Bug#888902: Configuration file /lib/systemd/system/boinc-client.service is marked executable. Please remove executable permission bits.

2018-01-30 Thread Vedran Miletić
Package: boinc
Version: 7.8.6+dfsg-1

Hi,

systemd 237 warned me about executable bits on
/lib/systemd/system/boinc-client.service.

Regards,
Vedran



Bug#838591: gcc-6: GROMACS compiled with gcc 6.2.0-4 fails the tests

2016-09-28 Thread Vedran Miletić
On 09/27/2016 09:20 PM, Matthias Klose wrote:
> reassign 838591 gromacs
> thanks
> 
> there is no evidence provided if gromacs has invalid code which is now 
> triggered
> by GCC 6, or of this is a real GCC issue.
> 
> Please provide a self-contained test case if possible.
> 

Indeed, after installing updates from unstable for the last few days
this is now working correctly, even though neither GROMACS nor GCC changed.

Apologies for misjudgment, please mark as invalid.

Thanks,
Vedran

-- 
Vedran Miletić
vedran.miletic.net



Bug#838591: gcc-6: GROMACS compiled with gcc 6.2.0-4 fails the tests

2016-09-22 Thread Vedran Miletić
Package: gcc-6
Version: 6.2.0-4
Severity: important

Dear Maintainer,

Building GROMACS branch release-2016 from source with gcc 6.2.0-4 and running
tests results in:

Test project /home/vedranm/workspace/CompChem/gromacs/build-gcc
  Start  1: TestUtilsUnitTests
 1/20 Test  #1: TestUtilsUnitTests ...   Passed0.29 sec
  Start  2: GmxlibTests
 2/20 Test  #2: GmxlibTests ..   Passed0.06 sec
  Start  3: MdlibUnitTest
 3/20 Test  #3: MdlibUnitTest    Passed0.04 sec
  Start  4: CommandLineUnitTests
 4/20 Test  #4: CommandLineUnitTests .***Exception: SegFault  0.07 
sec
[==] Running 46 tests from 6 test cases.
[--] Global test environment set-up.
[--] 3 tests from CommandLineHelpModuleTest
[ RUN  ] CommandLineHelpModuleTest.PrintsGeneralHelp
[   OK ] CommandLineHelpModuleTest.PrintsGeneralHelp (25 ms)
[ RUN  ] CommandLineHelpModuleTest.PrintsHelpOnTopic

  Start  5: FFTUnitTests
 5/20 Test  #5: FFTUnitTests .   Passed0.94 sec
  Start  6: MathUnitTests
 6/20 Test  #6: MathUnitTests    Passed0.05 sec
  Start  7: RandomUnitTests
 7/20 Test  #7: RandomUnitTests ..   Passed0.06 sec
  Start  8: OnlineHelpUnitTests
 8/20 Test  #8: OnlineHelpUnitTests ..***Exception: SegFault  0.07 
sec
[==] Running 22 tests from 4 test cases.
[--] Global test environment set-up.
[--] 6 tests from TextTableFormatterTest
[ RUN  ] TextTableFormatterTest.HandlesBasicCase
[   OK ] TextTableFormatterTest.HandlesBasicCase (6 ms)
[ RUN  ] TextTableFormatterTest.HandlesEmptyColumnTitles
[   OK ] TextTableFormatterTest.HandlesEmptyColumnTitles (0 ms)
[ RUN  ] TextTableFormatterTest.HandlesIndentation
[   OK ] TextTableFormatterTest.HandlesIndentation (0 ms)
[ RUN  ] TextTableFormatterTest.HandlesOverflowingLines
[   OK ] TextTableFormatterTest.HandlesOverflowingLines (4 ms)
[ RUN  ] TextTableFormatterTest.HandlesLastColumnFolding
[   OK ] TextTableFormatterTest.HandlesLastColumnFolding (1 ms)
[ RUN  ] TextTableFormatterTest.HandlesEmptyColumns
[   OK ] TextTableFormatterTest.HandlesEmptyColumns (0 ms)
[--] 6 tests from TextTableFormatterTest (12 ms total)

[--] 3 tests from HelpManagerTest
[ RUN  ] HelpManagerTest.HandlesRootTopic

  Start  9: OptionsUnitTests
 9/20 Test  #9: OptionsUnitTests .***Exception: SegFault  0.03 
sec
[==] Running 74 tests from 10 test cases.
[--] Global test environment set-up.
[--] 5 tests from AbstractOptionStorageTest
[ RUN  ] AbstractOptionStorageTest.HandlesSetInFinish

