Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
Dear all, I took some time to look at the code, but I not really know what to do. The Fortran program concerns the SQP algorithm written not by myself but with extension added by me. I had also some problems to run it for the Mac and under Windows with the Mingw gfortran/gf77 compilers but I think these were (hopefully) solved. I have not more time to spend on the (old) m68k, and I hope we can live with it. Sorry, and many thanks Diethelm Prof Brian Ripley wrote: On Thu, 9 Mar 2006, Dirk Eddelbuettel wrote: Diethelm, Any comment from your end? -- The code only fails on m68k (which has historically had an above-average share of troubles with Fortran). -- The previous fSeries released passed so it may be the new Garch code in file 034B-GarchModelling.f Yes, from the log g77 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o 034B-GarchModelling.f: In subroutine `pc1f01': In file included from 034B-GarchModelling.f:0: 034B-GarchModelling.f:2628: internal compiler error: in verify_initial_elim_offsets, at reload1.c:3297 Please submit a full bug report, It's a compiler bug, and suggests sending a compiler bug report. On such a minority platform (I last used m68k in the 1980s) and with an end-of-line gcc version I can see you might not want to do so. Generally g77 is still more reliable than gfortran at building R packages, but with 4.0.2 and 4.1.0 the gap has closed a lot. I will probably migrate to 4.1.0 on Linux/Solaris shortly (MinGW is another story). -- According to Stephen, gfortran 4.0 compiles it fine so maybe once I turn from gcc/g77 3.4 to gcc/gfortran 4.0 (and soon 4.1) the problems will go away by itself. I will also CC Brian as he probably has the best understanding of the interactions between R and the various gcc releases. Regards, Dirk On 9 March 2006 at 13:21, Stephen R Marenka wrote: | Package: fseries | Version: 221.10065-1 | Severity: important | | | fseries fails to build from source due to a gcc-3.4 ICE on m68k. For | what it's worth, I built the package with gfortran-4.0 and it built fine. | | I'm not sure of the other implications involved with a change of | compiler. | | You are welcomed to do whatever you want to with this bug report. :) | | Here are selected excerpts from the buildd log. | | | | Automatic build of fseries_221.10065-1 on spice by sbuild/m68k 85 | | Build started at 20060221-2154 | | ** | | [...] | | | ** Using build dependencies supplied by package: | | Build-Depends: debhelper ( 4.1.0), r-base-dev (= 2.0.0), cdbs, r-cran-fbasics (= 201.10059), r-cran-fcalendar, r-cran-mgcv (= 1.1.5), r-cran-vr (= 7.2.8) | | [...] | | | Checking correctness of source dependencies... | | Toolchain package versions: libc6-dev_2.3.5-12 linux-kernel-headers_2.6.13+0rc3-2 gcc-4.0_4.0.2-8 g++-4.0_4.0.2-8 binutils_2.16.1cvs20060117-1 libstdc++6-4.0-dev_4.0.2-8 libstdc++6_4.0.2-8 | | [...] | | | g77 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o | | 034B-GarchModelling.f: In subroutine `pc1f01': | | In file included from 034B-GarchModelling.f:0: | | 034B-GarchModelling.f:2628: internal compiler error: in verify_initial_elim_offsets, at reload1.c:3297 | | Please submit a full bug report, | | with preprocessed source if appropriate. | | See URL:http://gcc.gnu.org/bugs.html for instructions. | | For Debian GNU/Linux specific bug reporting instructions, | | see URL:file:///usr/share/doc/gcc-3.4/README.Bugs. | | make[1]: *** [034B-GarchModelling.o] Error 1 | | make[1]: Leaving directory `/build/buildd/fseries-221.10065/src' | | ERROR: compilation failed for package 'fSeries' | | ** Removing '/build/buildd/fseries-221.10065/debian/r-cran-fseries/usr/lib/R/site-library/fSeries' | | make: *** [R_any_arch] Error 1 | | ** | | Build finished