Project name: msgraph
Project version: 0.2.1
C compiler for the host machine: cc (gcc 13.2.0 "cc (Debian 13.2.0-25) 13.2.0")
C linker for the host machine: cc ld.bfd 2.42
Host machine cpu family: x86_64
Host machine cpu: x86_64
Found pkg-config: YES (/usr/bin/pkg-config) 1.8.1
Run-time dependency glib-2.0 found: YES 2.80.2
Run-time dependency gio-2.0 found: YES 2.80.2
Run-time dependency json-glib-1.0 found: YES 1.8.0
Run-time dependency rest-1.0 found: YES 0.9.1
Run-time dependency libsoup-3.0 found: YES 3.4.4
Run-time dependency goa-1.0 found: YES 3.50.1
Run-time dependency libuhttpmock-1.0 found: YES 0.10.0
Configuring config.h using configuration
Configuring msg-version.h using configuration
Compiler for C supports link arguments 
-Wl,--version-script,/<>/src/libmsgraph.map: NO
Run-time dependency gobject-introspection-1.0 found: YES 1.80.1
Dependency gobject-introspection-1.0 found: YES 1.80.1 (cached)
Program /usr/bin/x86_64-linux-gnu-g-ir-scanner found: YES 
(/usr/bin/x86_64-linux-gnu-g-ir-scanner)
Dependency gobject-introspection-1.0 found: YES 1.80.1 (cached)
Program /usr/bin/x86_64-linux-gnu-g-ir-compiler found: YES 
(/usr/bin/x86_64-linux-gnu-g-ir-compiler)
Configuring msg.toml using configuration
Program gi-docgen found: YES (/usr/bin/gi-docgen)
Build targets in project: 9

msgraph 0.2.1

  User defined options
buildtype : plain
libdir: lib/x86_64-linux-gnu
localstatedir : /var
prefix: /usr
sysconfdir: /etc
wrap_mode : nodownload
python.bytecompile: -1

Found ninja-1.12.1 at /usr/bin/ninja
   dh_auto_build
cd obj-x86_64-linux-gnu && LC_ALL=C.UTF-8 ninja -j2 -v
[1/43] cc -Isrc/libmsgraph-0.so.0.2.1.p -Isrc -I../src -I. -I.. -I/usr/include/glib-2.0 
-I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount 
-I/usr/include/blkid -I/usr/include/json-glib-1.0 -I/usr/include/rest-1.0 -I/usr/include/libsoup-3.0 
-I/usr/include/libxml2 -I/usr/include/goa-1.0 -I/usr/lib/x86_64-linux-gnu/goa-1.0/include 
-I/<>/obj-x86_64-linux-gnu -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 
-Wall -Winvalid-pch -Wextra -std=gnu11 -DMSG_COMPILATION -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection 
-Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -pthread -MD -MQ 
src/libmsgraph-0.so.0.2.1.p/contact_msg-contact.c.o -MF 
src/libmsgraph-0.so.0.2.1.p/contact_msg-contact.c.o.d -o 
src/libmsgraph-0.so.0.2.1.p/contact_msg-contact.c.o -c ../src/contact/msg-contact.c
[2/43] cc -Isrc/libmsgraph-0.so.0.2.1.p -Isrc -I../src -I. -I.. -I/usr/include/glib-2.0 
-I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount 
-I/usr/include/blkid -I/usr/include/json-glib-1.0 -I/usr/include/rest-1.0 -I/usr/include/libsoup-3.0 
-I/usr/include/libxml2 -I/usr/include/goa-1.0 -I/usr/lib/x86_64-linux-gnu/goa-1.0/include 
-I/<>/obj-x86_64-linux-gnu -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 
-Wall -Winvalid-pch -Wextra -std=gnu11 -DMSG_COMPILATION -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection 
-Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -pthread -MD -MQ 
src/libmsgraph-0.so.0.2.1.p/contact_msg-contact-service.c.o -MF 
src/libmsgraph-0.so.0.2.1.p/contact_msg-contact-service.c.o.d -o 
src/libmsgraph-0.so.0.2.1.p/contact_msg-contact-service.c.o -c ../src/contact/msg-contact-service.c
[3/43] cc -Isrc/libmsgraph-0.so.0.2.1.p -Isrc -I../src -I. -I.. -I/usr/include/glib-2.0 
-I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount 
-I/usr/include/blkid -I/usr/include/json-glib-1.0 -I/usr/include/rest-1.0 -I/usr/include/libsoup-3.0 
-I/usr/include/libxml2 -I/usr/include/goa-1.0 -I/usr/lib/x86_64-linux-gnu/goa-1.0/include 
-I/<>/obj-x86_64-linux-gnu -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 
-Wall -Winvalid-pch -Wextra -std=gnu11 -DMSG_COMPILATION -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection 
-Wformat -Werror=format-security -fcf-protection -Wdate-time 

Bug#1071329: meson-python: FTBFS: FileNotFoundError: [Errno 2] No such file or directory: '/<>/.pybuild/cpython3_3.11_mesonpy/build/docs/examples/spam'

2024-05-17 Thread Santiago Vila

Package: src:meson-python
Version: 0.15.0-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --with sphinxdoc --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
   dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" 
module
I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel 
--outdir /<>/.pybuild/cpython3_3.12_mesonpy --config-setting 
compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting 
setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting 
setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/x86_64-linux-gnu
* Building wheel...
+ meson setup /<> /<>/.mesonpy-yf0sm3kx -Dbuildtype=release 
-Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var 
--libdir=lib/x86_64-linux-gnu 
--native-file=/<>/.mesonpy-yf0sm3kx/meson-python-native-file.ini
The Meson build system
Version: 1.4.0
Source dir: /<>
Build dir: /<>/.mesonpy-yf0sm3kx
Build type: native build
Project name: meson-python
Project version: 0.15.0
Host machine cpu family: x86_64
Host machine cpu: x86_64
Program python found: YES (/usr/bin/python3.12)
Build targets in project: 0

meson-python 0.15.0

  User defined options
Native files : 
/<>/.mesonpy-yf0sm3kx/meson-python-native-file.ini
buildtype: release
libdir   : lib/x86_64-linux-gnu
localstatedir: /var
prefix   : /usr
sysconfdir   : /etc
wrap_mode: nodownload
b_ndebug : if-release
b_vscrt  : md

Found ninja-1.12.1 at /usr/bin/ninja
+ /usr/bin/ninja --verbose
ninja: no work to do.
[1/7] /<>/mesonpy/__init__.py
[2/7] /<>/mesonpy/_compat.py
[3/7] /<>/mesonpy/_editable.py
[4/7] /<>/mesonpy/_rpath.py
[5/7] /<>/mesonpy/_tags.py
[6/7] /<>/mesonpy/_util.py
[7/7] /<>/mesonpy/_wheelfile.py
Successfully built meson_python-0.15.0-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with 
"installer" module
I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" 
module
I: pybuild base:311: python3.11 -m build --skip-dependency-check --no-isolation --wheel 
--outdir /<>/.pybuild/cpython3_3.11_mesonpy --config-setting 
compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting 
setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting 
setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/x86_64-linux-gnu
* Building wheel...
+ meson setup /<> /<>/.mesonpy-_weco7n6 -Dbuildtype=release 
-Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var 
--libdir=lib/x86_64-linux-gnu 
--native-file=/<>/.mesonpy-_weco7n6/meson-python-native-file.ini
The Meson build system
Version: 1.4.0
Source dir: /<>
Build dir: /<>/.mesonpy-_weco7n6
Build type: native build
Project name: meson-python
Project version: 0.15.0
Host machine cpu family: x86_64
Host machine cpu: x86_64
Program python found: YES (/usr/bin/python3.11)
Build targets in project: 0

meson-python 0.15.0

  User defined options
Native files : 
/<>/.mesonpy-_weco7n6/meson-python-native-file.ini
buildtype: release
libdir   : lib/x86_64-linux-gnu
localstatedir: /var
prefix   : /usr
sysconfdir   : /etc
wrap_mode: nodownload
b_ndebug : if-release
b_vscrt  : md

Found ninja-1.12.1 at /usr/bin/ninja
+ /usr/bin/ninja --verbose
ninja: no work to do.
[1/7] /<>/mesonpy/__init__.py
[2/7] /<>/mesonpy/_compat.py
[3/7] /<>/mesonpy/_editable.py
[4/7] /<>/mesonpy/_rpath.py
[5/7] /<>/mesonpy/_tags.py
[6/7] /<>/mesonpy/_util.py
[7/7] /<>/mesonpy/_wheelfile.py
Successfully built meson_python-0.15.0-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.11 with 
"installer" module
   debian/rules execute_after_dh_auto_build
make[1]: Entering directory '/<>'
PYTHONPATH=. http_proxy='127.0.0.1:9' python3 -m sphinx -N -bhtml docs/ 
build/html
Running Sphinx v7.2.6
making output directory... done
loading intersphinx inventory from https://docs.python.org/3/objects.inv...
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 30 source files that are out of date
updating environment: [new config] 30 added, 0 changed, 0 removed
reading sources... [  3%] about
reading sources... [  7%] changelog
reading sources... [ 10%] contributing/commit-format
reading sources... [ 13%] contributing/documentation
reading sources... [ 17%] contributing/getting-started

Bug#1071328: lomiri-indicator-network: FTBFS: unit-tests failed

2024-05-17 Thread Santiago Vila

Package: src:lomiri-indicator-network
Version: 1.0.2-4
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- -DENABLE_TESTS=ON \
 
	cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DENABLE_TESTS=ON ..

-- The C compiler identification is GNU 13.2.0
-- The CXX compiler identification is GNU 13.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped

[... snipped ...]

1: 1715965979.445 GetAll /org/freedesktop/NetworkManager 
org.freedesktop.NetworkManager
1: 1715965979.445 Get /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.Connection.Active.Id
1: 1715965979.445 GetAll /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.Connection.Active
1: 1715965979.445 Get /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.Connection.Active.Type
1: 1715965979.445 GetAll /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.Connection.Active
1: 1715965979.446 Get /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.VPN.Connection.VpnState
1: 1715965979.446 GetAll /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.VPN.Connection
1: 1715965979.446 Get /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.Connection.Active.State
1: 1715965979.446 GetAll /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.Connection.Active
1: 1715965979.446 Get /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.Connection.Active.Connection
1: 1715965979.446 GetAll /org/freedesktop/NetworkManager/ActiveConnection/0 
org.freedesktop.NetworkManager.Connection.Active
1: [   OK ] TestConnectivityApiVpn.UpdatesVpnState (691 ms)
1: [ RUN  ] TestConnectivityApiVpn.ReadsOpenvpnProperties
1: Debug: /<>/tests/data/networkmanager.py ((null):0, (null))
1: 1715965979.896 AddModem "ril_0" {"Powered": False}
1: 1715965979.898 GetAll /ril_0 org.ofono.Modem
1: 1715965979.898 emit / org.ofono.Manager.ModemAdded "/ril_0" {"Online": True, "Powered": True, "Lockdown": False, "Emergency": False, "Manufacturer": "Fakesys", "Model": "Mock Modem", "Revision": "0815.42", 
"Serial": "12345678-1234-1234-1234-", "Type": "hardware", "Interfaces": ["org.ofono.CallVolume", "org.ofono.VoiceCallManager", "org.ofono.NetworkRegistration", "org.ofono.SimManager", 
"org.ofono.ConnectionManager"], "Features": ["gprs", "net"]}
1: 1715965979.898 SetProperty "Bearer" "none"
1: 1715965979.899 Set /ril_0 org.ofono.ConnectionManager.Bearer "none"
1: 1715965979.899 emit /ril_0 org.freedesktop.DBus.Properties.PropertiesChanged 
"org.ofono.ConnectionManager" {"Bearer": "none"} []
1: 1715965979.899 emit /ril_0 org.ofono.ConnectionManager.PropertyChanged "Bearer" 
"none"
1: 1715965979.899 SetProperty "Powered" False
1: 1715965979.899 Set /ril_0 org.ofono.ConnectionManager.Powered False
1: 1715965979.899 emit /ril_0 org.freedesktop.DBus.Properties.PropertiesChanged 
"org.ofono.ConnectionManager" {"Powered": False} []
1: 1715965979.899 emit /ril_0 org.ofono.ConnectionManager.PropertyChanged 
"Powered" False
1: 1715965979.900 SetProperty "Attached" False
1: 1715965979.900 Set /ril_0 org.ofono.ConnectionManager.Attached False
1: 1715965979.900 emit /ril_0 org.freedesktop.DBus.Properties.PropertiesChanged 
"org.ofono.ConnectionManager" {"Attached": False} []
1: 1715965979.900 emit /ril_0 org.ofono.ConnectionManager.PropertyChanged 
"Attached" False
1: 1715965979.901 AddConnection {"connection": {"id": "apple", "timestamp": 1441979296, "type": "vpn", "uuid": "b81a1cf4-37de-4497-925a-9d4e0e22ba76"}, "ipv4": {"addresses": [], "dns": [], "method": "auto", "never-default": True, "routes": []}, "ipv6": {"addresses": [], "dns": [], "ip6-privacy": 0, "method": "auto", 
"never-default": True, "routes": []}, "vpn": {"data": {"ca": "/my/ca.crt", "cert": "/my/cert.crt", "cert-pass-flags": "1", "connection-type": "password-tls", "key": "/my/key.key", "password-flags": "1", "remote": "remotey"}, "secrets": {"cert-pass": "certificate password", 

Bug#1071326: libnet-interface-perl: FTBFS: failing tests

2024-05-17 Thread Santiago Vila

Package: src:libnet-interface-perl
Version: 1.016-2
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build --buildsystem=perl_makemaker
   dh_update_autotools_config -O--buildsystem=perl_makemaker
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
   dh_autoreconf -O--buildsystem=perl_makemaker
configure.ac:72: warning: The macro `AC_CONFIG_HEADER' is obsolete.
configure.ac:72: You should run autoupdate.
./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from...
configure.ac:72: the top level
configure.ac:217: warning: The macro `AC_HEADER_STDC' is obsolete.
configure.ac:217: You should run autoupdate.
./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from...
configure.ac:217: the top level

[... snipped ...]

