I have just upgraded a box from Jessie to Testing, same problem!

I would bump the "severity" up from important to serious since it rendereds the 
box unusable.

In my case the box gets stuck during installation of memcache.

Error getting authority: Error initializing authority: Error calling 
StartServiceByName for org.freedesktop.PolicyKit1: Timeout was reached 
(g-io-error-quark, 24)

Cannot stop/start services:

[....] Stopping apache2 (via systemctl): apache2.serviceError getting 
authority: Error initializing authority: Error calling StartServiceByName for 
org.freedesktop.PolicyKit1: GDBus.Error:org.freedesktop.DBus.Error.TimedOut: 
Failed to activate service 'org.freedesktop.PolicyKit1': timed out 
(g-dbus-error-quark, 20)

Kind regards.

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