at 20060221-2216 | | FAILED [dpkg-buildpackage died] | | | A full buildd log is available at | http://buildd.debian.org/build.php?pkg=fseriesver=221.10065-1arch=m68k | | Other buildd logs may be available at | http://buildd.debian.org/build.php?arch=pkg=fseries | | -- | Stephen R. Marenka If life's not fun, you're not doing it right! | [EMAIL PROTECTED] | -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On 16 March 2006 at 08:46, Diethelm Wuertz wrote: | Dear all, | | I took some time to look at the code, but I not really know what to do. | The Fortran | program concerns the SQP algorithm written not by myself but with extension | added by me. I had also some problems to run it for the Mac and under | Windows with the Mingw gfortran/gf77 compilers but I think these were | (hopefully) | solved. | | I have not more time to spend on the (old) m68k, and I hope we can live | with it. | Sorry, and many thanks Yes, we concluded that it's probably most gcc's fault as Fortran support really sucks on some architectures (on which no sane person would run numerically challenging code -- arm, m68k and the like which is why this will probably never get much better than it is). Reducing optimisation one level to -O1 fixes the issue as Stephen confirmed. That's a fair compromise as we can't and wouldn't expect you to rewrite this is a modern language Cheers, Dirk -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On Sat, Mar 11, 2006 at 10:16:22PM -0600, Dirk Eddelbuettel wrote: Try this, please: Ends up with the following command line, which fails. | g77 -w -O0 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o BTW: I'm uploading the package I built with 034B-GarchModelling.f compiled with -O1 by hand. I'll leave my test stuff in place if you want me to try some other patches. -- Stephen R. Marenka If life's not fun, you're not doing it right! [EMAIL PROTECTED] signature.asc Description: Digital signature
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On 13 March 2006 at 07:50, Stephen R Marenka wrote: | On Sat, Mar 11, 2006 at 10:16:22PM -0600, Dirk Eddelbuettel wrote: | | Try this, please: | | Ends up with the following command line, which fails. | | | g77 -w -O0 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o I was afraid of that. I noticed in my tests that PKG_FFLAGS gets added to the existing hard-coded flags from /etc/R/Makeconf. There must be a way to override them, but I haven't found it. Will talk to to upstream. Actually, before CCing upstream I just googled and found eg this from the R-devel list http://tolstoy.newcastle.edu.au/R/devel/05/02/2173.html so you could try the 'if m68k' line in debian/rules to start as MAKEFLAGS=CFLAGS=-O1 R CMD INSTALL where is everything we currently have behind INSTALL. | BTW: I'm uploading the package I built with 034B-GarchModelling.f | compiled with -O1 by hand. I'll leave my test stuff in place if you want | me to try some other patches. Super, thanks. I really appreciate the manual help! Cheers, Dirk -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On 13 March 2006 at 09:02, Stephen R Marenka wrote: | On Mon, Mar 13, 2006 at 08:23:34AM -0600, Dirk Eddelbuettel wrote: | | so you could try the 'if m68k' line in debian/rules to start as | MAKEFLAGS=CFLAGS=-O1 R CMD INSTALL | where is everything we currently have behind INSTALL. | | If you mean: | | MAKEFLAGS=CFLAGS=-O1 R CMD INSTALL -l $(debRlib) --clean . | | then you get | | g77 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o Apologies, I did of course mean to write in terms of FFLAGS, not CFLAGS. Could you try MAKEFLAGS=FFLAGS=-O1 R CMD INSTALL -l $(debRlib) --clean . Thanks, Dirk -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On Mon, Mar 13, 2006 at 08:23:34AM -0600, Dirk Eddelbuettel wrote: so you could try the 'if m68k' line in debian/rules to start as MAKEFLAGS=CFLAGS=-O1 R CMD INSTALL where is everything we currently have behind INSTALL. If you mean: | MAKEFLAGS=CFLAGS=-O1 R CMD INSTALL -l $(debRlib) --clean . then you get | g77 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o -- Stephen R. Marenka If life's not fun, you're not doing it right! [EMAIL PROTECTED] signature.asc Description: Digital signature