ok 40
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ok 155
ok 156
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ok 158
ok 159
ok 160
ok 161
ok 162
ok 163
ok 164
ok 165
ok 166
ok 167
ok
*** buffer overflow detected ***: terminated
t/simplesets.t 
1..2
ok 1 - use Net::Interface;
Failed 1/2 subtests
t/strlcpy.t ...
1..21
ok 1 - use Net::Interface;
ok 2 - strlcpy -1, got: 0
ok 3 - copied 0 bytes, exp: [undef]
ok 4 - strlcpy 0, got: 0
ok 5 - copied 0 bytes, exp: [undef]
ok 6 - strlcpy 1, got: 1
ok 7 - copied 1 bytes, exp: [\0]
ok 8 - strlcpy 2, got: 2
ok 9 - copied 2 bytes, exp: a\0
ok 10 - strlcpy 3, got: 3
ok 11 - copied 3 bytes, exp: ab\0
ok 12 - strlcpy 4, got: 4
ok 13 - copied 4 bytes, exp: abc\0
ok 14 - strlcpy 5, got: 5
ok 15 - copied 5 bytes, exp: abcd\0
ok 16 - strlcpy 6, got: 6
ok 17 - copied 6 bytes, exp: abcde\0
ok 18 - strlcpy 7, got: 7
ok 19 - copied 7 bytes, exp: abcdef\0
ok 20 - strlcpy 8, got: 7
ok 21 - copied 7 bytes, exp: abcdef\0
ok
t/symbols.t ...
ok 1 - use Net::Interface;
ok 2 - require Net::Interface::NetSymbols;
ok 3 - PF_UNSPEC = 0 found, unspec
ok 4 - PF_INET = 2 found, inet
ok 5 - AF_UNSPEC = 0 found, unspec
ok 6 - AF_INET = 2 found, inet
ok 7 - expected that _NI_AF_TEST is not implemented on this architecture
ok 8 - IFHWADDRLEN = 6 found, 6
ok 9 - IF_NAMESIZE = 16 found, 16
ok 10 - IFNAMSIZ = 16 found, 16
ok 11 - netsymbols max value +1 = 2147483647
ok 12 - found PF_UNSPEC => 0 unspec
ok 13 - found PF_LOCAL  => 1 file
ok 14 - found PF_INET   => 2 inet
ok 15 - found PF_AX25   => 3 ax25
ok 16 - found PF_IPX=> 4 ipx
ok 17 - found PF_APPLETALK  => 5 appletalk
ok 18 - found PF_X25=> 9 x25
ok 19 - found PF_INET6  => 10 inet6
ok 20 - found PF_ROSE   => 11 rose
ok 21 - found PF_DECnet => 12 decnet
ok 22 - found PF_PACKET => 17 packet
ok 23 - found PF_ASH=> 18 ash
ok 24 - found PF_ECONET => 19 econet
ok 25 - found PF_MAX=> 46 max
ok 26 - IFF_UP  => 0x1 = up
ok 27 - AF_INET => 0x2 = inet
ok 28 - RFC2373_GLOBAL  => 0xe = global-scope
ok 29 - RFC2373_ORGLOCAL=> 0x8 = org-local
ok 30 - RFC2373_SITELOCAL   => 0x5 = site-local
ok 31 - RFC2373_LINKLOCAL   => 0x2 = link-local
ok 32 - RFC2373_NODELOCAL   => 0x1 = loopback
ok 33 - IPV6_ADDR_ANY   => 0x0 = addr-any
ok 34 - IPV6_ADDR_UNICAST   => 0x1 = unicast
ok 35 - IPV6_ADDR_MULTICAST => 0x2 = multicast
ok 36 - IPV6_ADDR_ANYCAST   => 0x4 = anycast
ok 37 - IPV6_ADDR_LOOPBACK  => 0x10 = loopback
ok 38 - IPV6_ADDR_LINKLOCAL => 0x20 = link-local
ok 39 - IPV6_ADDR_SITELOCAL => 0x40 = site-local
ok 40 - IPV6_ADDR_COMPATv4  => 0x80 = compat-v4
ok 41 - IPV6_ADDR_SCOPE_MASK=> 0xf0 = scope-mask
ok 42 - IPV6_ADDR_MAPPED=> 0x1000 = mapped
ok 43 - IPV6_ADDR_RESERVED  => 0x2000 = reserved
ok 44 - IPV6_ADDR_ULUA  => 0x4000 = uniq-lcl-unicast
ok 45 - IPV6_ADDR_6TO4  => 0x1 = 6to4
ok 46 - IPV6_ADDR_6BONE => 0x2 = 6bone
ok 47 - IPV6_ADDR_AGU   => 0x4 = global-unicast
ok 48 - IPV6_ADDR_UNSPECIFIED   => 0x8 = unspecified
ok 49 - IPV6_ADDR_SOLICITED_NODE=> 0x10 = solicited-node
ok 50 - IPV6_ADDR_ISATAP=> 0x20 = ISATAP
ok 51 - IPV6_ADDR_PRODUCTIVE=> 0x40 = productive
ok 52 - IPV6_ADDR_6TO4_MICROSOFT=> 0x80 = 6to4-ms
ok 53 - 

Bug#1071325: libmodbus: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file

2024-05-17 Thread Santiago Vila

Package: src:libmodbus
Version: 3.1.10-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --with autoreconf --exclude=.la
   dh_update_autotools_config -O--exclude=.la
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
   dh_autoreconf -O--exclude=.la
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'.
libtoolize: copying file 'build-aux/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:33: installing 'build-aux/compile'
configure.ac:32: installing 'build-aux/missing'
src/Makefile.am: installing 'build-aux/depcomp'
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- --disable-silent-rules
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking --disable-silent-rules
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking how to create a pax tar archive... gnutar
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for wchar.h... yes
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking whether _XOPEN_SOURCE should be defined... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking whether make supports nested variables... (cached) yes
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu 
format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... 
func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for file... file
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if 

Bug#1071324: libhtp: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file

2024-05-17 Thread Santiago Vila

Package: src:libhtp
Version: 1:0.5.48-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh  binary --with autoreconf
   dh_update_autotools_config
   dh_autoreconf
find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o 
-path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a  -type f -exec md5sum {} + -o 
-type l -printf "symlink  %p
" > debian/autoreconf.before
grep -q ^XDT_ configure.ac
autoreconf -f -i
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:156: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:156: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from...
m4/iconv.m4:20: AM_ICONV_LINK is expanded from...
m4/iconv.m4:188: AM_ICONV is expanded from...
configure.ac:156: the top level
configure.ac:156: warning: The macro `AC_TRY_RUN' is obsolete.
configure.ac:156: You should run autoupdate.
./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from...
m4/iconv.m4:20: AM_ICONV_LINK is expanded from...
m4/iconv.m4:188: AM_ICONV is expanded from...
configure.ac:156: the top level
configure.ac:156: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:156: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
m4/iconv.m4:188: AM_ICONV is expanded from...
configure.ac:156: the top level
configure.ac:86: installing './compile'
configure.ac:89: installing './config.guess'
configure.ac:89: installing './config.sub'
configure.ac:7: installing './install-sh'
configure.ac:7: installing './missing'
Makefile.am: installing './INSTALL'
htp/Makefile.am: installing './depcomp'
parallel-tests: installing './test-driver'
find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o 
-path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a  -type f -exec md5sum {} + -o 
-type l -printf "symlink  %p
" > debian/autoreconf.after
   dh_auto_configure
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for g++... g++
checking whether the compiler supports GNU C++... yes
checking whether g++ accepts -g... yes
checking for g++ option to enable C++11 features... none needed
checking dependency style of g++... none
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is 

Bug#1071321: libdumbnet: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file

2024-05-17 Thread Santiago Vila

Package: src:libdumbnet
Version: 1.18.0-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
cp -an --reflink=auto config/config.guess 
debian/.debhelper/bucket/files/af8a1922c9b3c240bf2119d4ec0965a0b5ec36b1016017ba66db44b3b53e9cea.tmp
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
mv 
debian/.debhelper/bucket/files/af8a1922c9b3c240bf2119d4ec0965a0b5ec36b1016017ba66db44b3b53e9cea.tmp
 
debian/.debhelper/bucket/files/af8a1922c9b3c240bf2119d4ec0965a0b5ec36b1016017ba66db44b3b53e9cea
cp -f /usr/share/misc/config.guess ./config/config.guess
cp -an --reflink=auto config/config.sub 
debian/.debhelper/bucket/files/d611751fba98e807c9684d253bb02aa73d6825fe0e0b9ae3cbf258a59171c9b0.tmp
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
mv 
debian/.debhelper/bucket/files/d611751fba98e807c9684d253bb02aa73d6825fe0e0b9ae3cbf258a59171c9b0.tmp
 
debian/.debhelper/bucket/files/d611751fba98e807c9684d253bb02aa73d6825fe0e0b9ae3cbf258a59171c9b0
cp -f /usr/share/misc/config.sub ./config/config.sub
   debian/rules override_dh_autoreconf
make[1]: Entering directory '/<>'
dh_autoreconf autoreconf -- -f -i -Iconfig

[... snipped ...]

   37 | fail_unless(strcmp(tmp, "doofus") == 0, "read3 failed");
  | ^~
check_blob.c: In function ‘test_blob_insertdelete_fn’:
check_blob.c:48:52: warning: too many arguments for format [-Wformat-extra-args]
   48 | fail_unless(blob_insert(b, "foo", 3) == 3, "insert1 failed");
  |^~~~
check_blob.c:50:52: warning: too many arguments for format [-Wformat-extra-args]
   50 | fail_unless(blob_insert(b, "bar", 3) == 3, "insert2 failed");
  |^~~~
check_blob.c:54:48: warning: too many arguments for format [-Wformat-extra-args]
   54 | fail_unless(strcmp(tmp,"barfoo") == 0, "read failed");
  |^
check_blob.c:56:51: warning: too many arguments for format [-Wformat-extra-args]
   56 | fail_unless(blob_delete(b, NULL, 3) == 3, "delete failed");
  |   ^~~
check_blob.c:60:45: warning: too many arguments for format [-Wformat-extra-args]
   60 | fail_unless(strcmp(tmp,"foo") == 0, "read failed");
  | ^
check_blob.c:62:50: warning: too many arguments for format [-Wformat-extra-args]
   62 | fail_unless(blob_delete(b, NULL, 4) < 0, "deleted more than 
size");
  |  
^~~~
check_blob.c:65:17: warning: pointer targets in assignment from ‘char *’ to 
‘u_char *’ {aka ‘unsigned char *’} differ in signedness [-Wpointer-sign]
   65 | bf.base = "foobar";
  | ^
check_blob.c:69:56: warning: too many arguments for format [-Wformat-extra-args]
   69 | fail_unless(blob_insert(, "foobar", 6) < 0, "inserted into 
fixed");
  |
^
check_blob.c:70:52: warning: too many arguments for format [-Wformat-extra-args]
   70 | fail_unless(blob_delete(, NULL, 3) < 0, "deleted from 
fixed");
  |^~~~
check_blob.c: In function ‘test_blob_packunpack_fn’:
check_blob.c:98:13: warning: too many arguments for format [-Wformat-extra-args]
   98 | "pack failed");
  | ^
check_blob.c:106:13: warning: too many arguments for format 
[-Wformat-extra-args]
  106 | "unpack failed");
  | ^~~
check_blob.c:114:22: warning: too many arguments for format 
[-Wformat-extra-args]
  114 | fail("unpacked weird crap");
  |  ^
check_blob.c: In function ‘test_blob_seek_fn’:
check_blob.c:127:43: warning: too many arguments for format 
[-Wformat-extra-args]
  127 | fail_unless(blob_skip(b, 3) == 3, "skip failed");
  |   ^
check_blob.c:128:43: warning: too many arguments for format 
[-Wformat-extra-args]
  128 | fail_unless(blob_skip(b, 3) == 6, "skip to end failed");
  |   ^~~~
check_blob.c:129:42: warning: too many arguments for format 
[-Wformat-extra-args]
  129 | fail_unless(blob_skip(b, 1) < 0, "skipped past end");
  | 

Bug#1071322: libesmtp: FTBFS: ../smtp-api.c:1183:7: error: implicit declaration of function ‘strlcpy’

2024-05-17 Thread Santiago Vila

Package: src:libesmtp
Version: 1.1.0-3.1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure
cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 
meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc 
--localstatedir=/var --libdir=lib/x86_64-linux-gnu -Dpython.bytecompile=-1
The Meson build system
Version: 1.4.0
Source dir: /<>
Build dir: /<>/obj-x86_64-linux-gnu
Build type: native build
Project name: libESMTP
Project version: 1.1.0
C compiler for the host machine: cc (gcc 13.2.0 "cc (Debian 13.2.0-25) 13.2.0")
C linker for the host machine: cc ld.bfd 2.42
Host machine cpu family: x86_64
Host machine cpu: x86_64
Compiler for C supports arguments -D_POSIX_C_SOURCE=200809L: YES
Library dl found: YES
Found pkg-config: YES (/usr/bin/pkg-config) 1.8.1
Run-time dependency openssl found: YES 3.2.2-dev
Run-time dependency threads found: YES
Library lwres skipped: feature lwres disabled
Checking for function "strlcpy" : YES
Checking for function "strdup" : YES
Checking for function "strncasecmp" : YES
Checking for function "strcasecmp" : YES
Header "string.h" has symbol "memrchr" : NO
Checking for size of "unsigned int" : 4
Checking for size of "unsigned long" : 8
Checking for size of "unsigned short" : 2
Configuring config.h using configuration
Configuring libesmtp.spec using configuration
Build targets in project: 6

libESMTP 1.1.0

current:revision:age: 8:0:2
so version  : 6.2.0
prefix  : /usr
libdir  : lib/x86_64-linux-gnu
threads : true
lwres   : false
AUTH modules: /usr/lib/x86_64-linux-gnu/esmtp-plugins-6.2.0
Legacy file layout  : false
STARTTLS: true
CHUNKING: true
ETRN: true
XUSR: true

  User defined options
buildtype   : plain
libdir  : lib/x86_64-linux-gnu
localstatedir   : /var
prefix  : /usr
sysconfdir  : /etc
wrap_mode   : nodownload
python.bytecompile  : -1

Found ninja-1.12.1 at /usr/bin/ninja
   dh_auto_build
cd obj-x86_64-linux-gnu && LC_ALL=C.UTF-8 ninja -j2 -v
[1/34] cc -Ilibesmtp.so.6.2.0.p -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 
-Wall -Winvalid-pch -std=c11 -D_POSIX_C_SOURCE=200809L -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -pthread -MD -MQ 
libesmtp.so.6.2.0.p/base64.c.o -MF libesmtp.so.6.2.0.p/base64.c.o.d -o 
libesmtp.so.6.2.0.p/base64.c.o -c ../base64.c
[2/34] cc -Ilibesmtp.so.6.2.0.p -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 
-Wall -Winvalid-pch -std=c11 -D_POSIX_C_SOURCE=200809L -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -pthread -MD -MQ 
libesmtp.so.6.2.0.p/auth-client.c.o -MF libesmtp.so.6.2.0.p/auth-client.c.o.d -o 
libesmtp.so.6.2.0.p/auth-client.c.o -c ../auth-client.c
[3/34] cc -Ilibesmtp.so.6.2.0.p -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 
-Wall -Winvalid-pch -std=c11 -D_POSIX_C_SOURCE=200809L -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -pthread -MD -MQ 
libesmtp.so.6.2.0.p/concatenate.c.o -MF libesmtp.so.6.2.0.p/concatenate.c.o.d -o 
libesmtp.so.6.2.0.p/concatenate.c.o -c ../concatenate.c
[4/34] cc -Ilibesmtp.so.6.2.0.p -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 
-Wall -Winvalid-pch -std=c11 -D_POSIX_C_SOURCE=200809L -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -pthread -MD -MQ 
libesmtp.so.6.2.0.p/errors.c.o -MF libesmtp.so.6.2.0.p/errors.c.o.d -o 
libesmtp.so.6.2.0.p/errors.c.o -c ../errors.c
[5/34] cc -Ilibesmtp.so.6.2.0.p -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 
-Wall -Winvalid-pch -std=c11 -D_POSIX_C_SOURCE=200809L -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -pthread -MD -MQ 
libesmtp.so.6.2.0.p/htable.c.o -MF libesmtp.so.6.2.0.p/htable.c.o.d -o 
libesmtp.so.6.2.0.p/htable.c.o -c ../htable.c
[6/34] cc 

Bug#1071319: libapache2-mod-auth-openidc: FTBFS: test/test fails

2024-05-17 Thread Santiago Vila

Package: src:libapache2-mod-auth-openidc
Version: 2.4.15.7-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build --with apache2
   dh_update_autotools_config
   dh_autoreconf
aclocal: warning: couldn't open directory 'm4': No such file or directory
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:12: installing './ar-lib'
configure.ac:10: installing './compile'
configure.ac:13: installing './config.guess'
configure.ac:13: installing './config.sub'
configure.ac:5: installing './install-sh'
configure.ac:5: installing './missing'
Makefile.am: installing './depcomp'
parallel-tests: installing './test-driver'
   dh_auto_configure
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for ar... ar
checking the archiver (ar) interface... ar
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu 
format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... 
func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for file... file
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared 
libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for shl_load... no
checking for shl_load in -ldld... no
checking for dlopen... yes

Bug#1071318: jack-capture: FTBFS: jack_capture.c:912:5: error: conflicting types for ‘asprintf’; have ‘int(char **, char *, ...)’