  Start 10: UtilityUnitTests
10/20 Test #10: UtilityUnitTests .   Passed0.14 sec
  Start 11: FileIOTests
11/20 Test #11: FileIOTests ..   Passed0.07 sec
  Start 12: SimdUnitTests
12/20 Test #12: SimdUnitTests    Passed0.18 sec
  Start 13: LegacyToolsTests
13/20 Test #13: LegacyToolsTests .   Passed0.47 sec
  Start 14: GmxPreprocessTests
14/20 Test #14: GmxPreprocessTests ...   Passed0.29 sec
  Start 15: CorrelationsTest
15/20 Test #15: CorrelationsTest .   Passed0.79 sec
  Start 16: AnalysisDataUnitTests
16/20 Test #16: AnalysisDataUnitTests ***Exception: SegFault  0.06 
sec
[==] Running 69 tests from 14 test cases.
[--] Global test environment set-up.
[--] 3 tests from AnalysisDataInitializationTest
[ RUN  ] AnalysisDataInitializationTest.BasicInitialization
[   OK ] AnalysisDataInitializationTest.BasicInitialization (1 ms)
[ RUN  ] AnalysisDataInitializationTest.ChecksMultiColumnModules
[   OK ] AnalysisDataInitializationTest.ChecksMultiColumnModules (17 ms)
[ RUN  ] AnalysisDataInitializationTest.ChecksMultipointModules
[   OK ] AnalysisDataInitializationTest.ChecksMultipointModules (0 ms)
[--] 3 tests from AnalysisDataInitializationTest (18 ms total)

[--] 8 tests from AnalysisDataCommonTest/0, where TypeParam = 
(anonymous namespace)::SimpleInputData
[ RUN  ] AnalysisDataCommonTest/0.CallsModuleCorrectly

  Start 17: SelectionUnitTests
17/20 Test #17: SelectionUnitTests ...   Passed0.72 sec
  Start 18: TrajectoryAnalysisUnitTests
18/20 Test #18: TrajectoryAnalysisUnitTests ..***Exception: SegFault  0.06 
sec
[==] Running 48 tests from 8 test cases.
[--] Global test environment set-up.
[--] 11 tests from AngleModuleTest
[ RUN  ] AngleModuleTest.ComputesSimpleAngles

WARNING: If there are molecules in the input trajectory file
 that are broken across periodic boundaries, they
 cannot be made whole (or treated as whole) without
 you providing a run input file.


  Start 19: 

Bug#827122: liboasis3-0d: libpsmile.so is a broken symbolic link to libpsmile.MPI1.so.0d

2016-06-12 Thread Vedran Miletić
Package: liboasis3-0d
Version: 3.mct+dfsg.121022-7+b1
Severity: important

Dear Maintainer,

libpsmile.so in /usr/lib/x86_64-linux-gnu is a broken symlink to

libpsmile.MPI1.so.0d

instead of

libpsmile.so.0d

which exists in the same directory (extra .MPI1).

-- System Information:
Debian Release: stretch/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386, armhf

Kernel: Linux 4.6.0-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages liboasis3-0d depends on:
ii  libc62.22-11
ii  libnetcdf11  1:4.4.0-2
ii  libnetcdff6  4.4.4+ds-2

liboasis3-0d recommends no packages.

liboasis3-0d suggests no packages.

-- no debconf information



Bug#827121: libdwarf1: libdwarf.so is a broken symbolic link to debian/tmp/usr/lib/x86_64-linux-gnu/libdwarf.so.1

2016-06-12 Thread Vedran Miletić
Package: libdwarf1
Version: 20160507+git20160523.9086738-1
Severity: important

Dear Maintainer,

libdwarf.so in /usr/lib/x86_64-linux-gnu is a broken symlink to

debian/tmp/usr/lib/x86_64-linux-gnu/libdwarf.so.1

instead of

libdwarf.so.1

which exists in the same directory.

-- System Information:
Debian Release: stretch/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386, armhf

Kernel: Linux 4.6.0-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages libdwarf1 depends on:
ii  libc62.22-11
ii  libelf1  0.165-3
ii  zlib1g   1:1.2.8.dfsg-2+b1

libdwarf1 recommends no packages.

libdwarf1 suggests no packages.

-- no debconf information



Bug#827120: libhmsbeagle1v5: libhmsbeagle-opencl.so is a broken symbolic link to /libhmsbeagle-opencl.so.21 (extra /)

2016-06-12 Thread Vedran Miletić
Package: libhmsbeagle1v5
Version: 2.1.2+20151220-1
Severity: important

Dear Maintainer,

libhmsbeagle-opencl.so in /usr/lib/x86_64-linux-gnu is a broken symlink to

/libhmsbeagle-opencl.so.21

instead of

libhmsbeagle-opencl.so.21

which exists in the same directory (/ at start is extra).