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
Ok, I tested the debian/rules and it works. One thing I have figured out is how to pass more than one argument to FFLAGS which seems to fail -- I am probably running into some issues with quoting. Dirk #!/usr/bin/make -f # -*- makefile -*- # debian/rules file for the Debian/GNU Linux r-cran-fseries package # Copyright 2003-2006 by Dirk Eddelbuettel [EMAIL PROTECTED] include /usr/share/cdbs/1/rules/debhelper.mk include /usr/share/cdbs/1/class/langcore.mk # package name, also forced lower case cranName:= $(shell grep Package: DESCRIPTION | cut -f2 -d ) cranNameLC := $(shell echo $(cranName) | tr [A-Z] [a-z] ) ## which we can use to build the package directory package := r-cran-$(cranNameLC) ## which we use for the to-be-installed-in directory debRlib :=$(CURDIR)/debian/$(package)/usr/lib/R/site-library ## edd 11 Mar 2006 need to special for m68k and its Fortran compiler arch:= $(shell dpkg-architecture -qDEB_BUILD_GNU_CPU) common-install-indep:: R_any_arch common-install-arch:: R_any_arch R_any_arch: dh_installdirs usr/lib/R/site-library ifeq ($(arch),m68k) MAKEFLAGS=FFLAGS=-O1 R CMD INSTALL -l $(debRlib) --clean . else R CMD INSTALL -l $(debRlib) --clean . endif rm -vf $(debRlib)/R.css $(debRlib)/*/COPYING -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On Mon, Mar 13, 2006 at 10:47:13AM -0600, Dirk Eddelbuettel wrote: Ok, I tested the debian/rules and it works. One thing I have figured out is how to pass more than one argument to FFLAGS which seems to fail -- I am probably running into some issues with quoting. This one works fine. -- Stephen R. Marenka If life's not fun, you're not doing it right! [EMAIL PROTECTED] signature.asc Description: Digital signature
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
| On Mon, Mar 13, 2006 at 10:47:13AM -0600, Dirk Eddelbuettel wrote: | | Ok, I tested the debian/rules and it works. One thing I have figured out is | how to pass more than one argument to FFLAGS which seems to fail -- I am | probably running into some issues with quoting. | | This one works fine. Thanks for confirming, and of course your upload. We'll go with this now tested and confirmed debian/rules as per the next revision; I'll mark the bug pending. Ok? Thanks again, Dirk -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On Mon, Mar 13, 2006 at 02:37:08PM -0600, Dirk Eddelbuettel wrote: Thanks for confirming, and of course your upload. We'll go with this now tested and confirmed debian/rules as per the next revision; I'll mark the bug pending. Ok? Works for me. -- Stephen R. Marenka If life's not fun, you're not doing it right! [EMAIL PROTECTED] signature.asc Description: Digital signature
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On Fri, Mar 10, 2006 at 08:31:31AM -0600, Dirk Eddelbuettel wrote: Great! We have a long and shameful history of suppressing optimisation on arm and m68k to enable complete compilation, so I will go back to -O1 for m68k. Could you possibly push a manual build of the package? I don't really want to force it through all the builders given that it just built everywhere else and the only change would be conditional on m68k anyway. Sure, I'll get it built forthwith. At least the good news is we might survive the jump to gfortran-4.0. :) Thanks, Stephen -- Stephen R. Marenka If life's not fun, you're not doing it right! [EMAIL PROTECTED] signature.asc Description: Digital signature
