On 04.12.2017 17:33, Andreas Tille wrote: > Thanks to the test suite we now know that the issue is not solved yet: > > $ sh run-unit-test > > [2017-12-04 17:28:54] Beginning TopHat run (v2.1.1) > ----------------------------------------------- > [2017-12-04 17:28:54] Checking for Bowtie > Bowtie version: 2.3.3.1 > Error locating program: samtools_0.1.18 > > > Unfortunately a grep for this explicite string has several hits. I > have no idea what might happen if we replace it by /usr/bin/samtools.
Ah, I took this as a build-only problem. Will look into it. Fabian