2024-05-17 Thread Santiago Vila

Package: src:jack-capture
Version: 0.9.73-4
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure
   dh_auto_build
make -j2
make[1]: Entering directory '/<>'
bash gen_setformat_c.sh >setformat.c

Checking dependencies:
which bash
/usr/bin/bash
which tr
/usr/bin/tr
which sed
/usr/bin/sed
which install
/usr/bin/install
which pkg-config
/usr/bin/pkg-config
which gcc
/usr/bin/gcc
which g++
/usr/bin/g++
gcc -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/opt/local/include 
-E testsndfile.c >/dev/null
All seems good

bash gen_das_config_h.sh >das_config.h

jack_capture was configured with the following options:
--
#define HAVE_OGG 1
#define HAVE_LAME 1
//COMPILEFLAGS -lmp3lame
#define HAVE_LIBLO 1
//COMPILEFLAGS  -llo
#define NEW_JACK_LATENCY_API 1
--

cat das_config.h |grep COMPILEFLAGS|sed s/\\/\\/COMPILEFLAGS//|tr '\n' ' ' 
>config_flags
gcc  -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 
-I/opt/local/include -O3 -DVERSION=\"0.9.73\" -Wall -Wextra -Wno-unused jack_capture.c 
vringbuffer.c upwaker.c osc.c -o jack_capture -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -latomic -ljack 
-lsndfile -lm -lpthread -lrt `cat config_flags`
jack_capture.c:912:5: error: conflicting types for ‘asprintf’; have ‘int(char 
**, char *, ...)’
  912 | int asprintf(char **buffer, char *fmt, ...) {
  | ^~~~
In file included from jack_capture.c:24:
/usr/include/stdio.h:401:12: note: previous declaration of ‘asprintf’ with type 
‘int(char ** restrict,  const char * restrict, ...)’
  401 | extern int asprintf (char **__restrict __ptr,
  |^~~~
make[1]: *** [Makefile:63: jack_capture] Error 1
make[1]: Leaving directory '/<>'
dh_auto_build: error: make -j2 returned exit code 2
make: *** [debian/rules:11: build] Error 25
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.



Bug#1071317: intel-mkl: FTBFS: error: can't create transaction lock on /var/lib/rpm/.rpm.lock (No such file or directory)

2024-05-17 Thread Santiago Vila

Package: src:intel-mkl
Version: 2020.4.304-4
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
../intel-mkl_2020.4.304.orig.tar.gz: OK
rpm --rebuilddb
error: can't create transaction lock on /var/lib/rpm/.rpm.lock (No such file or 
directory)
make[1]: *** [debian/rules:35: extract-rpms] Error 255
make[1]: Leaving directory '/<>'
make: *** [debian/rules:27: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.



Bug#1071316: infinipath-psm: FTBFS: ips_proto_dump.c:142:15: error: static declaration of ‘strlcat’ follows non-static declaration

2024-05-17 Thread Santiago Vila

Package: src:infinipath-psm
Version: 3.3+20.604758e7-6.3
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build --parallel
dh: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_update_autotools_config -O--parallel
   dh_auto_configure -O--parallel
dh_auto_configure: warning: Compatibility levels before 10 are deprecated 
(level 9 in use)
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<>'
sed -e 's/@DEB_HOST_MULTIARCH@/x86_64-linux-gnu/g'  \
-e 's/@PSM_LIB_VERSION@/1.16/g' \
-e 's/@PSM_LIB_MAJOR@/1/g'  \
debian/libpsm-infinipath1.postinst.in > 
debian/libpsm-infinipath1.postinst
sed -e 's/@DEB_HOST_MULTIARCH@/x86_64-linux-gnu/g'  \
-e 's/@PSM_LIB_VERSION@/1.16/g' \
-e 's/@PSM_LIB_MAJOR@/1/g'  \
debian/libpsm-infinipath1.prerm.in > debian/libpsm-infinipath1.prerm
sed -e 's/@DEB_HOST_MULTIARCH@/x86_64-linux-gnu/g'  \
-e 's/@PSM_LIB_VERSION@/1.16/g' \
-e 's/@PSM_LIB_MAJOR@/1/g'  \
debian/libpsm-infinipath1.postrm.in > debian/libpsm-infinipath1.postrm
/usr/bin/make INSTALL_PREFIX=/usr libdir=/usr/lib/x86_64-linux-gnu 
PSM_HAVE_SCIF=0 USE_PSM_UUID=0 arch=x86_64
make[2]: Entering directory '/<>'
/bin/sh: 1: [[: not found
/bin/sh: 1: [[: not found
for subdir in ptl_self ptl_ips ptl_am libuuid ipath; do \
/usr/bin/make -C $subdir ;\
done
make[3]: Entering directory '/<>/ptl_self'
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE 
-funwind-tables   -O3 -g3   -DNVALGRIND   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE -funwind-tables   -O3 -g3  -DPSM_USE_SYS_UUID  
-DNVALGRIND -I. -I/<>/include -I/<>/mpspawn 
-I/<>/include/linux-x86_64  -I/<> -c ptl.c -o ptl.o
make[3]: Leaving directory '/<>/ptl_self'
make[3]: Entering directory '/<>/ptl_ips'
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE 
-funwind-tables   -O3 -g3   -DNVALGRIND   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE -funwind-tables   -O3 -g3  -DPSM_USE_SYS_UUID  
-DNVALGRIND -I. -I/<>/include -I/<>/mpspawn 
-I/<>/include/linux-x86_64  -I/<> -I/ptl_ips -c ptl.c -o ptl.o
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE 
-funwind-tables   -O3 -g3   -DNVALGRIND   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE -funwind-tables   -O3 -g3  -DPSM_USE_SYS_UUID  
-DNVALGRIND -I. -I/<>/include -I/<>/mpspawn 
-I/<>/include/linux-x86_64  -I/<> -I/ptl_ips -c ptl_rcvthread.c -o ptl_rcvthread.o
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE 
-funwind-tables   -O3 -g3   -DNVALGRIND   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE -funwind-tables   -O3 -g3  -DPSM_USE_SYS_UUID  
-DNVALGRIND -I. -I/<>/include -I/<>/mpspawn 
-I/<>/include/linux-x86_64  -I/<> -I/ptl_ips -c ips_proto.c -o ips_proto.o
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE 
-funwind-tables   -O3 -g3   -DNVALGRIND   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE -funwind-tables   -O3 -g3  -DPSM_USE_SYS_UUID  
-DNVALGRIND -I. -I/<>/include -I/<>/mpspawn 
-I/<>/include/linux-x86_64  -I/<> -I/ptl_ips -c ipserror.c -o ipserror.o
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE 
-funwind-tables   -O3 -g3   -DNVALGRIND   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE -funwind-tables   -O3 -g3  -DPSM_USE_SYS_UUID  
-DNVALGRIND -I. -I/<>/include -I/<>/mpspawn 
-I/<>/include/linux-x86_64  -I/<> -I/ptl_ips -c ips_recvq.c -o ips_recvq.o
cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE 
-funwind-tables   -O3 -g3   -DNVALGRIND   -Wall -Werror  -fpic -fPIC -D_GNU_SOURCE -funwind-tables   -O3 -g3  -DPSM_USE_SYS_UUID  
-DNVALGRIND -I. -I/<>/include -I/<>/mpspawn 

Bug#1071314: heartbeat: FTBFS: dh_install: warning: Cannot find (any matches for) "/heartbeat.service"

2024-05-17 Thread Santiago Vila

Package: src:heartbeat
Version: 1:3.0.6-14.1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh_testdir
# Only bootstrap as neccessary
if test -e ./configure -a ! -x ./configure; then\
chmod u+x ./configure;  \
fi
if test -e ./py-compile -a ! -x ./py-compile; then  \
chmod u+x ./py-compile; \
fi
test ! -x ./configure || /bin/bash ./configure PING=/bin/ping 
IFCONFIG=/sbin/ifconfig IP2UTIL=/sbin/ip PYTHON=/usr/bin/python3 --prefix=/usr 
--sysconfdir=/etc --localstatedir=/var --libexecdir=/usr/libexec 
--mandir=/usr/share/man --disable-crm --with-group-name=haclient 
--with-ccmuser-name=hacluster --enable-libc-malloc --disable-fatal-warnings;
test -x ./configure || /bin/bash ./bootstrap PING=/bin/ping 
IFCONFIG=/sbin/ifconfig IP2UTIL=/sbin/ip PYTHON=/usr/bin/python3 --prefix=/usr 
--sysconfdir=/etc --localstatedir=/var --libexecdir=/usr/libexec 
--mandir=/usr/share/man --disable-crm --with-group-name=haclient 
--with-ccmuser-name=hacluster --enable-libc-malloc --disable-fatal-warnings
Autoconf package autoconf found.
Automake package automake found.
Libtool package libtoolize found.

[... snipped ...]

make[3]: Leaving directory '/<>/lib/apphb'
Making install in plugins
make[3]: Entering directory '/<>/lib/plugins'
Making install in HBauth
make[4]: Entering directory '/<>/lib/plugins/HBauth'
make[5]: Entering directory '/<>/lib/plugins/HBauth'
make[5]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p 
'/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth'
 /bin/bash ../../../libtool --tag=CC--mode=install /usr/bin/install -c   md5.la crc.la 
sha1.la '/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth'
libtool: install: /usr/bin/install -c .libs/md5.so 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/md5.so
libtool: install: /usr/bin/install -c .libs/md5.lai 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/md5.la
libtool: install: /usr/bin/install -c .libs/crc.so 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/crc.so
libtool: install: /usr/bin/install -c .libs/crc.lai 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/crc.la
libtool: install: /usr/bin/install -c .libs/sha1.so 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/sha1.so
libtool: install: /usr/bin/install -c .libs/sha1.lai 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/sha1.la
libtool: install: /usr/bin/install -c .libs/md5.a 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/md5.a
libtool: install: chmod 644 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/md5.a
libtool: install: ranlib 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/md5.a
libtool: install: /usr/bin/install -c .libs/crc.a 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/crc.a
libtool: install: chmod 644 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/crc.a
libtool: install: ranlib 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/crc.a
libtool: install: /usr/bin/install -c .libs/sha1.a 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/sha1.a
libtool: install: chmod 644 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/sha1.a
libtool: install: ranlib 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBauth/sha1.a
libtool: warning: remember to run 'libtool --finish 
/usr/lib/heartbeat/plugins/HBauth'
make[5]: Leaving directory '/<>/lib/plugins/HBauth'
make[4]: Leaving directory '/<>/lib/plugins/HBauth'
Making install in HBcomm
make[4]: Entering directory '/<>/lib/plugins/HBcomm'
make[5]: Entering directory '/<>/lib/plugins/HBcomm'
make[6]: Entering directory '/<>/lib/plugins/HBcomm'
make[6]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p 
'/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm'
 /bin/bash ../../../libtool --tag=CC--mode=install /usr/bin/install -c   bcast.la 
mcast.la mcast6.la ucast.la ucast6.la serial.la ping.la ping6.la ping_group.la 
'/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm'
libtool: install: /usr/bin/install -c .libs/bcast.so 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm/bcast.so
libtool: install: /usr/bin/install -c .libs/bcast.lai 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm/bcast.la
libtool: install: /usr/bin/install -c .libs/mcast.so 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm/mcast.so
libtool: install: /usr/bin/install -c .libs/mcast.lai 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm/mcast.la
libtool: install: /usr/bin/install -c .libs/mcast6.so 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm/mcast6.so
libtool: install: /usr/bin/install -c .libs/mcast6.lai 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm/mcast6.la
libtool: install: /usr/bin/install -c .libs/ucast.so 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm/ucast.so
libtool: install: /usr/bin/install -c .libs/ucast.lai 
/<>/debian/tmp/usr/lib/heartbeat/plugins/HBcomm/ucast.la

Bug#1071310: gitsome: FTBFS: ModuleNotFoundError: No module named 'pytz'

2024-05-17 Thread Santiago Vila

Package: src:gitsome
Version: 0.8.0+ds-8
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --with python3 --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.11 setup.py config
/usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: 
setuptools.installer and fetch_build_eggs are deprecated.
!!



Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.



!!
  dist.fetch_build_eggs(dist.setup_requires)
WARNING: The wheel package is not available.

running config
   dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3 setup.py build
/usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: 
setuptools.installer and fetch_build_eggs are deprecated.
!!



Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.



!!
  dist.fetch_build_eggs(dist.setup_requires)
WARNING: The wheel package is not available.

running build
running build_py
creating /<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/test_completer.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/run_tests.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/test_web_viewer.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/test_config.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/compat.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/test_github.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/test_github_cli.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/mock_github_api.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/mock_pretty_date_time.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/__init__.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
copying tests/mock_feed_parser.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests
creating /<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/table.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/formatter.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/web_viewer.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/main.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/github.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/completer.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/completions.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/githubcli.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/utils.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/config.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/compat.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/completions_git.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/view_entry.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/main_cli.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/rss_feed.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
copying gitsome/__init__.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/gitsome
creating /<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/email.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/trends.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/license.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/markdown.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/user_feed.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/gitignores.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/issue.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/emoji.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/user.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying tests/data/thread.py -> 
/<>/.pybuild/cpython3_3.11_gitsome/build/tests/data
copying 

Bug#1071311: gpsd: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file

2024-05-17 Thread Santiago Vila

Package: src:gpsd
Version: 3.25-3
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
if [ ! -f SConscript.deb_revision ]; then \
cp SConscript SConscript.deb_revision ;\
sed -i '/^revision=/s/%(.*)/%("3.25-3",)/' SConscript ;\
fi
touch SConscript.deb_revision
set -e ; export LDFLAGS="-Wl,-z,relro -Wl,-z,now" ; export CFLAGS="-g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection" ; export CXXFLAGS="-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" ; export CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2"; 
python3 /usr/bin/scons shared=no prefix=/usr systemd=yes nostrip=yes dbus_export=yes docdir=/usr/share/doc/gpsd 
libdir=/usr/lib/x86_64-linux-gnu gpsd_user=gpsd gpsd_group=dialout qt_versioned=5 python_libdir=/usr/lib/python3/dist-packages manbuild=yes 
debug=no target_python=python3 -j2
scons: Reading SConscript files ...
scons version: 4.5.2
scons is running under Python version: 3.11.9.final.0
gpsd version: 3.25
This system is: linux
cc is gcc, version 13.2.0
Checking whether the C compiler works... yes

[... snipped ...]