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
(Diethelm and Brian trimmed) On 11 March 2006 at 20:59, Stephen R Marenka wrote: | On Fri, Mar 10, 2006 at 08:31:31AM -0600, Dirk Eddelbuettel wrote: | | Great! We have a long and shameful history of suppressing optimisation on | arm and m68k to enable complete compilation, so I will go back to -O1 for | m68k. Could you possibly push a manual build of the package? I don't really | want to force it through all the builders given that it just built everywhere | else and the only change would be conditional on m68k anyway. | | Sure, I'll get it built forthwith. At least the good news is we might | survive the jump to gfortran-4.0. :) Cool, thanks. As you'll see the debian/rules is the usual super-short stanza based on cdbs. I am not yet sure how best to tell to set -O1 (or even -O0). I guess DEB_BUILD_OPTIONS=noopt would do, no? (Conditional of m68k, of course). Even then langcore.mk only sets CFLAGS and CXXFLAGS :-/ Thoughts? Dirk -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On 11 March 2006 at 21:37, Dirk Eddelbuettel wrote: | | (Diethelm and Brian trimmed) | | On 11 March 2006 at 20:59, Stephen R Marenka wrote: | | On Fri, Mar 10, 2006 at 08:31:31AM -0600, Dirk Eddelbuettel wrote: | | | | Great! We have a long and shameful history of suppressing optimisation on | | arm and m68k to enable complete compilation, so I will go back to -O1 for | | m68k. Could you possibly push a manual build of the package? I don't really | | want to force it through all the builders given that it just built everywhere | | else and the only change would be conditional on m68k anyway. | | | | Sure, I'll get it built forthwith. At least the good news is we might | | survive the jump to gfortran-4.0. :) | | Cool, thanks. | | As you'll see the debian/rules is the usual super-short stanza based on | cdbs. I am not yet sure how best to tell to set -O1 (or even -O0). | | I guess | DEB_BUILD_OPTIONS=noopt | would do, no? (Conditional of m68k, of course). | | Even then langcore.mk only sets CFLAGS and CXXFLAGS :-/ | | Thoughts? Got it. R listens to its own PKG_FFLAGS, so prepending the R CMD INSTALL does it : PKG_FFLAGS=-w -O0 R CMD INSTALL -l $(debRlib) --clean . which even activates the unused-as-set-in-FLAGS-instead-of-PKG_FFLAGS switch -w from src/Makevars :) Now we only need to wrap this in a test for m68k. Give me another minutes or two. Dirk -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
Try this, please: - #!/usr/bin/make -f # -*- makefile -*- # debian/rules file for the Debian/GNU Linux r-cran-fseries package # Copyright 2003-2006 by Dirk Eddelbuettel [EMAIL PROTECTED] include /usr/share/cdbs/1/rules/debhelper.mk include /usr/share/cdbs/1/class/langcore.mk # package name, also forced lower case cranName:= $(shell grep Package: DESCRIPTION | cut -f2 -d ) cranNameLC := $(shell echo $(cranName) | tr [A-Z] [a-z] ) ## which we can use to build the package directory package := r-cran-$(cranNameLC) ## which we use for the to-be-installed-in directory debRlib :=$(CURDIR)/debian/$(package)/usr/lib/R/site-library ## edd 11 Mar 2006 need to special for m68k and its Fortran compiler arch:= $(shell dpkg-architecture -qDEB_BUILD_GNU_CPU) common-install-indep:: R_any_arch common-install-arch:: R_any_arch R_any_arch: dh_installdirs usr/lib/R/site-library ifeq ($(arch),m68k) PKG_FFLAGS=-w -O0 R CMD INSTALL -l $(debRlib) --clean . else R CMD INSTALL -l $(debRlib) --clean . endif rm -vf $(debRlib)/R.css $(debRlib)/*/COPYING - Dirk -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On Thu, 9 Mar 2006, Dirk Eddelbuettel wrote: Diethelm, Any comment from your