Bug#712789: Fwd: avogadro crashes

2013-06-20 Thread Daniel Leidert
Package: avogadro
Followup-For: Bug #712789

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Hash: SHA1

Attached is a backtrace.


- -- System Information:
Debian Release: jessie/sid
  APT prefers unstable
  APT policy: (850, 'unstable'), (560, 'stable'), (500, 'oldstable'), (110, 
'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 3.9-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages avogadro depends on:
ii  libavogadro1   1.0.3-11~dbg
ii  libc6  2.17-5
ii  libgcc11:4.8.1-3
ii  libgl2ps0  1.3.8-1
ii  libopenbabel4  2.3.2+dfsg-1
ii  libqt4-opengl  4:4.8.4+dfsg-4
ii  libqtcore4 4:4.8.4+dfsg-4
ii  libqtgui4  4:4.8.4+dfsg-4
ii  libstdc++6 4.8.1-3
ii  libx11-6   2:1.6.0-1

Versions of packages avogadro recommends:
pn  avogadro-data  none

avogadro suggests no packages.

- -- no debconf information

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Starting program: /usr/bin/avogadro 
warning: no loadable sections found in added symbol-file system-supplied DSO at 
0x77ffa000
warning: Could not load shared library symbols for linux-vdso.so.1.
Do you need set solib-search-path or set sysroot?
[Thread debugging using libthread_db enabled]
Using host libthread_db library /lib/x86_64-linux-gnu/libthread_db.so.1.
[New Thread 0x7fffccc96700 (LWP 15684)]
[New Thread 0x7fffc01c0700 (LWP 15685)]

Program received signal SIGSEGV, Segmentation fault.
0x in ?? ()
#0  0x in ?? ()
No symbol table info available.
#1  0x76304b31 in QObject::disconnect (sender=0x11d4990, 
signal=signal@entry=0x0, receiver=receiver@entry=0x8f3780, 
method=method@entry=0x0) at kernel/qobject.cpp:2887
method_name = {static shared_null = {ref = {_q_value = 1}, alloc = 0, 
size = 0, data = 0x6999d8 QByteArray::shared_null+24 , 
array = }, static shared_empty = {ref = {_q_value = 2}, alloc = 
0, size = 0, 
data = 0x7664b798 QByteArray::shared_empty+24 , array = 
}, d = 0x6999c0 QByteArray::shared_null}
method_arg = 0x0
membcode = optimized out
method_found = false
signal_arg = 0x0
signal_name = {static shared_null = {ref = {_q_value = 1}, alloc = 0, 
size = 0, data = 0x6999d8 QByteArray::shared_null+24 , 
array = }, static shared_empty = {ref = {_q_value = 2}, alloc = 
0, size = 0, 
data = 0x7664b798 QByteArray::shared_empty+24 , array = 
}, d = 0x6999c0 QByteArray::shared_null}
signal_found = false
res = false
smeta = optimized out
#2  0x75cb7aac in Avogadro::GLWidget::removeEngine (this=0x8f3780, 
engine=0x11d4990)
at /tmp/buildd/avogadro-1.0.3/libavogadro/src/glwidget.cpp:1350
No locals.
#3  0x00428983 in Avogadro::MainWindow::removeEngineClicked 
(this=0x8ce340)
at /tmp/buildd/avogadro-1.0.3/avogadro/src/mainwindow.cpp:3272
engine = 0x11d4990
#4  0x00437132 in Avogadro::MainWindow::qt_static_metacall 
(_o=optimized out, _c=optimized out, _id=optimized out, 
_a=optimized out) at 
/tmp/buildd/avogadro-1.0.3/obj-x86_64-linux-gnu/avogadro/src/mainwindow.moc:232
_t = optimized out
#5  0x76302dcf in QMetaObject::activate (sender=sender@entry=0x11d05a0, 
m=m@entry=0x772daee0 QAbstractButton::staticMetaObject, 
local_signal_index=local_signal_index@entry=2, 
argv=argv@entry=0x7fffc9f0) at kernel/qobject.cpp:3539
receiverInSameThread = true
previousSender = 0x0
callFunction = 0x4370c0 
Avogadro::MainWindow::qt_static_metacall(QObject*, QMetaObject::Call, int, 
void**)
receiver = 0x8ce340
currentSender = {sender = 0x11d05a0, signal = 29, ref = 1}
method_relative = 69
c = 0xe68550
last = 0xe68550
methodOffset = optimized out
signal_absolute_index = 29
empty_argv = {0x0}
locker = {val = 11786032}
connectionLists = 0x1255730
list = 0x11d0ae0
signalOffset = optimized out
signal_index = optimized out
currentThreadId = 140737353873408
#6  0x76e7ccb2 in QAbstractButton::clicked (this=this@entry=0x11d05a0, 
_t1=false)
at .moc/release-shared/moc_qabstractbutton.cpp:220
_a = {0x0, 0x7fffc9ec}
#7  0x76bd1a1e in QAbstractButtonPrivate::emitClicked 
(this=this@entry=0x11d0600) at widgets/qabstractbutton.cpp:548
guard = {o = 0x11d05a0}
#8  0x76bd2210 in QAbstractButtonPrivate::click 
(this=this@entry=0x11d0600) at widgets/qabstractbutton.cpp:541
changeState = optimized out
guard = {o = 0x11d05a0}
#9  0x76bd247c in QAbstractButton::mouseReleaseEvent (this=0x11d05a0, 
e=0x7fffd250) at widgets/qabstractbutton.cpp:1123
 