cd gpsd-3.25; ./regress-driver -q -o -t test/daemon/venus634lp.log
Processing test/daemon/venus634lp.log
Regression test test/daemon/udp-test.log successful
cd gpsd-3.25; ./regress-driver -q -o -t test/daemon/zodiac.log
Processing test/daemon/zodiac.log
Regression test test/daemon/venus634lp.log successful
Regression test test/daemon/zodiac.log successful
scons: done building targets.
Ensure your PYTHONPATH includes /usr/lib/python3/dist-packages/
touch build-stamp
for source in debian/libgpsLIBGPSSONAME.install 
debian/libgpsLIBGPSSONAME.lintian-overrides debian/libgpsLIBGPSSONAME.symbols 
debian/libqgpsmmLIBGPSSONAME.install 
debian/libqgpsmmLIBGPSSONAME.lintian-overrides 
debian/libqgpsmmLIBGPSSONAME.symbols; do \
target=$(echo "$source" | sed 's,LIBGPSSONAME,30t64,g') ;\
sed 's,LIBGPSSONAME,30,g; s,LIBGPS_PKG_SUFFIX,30t64,g' "$source" > 
"$target" ;\
done
dh_testdir
dh_testroot
dh_prep
set -e ; export LDFLAGS="-Wl,-z,relro -Wl,-z,now" ; export CFLAGS="-g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection" ; export CXXFLAGS="-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" ; export CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2"; 
DESTDIR=`pwd`/debian/tmp python3 /usr/bin/scons install prefix=/usr systemd=yes nostrip=yes dbus_export=yes docdir=/usr/share/doc/gpsd 
libdir=/usr/lib/x86_64-linux-gnu gpsd_user=gpsd gpsd_group=dialout qt_versioned=5 python_libdir=/usr/lib/python3/dist-packages manbuild=yes 
debug=no target_python=python3
scons: Reading SConscript files ...
scons version: 4.5.2
scons is running under Python version: 3.11.9.final.0
gpsd version: 3.25
This system is: linux
cc is gcc, version 13.2.0
Checking whether the C compiler works... (cached) yes
Checking if compiler accepts -pthread... (cached) yes
Checking whether the C++ compiler works... (cached) yes
Checking for C header file curses.h... (cached) yes
Checking pkg-config for ncurses... (cached) yes
Checking pkg-config for tinfo... (cached) yes
Checking pkg-config for libusb-1.0... (cached) yes
Checking for C library librt... (cached) yes
Checking for C library libnsl... (cached) no
Checking for C library libsocket... (cached) no
Checking for C library libm... (cached) yes
Checking for C library libthr... (cached) no
Checking pkg-config for dbus-1... (cached) yes
Checking pkg-config for bluez... (cached) yes
Checking for C type in_port_t... (cached) yes
Checking whether SUN_LEN is declared... (cached) yes
Checking for C header file linux/can.h... (cached) yes
You have kernel CANbus available.
Checking if compiler is C11... (cached) yes
Checking whether __STDC_NO_ATOMICS__ is declared... (cached) no
Checking for C header file stdatomic.h... (cached) yes
Checking whether __ORDER_BIG_ENDIAN__ is declared... (cached) yes
Checking whether __ORDER_LITTLE_ENDIAN__ is declared... (cached) yes
Checking whether __BYTE_ORDER__ is declared... (cached) yes
Your compiler has built-in endianness support.
Checking for C header file arpa/inet.h... (cached) yes
Checking for C header file linux/serial.h... (cached) yes
Checking for C header file netdb.h... (cached) yes
Checking for C header file netinet/in.h... (cached) yes
Checking for C header file netinet/ip.h... (cached) yes
Checking for C header file sys/sysmacros.h... (cached) yes
Checking for C header file sys/socket.h... (cached) yes
Checking for C header file sys/un.h... (cached) 

Bug#1071313: guestfs-tools: FTBFS: guestfsd: error: minix: /dev/sda1: mkfs: failed to execute mkfs.minix: No such file or directory

2024-05-17 Thread Santiago Vila

Package: src:guestfs-tools
Version: 1.52.0-2
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
   dh_autoreconf
configure.ac: warning: AM_GNU_GETTEXT is used, but not AM_GNU_GETTEXT_VERSION 
or AM_GNU_GETTEXT_REQUIRE_VERSION
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'.
libtoolize: copying file 'build-aux/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'

[... snipped ...]



/dev/disk/by-diskseq:

total 0

lrwxrwxrwx 1 0 0 9 May 17 18:30 1 -> ../../sda

lrwxrwxrwx 1 0 0 9 May 17 18:30 2 -> ../../sdb



/dev/disk/by-id:

total 0

lrwxrwxrwx 1 0 0 9 May 17 18:30 scsi-0QEMU_QEMU_HARDDISK_appliance -> ../../sdb

lrwxrwxrwx 1 0 0 9 May 17 18:30 scsi-0QEMU_QEMU_HARDDISK_hd0 -> ../../sda



/dev/disk/by-path:

total 0

lrwxrwxrwx 1 0 0 9 May 17 18:30 pci-:00:02.0-scsi-0:0:0:0 -> ../../sda

lrwxrwxrwx 1 0 0 9 May 17 18:30 pci-:00:02.0-scsi-0:0:1:0 -> ../../sdb



/dev/disk/by-uuid:

total 0

lrwxrwxrwx 1 0 0 9 May 17 18:30 b6cf2551-a800-4675-b55b-ad7f7474d0ac -> 
../../sdb



/dev/input:

total 0

crw--- 1 0 0 13, 63 May 17 18:30 mice



/dev/mapper:

total 0

crw--- 1 0 0 10, 236 May 17 18:30 control



/dev/net:

total 0

crw-rw-rw- 1 0 0 10, 200 May 17 18:30 tun



/dev/pts:

total 0

c- 1 0 0 5, 2 May 17 18:30 ptmx



/dev/shm:

total 0



/dev/snd:

total 0

crw--- 1 0 0 116,  1 May 17 18:30 seq

crw--- 1 0 0 116, 33 May 17 18:30 timer



/dev/vfio:

total 0

crw-rw-rw- 1 0 0 10, 196 May 17 18:30 vfio



/dev/virtio-ports:

total 0

lrwxrwxrwx 1 0 0 11 May 17 18:30 org.libguestfs.channel.0 -> ../vport2p1

+ cat /proc/mounts

/dev/root / ext2 rw,noatime 0 0

/proc /proc proc rw,relatime 0 0

/sys /sys sysfs rw,relatime 0 0

/dev /dev devtmpfs rw,relatime,size=616296k,nr_inodes=154074,mode=755,inode64 0 0

/dev/pts /dev/pts devpts rw,relatime,mode=600,ptmxmode=000 0 0

shmfs /dev/shm tmpfs rw,relatime,inode64 0 0

tmpfs /run tmpfs rw,nosuid,relatime,size=249604k,mode=755,inode64 0 0

+ cat /proc/mdstat

cat: /proc/mdstat: No such file or directory

+ lvm config

+ lvm pvs

+ lvm vgs

+ lvm lvs

+ ip a

1: \x1b[36mlo: \x1b[0m mtu 65536 qdisc noqueue state 
UNKNOWN group default qlen 1000

link/loopback \x1b[33m00:00:00:00:00:00\x1b[0m brd 
\x1b[33m00:00:00:00:00:00\x1b[0m

inet \x1b[35m127.0.0.1\x1b[0m/8 brd \x1b[35m127.255.255.255 \x1b[0mscope 
host lo

   valid_lft forever preferred_lft forever

inet6 \x1b[34m::1\x1b[0m/128 scope host proto kernel_lo

   valid_lft forever preferred_lft forever

+ ip r

+ cat /etc/resolv.conf

cat: /etc/resolv.conf: No such file or directory

+ lsmod

Module  Size  Used by

dm_mod221184  0

sg 45056  0

virtio_snd 40960  0

snd_pcm   192512  1 virtio_snd

snd_timer  53248  1 snd_pcm

snd   155648  3 virtio_snd,snd_timer,snd_pcm

soundcore  16384  1 snd

libcrc32c  12288  0

crc8   12288  0

crc7   12288  0

crc_itu_t  12288  0

ext4 1130496  1

crc16  12288  1 ext4

mbcache16384  1 ext4

jbd2  196608  1 ext4

virtio_vdpa16384  0

vdpa   36864  1 virtio_vdpa

virtio_mmio16384  0

virtio_mem 49152  0

virtio_input   16384  0

virtio_dma_buf 12288  0

virtio_balloon 32768  0

virtio_scsi28672  1

sd_mod 86016  1

t10_pi 20480  1 sd_mod

crc64_rocksoft 16384  1 t10_pi

crc_t10dif 16384  1 t10_pi

virtio_pmem16384  0

nd_virtio  12288  1 virtio_pmem

nd_pmem24576  0

nd_btt 32768  1 nd_pmem

virtio_net 86016  0

net_failover   24576  1 virtio_net

failover   12288  1 net_failover

virtio_crypto  45056  0

crypto_engine  28672  1 virtio_crypto

virtio_console 40960  0

virtio_rng 12288  0

virtio_blk 32768  0

ata_piix   45056  0

libata471040  1 ata_piix

scsi_mod  331776  4 virtio_scsi,sd_mod,libata,sg

scsi_common16384  4 scsi_mod,sd_mod,libata,sg

nfit   81920  0

libnvdimm 245760  4 nd_btt,nd_pmem,nfit,virtio_pmem


Bug#1071309: gajim: FTBFS: test_get_first_grapheme fails

2024-05-17 Thread Santiago Vila

Package: src:gajim
Version: 1.8.4-3
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --with python3 --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
   dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" 
module
I: pybuild base:311: python3.11 -m build --skip-dependency-check --no-isolation --wheel 
--outdir /<>/.pybuild/cpython3_3.11
* Building wheel...
Compile /<>/po/ar.po >> 
/<>/gajim/data/locale/ar/LC_MESSAGES/gajim.mo
Compile /<>/po/be.po >> 
/<>/gajim/data/locale/be/LC_MESSAGES/gajim.mo
Compile /<>/po/b...@latin.po >> 
/<>/gajim/data/locale/be@latin/LC_MESSAGES/gajim.mo
Compile /<>/po/bg.po >> 
/<>/gajim/data/locale/bg/LC_MESSAGES/gajim.mo
Compile /<>/po/br.po >> 
/<>/gajim/data/locale/br/LC_MESSAGES/gajim.mo

[... snipped ...]

adding 
'gajim/data/icons/hicolor/16x16/devices/feather-hash-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-home-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-info-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-lock-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-log-in-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-log-out-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-mic-off-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-mic-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-more-horizontal-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-server-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-shield-off-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-shield-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-unlock-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-user-check-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-user-symbolic.symbolic.png'
adding 
'gajim/data/icons/hicolor/16x16/devices/feather-users-symbolic.symbolic.png'
adding 'gajim/data/icons/hicolor/16x16/devices/lucide-bot-symbolic.symbolic.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-away.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-chat.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-connecting.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-dnd.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-error.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-event.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-muc-active.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-muc-inactive.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-offline.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-online.png'
adding 'gajim/data/icons/hicolor/16x16/status/dcraven-xa.png'
adding 'gajim/data/icons/hicolor/16x16/status/gajim-event.png'
adding 'gajim/data/icons/hicolor/16x16/status/gajim-plugins.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-bytestreams.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-conference.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-disc.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-facebook.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-gadu-gadu.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-http-ws.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-icq.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-irc.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-jabber.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-jud.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-mail.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-mrim.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-msn.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-pubsub.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-rss.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-sip.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-sms.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-tv.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-twitter.png'
adding 'gajim/data/icons/hicolor/32x32/categories/gajim-agent-weather.png'
adding 'gajim/data/icons/hicolor/32x32/devices/LICENSE'
adding 

Bug#1071312: guake-indicator: FTBFS: guake-indicator-ayatana.c:36:15: error: implicit declaration of function ‘IS_APP_INDICATOR’

2024-05-17 Thread Santiago Vila

Package: src:guake-indicator
Version: 1.4.5-2
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --with autoreconf
   dh_update_autotools_config
   dh_autoreconf
aclocal: warning: couldn't open directory 'm4': No such file or directory
configure.ac:16: warning: The macro `AC_STDC_HEADERS' is obsolete.
configure.ac:16: You should run autoupdate.
./lib/autoconf/oldnames.m4:75: AC_STDC_HEADERS is expanded from...
configure.ac:16: the top level
configure.ac:16: warning: The macro `AC_HEADER_STDC' is obsolete.
configure.ac:16: You should run autoupdate.
./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from...
./lib/autoconf/oldnames.m4:75: AC_STDC_HEADERS is expanded from...
configure.ac:16: the top level
configure.ac:14: installing './compile'
configure.ac:3: installing './install-sh'
configure.ac:3: installing './missing'
src/Makefile.am: installing './depcomp'
   dh_auto_configure
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether make supports nested variables... (cached) yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for bzero... yes
checking for mkdir... yes
checking for strdup... yes
checking for strerror... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for glib-2.0 >= 2.50.0 gio-2.0 >= 2.50.0... yes
checking for gtk+-3.0 >= 3.22.0... yes
checking for ayatana-appindicator3-0.1 >= 0.0.13... yes
checking for json-c... yes
checking for libxml-2.0... yes
checking for dbus-glib-1... yes
checking for pkg-config... (cached) /usr/bin/pkg-config
checking pkg-config is at least version 0.16... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating data/Makefile
config.status: creating data/icons/Makefile
config.status: creating man/Makefile
config.status: creating config.h
config.status: executing depfiles commands
   dh_auto_build
make -j2
make[1]: Entering directory '/<>'
make  all-recursive
make[2]: Entering directory '/<>'
Making all in src
make[3]: Entering directory '/<>/src'
gcc -DHAVE_CONFIG_H -I. -I..  -Wunused-variable -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 
-I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 
-I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount 
-I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 
-I/usr/include/gdk-pixbuf-2.0 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp 
-I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 
-I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 
-I/usr/lib/x86_64-linux-gnu/dbus-1.0/include -pthread  -I/usr/include/libayatana-appindicator3-0.1 
-I/usr/include/libayatana-indicator3-0.4 -I/usr/include/gtk-3.0 -I/usr/include/pango-1.0 
-I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 
-I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount 
-I/usr/include/blkid 

Bug#1071308: fuse-posixovl: FTBFS: posixovl.c:196:14: error: conflicting types for ‘strlcpy’; have ‘char *(char *, const char *, size_t)’ {aka ‘char *(char *, const char *, long unsigned int)’}

2024-05-17 Thread Santiago Vila

Package: src:fuse-posixovl
Version: 1.3-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
[ -f Makefile ] || ./autogen.sh
dh_auto_configure
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for attr/xattr.h... yes
checking for sys/xattr.h... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for fuse >= 2.7.0... yes
checking for utimensat()... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
config.status: executing depfiles commands
make[1]: Leaving directory '/<>'
   dh_auto_build
make -j2
make[1]: Entering directory '/<>'
make  all-am
make[2]: Entering directory '/<>'
gcc -DHAVE_CONFIG_H -I.  -D_FORTIFY_SOURCE=2 -D_LARGEFILE_SOURCE=1 -D_LARGE_FILES   
-D_FILE_OFFSET_BITS=64 -D_REENTRANT -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -Wall 
-Waggregate-return   -Wmissing-declarations -Wmissing-prototypes -Wredundant-decls   
-Wshadow -Wstrict-prototypes -Winline -pipe -I/usr/include/fuse -D_FILE_OFFSET_BITS=64  -g 
-O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection -Wall -pedantic -c -o posixovl.o posixovl.c
posixovl.c:196:14: error: conflicting types for ‘strlcpy’; have ‘char *(char *, 
const char *, size_t)’ {aka ‘char *(char *, const char *, long unsigned int)’}
  196 | static char *strlcpy(char *dest, const char *src, size_t n)
  |  ^~~
In file included from /usr/include/features.h:502,
 from /usr/include/x86_64-linux-gnu/sys/fsuid.h:21,
 from posixovl.c:16:
/usr/include/x86_64-linux-gnu/bits/string_fortified.h:150:1: note: previous 
definition of ‘strlcpy’ with type ‘size_t(char * restrict,  const char * 
restrict,  size_t)’ {aka ‘long unsigned int(char * restrict,  const char * 
restrict,  long unsigned int)’}
  150 | __NTH (strlcpy (char *__restrict __dest, const char *__restrict __src,
  | ^
make[2]: *** [Makefile:459: posixovl.o] Error 1
make[2]: Leaving directory '/<>'
make[1]: *** [Makefile:330: all] Error 2
make[1]: Leaving directory '/<>'
dh_auto_build: error: make -j2 returned exit code 2
make: *** [debian/rules:22: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.