-- System Information:
Debian Release: stretch/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386, armhf

Kernel: Linux 4.6.0-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages libhmsbeagle1v5 depends on:
ii  libc62.22-11
ii  libgcc1  1:6.1.1-6
ii  libstdc++6   6.1.1-6
ii  mesa-opencl-icd [opencl-icd] 11.2.2-1
ii  ocl-icd-libopencl1 [libopencl1]  2.2.9-1

libhmsbeagle1v5 recommends no packages.

libhmsbeagle1v5 suggests no packages.

-- no debconf information



Bug#820590: tinc@.service systemd unit is broken

2016-04-10 Thread Vedran Miletić
Package: tinc
Version: 1.0.27-1

Hi,

I noticed tinc now ships systemd units, which is a nice improvement.
Unfortunately, they do not work for me, as there is no /usr/bin/tinc
and it does not understand start/stop/reload. Specifically, instead
of:

ExecStart=/usr/sbin/tinc -n %i start -D
ExecReload=/usr/sbin/tinc -n %i reload
ExecStop=/usr/sbin/tinc -n %i stop

they should read:

ExecStart=/usr/sbin/tincd -n %i -D
ExecReload=/usr/sbin/tincd -n %i -k HUP
ExecStop=/usr/sbin/tincd -n %i -k

Regards,
Vedran

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Bug#806971: clinfo hangs with glibc 2.21-1

2015-12-03 Thread Vedran Miletić
;, operate=0x7762aeb0
, args=0x7fffc020) at dl-error.c:187
errcode = 32767
c = {objname = 0x7782d0d0 <last_result+16>, errstring =
0x7782d0d8 <last_result+24>, malloced = 0x7782d0c8
<last_result+8>, errcode = 0x7fffbf04, env = {{__jmpbuf = {0,
-8142954493725423595, 140737488338976, 6395616, 20, 6362144,
-8142935570630096875, -8142952879205824491}, __mask_was_saved =
6362144, __saved_mask = {__val = {0, 140737351947837, 1, 0,
  0, 140737343825392, 0, 6394976, 6395616,
140737351974624, 6395056, 0, 6395616, 140737351974624, 4294967296,
140737346370212}
catchp = 0x77ffdfe0 
old = 
#18 0x7762b4d9 in _dlerror_run
(operate=operate@entry=0x7762aeb0 ,
args=args@entry=0x7fffc020) at dlerror.c:163
result = 0x7782d0c0 
#19 0x7762afa1 in __dlopen (file=,
mode=) at dlopen.c:87
args = {file = 0x6196e0 "libMesaOpenCL.so.1", mode = 1, new =
0x0, caller = 0x77bd4e0a}
#20 0x77bd4e0a in ?? () from /usr/lib/x86_64-linux-gnu/libOpenCL.so.1
No symbol table info available.
#21 0x77bd4f60 in ?? () from /usr/lib/x86_64-linux-gnu/libOpenCL.so.1
No symbol table info available.
#22 0x77bd54f9 in ?? () from /usr/lib/x86_64-linux-gnu/libOpenCL.so.1
No symbol table info available.
#23 0x77bd5d2b in clGetPlatformIDs () from
/usr/lib/x86_64-linux-gnu/libOpenCL.so.1
No symbol table info available.
#24 0x00401328 in ?? ()
No symbol table info available.
#25 0x7784e810 in __libc_start_main (main=0x401170, argc=1,
argv=0x7fffc318, init=, fini=,
rtld_fini=, stack_end=0x7fffc308) at
libc-start.c:291
result = 
unwind_buf = {cancel_jmp_buf = {{jmp_buf = {0,
8142935027570919445, 4199799, 140737488339728, 0, 0,
-8142935573733881835, -8142952554844436459}, mask_was_saved = 0}},
priv = {pad = {0x0, 0x0, 0x408aa0, 0x7fffc318}, data = {prev =
0x0, cleanup = 0x0, canceltype = 4229792}}}
not_first_call = 
#26 0x004015a0 in ?? ()
No symbol table info available.

-- 
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http://vedranmileti.ch/



Bug#767547: dpkg-maintscript-helper: error: original symlink target is not an absolute path

2014-10-31 Thread Vedran Miletić
Package: php-htmlpurifier
Version: 4.6.0-1

When installing 4.6.0-1 I get:

Selecting previously unselected package php-htmlpurifier.
(Reading database ... 104406 files and directories currently installed.)
Preparing to unpack .../php-htmlpurifier_4.6.0-1_all.deb ...
dpkg-maintscript-helper: error: original symlink target is not an absolute path
dpkg: error processing archive
/var/cache/apt/archives/php-htmlpurifier_4.6.0-1_all.deb (--unpack):
 subprocess new pre-installation script returned error exit status 1
dpkg-maintscript-helper: error: original symlink target is not an absolute path
dpkg: error while cleaning up:
 subprocess new post-removal script returned error exit status 1
Errors were encountered while processing:
 /var/cache/apt/archives/php-htmlpurifier_4.6.0-1_all.deb
E: Sub-process /usr/bin/dpkg returned an error code (1)
Failed to perform requested operation on package.  Trying to recover:

and package fails to install. Can this issue be fixed?