end? -- The code only fails on m68k (which has historically had an above-average share of troubles with Fortran). -- The previous fSeries released passed so it may be the new Garch code in file 034B-GarchModelling.f Yes, from the log g77 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o 034B-GarchModelling.f: In subroutine `pc1f01': In file included from 034B-GarchModelling.f:0: 034B-GarchModelling.f:2628: internal compiler error: in verify_initial_elim_offsets, at reload1.c:3297 Please submit a full bug report, It's a compiler bug, and suggests sending a compiler bug report. On such a minority platform (I last used m68k in the 1980s) and with an end-of-line gcc version I can see you might not want to do so. Generally g77 is still more reliable than gfortran at building R packages, but with 4.0.2 and 4.1.0 the gap has closed a lot. I will probably migrate to 4.1.0 on Linux/Solaris shortly (MinGW is another story). -- According to Stephen, gfortran 4.0 compiles it fine so maybe once I turn from gcc/g77 3.4 to gcc/gfortran 4.0 (and soon 4.1) the problems will go away by itself. I will also CC Brian as he probably has the best understanding of the interactions between R and the various gcc releases. Regards, Dirk On 9 March 2006 at 13:21, Stephen R Marenka wrote: | Package: fseries | Version: 221.10065-1 | Severity: important | | | fseries fails to build from source due to a gcc-3.4 ICE on m68k. For | what it's worth, I built the package with gfortran-4.0 and it built fine. | | I'm not sure of the other implications involved with a change of | compiler. | | You are welcomed to do whatever you want to with this bug report. :) | | Here are selected excerpts from the buildd log. | | | | Automatic build of fseries_221.10065-1 on spice by sbuild/m68k 85 | | Build started at 20060221-2154 | | ** | | [...] | | | ** Using build dependencies supplied by package: | | Build-Depends: debhelper ( 4.1.0), r-base-dev (= 2.0.0), cdbs, r-cran-fbasics (= 201.10059), r-cran-fcalendar, r-cran-mgcv (= 1.1.5), r-cran-vr (= 7.2.8) | | [...] | | | Checking correctness of source dependencies... | | Toolchain package versions: libc6-dev_2.3.5-12 linux-kernel-headers_2.6.13+0rc3-2 gcc-4.0_4.0.2-8 g++-4.0_4.0.2-8 binutils_2.16.1cvs20060117-1 libstdc++6-4.0-dev_4.0.2-8 libstdc++6_4.0.2-8 | | [...] | | | g77 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o | | 034B-GarchModelling.f: In subroutine `pc1f01': | | In file included from 034B-GarchModelling.f:0: | | 034B-GarchModelling.f:2628: internal compiler error: in verify_initial_elim_offsets, at reload1.c:3297 | | Please submit a full bug report, | | with preprocessed source if appropriate. | | See URL:http://gcc.gnu.org/bugs.html for instructions. | | For Debian GNU/Linux specific bug reporting instructions, | | see URL:file:///usr/share/doc/gcc-3.4/README.Bugs. | | make[1]: *** [034B-GarchModelling.o] Error 1 | | make[1]: Leaving directory `/build/buildd/fseries-221.10065/src' | | ERROR: compilation failed for package 'fSeries' | | ** Removing '/build/buildd/fseries-221.10065/debian/r-cran-fseries/usr/lib/R/site-library/fSeries' | | make: *** [R_any_arch] Error 1 | | ** | | Build finished at 20060221-2216 | | FAILED [dpkg-buildpackage died] | | | A full buildd log is available at | http://buildd.debian.org/build.php?pkg=fseriesver=221.10065-1arch=m68k | | Other buildd logs may be available at | http://buildd.debian.org/build.php?arch=pkg=fseries | | -- | Stephen R. Marenka If life's not fun, you're not doing it right! | [EMAIL PROTECTED] | -- Brian D. Ripley, [EMAIL PROTECTED] Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UKFax: +44 1865 272595 -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