Bug#1071307: fte: FTBFS: /usr/include/string.h:506:15: error: conflicting declaration of ‘size_t strlcpy(char*, const char*, size_t)’ with ‘C’ linkage

2024-05-17 Thread Santiago Vila

Package: src:fte
Version: 0.50.2b6-20110708-5
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<>'
dh_auto_build -D src -- -f fte-unix.mak
cd src && make -j2 "INSTALL=install --strip-program=true" -f 
fte-unix.mak
make[2]: Entering directory '/<>/src'
g++ -c cfte.cpp -g -O2 -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wpointer-arith -Wconversion 
-Wwrite-strings -Winline -g-I/usr/include/qt3 -I/usr/lib64/qt-3.3/include  
-I/usr/include/slang -DUNIX -DLINUX
g++ -c s_files.cpp -g -O2 -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wpointer-arith -Wconversion 
-Wwrite-strings -Winline -g-I/usr/include/qt3 -I/usr/lib64/qt-3.3/include  
-I/usr/include/slang -DUNIX -DLINUX
g++ -c s_string.cpp -g -O2 -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wpointer-arith -Wconversion 
-Wwrite-strings -Winline -g-I/usr/include/qt3 -I/usr/lib64/qt-3.3/include  
-I/usr/include/slang -DUNIX -DLINUX
In file included from s_string.cpp:3:
/usr/include/string.h:506:15: error: conflicting declaration of ‘size_t 
strlcpy(char*, const char*, size_t)’ with ‘C’ linkage
  506 | extern size_t strlcpy (char *__restrict __dest,
  |   ^~~
In file included from s_string.cpp:1:
s_string.h:10:8: note: previous declaration with ‘C++’ linkage
   10 | size_t strlcpy(char *dst, const char *src, size_t size);
  |^~~
/usr/include/string.h:506:15: error: declaration of ‘size_t strlcpy(char*, 
const char*, size_t) noexcept’ has a different exception specifier
  506 | extern size_t strlcpy (char *__restrict __dest,
  |   ^~~
s_string.h:10:8: note: from previous declaration ‘size_t strlcpy(char*, const 
char*, size_t)’
   10 | size_t strlcpy(char *dst, const char *src, size_t size);
  |^~~
/usr/include/string.h:512:15: error: conflicting declaration of ‘size_t 
strlcat(char*, const char*, size_t)’ with ‘C’ linkage
  512 | extern size_t strlcat (char *__restrict __dest,
  |   ^~~
s_string.h:14:8: note: previous declaration with ‘C++’ linkage
   14 | size_t strlcat(char *dst, const char *src, size_t size);
  |^~~
/usr/include/string.h:512:15: error: declaration of ‘size_t strlcat(char*, 
const char*, size_t) noexcept’ has a different exception specifier
  512 | extern size_t strlcat (char *__restrict __dest,
  |   ^~~
s_string.h:14:8: note: from previous declaration ‘size_t strlcat(char*, const 
char*, size_t)’
   14 | size_t strlcat(char *dst, const char *src, size_t size);
  |^~~
make[2]: *** [fte-unix.mak:159: s_string.o] Error 1
make[2]: *** Waiting for unfinished jobs
cfte.cpp: In function ‘int LoadFile(const char*, const char*, int)’:
cfte.cpp:1885:29: warning: ‘localconfig/’ directive writing 12 bytes into a 
region of size between 1 and 1024 [-Wformat-overflow=]
 1885 | sprintf(tmp, "%slocalconfig/%s", StartDir, CfgName);
  | ^~~~
In file included from /usr/include/stdio.h:964,
 from cfte.cpp:22:
In function ‘int sprintf(char*, const char*, ...)’,
inlined from ‘int LoadFile(const char*, const char*, int)’ at 
cfte.cpp:1885:20:
/usr/include/x86_64-linux-gnu/bits/stdio2.h:30:34: note: 
‘__builtin___sprintf_chk’ output 13 or more bytes (assuming 1036) into a 
destination of size 1024
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
  |  ^~
   31 |   __glibc_objsize (__s), __fmt,
  |   ~
   32 |   __va_arg_pack ());
  |   ~
cfte.cpp: In function ‘int LoadFile(const char*, const char*, int)’:
cfte.cpp:1893:37: warning: ‘config/’ directive writing 7 bytes into a region of 
size between 1 and 1024 [-Wformat-overflow=]
 1893 | sprintf(tmp, "%sconfig/%s", StartDir, CfgName);
  | ^~~
In function ‘int sprintf(char*, const char*, ...)’,
inlined from ‘int LoadFile(const char*, const char*, int)’ at 
cfte.cpp:1893:28:
/usr/include/x86_64-linux-gnu/bits/stdio2.h:30:34: note: 
‘__builtin___sprintf_chk’ output 8 or more bytes 

Bug#1071306: ess: FTBFS: dh_elpa_test failed

2024-05-17 Thread Santiago Vila

Package: src:ess
Version: 24.01.1-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --with elpa
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<>'
make -C doc all html pdf
make[2]: Entering directory '/<>/doc'
making Info documentation...
makeinfo ess.texi
mv -f ess.info info/
makeinfo --no-validate --plaintext --no-split -o - readme.texi \
| perl -pe 'last if /^Concept Index/;' > ../README
makeinfo --no-validate --plaintext --no-split -o - announc.texi \
| perl -pe 'last if /^Concept Index/;' > ../ANNOUNCE
makeinfo --no-validate --plaintext --no-split -o - news.texi > ../NEWS
makeinfo --no-validate --plaintext --no-split -o - onews.texi > ../ONEWS
making HTML documentation...
mkdir -p html
makeinfo --html --no-split --css-include=atouchofstyle.css -o html/ess.html 
ess.texi
makeinfo --html --no-split --css-include=atouchofstyle.css -o html/readme.html 
--no-validate readme.texi
mkdir -p html
makeinfo --html --no-split --css-include=atouchofstyle.css -o html/news.html 
allnews.texi
LANG=C texi2dvi --pdf ess.texi
This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023/Debian) 
(preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode
(./ess.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings,
tables, conditionals, indexing, sectioning, toc, environments, defuns, macros,
cross references, insertions, localization, formatting, microtype,
and turning on texinfo input format.)
Writing index file ess.fn
(/<>/doc/ess-defs.texi) (../VERSION) [1{/var/lib/texm
f/fonts/map/pdftex/updmap/pdftex.map}] [-1] Chapter 1
Writing index file ess.cp
(/<>/doc/currfeat.texi [1])
Cross reference values unknown; you must run TeX again. [2]
(/<>/doc/newfeat.texi [3] [4] [5]
Underfull \hbox (badness 6995) in paragraph at lines 200--207
 @textrm or-simple and ess-gen-proc-buffer-name:projectile-or-directory was re-
named to
[6] [7] [8] [9] [10]) (/<>/doc/credits.texi [11]
(/<>/doc/authors.texi [12])) Chapter 2 [13]
(/<>/doc/installation.texi
(/<>/doc/requires.texi) [14]) Chapter 3 [15]
Writing index file ess.vr

Underfull \hbox (badness 1) in paragraph at lines 419--423
[]@textrm You can switch to any ac-tive ESS pro-cess with the com-mand `@texttt
 M-x
[16] [17] [18]
Overfull \hbox (43.6852pt too wide) in paragraph at lines 665--665
 []  @texttt ^^M(("^\\*R" . ((display-buffer-same-window) (inhibit-same-win
dow . nil)))[] |
[19]
Overfull \hbox (55.18257pt too wide) in paragraph at lines 666--666
 []@texttt ("\\.R$" . ((display-buffer-same-window) (inhibit-same-windo
w . nil)[] |
Chapter 4 [20]
Writing index file ess.ky
[21] [22] [23]
Overfull \hbox (106.92076pt too wide) in paragraph at lines 1020--1020
 []  @texttt ;; somewhat extreme, almost disabling writing in *R*, *shell*
buffers above prompt:[] |
[24] [25] [26]
Underfull \hbox (badness 7832) in paragraph at lines 1188--1191
 []@textttsl C-c C-s[] @textrm Sends the @texttt inferior-ess-search-list-comma
nd[] @textrm com-mand to the
[27] Chapter 5 [28] [29] [30] Chapter 6 [31] Chapter 7 [32] [33] [34] [35]
[36] [37] Chapter 8 [38] [39] [40] Chapter 9 [41] [42] Chapter 10 [43]
Overfull \hbox (37.7724pt too wide) in paragraph at lines 2470--2470
[][] |

Overfull \hbox (43.52109pt too wide) in paragraph at lines 2470--2470
[][] |

Overfull \hbox (14.77765pt too wide) in paragraph at lines 2470--2470
[][] |
[44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] Chapter 12
[55] (/<>/doc/help-s.texi [56] [57]) Chapter 13
[58] (/<>/doc/help-sas.texi [59] [60] [61] [62]
[63] [64] [65] [66]) Chapter 14 [67]
(/<>/doc/help-bugs.texi) Chapter 15 [68]
(/<>/doc/help-jags.texi) Chapter 16 [69]
(/<>/doc/bugs.texi)
(/<>/doc/bugrept.texi)
(/<>/doc/mailing.texi [70]) Appendix A [71]
(Indices) [72]
No file ess.kys.
No file ess.fns.
No file ess.vrs.
No file ess.cps.
[73] )
(see the transcript file for additional information)
Output written on ess.pdf (75 pages, 370571 bytes).
Transcript written on ess.log.
This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023/Debian) 
(preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode
(./ess.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings,
tables, conditionals, indexing, sectioning, toc, environments, defuns, macros,
cross references, insertions, localization, formatting, microtype,
and turning on texinfo input format.)
Writing index file ess.fn
(/<>/doc/ess-defs.texi) (../VERSION) [1{/var/lib/texm
f/fonts/map/pdftex/updmap/pdftex.map}]
(/<>/doc/ess.toc)
(/<>/doc/ess.toc [-1] [-2]) [-3]
(/<>/doc/ess.toc)
(/<>/doc/ess.toc) Chapter 1

Bug#1071304: drogon: FTBFS: Could NOT find c-ares (missing: C-ARES_INCLUDE_DIRS C-ARES_LIBRARIES)

2024-05-17 Thread Santiago Vila

Package: src:drogon
Version: 1.8.7+ds-1.1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --with=cmake
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=/usr 
-DBUILD_SHARED_LIBS=ON -DUSE_SUBMODULE=OFF -DCMAKE_CXX_FLAGS="-std=c++20 
-fcoroutines -Wno-error=restrict -g"
cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr 
-DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var 
-DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF 
-DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON 
-DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" 
-DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_BUILD_TYPE=Release 
-DCMAKE_INSTALL_PREFIX=/usr -DBUILD_SHARED_LIBS=ON -DUSE_SUBMODULE=OFF "-DCMAKE_CXX_FLAGS=-std=c++20 
-fcoroutines -Wno-error=restrict -g" ..
-- The C compiler identification is GNU 13.2.0
-- The CXX compiler identification is GNU 13.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- compiler: GNU
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Looking for C++ include any
-- Looking for C++ include any - found
-- Looking for C++ include string_view
-- Looking for C++ include string_view - found
-- Looking for C++ include coroutine
-- Looking for C++ include coroutine - found
CMake Error at 
/usr/share/cmake-3.29/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
  Could NOT find c-ares (missing: C-ARES_INCLUDE_DIRS C-ARES_LIBRARIES)
Call Stack (most recent call first):
  /usr/share/cmake-3.29/Modules/FindPackageHandleStandardArgs.cmake:600 
(_FPHSA_FAILURE_MESSAGE)
  /usr/lib/x86_64-linux-gnu/cmake/Trantor/Findc-ares.cmake:23 
(find_package_handle_standard_args)
  /usr/share/cmake-3.29/Modules/CMakeFindDependencyMacro.cmake:76 (find_package)
  /usr/lib/x86_64-linux-gnu/cmake/Trantor/TrantorConfig.cmake:54 
(find_dependency)
  CMakeLists.txt:121 (find_package)


-- Configuring incomplete, errors occurred!
cd obj-x86_64-linux-gnu && tail -v -n \+0 CMakeCache.txt
==> CMakeCache.txt <==
# This is the CMakeCache file.
# For build in directory: /<>/obj-x86_64-linux-gnu
# It was generated by CMake: /usr/bin/cmake
# You can edit this file to change values found and used by cmake.
# If you do not want to change any of the values, simply exit the editor.
# If you do want to change a value, simply edit, save, and exit the editor.
# The syntax for the file is as follows:
# KEY:TYPE=VALUE
# KEY is the name of a variable in the cache.
# TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!.
# VALUE is the current value for the KEY.


# EXTERNAL cache entries


//Build Brotli
BUILD_BROTLI:BOOL=ON

//Build drogon_ctl
BUILD_CTL:BOOL=ON

//Build Doxygen documentation
BUILD_DOC:BOOL=OFF

//Build examples
BUILD_EXAMPLES:BOOL=ON

//Build with mysql support
BUILD_MYSQL:BOOL=ON

//Build orm
BUILD_ORM:BOOL=ON

//Build with postgresql support
BUILD_POSTGRESQL:BOOL=ON

//Build with redis support
BUILD_REDIS:BOOL=ON

//Build drogon as a shared lib
BUILD_SHARED_LIBS:BOOL=ON

//Build with sqlite3 support
BUILD_SQLITE:BOOL=ON

//Build yaml config
BUILD_YAML_CONFIG:BOOL=ON

//Path to a file.
C-ARES_INCLUDE_DIRS:PATH=C-ARES_INCLUDE_DIRS-NOTFOUND

//Path to a library.
C-ARES_LIBRARIES:FILEPATH=C-ARES_LIBRARIES-NOTFOUND

//Path to a program.
CMAKE_ADDR2LINE:FILEPATH=/usr/bin/addr2line

//Path to a program.
CMAKE_AR:FILEPATH=/usr/bin/ar

//Choose the type of build, options are: None Debug Release RelWithDebInfo
// MinSizeRel ...
CMAKE_BUILD_TYPE:STRING=Release

//Enable/Disable color output during build.
CMAKE_COLOR_MAKEFILE:BOOL=ON

//CXX compiler
CMAKE_CXX_COMPILER:FILEPATH=/usr/bin/c++

//A wrapper around 'ar' adding the appropriate '--plugin' option
// for the GCC 

Bug#1071303: cups-filters: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file

2024-05-17 Thread Santiago Vila

Package: src:cups-filters
Version: 1.28.17-4
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
Copying file ABOUT-NLS
Copying file config.rpath
Copying file m4/codeset.m4
Copying file m4/extern-inline.m4
Copying file m4/fcntl-o.m4
Copying file m4/gettext.m4
Copying file m4/glibc2.m4
Copying file m4/glibc21.m4
Copying file m4/iconv.m4
Copying file m4/intdiv0.m4

[... snipped ...]