Regards,
Vedran Miletić


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Bug#766382: systemd-sysv-generator[8666]: [/etc/init.d/root-system-proofd:13] Failed to translate LSB dependency $network,, ignoring: Invalid argument

2014-10-22 Thread Vedran Miletić
Package: root-system
Version: 5.34.19+dfsg-1

Using systemd with proofd results in:

systemd-sysv-generator[8666]: [/etc/init.d/root-system-
proofd:13]
Failed to translate LSB dependency $network,, ignoring: Invalid
argument

Changing

# Should-Start:  $network, root-file-server
# Should-Stop:   $network, root-file-server

to

# Should-Start:  $network root-file-server
# Should-Stop:   $network root-file-server

fixes the issue.

Regards,
Vedran


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Bug#760649: systemd Failed at step CHDIR spawning /bin/kill: No such file or directory

2014-09-06 Thread Vedran Miletić
Package: systemd
Version: 214-1

Upgrading from 208-8 I get:

Ruj 06 16:30:26 akari systemd[7107]: Failed at step CHDIR spawning
/bin/kill: No such file or directory
Ruj 06 16:30:26 akari systemd[18412]: systemd-exit.service: main
process exited, code=exited, status=200/CHDIR
Ruj 06 16:30:26 akari systemd[18412]: Failed to start Exit the Session.
Ruj 06 16:30:26 akari systemd[18412]: Dependency failed for Exit the Session.
Ruj 06 16:30:26 akari systemd[18412]: Unit systemd-exit.service
entered failed state
Ruj 06 16:31:59 akari systemd[1]: user@65534.service stop-sigterm
timed out. Killing.
Ruj 06 16:31:59 akari systemd[1]: Unit user@65534.service entered failed state.

Not sure what exactly gets broken. Reboot works normally.

Regards,
Vedran Miletić


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Bug#757352: /etc/bash_completion.d/nikola contains /home/tin/projects/debian/nikola/nikola.git/nikola as first line

2014-08-07 Thread Vedran Miletić
Package: nikola
Version: 7.0.1-2

File /etc/bash_completion.d/nikola contains
/home/tin/projects/debian/nikola/nikola.git/nikola as first line,
which it probably shouldn't.

Regards,
Vedran


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Bug#747949: systemd Failed to add dependency on systemd-modules-load, ignoring: Invalid argument upon

2014-05-13 Thread Vedran Miletić
Package: iptables-persistent
Version: 1.0.1

Using systemd as init I get:

May 13 11:55:33 inf2 systemd[1]: Reloading.
May 13 11:55:34 inf2 systemd[1]: Stopping netfilter persistent configuration...
May 13 11:55:34 inf2 systemd[1]: netfilter-persistent.service: control
process exited, code=exited status=1
May 13 11:55:34 inf2 systemd[1]: Stopped netfilter persistent configuration.
May 13 11:55:34 inf2 systemd[1]: Unit netfilter-persistent.service
entered failed state.
May 13 11:55:34 inf2 netfilter-persistent[21421]: Automatic flush
disabled; use '/usr/sbin/netfilter-persistent flush'
May 13 11:55:34 inf2 systemd[1]: Reloading.
May 13 11:55:34 inf2 systemd[1]:
[/lib/systemd/system/netfilter-persistent.service:5] Failed to add
dependency on systemd-modules-load, ignoring: Invalid argument
May 13 11:55:34 inf2 systemd[1]:
[/lib/systemd/system/netfilter-persistent.service:6] Failed to add
dependency on systemd-modules-load, ignoring: Invalid argument
May 13 11:55:43 inf2 systemd[1]: Reloading.
May 13 11:55:43 inf2 systemd[1]:
[/lib/systemd/system/netfilter-persistent.service:5] Failed to add
dependency on systemd-modules-load, ignoring: Invalid argument
May 13 11:55:43 inf2 systemd[1]:
[/lib/systemd/system/netfilter-persistent.service:6] Failed to add
dependency on systemd-modules-load, ignoring: Invalid argument
May 13 11:55:43 inf2 systemd[1]: Starting netfilter persistent configuration...
May 13 11:55:43 inf2 netfilter-persistent[21975]: run-parts: executing
/usr/share/netfilter-persistent/plugins.d/15-ip4tables start
May 13 11:55:43 inf2 netfilter-persistent[21975]: run-parts: executing
/usr/share/netfilter-persistent/plugins.d/25-ip6tables start
May 13 11:55:43 inf2 systemd[1]: Started netfilter persistent configuration.

Not sure if this is really a problem or not, but it looks like one.