On Thu, Mar 09, 2006 at 03:19:13PM -0600, Dirk Eddelbuettel wrote: As a general rule, I can expect to successfully mix code from gcc 3.4 and 4.0, right? In which case, could I create a -2 upload with gcc/gfortran 4.0 even though the rest of R and the couple dozen R-dependent packages are all built with 3.4? I had not yet enforced gcc 4.* for R. | I'm not sure of the other implications involved with a change of | compiler. I wish I could tell you the right answer. It seems like the point of gcc-3.4 and gcc-4.0 was to make migration easier. If you do 'apt-cache rdepends r-base-core' you get an idea. Not all of these packages use compiled code, and even fewer use Fortran. On the other hand, would the ICE go away for this package with less (or no) optimization ? 034B-GarchModelling.f compiles fine with -01. | You are welcomed to do whatever you want to with this bug report. :) Can I tag it 'm68k-only' and make it less than 'important' severity to not hold up all the working arches? It has built everywhere else ... Important won't cause you any problems, but feel free to change the severity and tag it anyway you'd like. -- Stephen R. Marenka If life's not fun, you're not doing it right! [EMAIL PROTECTED] signature.asc Description: Digital signature
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
(Re-added CCs for Diethelm and Brian as heads-ups) On 10 March 2006 at 08:02, Stephen R Marenka wrote: | On Thu, Mar 09, 2006 at 03:19:13PM -0600, Dirk Eddelbuettel wrote: | | As a general rule, I can expect to successfully mix code from gcc 3.4 and | 4.0, right? | | In which case, could I create a -2 upload with gcc/gfortran 4.0 even though | the rest of R and the couple dozen R-dependent packages are all built with | 3.4? I had not yet enforced gcc 4.* for R. | | | I'm not sure of the other implications involved with a change of | | compiler. | | I wish I could tell you the right answer. It seems like the point of | gcc-3.4 and gcc-4.0 was to make migration easier. That was my understanding too. | If you do 'apt-cache rdepends r-base-core' you get an idea. Not all of these | packages use compiled code, and even fewer use Fortran. | | On the other hand, would the ICE go away for this package with less (or no) | optimization ? | | 034B-GarchModelling.f compiles fine with -01. Great! We have a long and shameful history of suppressing optimisation on arm and m68k to enable complete compilation, so I will go back to -O1 for m68k. Could you possibly push a manual build of the package? I don't really want to force it through all the builders given that it just built everywhere else and the only change would be conditional on m68k anyway. Thanks for your help! Dirk | | You are welcomed to do whatever you want to with this bug report. :) | | Can I tag it 'm68k-only' and make it less than 'important' severity to not | hold up all the working arches? It has built everywhere else ... | | Important won't cause you any problems, but feel free to change the | severity and tag it anyway you'd like. | | -- | Stephen R. Marenka If life's not fun, you're not doing it right! | [EMAIL PROTECTED] -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
Package: fseries Version: 221.10065-1 Severity: important fseries fails to build from source due to a gcc-3.4 ICE on m68k. For what it's worth, I built the package with gfortran-4.0 and it built fine. I'm not sure of the other implications involved with a change of compiler. You are welcomed to do whatever you want to with this bug report. :) Here are selected excerpts from the buildd log. | Automatic build of fseries_221.10065-1 on spice by sbuild/m68k 85 | Build started at 20060221-2154 | ** [...] | ** Using build dependencies supplied by package: | Build-Depends: debhelper ( 4.1.0), r-base-dev (= 2.0.0), cdbs, r-cran-fbasics (= 201.10059), r-cran-fcalendar, r-cran-mgcv (= 1.1.5), r-cran-vr (= 7.2.8) [...] | Checking correctness of source dependencies... | Toolchain package versions: libc6-dev_2.3.5-12 linux-kernel-headers_2.6.13+0rc3-2 gcc-4.0_4.0.2-8 g++-4.0_4.0.2-8 binutils_2.16.1cvs20060117-1 libstdc++6-4.0-dev_4.0.2-8 libstdc++6_4.0.2-8 [...] | g77 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o | 034B-GarchModelling.f: In subroutine `pc1f01': | In file included from 034B-GarchModelling.f:0: | 034B-GarchModelling.f:2628: internal compiler error: in verify_initial_elim_offsets, at reload1.c:3297 | Please submit a full bug report, | with preprocessed source if appropriate. | See URL:http://gcc.gnu.org/bugs.html for instructions. | For Debian GNU/Linux specific bug reporting instructions, | see URL:file:///usr/share/doc/gcc-3.4/README.Bugs. | make[1]: *** [034B-GarchModelling.o] Error 1 | make[1]: Leaving directory `/build/buildd/fseries-221.10065/src' | ERROR: compilation failed for package 'fSeries' | ** Removing '/build/buildd/fseries-221.10065/debian/r-cran-fseries/usr/lib/R/site-library/fSeries' | make: *** [R_any_arch] Error 1 | ** | Build finished at 20060221-2216 | FAILED [dpkg-buildpackage died] A full buildd log is available at http://buildd.debian.org/build.php?pkg=fseriesver=221.10065-1arch=m68k Other buildd logs may be available at http://buildd.debian.org/build.php?arch=pkg=fseries -- Stephen R. Marenka If life's not fun, you're not doing it right! [EMAIL PROTECTED] -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
Hi Stephen, On 9 March 2006 at 13:21, Stephen R Marenka wrote: | Package: fseries | Version: 221.10065-1 | Severity: important | | | fseries fails to build from source due to a gcc-3.4 ICE on m68k. For Ahh, the joys of Fortran on m68k ... :-/ | what it's worth, I built the package with gfortran-4.0 and it built fine. As a general rule, I can expect to successfully mix code from gcc 3.4 and 4.0, right? In which case, could I create a -2 upload with gcc/gfortran 4.0 even though the rest of R and the couple dozen R-dependent packages are all built with 3.4? I had not yet enforced gcc 4.* for R. | I'm not sure of the other implications involved with a change of | compiler. If you do 'apt-cache rdepends r-base-core' you get an idea. Not all of these packages use compiled code, and even fewer use Fortran. On the other hand, would the ICE go away for this package with less (or no) optimization ? | You are welcomed to do whatever you want to with this bug report. :) Can I tag it 'm68k-only' and make it less than 'important' severity to not hold up all the working arches? It has built everywhere else ... Dirk | Here are sected excerpts from the buildd log. | | | | Automatic build of fseries_221.10065-1 on spice by sbuild/m68k 85 | | Build started at 20060221-2154 | | ** | | [...] | | | ** Using build dependencies supplied by package: | | Build-Depends: debhelper ( 4.1.0), r-base-dev (= 2.0.0), cdbs, r-cran-fbasics (= 201.10059), r-cran-fcalendar, r-cran-mgcv (= 1.1.5), r-cran-vr (= 7.2.8) | | [...] | | | Checking correctness of source dependencies... | | Toolchain package versions: libc6-dev_2.3.5-12 linux-kernel-headers_2.6.13+0rc3-2 gcc-4.0_4.0.2-8 g++-4.0_4.0.2-8 binutils_2.16.1cvs20060117-1 libstdc++6-4.0-dev_4.0.2-8 libstdc++6_4.0.2-8 | | [...] | | | g77 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o | | 034B-GarchModelling.f: In subroutine `pc1f01': | | In file included from 034B-GarchModelling.f:0: | | 034B-GarchModelling.f:2628: internal compiler error: in verify_initial_elim_offsets, at reload1.c:3297 | | Please submit a full bug report, | | with preprocessed source if appropriate. | | See URL:http://gcc.gnu.org/bugs.html for instructions. | | For Debian GNU/Linux specific bug reporting instructions, | | see