Bug#1021676: r-cran-leidenbase: autopkgtest failure on several architectures

2022-10-13 Thread Andreas Tille 
Control: tags -1 upstream
Control: forwarded -1 https://github.com/cole-trapnell-lab/leidenbase/issues/36

Hi Adrian,

thanks a lot for this bug report

Am Wed, Oct 12, 2022 at 09:59:05PM +0300 schrieb Adrian Bunk:
> Source: r-cran-leidenbase
> Version: 0.1.12-1
> Severity: serious
> Control: block 1019706 by -1
> 
> https://ci.debian.net/data/autopkgtest/testing/arm64/r/r-cran-leidenbase/26869942/log.gz

I was stumbling upon this yesterday as well and have reported it
upstream[1] (even before this bug was filed ;-) - I should have opened
an according bug, sorry for missing this).

Please note that the issue is even worse on i386 (the other failing
architectures are all affected by the same problem).  I hope upstream
will find a quick solution for what looks like a rounding error issue at
first sight but may be it has a deeper cause.

Kind regards

  Andreas.

[1] https://github.com/cole-trapnell-lab/leidenbase/issues/36

-- 
http://fam-tille.de

Bug#1021676: r-cran-leidenbase: autopkgtest failure on several architectures

2022-10-12 Thread Adrian Bunk 
Source: r-cran-leidenbase
Version: 0.1.12-1
Severity: serious
Control: block 1019706 by -1

https://ci.debian.net/data/autopkgtest/testing/arm64/r/r-cran-leidenbase/26869942/log.gz

...
BEGIN TEST testthat.R

R version 4.2.1 (2022-06-23) -- "Funny-Looking Kid"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> testthat::test_check("leidenbase")
Loading required package: leidenbase
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 27 ]

══ Failed tests 
── Failure (test-leidenbase.R:253:5): modularity and significance return values 
──
`t11_v01` not equal to `t11_v01_expect`.
1/1 mismatches
[1] 0.71 - 0.71 == 0.000133

[ FAIL 1 | WARN 0 | SKIP 0 | PASS 27 ]
Error: Test failures
Execution halted
autopkgtest [23:40:06]: test run-unit-test: ---]
autopkgtest [23:40:06]: test run-unit-test:  - - - - - - - - - - results - - - 
- - - - - - -
run-unit-testFAIL non-zero exit status 1
...