Regards,
Vedran Miletić


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Bug#726910: LDC 0.11.0 is available

2013-10-20 Thread Vedran Miletić
Package: ldc
Version: 0.9.1+hg1634-1

Version 0.11.0 of this popular compiler has been released back in June
[1]. It would be nice if Debian package could be updated.

Regards,
Vedran Miletić

[1] 
http://forum.dlang.org/thread/mailman.990.1370788529.13711.digitalmars-d-...@puremagic.com


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Bug#725649: nvcc fatal : Path to libdevice library not specified

2013-10-06 Thread Vedran Miletić
Package:nvidia-cuda-toolkit
Version: 5.5.22-1

Running any example with PyCUDA results in:

% python hello_gpu.py
Traceback (most recent call last):
  File hello_gpu.py, line 12, in module
mod = SourceModule(open(hello_gpu.cu).read())
  File /usr/lib/python2.7/dist-packages/pycuda/compiler.py, line
262, in __init__
arch, code, cache_dir, include_dirs)
  File /usr/lib/python2.7/dist-packages/pycuda/compiler.py, line
252, in compile
return compile_plain(source, options, keep, nvcc, cache_dir)
  File /usr/lib/python2.7/dist-packages/pycuda/compiler.py, line
134, in compile_plain
cmdline, stdout=stdout.decode(utf-8), stderr=stderr.decode(utf-8))
pycuda.driver.CompileError: nvcc compilation of /tmp/tmpDX0YZu/kernel.cu failed
[command: nvcc --cubin -arch sm_21
-I/usr/lib/python2.7/dist-packages/pycuda/cuda kernel.cu]
[stderr:
nvcc fatal   : Path to libdevice library not specified
]

nvidia-cuda toolkit 5.0.35-7 works fine. I'm not sure if this is on
PyCUDA or nvidia-cuda-toolkit's side. Apologies in advance if it's
PyCUDA.

Regards,
Vedran


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Bug#656903: Status update

2013-09-23 Thread Vedran Miletić
Hi Karol and all,

glad to see Desurium is being packaged for Debian. I see a lot of
activity on GitHub. Have there been more updates since may?

Regards,
Vedran


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Bug#681726: Kepler 4.3 is out

2013-07-22 Thread Vedran Miletić
Hi,

is there any progress or plan regarding the switch to e4?

Regards,
Vedran


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Bug#714364: New upstream version 8.0.0

2013-06-28 Thread Vedran Miletić
Package: condor
Version: 7.8.2~dfsg.1-1+deb7u1+b1

HTCondor 8.0.0 is available. If it's possible, it would be nice to
have it updated in Debian.

Regards,
Vedran


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Bug#705262: Ceph Downloads

2013-06-12 Thread Vedran Miletić
Packages of Ceph 0.61 for wheezy are provided at
http://ceph.com/resources/downloads/

It would be nice to have them back in Debian archive as well.

Regards,
Vedran Miletić


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Bug#705418: clang++ fails to find stdarg.h include (and probably others)

2013-06-07 Thread Vedran Miletić
Hi Jan,

thanks, it seems to work now with 1:3.3~+rc3-1~exp1 and GCC from experimental.

Regards,
Vedran

2013/5/30 Vedran Miletić riva...@gmail.com:
 2013/5/30 Sylvestre Ledru sylves...@debian.org:
 No. I need a single C/C++ file and the clang command line.

 $ cat foo.cc
 #include stdarg.h

 int main()
 {
   return 0;
 }

 $ clang++ -o foo foo.cc
 foo.cc:1:10: fatal error: 'stdarg.h' file not found
 #include stdarg.h
  ^
 1 error generated.

 Regards,
 Vedran


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Bug#705418: clang++ fails to find stdarg.h include (and probably others)

2013-05-30 Thread Vedran Miletić
2013/5/14 Sylvestre Ledru sylves...@debian.org:
 Le 14/04/2013 18:51, Vedran Miletić a écrit :
 Package: llvm-toolchain-3.2

 Version: 1:3.2repack-1~exp4
 /usr/bin/../lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/cwchar:45:
 /usr/include/wchar.h:39:11: fatal error: 'stdarg.h' file not found
 # include stdarg.h
   ^
 1 error generated.

 I cannot reproduce your issue.
 With clang 3.2repack-2+b1:
 $ cat foo.cc
 #include stdarg.h
 $  clang++ -c foo.cc

 Works without any issue.

 Sylvestre


No idea why, but I have started also getting these issues when
building ns-3 recent clang-3.4 builds from llvm.org/apt

Could you please try building ns-3.17 [1] yourself? The configuration
line for clang is:

$ CC=/usr/bin/clang CXX=/usr/bin/clang++
CXXFLAGS=-Wno-deprecated ./waf configure --enable-examples
--enable-tests

Again, I don't know why this happens, if it's a bug in ns-3 waf I
wouldn't mind fixing it. Something changed in clang, that's for
certain. The fact is that it worked with clang 3.0, clang 3.2 before
the repack and clang 3.3 and 3.4 svn snapshots until 3 or 4 days ago.