Bug#712789: Fwd: avogadro crashes

2013-06-20 Thread Daniel Leidert
Package: avogadro
Version: 1.1.0-4
Followup-For: Bug #712789

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Hash: SHA1

And the backtrace for 1.1.0.


- -- System Information:
Debian Release: jessie/sid
  APT prefers unstable
  APT policy: (850, 'unstable'), (560, 'stable'), (500, 'oldstable'), (110, 
'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 3.9-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages avogadro depends on:
ii  libavogadro1   1.1.0-4
ii  libc6  2.17-5
ii  libgcc11:4.8.1-3
ii  libopenbabel4  2.3.2+dfsg-1
ii  libqt4-opengl  4:4.8.4+dfsg-4
ii  libqtcore4 4:4.8.4+dfsg-4
ii  libqtgui4  4:4.8.4+dfsg-4
ii  libstdc++6 4.8.1-3
ii  libx11-6   2:1.6.0-1

Versions of packages avogadro recommends:
pn  avogadro-data  none

avogadro suggests no packages.

- -- no debconf information

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=fG9P
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Starting program: /usr/bin/avogadro 
warning: no loadable sections found in added symbol-file system-supplied DSO at 
0x77ffa000
warning: Could not load shared library symbols for linux-vdso.so.1.
Do you need set solib-search-path or set sysroot?
[Thread debugging using libthread_db enabled]
Using host libthread_db library /lib/x86_64-linux-gnu/libthread_db.so.1.
[New Thread 0x7fffcbc3c700 (LWP 11973)]