URL:file:///usr/share/doc/gcc-3.4/README.Bugs. | | make[1]: *** [034B-GarchModelling.o] Error 1 | | make[1]: Leaving directory `/build/buildd/fseries-221.10065/src' | | ERROR: compilation failed for package 'fSeries' | | ** Removing '/build/buildd/fseries-221.10065/debian/r-cran-fseries/usr/lib/R/site-library/fSeries' | | make: *** [R_any_arch] Error 1 | | ** | | Build finished at 20060221-2216 | | FAILED [dpkg-buildpackage died] | | | A full buildd log is available at | http://buildd.debian.org/build.php?pkg=fseriesver=221.10065-1arch=m68k | | Other buildd logs may be available at | http://buildd.debian.org/build.php?arch=pkg=fseries | | -- | Stephen R. Marenka If life's not fun, you're not doing it right! | [EMAIL PROTECTED] | -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
Bug#356107: fseries_221.10065-1(m68k/unstable/spice): ftbfs on m68k
Diethelm, Any comment from your end? -- The code only fails on m68k (which has historically had an above-average share of troubles with Fortran). -- The previous fSeries released passed so it may be the new Garch code in file 034B-GarchModelling.f -- According to Stephen, gfortran 4.0 compiles it fine so maybe once I turn from gcc/g77 3.4 to gcc/gfortran 4.0 (and soon 4.1) the problems will go away by itself. I will also CC Brian as he probably has the best understanding of the interactions between R and the various gcc releases. Regards, Dirk On 9 March 2006 at 13:21, Stephen R Marenka wrote: | Package: fseries | Version: 221.10065-1 | Severity: important | | | fseries fails to build from source due to a gcc-3.4 ICE on m68k. For | what it's worth, I built the package with gfortran-4.0 and it built fine. | | I'm not sure of the other implications involved with a change of | compiler. | | You are welcomed to do whatever you want to with this bug report. :) | | Here are selected excerpts from the buildd log. | | | | Automatic build of fseries_221.10065-1 on spice by sbuild/m68k 85 | | Build started at 20060221-2154 | | ** | | [...] | | | ** Using build dependencies supplied by package: | | Build-Depends: debhelper ( 4.1.0), r-base-dev (= 2.0.0), cdbs, r-cran-fbasics (= 201.10059), r-cran-fcalendar, r-cran-mgcv (= 1.1.5), r-cran-vr (= 7.2.8) | | [...] | | | Checking correctness of source dependencies... | | Toolchain package versions: libc6-dev_2.3.5-12 linux-kernel-headers_2.6.13+0rc3-2 gcc-4.0_4.0.2-8 g++-4.0_4.0.2-8 binutils_2.16.1cvs20060117-1 libstdc++6-4.0-dev_4.0.2-8 libstdc++6_4.0.2-8 | | [...] | | | g77 -fPIC -g -O2 -c 034B-GarchModelling.f -o 034B-GarchModelling.o | | 034B-GarchModelling.f: In subroutine `pc1f01': | | In file included from 034B-GarchModelling.f:0: | | 034B-GarchModelling.f:2628: internal compiler error: in verify_initial_elim_offsets, at reload1.c:3297 | | Please submit a full bug report, | | with preprocessed source if appropriate. | | See URL:http://gcc.gnu.org/bugs.html for instructions. | | For Debian GNU/Linux specific bug reporting instructions, | | see URL:file:///usr/share/doc/gcc-3.4/README.Bugs. | | make[1]: *** [034B-GarchModelling.o] Error 1 | | make[1]: Leaving directory `/build/buildd/fseries-221.10065/src' | | ERROR: compilation failed for package 'fSeries' | | ** Removing '/build/buildd/fseries-221.10065/debian/r-cran-fseries/usr/lib/R/site-library/fSeries' | | make: *** [R_any_arch] Error 1 | | ** | | Build finished at 20060221-2216 | | FAILED [dpkg-buildpackage died] | | | A full buildd log is available at | http://buildd.debian.org/build.php?pkg=fseriesver=221.10065-1arch=m68k | | Other buildd logs may be available at | http://buildd.debian.org/build.php?arch=pkg=fseries | | -- | Stephen R. Marenka If life's not fun, you're not doing it right! | [EMAIL PROTECTED] | -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]