Regards,
Vedran

[1] https://www.nsnam.org/release/ns-allinone-3.17.tar.bz2


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Bug#705418: clang++ fails to find stdarg.h include (and probably others)

2013-05-30 Thread Vedran Miletić
2013/5/30 Sylvestre Ledru sylves...@debian.org:
 On 30/05/2013 17:57, Vedran Miletić wrote:
 2013/5/14 Sylvestre Ledru sylves...@debian.org:
 Le 14/04/2013 18:51, Vedran Miletić a écrit :
 Package: llvm-toolchain-3.2

 Could you please try building ns-3.17 [1] yourself?
 Please provide a test case which shows your issue.

 Thanks,
 Sylvestre


Does

$ wget https://www.nsnam.org/release/ns-allinone-3.17.tar.bz2
$ tar xvf ns-allinone-3.17.tar.bz2
$ cd ns-allinone-3.17/ns-3.17
$ CC=/usr/bin/clang CXX=/usr/bin/clang++
CXXFLAGS=-Wno-deprecated ./waf configure --enable-examples
--enable-tests
$ ./waf build

count as a test case?

Regards,
Vedran


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Bug#705418: clang++ fails to find stdarg.h include (and probably others)

2013-05-30 Thread Vedran Miletić
2013/5/30 Sylvestre Ledru sylves...@debian.org:
 No. I need a single C/C++ file and the clang command line.

$ cat foo.cc
#include stdarg.h

int main()
{
  return 0;
}

$ clang++ -o foo foo.cc
foo.cc:1:10: fatal error: 'stdarg.h' file not found
#include stdarg.h
 ^
1 error generated.

Regards,
Vedran


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Bug#707581: moin should at least suggest python-pygments

2013-05-09 Thread Vedran Miletić
Package: moin
Version: 1.9.5-5

Hi,

Without python-pygments installed I get:

[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] mod_wsgi
(pid=28218): Target WSGI script '/var/www/mywiki/moin.wsgi' cannot be
loaded as Python module.
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] mod_wsgi
(pid=28218): Exception occurred processing WSGI script
'/var/www/mywiki/moin.wsgi'.
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] Traceback (most
recent call last):
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*]   File
/var/www/mywiki/moin.wsgi, line 48, in module
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] application =
make_application(shared=True)
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*]   File
/usr/lib/python2.7/dist-packages/MoinMoin/web/serving.py, line 82,
in make_application
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] from
MoinMoin.wsgiapp import application
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*]   File
/usr/lib/python2.7/dist-packages/MoinMoin/wsgiapp.py, line 14, in
module
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] from
MoinMoin.web.contexts import AllContext, Context, XMLRPCContext
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*]   File
/usr/lib/python2.7/dist-packages/MoinMoin/web/contexts.py, line 16,
in module
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] from MoinMoin
import i18n, error, user, config, wikiutil
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*]   File
/usr/lib/python2.7/dist-packages/MoinMoin/user.py, line 36, in
module
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] from MoinMoin
import config, caching, wikiutil, i18n, events
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*]   File
/usr/lib/python2.7/dist-packages/MoinMoin/wikiutil.py, line 888, in
module
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] import pygments.lexers
[Thu May 09 16:24:35 2013] [error] [client *.*.*.*] ImportError: No
module named pygments.lexers

Can moin at least suggest (better recommend) installing python-pygments?

Regards,
Vedran


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Bug#706450: Please package 1.9.7

2013-04-30 Thread Vedran Miletić
Package: moin

Version: 1.9.5-5

Hello,

please package Moin 1.9.7 if possible, as it contains fixes for
numerous security issues.

Regards,
Vedran


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Bug#706450: Please package 1.9.7

2013-04-30 Thread Vedran Miletić
Perfect, thank you.

Regards,
Vedran

2013/4/30 Steve McIntyre st...@einval.com:
 Control: severity -1 wishlist

 On Tue, Apr 30, 2013 at 01:09:43PM +0200, Vedran Miletić wrote:
Package: moin

Version: 1.9.5-5

Hello,

please package Moin 1.9.7 if possible, as it contains fixes for
numerous security issues.

 All of the important fixes are already backported and included in the
 Debian packages, but yes - I'm hoping to get moin 1.9.7 uploaded soon.