 5623 | ppdClose(ppd);
  | ^~~~
/usr/include/cups/ppd.h:364:25: note: declared here
  364 | extern void ppdClose(ppd_file_t *ppd) 
_CUPS_DEPRECATED_1_6_MSG("Use cupsCopyDestInfo and friends instead.");
  | ^~~~
libtool: link: gcc -D_PPD_DEPRECATED= -g -O2 -Werror=implicit-function-declaration 
-ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -std=gnu11 
-D_GNU_SOURCE -Wl,-z -Wl,relro -Wl,-z -Wl,now -o serial backend/serial-serial.o  -lcups 
-lldap -ltiff -ljpeg
/bin/bash ./libtool  --tag=CC   --mode=link gcc -D_PPD_DEPRECATED="" -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 
-Wall -std=gnu11 -D_GNU_SOURCE  -Wl,-z,relro -Wl,-z,now -o beh backend/beh-beh.o -lcups -lldap -ltiff 
-ljpeg
utils/cups-browsed.c: In function ‘update_cups_queues’:
utils/cups-browsed.c:8635:9: warning: ‘ppdOpenFile’ is deprecated: Use 
cupsCopyDestInfo and friends instead. [-Wdeprecated-declarations]
 8635 | if ((ppd = ppdOpenFile(loadedppd)) == NULL) {
  | ^~
/usr/include/cups/ppd.h:389:26: note: declared here
  389 | extern ppd_file_t   *ppdOpenFile(const char *filename) 
_CUPS_DEPRECATED_1_6_MSG("Use cupsCopyDestInfo and friends instead.");
  |  ^~~
utils/cups-browsed.c:8637:11: warning: ‘ppdLastError’ is deprecated: Use 
cupsCopyDestInfo and friends instead. [-Wdeprecated-declarations]
 8637 |   ppd_status_t status = ppdLastError();
  |   ^~~~
/usr/include/cups/ppd.h:403:25: note: declared here
  403 | extern ppd_status_t ppdLastError(int *line) 
_CUPS_DEPRECATED_1_6_MSG("Use cupsCopyDestInfo and friends instead.");
  | ^~~~
utils/cups-browsed.c:8639:24: warning: ‘ppdErrorString’ is deprecated: Use 
cupsCopyDestInfo and friends instead. [-Wdeprecated-declarations]
 8639 |loadedppd, ppdErrorString(status), linenum);
  |^
/usr/include/cups/ppd.h:398:26: note: declared here
  398 | extern const char   *ppdErrorString(ppd_status_t status) 
_CUPS_DEPRECATED_1_6_MSG("Use cupsCopyDestInfo and friends instead.");
  |  ^~
utils/cups-browsed.c:8646:9: warning: ‘ppdMarkDefaults’ is deprecated: Use 
cupsCopyDestInfo and friends instead. [-Wdeprecated-declarations]
 8646 | ppdMarkDefaults(ppd);
  | ^~~
/usr/include/cups/ppd.h:384:25: note: declared here
  384 | extern void ppdMarkDefaults(ppd_file_t *ppd) 
_CUPS_DEPRECATED_1_6_MSG("Use cupsCopyDestInfo and friends instead.");
  | ^~~
utils/cups-browsed.c:8647:9: warning: ‘cupsMarkOptions’ is deprecated: Use 
cupsCopyDestInfo and friends instead. [-Wdeprecated-declarations]
 8647 | cupsMarkOptions(ppd, p->num_options, p->options);
  | ^~~
/usr/include/cups/ppd.h:362:25: note: declared here
  362 | extern int  cupsMarkOptions(ppd_file_t *ppd, int num_options, 
cups_option_t *options) _CUPS_DEPRECATED_1_6_MSG("Use cupsCopyDestInfo and friends 
instead.");
  | ^~~
utils/cups-browsed.c:8653:11: warning: ‘ppdClose’ is deprecated: Use 
cupsCopyDestInfo and friends instead. [-Wdeprecated-declarations]
 8653 |   ppdClose(ppd);
  |   ^~~~
/usr/include/cups/ppd.h:364:25: note: declared here
  364 | extern void ppdClose(ppd_file_t *ppd) 
_CUPS_DEPRECATED_1_6_MSG("Use cupsCopyDestInfo and friends instead.");
  | ^~~~
utils/cups-browsed.c:8664:11: warning: ‘ppdClose’ is deprecated: Use 
cupsCopyDestInfo and friends instead. [-Wdeprecated-declarations]
 8664 |   ppdClose(ppd);
  |   ^~~~
/usr/include/cups/ppd.h:364:25: note: declared here
  364 | extern void ppdClose(ppd_file_t *ppd) 
_CUPS_DEPRECATED_1_6_MSG("Use cupsCopyDestInfo and friends instead.");
  | ^~~~
utils/cups-browsed.c:8689:15: warning: ‘ppdFindMarkedChoice’ is deprecated: Use 
cupsCopyDestInfo and friends instead. 

Bug#1071302: cppgir: FTBFS: Segmentation fault while "Generating wrapper code for: GObject-2.0;Gio-2.0;Gst-1.0;Gtk-3.0"

2024-05-17 Thread Santiago Vila

Package: src:cppgir
Version: 2.0-2
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- -DCMAKE_INSTALL_LIBDIR=lib -DINTERNAL_EXPECTED=OFF 
-DGENERATED_DIR=/<>/debian/tmp
cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr 
-DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var 
-DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF 
-DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON 
-DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" 
-DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_INSTALL_LIBDIR=lib 
-DINTERNAL_EXPECTED=OFF -DGENERATED_DIR=/<>/debian/tmp ..
-- The C compiler identification is GNU 13.2.0
-- The CXX compiler identification is GNU 13.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features

[... snipped ...]

[ 24%] Linking CXX executable gi-test
/usr/bin/cmake -E cmake_link_script CMakeFiles/gi-test.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong 
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 
-D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now "CMakeFiles/gi-test.dir/test/main.cpp.o" -o 
gi-test  libltest.a -L/usr/lib/x86_64-linux-gnu -lgobject-2.0 -lglib-2.0
make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu'
[ 24%] Built target gi-test
make  -f CMakeFiles/gi-test-17.dir/build.make CMakeFiles/gi-test-17.dir/depend
make[3]: Entering directory '/<>/obj-x86_64-linux-gnu'
cd /<>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> 
/<> /<>/obj-x86_64-linux-gnu /<>/obj-x86_64-linux-gnu 
/<>/obj-x86_64-linux-gnu/CMakeFiles/gi-test-17.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/<>/obj-x86_64-linux-gnu'
make  -f CMakeFiles/gi-test-17.dir/build.make CMakeFiles/gi-test-17.dir/build
make[3]: Entering directory '/<>/obj-x86_64-linux-gnu'
[ 27%] Building CXX object CMakeFiles/gi-test-17.dir/test/main.cpp.o
/usr/bin/c++  -I/<>/obj-x86_64-linux-gnu -I/<> -I/<>/gi 
-I/<>/override -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection 
-Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++23 -Wall -Wextra -Wnon-virtual-dtor -I/usr/include 
-I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -MD -MT 
CMakeFiles/gi-test-17.dir/test/main.cpp.o -MF CMakeFiles/gi-test-17.dir/test/main.cpp.o.d -o CMakeFiles/gi-test-17.dir/test/main.cpp.o -c 
/<>/test/main.cpp
In file included from /<>/gi/gi.hpp:31,
 from /<>/test/main.cpp:10:
/<>/gi/container.hpp:451:21: warning: ‘template struct std::iterator’ is 
deprecated [-Wdeprecated-declarations]
  451 |   : public std::iterator>/test/main.cpp:1:
/usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here
  127 | struct _GLIBCXX17_DEPRECATED iterator
  |  ^~~~
/<>/gi/container.hpp:771:34: warning: ‘template struct std::iterator’ is 
deprecated [-Wdeprecated-declarations]
  771 |   class iterator_t : public std::iterator>/gi/container.hpp:11:
/<>/test/main.cpp: In function ‘void test_collection()’:
/<>/test/main.cpp:1092:21: warning: suggest parentheses around 
assignment used as truth value [-Wparentheses]
 1092 |   assert(uac[i] = a[i]);
/<>/test/main.cpp:1108:21: warning: suggest parentheses around 
assignment used as truth value [-Wparentheses]
 1108 |   assert(uac[i] = a[i]);
[ 29%] Building CXX object CMakeFiles/cppgir.dir/tools/genutils.cpp.o
/usr/bin/c++ -DDEFAULT_GIRPATH=/usr/share:/usr/local/share 
-DDEFAULT_IGNORE_FILE=/usr/share/cppgir/cppgir.ignore:/usr/share/cppgir/cppgir_unix.ignore 
-I/<>/obj-x86_64-linux-gnu -I/<> -g -O2 
-ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++20 -Wall -Wextra -Wnon-virtual-dtor -MD -MT 
CMakeFiles/cppgir.dir/tools/genutils.cpp.o -MF CMakeFiles/cppgir.dir/tools/genutils.cpp.o.d -o 
CMakeFiles/cppgir.dir/tools/genutils.cpp.o -c /<>/tools/genutils.cpp
[ 32%] Building CXX object CMakeFiles/cppgir.dir/tools/function.cpp.o
/usr/bin/c++ -DDEFAULT_GIRPATH=/usr/share:/usr/local/share 
-DDEFAULT_IGNORE_FILE=/usr/share/cppgir/cppgir.ignore:/usr/share/cppgir/cppgir_unix.ignore 
-I/<>/obj-x86_64-linux-gnu -I/<> -g -O2 
-ffile-prefix-map=/<>=. -fstack-protector-strong 

Bug#1071301: concurrent-log-handler: FTBFS: tests/test_stresstest.py:186: AssertionError

2024-05-17 Thread Santiago Vila

Package: src:concurrent-log-handler
Version: 0.9.25-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary --buildsystem=pybuild
   dh_testdir -O--buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
pybuild --configure -i python{version} -p "3.12 3.11"
   dh_auto_build -O--buildsystem=pybuild
pybuild --build -i python{version} -p "3.12 3.11"
I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" 
module
I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel 
--outdir /<>/.pybuild/cpython3_3.12
* Building wheel...
Successfully built concurrent_log_handler-0.9.25-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with 
"installer" module

[... snipped ...]

[MainThread 331208 Fri May 17 17:19:09 2024] Rotation completed (on time) 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.80
[MainThread 331208 Fri May 17 17:19:09 2024] Rolling over because of size
[MainThread 331208 Fri May 17 17:19:09 2024] #gzipped: 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.81.gz
[MainThread 331208 Fri May 17 17:19:09 2024] Wrote rollover time: 1715966354
[MainThread 331208 Fri May 17 17:19:09 2024] Rotation completed (on time) 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.81
[MainThread 331215 Fri May 17 17:19:09 2024] Rolling over because of size
[MainThread 331215 Fri May 17 17:19:09 2024] #gzipped: 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.82.gz
[MainThread 331215 Fri May 17 17:19:09 2024] Wrote rollover time: 1715966354
[MainThread 331215 Fri May 17 17:19:09 2024] Rotation completed (on time) 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.82
[MainThread 331210 Fri May 17 17:19:09 2024] Rolling over because of size
[MainThread 331210 Fri May 17 17:19:09 2024] #gzipped: 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.83.gz
[MainThread 331210 Fri May 17 17:19:09 2024] Wrote rollover time: 1715966354
[MainThread 331210 Fri May 17 17:19:09 2024] Rotation completed (on time) 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.83
[MainThread 331206 Fri May 17 17:19:09 2024] Rolling over because of size
[MainThread 331206 Fri May 17 17:19:09 2024] #gzipped: 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.84.gz
[MainThread 331206 Fri May 17 17:19:09 2024] Wrote rollover time: 1715966354
[MainThread 331206 Fri May 17 17:19:09 2024] Rotation completed (on time) 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.84
[MainThread 331211 Fri May 17 17:19:09 2024] Rolling over because of size
[MainThread 331211 Fri May 17 17:19:09 2024] #gzipped: 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.85.gz
[MainThread 331211 Fri May 17 17:19:09 2024] Wrote rollover time: 1715966354
[MainThread 331211 Fri May 17 17:19:09 2024] Rotation completed (on time) 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.85
[MainThread 331206 Fri May 17 17:19:09 2024] Rolling over because of size
[MainThread 331206 Fri May 17 17:19:09 2024] #gzipped: 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.86.gz
[MainThread 331206 Fri May 17 17:19:09 2024] Wrote rollover time: 1715966354
[MainThread 331206 Fri May 17 17:19:09 2024] Rotation completed (on time) 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.86
[MainThread 331212 Fri May 17 17:19:09 2024] Rolling over because of size
[MainThread 331212 Fri May 17 17:19:09 2024] #gzipped: 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.87.gz
[MainThread 331212 Fri May 17 17:19:09 2024] Wrote rollover time: 1715966354
[MainThread 331212 Fri May 17 17:19:09 2024] Rotation completed (on time) 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.87
[MainThread 331209 Fri May 17 17:19:09 2024] Rolling over because of size
[MainThread 331209 Fri May 17 17:19:09 2024] #gzipped: 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.88.gz
[MainThread 331209 Fri May 17 17:19:09 2024] Wrote rollover time: 1715966354
[MainThread 331209 Fri May 17 17:19:09 2024] Rotation completed (on time) 
/<>/.pybuild/cpython3_3.11/build/output_tests/stress_test.log.2024-05-17_17-19-09.88
[MainThread 331212 Fri May 17 17:19:09 2024] Rolling over because of size
[MainThread 331212 Fri May 17 17:19:09 2024] #gzipped: 

Bug#1071299: cava-alsa: FTBFS: config.c:326:5: error: implicit declaration of function ‘free’

2024-05-17 Thread Santiago Vila

Package: src:cava-alsa
Version: 0.7.4-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
aclocal: warning: couldn't open directory 'm4': No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac,
libtoolize: and rerunning libtoolize and aclocal.
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
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cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
configure.ac:7: warning: The macro `AC_PROG_CC_STDC' is obsolete.
configure.ac:7: You should run autoupdate.
./lib/autoconf/c.m4:1666: AC_PROG_CC_STDC is expanded from...
configure.ac:7: the top level
configure.ac:9: warning: The macro `AM_PROG_LIBTOOL' is obsolete.
configure.ac:9: You should run autoupdate.
m4/libtool.m4:101: AM_PROG_LIBTOOL is expanded from...
configure.ac:9: the top level
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
cat: version: No such file or directory
configure.ac:4: installing './ar-lib'
configure.ac:4: installing './compile'
configure.ac:5: installing './config.guess'
configure.ac:5: installing './config.sub'
configure.ac:2: installing './install-sh'
configure.ac:2: installing './missing'
Makefile.am: installing './depcomp'
   dh_auto_configure
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports the include directive... yes (GNU style)
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of 