Program received signal SIGSEGV, Segmentation fault.
0x76743b2f in QObject::disconnect (sender=0xfd01e0, 
signal=signal@entry=0x0, receiver=receiver@entry=0x8f8010, 
method=method@entry=0x0) at kernel/qobject.cpp:2887
2887kernel/qobject.cpp: Datei oder Verzeichnis nicht gefunden.
#0  0x76743b2f in QObject::disconnect (sender=0xfd01e0, 
signal=signal@entry=0x0, receiver=receiver@entry=0x8f8010, 
method=method@entry=0x0) at kernel/qobject.cpp:2887
method_name = {static shared_null = {ref = {_q_value = 32}, alloc = 0, 
size = 0, 
data = 0x76a8a7b8 QByteArray::shared_null+24 , array = }, 
static shared_empty = {ref = {_q_value = 1}, alloc = 0, 
size = 0, data = 0x76a8a798 QByteArray::shared_empty+24 , 
array = }, d = 0x76a8a7a0 QByteArray::shared_null}
method_arg = 0x0
membcode = optimized out
method_found = false
signal_arg = 0x0
signal_name = {static shared_null = {ref = {_q_value = 32}, alloc = 0, 
size = 0, 
data = 0x76a8a7b8 QByteArray::shared_null+24 , array = }, 
static shared_empty = {ref = {_q_value = 1}, alloc = 0, 
size = 0, data = 0x76a8a798 QByteArray::shared_empty+24 , 
array = }, d = 0x76a8a7a0 QByteArray::shared_null}
signal_found = false
res = false
smeta = optimized out
#1  0x75eca14c in Avogadro::GLWidget::removeEngine (this=0x8f8010, 
engine=0xfd01e0)
at /tmp/buildd/avogadro-1.1.0/libavogadro/src/glwidget.cpp:2131
No locals.
#2  0x00425a53 in Avogadro::MainWindow::removeEngineClicked 
(this=0x8d13d0)
at /tmp/buildd/avogadro-1.1.0/avogadro/src/mainwindow.cpp:3737
engine = 0x0
#3  0x00438e8a in Avogadro::MainWindow::qt_static_metacall 
(_o=optimized out, _c=optimized out, _id=optimized out, 
_a=optimized out) at 
/tmp/buildd/avogadro-1.1.0/obj-x86_64-linux-gnu/avogadro/src/mainwindow.moc:236
_t = optimized out
#4  0x76741dcf in QMetaObject::activate (sender=sender@entry=0xfca650, 
m=m@entry=0x77719ee0 QAbstractButton::staticMetaObject, 
local_signal_index=local_signal_index@entry=2, 
argv=argv@entry=0x7fffc9e0) at kernel/qobject.cpp:3539
receiverInSameThread = true
previousSender = 0x0
callFunction = 0x438970 
Avogadro::MainWindow::qt_static_metacall(QObject*, QMetaObject::Call, int, 
void**)
receiver = 0x8d13d0
currentSender = {sender = 0xfca650, signal = 29, ref = 1}
method_relative = 70
c = 0x104d870
last = 0x104d870
methodOffset = optimized out
signal_absolute_index = 29
empty_argv = {0x0}
locker = {val = 9354064}
connectionLists = 0x102ce10
list = 0xfcab90
signalOffset = optimized out
signal_index = optimized out
currentThreadId = 140737353873408
#5  0x772bbcb2 in QAbstractButton::clicked (this=this@entry=0xfca650, 
_t1=false) at .moc/release-shared/moc_qabstractbutton.cpp:220
_a = {0x0, 0x7fffc9dc}
#6  0x77010a1e in QAbstractButtonPrivate::emitClicked 
(this=this@entry=0xfca6b0) at widgets/qabstractbutton.cpp:548
guard = {o = 0xfca650}
#7  0x77011210 in QAbstractButtonPrivate::click 
(this=this@entry=0xfca6b0) at widgets/qabstractbutton.cpp:541
changeState = optimized out
guard = {o = 0xfca650}
#8  0x7701147c in 

Bug#712789: Fwd: avogadro crashes

2013-06-19 Thread Prathibha B
Package: avogadro


Version: 1.0.3

Severity: normal


Steps to reproduce the bug:

Step 1: Click on Settings - Toolbars - Display Types.
Step 2:Click the Add Button and make the entry for Axes.
Step 3: Select the Axes Button and Click Remove Button twice. The
application gets closed.

The patch for the same is attached.

-- 
Regards,
Prathibha
C-DAC
Chennai


removeEngine.patch
Description: Binary data