 --
 Steve McIntyre, Cambridge, UK.st...@einval.com
 I've only once written 'SQL is my bitch' in a comment. But that code
  is in use on a military site... -- Simon Booth



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Bug#705418: clang++ fails to find stdarg.h include (and probably others)

2013-04-14 Thread Vedran Miletić
Package: llvm-toolchain-3.2

Version: 1:3.2repack-1~exp4

Hi,

when compiling ns-3-dev [1] using clang 1:3.2repack-1~exp4 I get the error:

 682/1868] cxx: examples/tutorial/fifth.cc -
build/examples/tutorial/fifth.cc.6.o
[ 683/1868] cxx: examples/tutorial/sixth.cc -
build/examples/tutorial/sixth.cc.7.o
[ 684/1868] cxx: examples/wireless/mixed-wireless.cc -
build/examples/wireless/mixed-wireless.cc.1.o
In file included from ../examples/tutorial/hello-simulator.cc:17:
In file included from ./ns3/core-module.h:10:
In file included from ./ns3/abort.h:24:
In file included from ./ns3/fatal-error.h:24:
In file included from
/usr/bin/../lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/iostream:39:
In file included from
/usr/bin/../lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/ostream:39:
In file included from
/usr/bin/../lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/ios:38:
In file included from
/usr/bin/../lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/iosfwd:41:
In file included from
/usr/bin/../lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/bits/postypes.h:41:
In file included from
/usr/bin/../lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/cwchar:45:
/usr/include/wchar.h:39:11: fatal error: 'stdarg.h' file not found
# include stdarg.h
  ^
1 error generated.

Configuration also doesn't complete at the step:

Checking for boost linkage:

This used to work in previous version of clang (it was 3.2-5 if I
recall correctly).

Regards,
Vedran

[1] http://code.nsnam.org/ns-3-dev


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Bug#704117: Please upload 2.7 to experimental

2013-03-28 Thread Vedran Miletić
Package: tortoisehg
Version: 2.6-1

Mercurial 2.5+, recently uploaded to unstable, requires TortoiseHg 2.7 or newer.

Please upload TortoiseHg 2.7.1 or newer to experimental.


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Bug#691923: New upstream (1.8.2)

2013-03-28 Thread Vedran Miletić
Hi,

since 1.8.2 is now available, and 1.8.2-rc3 is in experimental, can
this bug be closed and perhaps 1.8.2 final be uploaded?

Regards,
Vedran


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Bug#673606: +1

2012-12-28 Thread Vedran Miletić
NetBeans 7.3 will soon be out. Is there anything we can do to help
with getting it at least into experimental?

Regards,
Vedran


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Bug#694307: Please allow using mpi4py with MPICH2

2012-11-25 Thread Vedran Miletić
Package: mpi4py
Version: 1.3+hg20120611-1

Presently mpi4py assumes Open MPI as MPI implentation.

Please allow using MPICH2 as well, as most packaged software in Debian does.


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Bug#673992: closed by Tomasz Rybak bogom...@post.pl (Bug#673992: fixed in pyopencl 2011.2+git20120517-1)

2012-06-11 Thread Vedran Miletić
Hi Tomasz,

thanks for the fixes you made.

ocl-icd has entered sid. Does this mean python-pyopencl will start to
depend on it instead of amd-opencl-icd?

Vedran



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Bug#673992: python-pyopencl: explicitely requires installation of amd-libopencl1

2012-06-05 Thread Vedran Miletić
2012/6/4 Tomasz Rybak bogom...@post.pl:
 I have done some testing and I also get segmentation fault on some
 OpenCL kernels. I haven't got segfault on your sample program.
 I have been running PyOpenCL unit tests and:
 1. test_clmath.py runs without any segfault
 2. test_array.py runs without any segfault
 3. test_wrapper.py segfaults in test_get_info (in cl.Image) and test_image2d 
 (in
 cl.image_from_array).

 Initially I have suspected older amd-libopencl1 version (fglrx 12-4
 does not work with X.org 12), but problem remains after updating
 to 12-6-beta and rebuilding PyOpenCL. I have tested on 295.53
 on NVIDIA ION. It looks like in some cases (not all) NVIDIA OpenCL
 segfaults when run using AMD OpenCL management library.

 I have tested with ocl-icd, which it ITPd by Vincent Danjean,
 but there are some problems with compilation.
 I do not know yet how to solve it, but shall let you know
 when there is some solution.

 Regards.

 --
 Tomasz Rybak bogom...@post.pl GPG/PGP key ID: 2AD5 9860
 Fingerprint A481 824E 7DD3 9C0E C40A  488E C654 FB33 2AD5 9860
 http://member.acm.org/~tomaszrybak


Thanks for your effort.

I also get segfault on this: http://documen.tician.de/pyopencl/

I have this:

01:00.0 VGA compatible controller [0300]: NVIDIA Corporation GF114
[GeForce GTX 560 Ti] [10de:1200] (rev a1) (prog-if 00 [VGA
controller])
Subsystem: ZOTAC International (MCO) Ltd. Device [19da:1665]
Flags: bus master, fast devsel, latency 0, IRQ 24
Memory at fc00 (32-bit, non-prefetchable) [size=32M]
Memory at d000 (64-bit, prefetchable) [size=128M]
Memory at d800 (64-bit, prefetchable) [size=64M]
I/O ports at e000 [size=128]
[virtual] Expansion ROM at fe00 [disabled] [size=512K]
Capabilities: access denied
Kernel driver in use: nvidia

If I understand the idea behind ocl-icd, this will be great once it's done.