Bug#1071298: canna: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file

2024-05-17 Thread Santiago Vila

Package: src:canna
Version: 3.7p3-21
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build
   dh_update_autotools_config
cp -an --reflink=auto canuum/config.guess 
debian/.debhelper/bucket/files/5b6877e0d2db2a7ef37611a0c5dfb81eabbe34519bd648bf71f8b7d4e3847850.tmp
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
mv 
debian/.debhelper/bucket/files/5b6877e0d2db2a7ef37611a0c5dfb81eabbe34519bd648bf71f8b7d4e3847850.tmp
 
debian/.debhelper/bucket/files/5b6877e0d2db2a7ef37611a0c5dfb81eabbe34519bd648bf71f8b7d4e3847850
cp -f /usr/share/misc/config.guess ./canuum/config.guess
cp -an --reflink=auto canuum/config.sub 
debian/.debhelper/bucket/files/86b363ca4362b5f2562a0a6f0c5f9d445de3ab67de34c3e4a7dc0ca1f854e17a.tmp
cp: warning: behavior of -n is non-portable and may change in future; use 
--update=none instead
mv 
debian/.debhelper/bucket/files/86b363ca4362b5f2562a0a6f0c5f9d445de3ab67de34c3e4a7dc0ca1f854e17a.tmp
 
debian/.debhelper/bucket/files/86b363ca4362b5f2562a0a6f0c5f9d445de3ab67de34c3e4a7dc0ca1f854e17a
cp -f /usr/share/misc/config.sub ./canuum/config.sub
   dh_autoreconf
find . canuum ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path 
'*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a  -type f -exec 
md5sum {} + -o -type l -printf "symlink  %p
" > debian/autoreconf.before

[... snipped ...]

mv debian/canna-utils/usr/share/man/ja/man1/delwords.1.dh-new 
debian/canna-utils/usr/share/man/ja/man1/delwords.1
mv debian/canna-utils/usr/share/man/ja/man1/lsdic.1.dh-new 
debian/canna-utils/usr/share/man/ja/man1/lsdic.1
mv debian/canna-utils/usr/share/man/ja/man1/mkdic.1.dh-new 
debian/canna-utils/usr/share/man/ja/man1/mkdic.1
mv debian/canna-utils/usr/share/man/ja/man1/mkromdic.1.dh-new 
debian/canna-utils/usr/share/man/ja/man1/mkromdic.1
mv debian/canna-utils/usr/share/man/ja/man1/mvdic.1.dh-new 
debian/canna-utils/usr/share/man/ja/man1/mvdic.1
mv debian/canna-utils/usr/share/man/ja/man1/rmdic.1.dh-new 
debian/canna-utils/usr/share/man/ja/man1/rmdic.1
mv debian/canna-utils/usr/share/man/man1/addwords.1.dh-new 
debian/canna-utils/usr/share/man/man1/addwords.1
mv debian/canna-utils/usr/share/man/man1/cannacheck.1.dh-new 
debian/canna-utils/usr/share/man/man1/cannacheck.1
mv debian/canna-utils/usr/share/man/man1/cannastat.1.dh-new 
debian/canna-utils/usr/share/man/man1/cannastat.1
mv debian/canna-utils/usr/share/man/man1/catdic.1.dh-new 
debian/canna-utils/usr/share/man/man1/catdic.1
mv debian/canna-utils/usr/share/man/man1/chkconc.1.dh-new 
debian/canna-utils/usr/share/man/man1/chkconc.1
mv debian/canna-utils/usr/share/man/man1/cpdic.1.dh-new 
debian/canna-utils/usr/share/man/man1/cpdic.1
mv debian/canna-utils/usr/share/man/man1/cshost.1.dh-new 
debian/canna-utils/usr/share/man/man1/cshost.1
mv debian/canna-utils/usr/share/man/man1/delwords.1.dh-new 
debian/canna-utils/usr/share/man/man1/delwords.1
mv debian/canna-utils/usr/share/man/man1/lsdic.1.dh-new 
debian/canna-utils/usr/share/man/man1/lsdic.1
mv debian/canna-utils/usr/share/man/man1/mkdic.1.dh-new 
debian/canna-utils/usr/share/man/man1/mkdic.1
mv debian/canna-utils/usr/share/man/man1/mkromdic.1.dh-new 
debian/canna-utils/usr/share/man/man1/mkromdic.1
mv debian/canna-utils/usr/share/man/man1/mvdic.1.dh-new 
debian/canna-utils/usr/share/man/man1/mvdic.1
mv debian/canna-utils/usr/share/man/man1/rmdic.1.dh-new 
debian/canna-utils/usr/share/man/man1/rmdic.1
mv debian/libcanna1g-dev/usr/share/man/ja/man3/RkBgnBun.3.dh-new 
debian/libcanna1g-dev/usr/share/man/ja/man3/RkBgnBun.3
mv debian/libcanna1g-dev/usr/share/man/ja/man3/RkCloseRoma.3.dh-new 
debian/libcanna1g-dev/usr/share/man/ja/man3/RkCloseRoma.3
mv debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtEuc.3.dh-new 
debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtEuc.3
mv debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtHan.3.dh-new 
debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtHan.3
mv debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtHira.3.dh-new 
debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtHira.3
mv debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtKana.3.dh-new 
debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtKana.3
mv debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtRoma.3.dh-new 
debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtRoma.3
mv debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtZen.3.dh-new 
debian/libcanna1g-dev/usr/share/man/ja/man3/RkCvtZen.3
mv debian/libcanna1g-dev/usr/share/man/ja/man3/RkDefineDic.3.dh-new 

Bug#1071296: blobwars: FTBFS: src/headers.h:60:20: error: ambiguating new declaration of ‘void strlcat(char*, const char*, size_t)’

2024-05-17 Thread Santiago Vila

Package: src:blobwars
Version: 2.00-4
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build --parallel
dh: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_update_autotools_config -O--parallel
   dh_auto_configure -O--parallel
dh_auto_configure: warning: Compatibility levels before 10 are deprecated 
(level 9 in use)
   dh_auto_build -O--parallel
dh_auto_build: warning: Compatibility levels before 10 are deprecated (level 9 
in use)
make -j2
make[1]: Entering directory '/<>'
g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection `pkg-config --cflags sdl2 SDL2_mixer SDL2_image SDL2_ttf SDL2_net` -DVERSION=2.00 -DRELEASE=1 
-DUSEPAK=0 -DPAKNAME=\"blobwars.pak\" -DPAKLOCATION=\"/usr/share/games/blobwars/\" -DUNIX 
-DGAMEPLAYMANUAL=\"/usr/share/doc/blobwars/index.html\" -Wall -DLOCALEDIR=\"/usr/share/locale/\" 
-DMEDAL_SERVER_HOST=\"www.parallelrealities.co.uk\" -DMEDAL_SERVER_PORT=80 -Wdate-time -D_FORTIFY_SOURCE=2 -flto -c src/CAudio.cpp
g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection `pkg-config --cflags sdl2 SDL2_mixer SDL2_image SDL2_ttf SDL2_net` -DVERSION=2.00 -DRELEASE=1 
-DUSEPAK=0 -DPAKNAME=\"blobwars.pak\" -DPAKLOCATION=\"/usr/share/games/blobwars/\" -DUNIX 
-DGAMEPLAYMANUAL=\"/usr/share/doc/blobwars/index.html\" -Wall -DLOCALEDIR=\"/usr/share/locale/\" 
-DMEDAL_SERVER_HOST=\"www.parallelrealities.co.uk\" -DMEDAL_SERVER_PORT=80 -Wdate-time -D_FORTIFY_SOURCE=2 -flto -c src/CBoss.cpp
In file included from src/CBoss.cpp:22:
src/headers.h:60:20: error: ambiguating new declaration of ‘void strlcat(char*, 
const char*, size_t)’
   60 | static inline void strlcat(char *dest, const char *src, size_t n) { 
strncat(dest, src, n - 1); }
  |^~~
In file included from src/CAudio.cpp:22:
src/headers.h:60:20: error: ambiguating new declaration of ‘void strlcat(char*, 
const char*, size_t)’
   60 | static inline void strlcat(char *dest, const char *src, size_t n) { 
strncat(dest, src, n - 1); }
  |^~~
In file included from /usr/include/features.h:502,
 from /usr/include/errno.h:25,
 from src/headers.h:22:
/usr/include/x86_64-linux-gnu/bits/string_fortified.h:167:1: note: old 
declaration ‘size_t strlcat(char*, const char*, size_t)’
  167 | __NTH (strlcat (char *__restrict __dest, const char *__restrict __src,
  | ^
src/headers.h:61:20: error: ambiguating new declaration of ‘void strlcpy(char*, 
const char*, size_t)’
   61 | static inline void strlcpy(char *dest, const char *src, size_t n) { 
strncpy(dest, src, n); dest[n - 1] = 0; }
  |^~~
/usr/include/x86_64-linux-gnu/bits/string_fortified.h:150:1: note: old 
declaration ‘size_t strlcpy(char*, const char*, size_t)’
  150 | __NTH (strlcpy (char *__restrict __dest, const char *__restrict __src,
  | ^
In file included from /usr/include/features.h:502,
 from /usr/include/errno.h:25,
 from src/headers.h:22:
/usr/include/x86_64-linux-gnu/bits/string_fortified.h:167:1: note: old 
declaration ‘size_t strlcat(char*, const char*, size_t)’
  167 | __NTH (strlcat (char *__restrict __dest, const char *__restrict __src,
  | ^
src/headers.h:61:20: error: ambiguating new declaration of ‘void strlcpy(char*, 
const char*, size_t)’
   61 | static inline void strlcpy(char *dest, const char *src, size_t n) { 
strncpy(dest, src, n); dest[n - 1] = 0; }
  |^~~
/usr/include/x86_64-linux-gnu/bits/string_fortified.h:150:1: note: old 
declaration ‘size_t strlcpy(char*, const char*, size_t)’
  150 | __NTH (strlcpy (char *__restrict __dest, const char *__restrict __src,
  | ^
make[1]: *** [Makefile:84: CBoss.o] Error 1
make[1]: *** Waiting for unfinished jobs
make[1]: *** [Makefile:84: CAudio.o] Error 1
make[1]: Leaving directory '/<>'
dh_auto_build: error: make -j2 returned exit code 2
make: *** [debian/rules:7: build] Error 255
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2


The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202405/

About the archive rebuild: The build was made on virtual machines
of type m6a.large and r6a.large from AWS, using sbuild and a
reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully 

Bug#1071295: apt-cacher-ng: FTBFS: src/meta.h:326:44: error: operator '!' has no right operand

2024-05-17 Thread Santiago Vila

Package: src:apt-cacher-ng
Version: 3.7.4-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules build
dh build
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- -DSDINSTALL=on -DACNG_CACHE_DIR=/var/cache/apt-cacher-ng 
-DACNG_LOG_DIR=/var/log/apt-cacher-ng -DUSE_LTO=off -DUSE_GOLD=off 
-DUSE_GOLD_MT=off -DCMAKE_SKIP_RPATH=ON
cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake 
-DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc 
-DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON 
-DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON 
-DFETCHCONTENT_FULLY_DISCONNECTED=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON 
-DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DSDINSTALL=on 
-DACNG_CACHE_DIR=/var/cache/apt-cacher-ng -DACNG_LOG_DIR=/var/log/apt-cacher-ng -DUSE_LTO=off 
-DUSE_GOLD=off -DUSE_GOLD_MT=off -DCMAKE_SKIP_RPATH=ON ..
CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument  value or use a ... suffix to tell
  CMake that the project does not need compatibility with older versions.


-- The CXX compiler identification is GNU 13.2.0
-- The C compiler identification is GNU 13.2.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1")
-- Looking for include files sys/param.h, sys/mount.h
-- Looking for include files sys/param.h, sys/mount.h - found
-- Looking for include file sys/vfs.h
-- Looking for include file sys/vfs.h - found
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of int
-- Check size of int - done
-- Check size of long
-- Check size of long - done
-- Looking for strlcpy
-- Looking for strlcpy - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Performing Test COPT_Wall
-- Performing Test COPT_Wall - Success
-- Performing Test COPT_Wextra
-- Performing Test COPT_Wextra - Success
-- Performing Test COPT_Wnounusedparameter
-- Performing Test COPT_Wnounusedparameter - Success
-- Performing Test COPT_fvisibilityhidden
-- Performing Test COPT_fvisibilityhidden - Success
-- Performing Test CXX_VIHI
-- Performing Test CXX_VIHI - Success
-- Performing Test LD_Wlasneeded
-- Performing Test LD_Wlasneeded - Success
-- Performing Test LD_WlO1
-- Performing Test LD_WlO1 - Success
-- Performing Test LD_Wldiscardall
-- Performing Test LD_Wldiscardall - Success
-- Performing Test LD_Wlnoundefined
-- Performing Test LD_Wlnoundefined - Success
-- Performing Test LD_Wlbuildidsha1
-- Performing Test LD_Wlbuildidsha1 - Success
-- Performing Test LD_Wlfuseldgold
-- Performing Test LD_Wlfuseldgold - Success
-- Performing Test GC_SECTIONS
-- Performing Test GC_SECTIONS - Success
-- Performing Test HAVE_LIBWRAP
-- Performing Test HAVE_LIBWRAP - Success
-- Performing Test LD_ATOMIC
-- Performing Test LD_ATOMIC - Success
-- Performing Test HAVE_FSLIB
-- Performing Test HAVE_FSLIB - Success
-- Performing Test HAVE_WORDEXP
-- Performing Test HAVE_WORDEXP - Success
-- Performing Test HAVE_GLOB
-- Performing Test HAVE_GLOB - Success
-- Performing Test HAVE_FADVISE
-- Performing Test HAVE_FADVISE - Success
-- Performing Test HAVE_MADVISE
-- Performing Test HAVE_MADVISE - Success
-- Performing Test HAVE_LINUX_FALLOCATE
-- Performing Test HAVE_LINUX_FALLOCATE - Success
-- Performing Test HAVE_LINUX_SENDFILE
-- Performing Test HAVE_LINUX_SENDFILE - Success
-- Performing Test HAVE_LINUX_EVENTFD
-- Performing Test HAVE_LINUX_EVENTFD - Success
-- Performing Test HAVE_PREAD
-- Performing Test HAVE_PREAD - Success
-- Performing Test HAVE_DAEMON
-- Performing Test HAVE_DAEMON - Success
-- Checking for module 'libsystemd>=209'
--   Found libsystemd, version 256
-- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8")
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Performing Test HAVE_LZMA
-- Performing Test HAVE_LZMA - Success
-- Checking for module 'libevent>=2.1.2'
--   Found libevent, version 2.1.12-stable
-- Checking for module 'libevent_pthreads'
--   Found 

Bug#1071294: amsynth: FTBFS: src/amsynth_dssi_gtk.cpp:238:86: error: invalid conversion from ‘int (*)(const char*, const char*, lo_arg**, int, void*, void*)’ to ‘lo_method_handler’ {aka ‘int (*)(const

2024-05-17 Thread Santiago Vila

Package: src:amsynth
Version: 1.13.2-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:


[...]
 debian/rules binary
dh binary
   dh_update_autotools_config
   debian/rules override_dh_autoreconf
make[1]: Entering directory '/<>'
dh_autoreconf -- ./autogen.sh
autoconf (GNU Autoconf) 2.71
automake (GNU automake) 1.16.5
autoreconf: export WARNINGS=
autoreconf: Entering directory '.'
autoreconf: configure.ac: not using Gettext
autoreconf: running: aclocal --force -I m4
autoreconf: configure.ac: tracing
autoreconf: running: libtoolize --copy --force
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
autoreconf: running: intltoolize --copy --force
autoreconf: configure.ac: not using Gtkdoc
autoreconf: running: aclocal --force -I m4
autoreconf: running: /usr/bin/autoconf --force
autoreconf: running: /usr/bin/autoheader --force
autoreconf: running: automake --add-missing --copy --force-missing
configure.ac:39: installing './compile'
configure.ac:44: installing './config.guess'
configure.ac:44: installing './config.sub'
configure.ac:32: installing './install-sh'
configure.ac:32: installing './missing'
Makefile.am: installing './depcomp'
parallel-tests: installing './test-driver'
autoreconf: Leaving directory '.'
You should update your 'aclocal.m4' by running aclocal.
/<>


Initialized build system. For a common configuration please run:


./configure

make[1]: Leaving directory '/<>'
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- --with-pic --with-lv2  --libdir=/usr/lib
./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking --with-pic --with-lv2 
--libdir=/usr/lib
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports nested variables... (cached) yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for g++... g++
checking whether the compiler supports GNU C++... yes
checking whether g++ accepts -g... yes
checking for g++ option to enable C++11 features... none needed
checking dependency style of g++... none
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu 
format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... 
func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for file... file
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking 

Bug#1071278: systemd 256 breaks dracut

2024-05-17 Thread Thomas Lange
Hi Luca,

it breaks the current version in unstable and earlier. So please add
Breaks: dracut (<= 060+5-7)

-- 

regards Thomas



Bug#1071215: shim-signed 15.8 still on hold. Inconsistencies with shim-helpers-amd64-signed based on 15.8

2024-05-17 Thread Steve McIntyre
On Thu, May 16, 2024 at 11:56:19AM +0200, Eric Valette wrote:
>Package: shim-signed
>Version: 1.40+15.7-1
>Severity: normal
>
>For about two weeks, shim-helpers-amd64-signed is at version 15.8
>(I have downgraded and put it on hold) but corresponding shim-signed
>is apparently blocked and not entering unstable.
>
>Any rationale?

