Bug#953832: cannot allocate memory in static TLS block (Was: Bug#953832: drmaa: autopkgtest failure: RuntimeError: Could not find drmaa library)
Hi Andreas, On 14-03-2020 14:30, Andreas Tille wrote: > Hi Paul, [...] > Any help would be welcome I can't help you with this. Paul signature.asc Description: OpenPGP digital signature
Bug#953832: cannot allocate memory in static TLS block (Was: Bug#953832: drmaa: autopkgtest failure: RuntimeError: Could not find drmaa library)
Control: tags -1 help
Control: retitle -1 cannot allocate memory in static TLS block
Hi Paul,
On Fri, Mar 13, 2020 at 11:09:31PM +0100, Paul Gevers wrote:
>
> raise RuntimeError(('Could not find drmaa library. Please specify
> its ' +
> RuntimeError: Could not find drmaa library. Please specify its full
> path using the environment variable DRMAA_LIBRARY_PATH
I've fixed this in Git. Unfortunately I get a new issue when importing
drmaa
$ python3
Python 3.7.6 (default, Jan 19 2020, 22:34:52)
[GCC 9.2.1 20200117] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import drmaa
Traceback (most recent call last):
File "", line 1, in
File
"/home/andreas/debian-maintain/salsa/med-team/python-drmaa/drmaa/__init__.py",
line 65, in
from .session import JobInfo, JobTemplate, Session
File
"/home/andreas/debian-maintain/salsa/med-team/python-drmaa/drmaa/session.py",
line 39, in
from drmaa.helpers import (adapt_rusage, Attribute,
attribute_names_iterator,
File
"/home/andreas/debian-maintain/salsa/med-team/python-drmaa/drmaa/helpers.py",
line 36, in
from drmaa.wrappers import (drmaa_attr_names_t, drmaa_attr_values_t,
File
"/home/andreas/debian-maintain/salsa/med-team/python-drmaa/drmaa/wrappers.py",
line 58, in
_lib = CDLL(libpath, mode=RTLD_GLOBAL)
File "/usr/lib/python3.7/ctypes/__init__.py", line 364, in __init__
self._handle = _dlopen(self._name, mode)
OSError: /usr/lib/x86_64-linux-gnu/libjemalloc.so.2: cannot allocate memory in
static TLS block
Any help would be welcome
Andreas.
--
http://fam-tille.de
Bug#953832: drmaa: autopkgtest failure: RuntimeError: Could not find drmaa library
Source: drmaa
Version: 0.7.9-1
X-Debbugs-CC: debian...@lists.debian.org
Severity: serious
User: debian...@lists.debian.org
Usertags: fails-always
Dear maintainers,
With a recent upload of drmaa you added an autopkgtest, great. However,
it fails. I copied some of the output at the bottom of this report.
Currently this is blocking the migration to testing [1]. Can you please
investigate the situation and fix it?
More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul
[1] https://qa.debian.org/excuses.php?package=drmaa
https://ci.debian.net/data/autopkgtest/testing/amd64/d/drmaa/4335284/log.gz
autopkgtest [03:10:24]: test autodep8-python3: set -e ; for py in
$(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing
with $py:" ; $py -c "import drmaa; print(drmaa)" ; done
autopkgtest [03:10:24]: test autodep8-python3: [---
Testing with python3.8:
Traceback (most recent call last):
File "", line 1, in
File "/usr/lib/python3/dist-packages/drmaa/__init__.py", line 65, in
from .session import JobInfo, JobTemplate, Session
File "/usr/lib/python3/dist-packages/drmaa/session.py", line 39, in
from drmaa.helpers import (adapt_rusage, Attribute,
attribute_names_iterator,
File "/usr/lib/python3/dist-packages/drmaa/helpers.py", line 36, in
from drmaa.wrappers import (drmaa_attr_names_t, drmaa_attr_values_t,
File "/usr/lib/python3/dist-packages/drmaa/wrappers.py", line 52, in
raise RuntimeError(('Could not find drmaa library. Please specify
its ' +
RuntimeError: Could not find drmaa library. Please specify its full
path using the environment variable DRMAA_LIBRARY_PATH
autopkgtest [03:10:24]: test autodep8-python3: ---]
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