Vedran



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Bug#673992: python-pyopencl: explicitely requires installation of amd-libopencl1

2012-06-01 Thread Vedran Miletić
2012/5/22 Tomasz Rybak tomasz.ry...@post.pl:
 Dnia 2012-05-22, wto o godzinie 14:14 +0200, Vedran Miletic pisze:
 Package: python-pyopencl
 Version: 2011.2+git20120508-1
 Severity: important

 Dear Maintainer,

 since 2011.2+git20120508-1, python-pyopencl depends on amd-libopencl1, which
 conflicts with nvidia-libopencl1. This effectively makes it unusable for
 people using it on NVIDIA cards.

 I'm sure there is a good reason for the requirement, but could it be relaxed
 somehow? It already requires one or the other by virtual dependancy.

 For more detailed explanation see NEWS from python-pyopencl.
 In summary - Debian now contains opencl-headers 1.2.
 NVIDIA's OpenCL supports only OpenCL 1.1 - which means that package was
 being built successfully but failed to run any code, failing to find
 OpenCL 1.2 functions.
 OTOH AMD library provides OpenCL 1.2 and works well with NVIDIA GPUs.
 AMD deals with managing OpenCL, and forwards all calls to NVIDIA
 implementation - hence hard dependency on amd-libopencl1.

 I shall add another entry in NEWS file to describe this situation and
 relieve worries of users of PyOpenCL. Any insight what would be
 the best description from user point of view? I do not want to go
 into details and bore with my description.

 Of course if you experience some crashes with PyOpenCL running on Debian
 please let me know. I have tested this combination (NVIDIA+AMD OpenCL
 libraries) on both unstable and experimental drivers and have not had
 any troubles, but maybe I just got lucky ;-)

 Andreas - I know this is my bug, but maybe it would be good idea to add
 some description to OpenCL-related packages? I can write some draft
 (but no earlier than middle of next week - I am busy with fixing
 PyCUDA) to describe situation with libOpenCL and ICD stuff?

 Best regards.

 --
 Tomasz Rybak  GPG/PGP key ID: 2AD5 9860
 Fingerprint A481 824E 7DD3 9C0E C40A  488E C654 FB33 2AD5 9860
 http://member.acm.org/~tomaszrybak


Hi Tomasz,

I followed your instructions, and I'm experiencing Segmentation fault
with pyopencl on
http://enja.org/2011/02/22/adventures-in-pyopencl-part-1-getting-started-with-python/index.html

$ python main.py
__kernel void part1(__global float* a, __global float* b, __global float* c)
{
unsigned int i = get_global_id(0);

c[i] = a[i] + b[i];
}

Segmentation fault

Any suggestions?

Vedran Miletić



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Bug#578437: New upstream release 1.0.4 available

2012-05-22 Thread Vedran Miletić
Hi Amos, any update on this?



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Bug#571679: [tex-live] moving ucs back to -recommended

2010-03-10 Thread Vedran Miletić
2010/3/10 Norbert Preining prein...@logic.at:
 Hi everyone,

 From a Debian bug report:

 - Forwarded message from Decklin Foster deck...@red-bean.com -
 Somewhere between Lenny and now, ucs.sty was moved from -recommended
 to -extra. As UTF-8 support is (I believe) a release goal, I would
 - End forwarded message -

 I somehow agree that making inputting utf8 with -recommended would be
 a nice thing. I don't want to dig through the dependencies now, but
 are there any specific reasons why we moved ucs package to latexextra?

Aside from already mentioned things, ucs also breaks pdf title, author
and keywords. It gets stuff like
[Pleaseinsert\〰ぐrerenderUnicode{Ž}intopreamble] for every non-ASCII
character.

I would keep it in extra.

Regards,

-- 
Vedran Miletić



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Bug#413809: TeX Live 2007 available

2007-03-07 Thread Vedran Miletić

2007/3/7, Anders [EMAIL PROTECTED]:

Package: texlive
Version: 2005.dfsg.3-1
Severity: wishlist

A whishlist bug: what is the status concerning moving from TeXLive
2005 to TeXLive 2007 in Debian unstable?



Norbert uploaded packages here some time ago:
  deb http://www.tug.org/texlive/Debian/ tl2007/
  deb-src http://www.tug.org/texlive/Debian/ tl2007/
They will be moved to exprerimental at some point, but they will not
be moved to unstable until etch is released, because etch will
certainly ship with TL2005.


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