The process of getting a new version of shim-signed is long and
complex, and not entirely under our control:

1. Build shim, test the hell out of it.
2. Upload shim, wait for it to build, check that the binary is
   reproducible.
3. Submit a shim-review issue (or several) at
   https://github.com/rhboot/shim-review/issues .
4. Upload our binaries to Microsoft's site for signing.
5. Wait for the review (and maybe fix things), potentially multiple
   passes here.
6. Wait for the signature to come back.
7. Prepare the shim-signed package with the signed binaries, and test
   like hell.
8. Upload shim-signed.

We're currently at step 5.

-- 
Steve McIntyre, Cambridge, UK.st...@einval.com
There's no sensation to compare with this
Suspended animation, A state of bliss



Bug#1071293: ddcci-dkms: Fails to build on linux-image-6.8.9-amd64

2024-05-17 Thread Ben Morris
Package: ddcci-dkms
Version: 0.4.4-1
Severity: grave
Justification: renders package unusable

Dear Maintainer,

Although upstream has not yet bumped the version number, I believe they have
committed changes that fix this to their GitLab repo.

*** /var/lib/dkms/ddcci/0.4.4/build/make.log
DKMS make.log for ddcci-0.4.4 for kernel 6.8.9-amd64 (x86_64)
Fri 17 May 20:53:15 BST 2024
make: Entering directory '/var/lib/dkms/ddcci/0.4.4/build'
make -C "ddcci"
make[1]: Entering directory '/var/lib/dkms/ddcci/0.4.4/build/ddcci'
make -C "/lib/modules/6.8.9-amd64/build" 
M="/var/lib/dkms/ddcci/0.4.4/build/ddcci" modules
make[2]: Entering directory '/usr/src/linux-headers-6.8.9-amd64'
  CC [M]  /var/lib/dkms/ddcci/0.4.4/build/ddcci/ddcci.o
/var/lib/dkms/ddcci/0.4.4/build/ddcci/ddcci.c: In function ‘ddcci_detect’:
/var/lib/dkms/ddcci/0.4.4/build/ddcci/ddcci.c:1673:9: error: implicit 
declaration of function ‘strlcpy’; did you mean ‘strscpy’? 
[-Werror=implicit-function-declaration]
 1673 | strlcpy(info->type, (outer_addr == DDCCI_DEFAULT_DEVICE_ADDR) ? 
"ddcci" : "ddcci-dependent", I2C_NAME_SIZE);
  | ^~~
  | strscpy
/var/lib/dkms/ddcci/0.4.4/build/ddcci/ddcci.c: At top level:
/var/lib/dkms/ddcci/0.4.4/build/ddcci/ddcci.c:1831:27: error: ‘I2C_CLASS_DDC’ 
undeclared here (not in a function); did you mean ‘I2C_CLASS_SPD’?
 1831 | .class  = I2C_CLASS_DDC,
  |   ^
  |   I2C_CLASS_SPD
cc1: some warnings being treated as errors
make[4]: *** [/usr/src/linux-headers-6.8.9-common/scripts/Makefile.build:248: 
/var/lib/dkms/ddcci/0.4.4/build/ddcci/ddcci.o] Error 1
make[3]: *** [/usr/src/linux-headers-6.8.9-common/Makefile:1946: 
/var/lib/dkms/ddcci/0.4.4/build/ddcci] Error 2
make[2]: *** [/usr/src/linux-headers-6.8.9-common/Makefile:252: __sub-make] 
Error 2
make[2]: Leaving directory '/usr/src/linux-headers-6.8.9-amd64'
make[1]: *** [Makefile:38: ddcci.ko] Error 2
make[1]: Leaving directory '/var/lib/dkms/ddcci/0.4.4/build/ddcci'
make: *** [Makefile:28: ddcci] Error 2
make: Leaving directory '/var/lib/dkms/ddcci/0.4.4/build'


-- System Information:
Debian Release: trixie/sid
  APT prefers unstable
  APT policy: (500, 'unstable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 6.7.12-amd64 (SMP w/8 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8), 
LANGUAGE=en_GB:en_US
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages ddcci-dkms depends on:
ii  dkms  3.0.13-1

ddcci-dkms recommends no packages.

ddcci-dkms suggests no packages.

-- no debconf information


Bug#1071276: Is 1:1.2.13.dfsg-1 affected by CVE-2023-45853, and if it is, will 1:1.3.dfsg-3.1 be backported to bookworm?

2024-05-17 Thread John Waffle
This report came from a free tool, trivy, I filed a Github discussion about
it here: https://github.com/aquasecurity/trivy/discussions/6722

On Fri, May 17, 2024 at 12:08 PM Salvatore Bonaccorso 
wrote:

> Hi,
>
> On Fri, May 17, 2024 at 10:43:26AM -0400, John Waffle wrote:
> > Package: zlib
> > Version: 1:1.2.13.dfsg-1
> >
> > Related bug reports:
> > - https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1054290
> > - https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1056718
> >
> > These were marked as resolved but it seems like I'm getting some
> > contradictory information.
> >
> > - The zlib package page https://tracker.debian.org/pkg/zlib says that
> > CVE-2023-45853 <
> https://security-tracker.debian.org/tracker/CVE-2023-45853>
> > is ignored, what is the basis for ignoring this CVE?
> > - Is there a plan to backport zlib 1:1.3.dfsg-3.1 to bookworm? It looks
> > like it's currently in trixie
> >
> > The maintainer of zlib said this in a comment
> > https://github.com/madler/zlib/pull/843#issuecomment-2050417533
> >
> > > Sigh. I tried.
> >
> > > It is this page:
> > https://security-tracker.debian.org/tracker/CVE-2023-45853 , that
> > incorrectly marks 1:1.2.13.dfsg-1 as vulnerable, when in fact it has no
> > minizip code in it whatsoever. (I verified that by downloading it and
> > listing the external symbols in the .so file.) I managed to reach someone
> > at debian.org who seems to be in control of that page, but instead of
> > fixing the page, they defended it, even though it's wrong.
> >
> > Can a Debian maintainer elaborate on this? Do the Debian maintainers feel
> > like this version of zlib is vulnerable or not?
> >
> > If the Debian maintainers could confirm that this is not a real
> > vulnerability, maybe then we can get trivy to stop flagging this as a
> > critical vulnerability in their scan. This is a rather big problem
> because
> > a lot of images use Debian (bookworm specifically) and a lot of base
> images
> > (e.g. nginx) are getting flagged for this.
>
> Again, the notes explain the tracking; The zlib is *source* in the
> security-tracker not the binary package produced. Thus the entry reads
> as:
>
> - zlib 1:1.3.dfsg-2 (bug #1054290)
> [bookworm] - zlib  (contrib/minizip not built and
> producing binary packages)
> [bullseye] - zlib  (contrib/minizip not built and
> producing binary packages)
> [buster] - zlib  (contrib/minizip not built and producing
> binary packages)
>
> is there in the wording which you think needs improvement?
>
> Why does your security-scanner not consider the information gathered
> by the security-tracker including the 'ignored' state there? Can you
> bring that to your vendor of the security scanner?
>
> Regards,
> Salvatore
>


Bug#1071291: Please add a neovim-dbg package in order to ease to find issues

2024-05-17 Thread Sebastian Ramacher
Control: tags -1 moreinfo

Hi Patrick

On 2024-05-17 21:31:06 +0200, Patrick Winnertz wrote:
> Package: neovim
> Version: 0.9.5-7
> Severity: wishlist
> 
> Hey,
> 
> please add a neovim-dbg package so that it's easier to debug issues with
> neovim without the need to rebuild it locally.

Are you looking for neovim-dbgsym?

Cheers
-- 
Sebastian Ramacher



Bug#1071292: openssh-server: sshd fails to restart at package upgrade, future logins to server impossible

2024-05-17 Thread Sven-Haegar Koch
Package: openssh-server
Version: 1:9.7p1-5
Severity: important

Dear Maintainer,

I just upgraded openssh as part of my normal "apt dist-upgrade" every
few days, from 1:9.7p1-4 to 1:9.7p1-5.

The whole apt went through without any errors - but afterwards sshd
was no longer running / listening on its network ports.

Most likely related messages from syslog:

May 17 21:19:31 aurora64 systemd[1]: Reloading finished in 370 ms.
May 17 21:19:31 aurora64 sshd[1910600]: Received signal 15; terminating.
May 17 21:19:31 aurora64 systemd[1]: Stopping ssh.service - OpenBSD Secure 
Shell server...
May 17 21:19:31 aurora64 systemd[1]: ssh.service: Deactivated successfully.
May 17 21:19:31 aurora64 systemd[1]: Stopped ssh.service - OpenBSD Secure Shell 
server.
May 17 21:19:31 aurora64 systemd[1]: Starting ssh.service - OpenBSD Secure 
Shell server...
May 17 21:19:31 aurora64 systemd[1]: ssh.service: Control process exited, 
code=exited, status=127/n/a
May 17 21:19:31 aurora64 systemd[1]: ssh.service: Failed with result 
'exit-code'.
May 17 21:19:31 aurora64 systemd[1]: Failed to start ssh.service - OpenBSD 
Secure Shell server.
May 17 21:19:31 aurora64 systemd[1]: ssh.service: Scheduled restart job, 
restart counter is at 1.
May 17 21:19:32 aurora64 systemd[1]: Starting ssh.service - OpenBSD Secure 
Shell server...
May 17 21:19:32 aurora64 systemd[1]: ssh.service: Control process exited, 
code=exited, status=127/n/a
May 17 21:19:32 aurora64 systemd[1]: ssh.service: Failed with result 
'exit-code'.
May 17 21:19:32 aurora64 systemd[1]: Failed to start ssh.service - OpenBSD 
Secure Shell server.
May 17 21:19:32 aurora64 systemd[1]: Reloading requested from client PID 
2653532 ('systemctl') (unit session-4.scope)...
May 17 21:19:32 aurora64 systemd[1]: Reloading...
May 17 21:19:32 aurora64 systemd[1]: systemd-fsckd.socket: Socket unit 
configuration has changed while unit has been running, no open socket file 
descriptor left. The socket unit is not functional until restarted.
May 17 21:19:32 aurora64 systemd[1]: Reloading finished in 384 ms.
May 17 21:19:32 aurora64 systemd[1]: ssh.service: Scheduled restart job, 
restart counter is at 2.
May 17 21:19:32 aurora64 systemd[1]: Starting ssh.service - OpenBSD Secure 
Shell server...
May 17 21:19:32 aurora64 systemd[1]: ssh.service: Control process exited, 
code=exited, status=127/n/a
May 17 21:19:32 aurora64 systemd[1]: ssh.service: Failed with result 
'exit-code'.
May 17 21:19:32 aurora64 systemd[1]: Failed to start ssh.service - OpenBSD 
Secure Shell server.
May 17 21:19:32 aurora64 systemd[1]: ssh.service: Scheduled restart job, 
restart counter is at 3.
May 17 21:19:32 aurora64 systemd[1]: Starting ssh.service - OpenBSD Secure 
Shell server...
May 17 21:19:32 aurora64 systemd[1]: ssh.service: Control process exited, 
code=exited, status=127/n/a
May 17 21:19:32 aurora64 systemd[1]: ssh.service: Failed with result 
'exit-code'.
May 17 21:19:32 aurora64 systemd[1]: Failed to start ssh.service - OpenBSD 
Secure Shell server.
May 17 21:19:33 aurora64 systemd[1]: ssh.service: Scheduled restart job, 
restart counter is at 4.
May 17 21:19:33 aurora64 systemd[1]: Starting ssh.service - OpenBSD Secure 
Shell server...
May 17 21:19:33 aurora64 systemd[1]: ssh.service: Control process exited, 
code=exited, status=127/n/a
May 17 21:19:33 aurora64 systemd[1]: ssh.service: Failed with result 
'exit-code'.
May 17 21:19:33 aurora64 systemd[1]: Failed to start ssh.service - OpenBSD 
Secure Shell server.
May 17 21:19:33 aurora64 systemd[1]: ssh.service: Scheduled restart job, 
restart counter is at 5.
May 17 21:19:33 aurora64 systemd[1]: ssh.service: Start request repeated too 
quickly.
May 17 21:19:33 aurora64 systemd[1]: ssh.service: Failed with result 
'exit-code'.
May 17 21:19:33 aurora64 systemd[1]: Failed to start ssh.service - OpenBSD 
Secure Shell server.

Did not find anything real in the logs why it would not restart,
just that it died.

A manual "systemctl restart ssh" afterwards just made ssh work again.

May 17 21:35:29 aurora64 systemd[1]: Starting ssh.service - OpenBSD Secure 
Shell server...
May 17 21:35:29 aurora64 sshd[2674496]: Server listening on 0.0.0.0 port 42666.
May 17 21:35:29 aurora64 sshd[2674496]: Server listening on :: port 42666.
May 17 21:35:29 aurora64 systemd[1]: Started ssh.service - OpenBSD Secure Shell 
server.
May 17 21:35:29 aurora64 sshd[2674496]: Server listening on 0.0.0.0 port 22.
May 17 21:35:29 aurora64 sshd[2674496]: Server listening on :: port 22.

Sadly I saw this problem too late, and had already looged out of one
machine again, and now can't login again until I am the next time
in the office and able to use the console to restart sshd :/

Greetings,
Haegar

PS:
Systemd was updated from 255.5-1 to 256~rc2-3 in the same apt
run, so could perhaps also be some ugly interaction between the
two updates.

-- System Information:
Debian Release: trixie/sid
  APT prefers stable-security
  APT policy: (500, 'stable-security'), (500, 'unstable'), (500, 

Bug#1069790: librust-err-derive-dev: impossible to install

2024-05-17 Thread Jonas Smedegaard
Package: librust-err-derive-dev
Version: 0.3.1-1+b1
Followup-For: Bug #1069790

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

This issue is not yet solved. Not sure why it was flagged as done, without 
further information - it is not yet done.

If you need more details, then please elaborate which details is needed.

 - Jonas

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