Processed: reassign 944854 to cyrus-common, notfound 944705 in 1.0.7+ds-1, found 944705 in 1.0.7+ds1-1 ...

2019-11-17 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 944854 cyrus-common 3.0.8-6+deb10u1
Bug #944854 [cyrus-common (3.0.8-6+deb10u1) ...] cyrus-common (3.0.8-6+deb10u1) 
skiplist Unknown type of DB: BACKUP
Warning: Unknown package '3.0.8-6+deb10u1'
Warning: Unknown package '...'
Bug reassigned from package 'cyrus-common (3.0.8-6+deb10u1) ...' to 
'cyrus-common'.
Ignoring request to alter found versions of bug #944854 to the same values 
previously set
Ignoring request to alter fixed versions of bug #944854 to the same values 
previously set
Bug #944854 [cyrus-common] cyrus-common (3.0.8-6+deb10u1) skiplist Unknown type 
of DB: BACKUP
Marked as found in versions cyrus-imapd/3.0.8-6+deb10u1.
> notfound 944705 1.0.7+ds-1
Bug #944705 [python3-mako] alembic: failing tests with python3.8
There is no source info for the package 'python3-mako' at version '1.0.7+ds-1' 
with architecture ''
Unable to make a source version for version '1.0.7+ds-1'
No longer marked as found in versions 1.0.7+ds-1.
> found 944705 1.0.7+ds1-1
Bug #944705 [python3-mako] alembic: failing tests with python3.8
Marked as found in versions mako/1.0.7+ds1-1.
> tags 942858 + sid bullseye
Bug #942858 [python3-leveldb] Doesn't support Python 3.8: SystemError: bad call 
flags
Added tag(s) bullseye and sid.
> tags 942899 + sid bullseye experimental
Bug #942899 [src:joblib] joblib 0.14.0 is required for Python 3.8 support
Added tag(s) experimental, bullseye, and sid.
> tags 944026 + sid bullseye
Bug #944026 [python3-freezegun] freezegun: failing tests with python3.8
Added tag(s) bullseye and sid.
> tags 944995 + sid bullseye
Bug #944995 [src:gtkimageview] gtkimageview FTBFS: error: ‘GTypeDebugFlags’ is 
deprecated
Added tag(s) sid and bullseye.
> notfound 944911 1.00-3+b1
Bug #944911 [src:libfiu] libfiu: FBTFS: Found too many matching python3 bindings
The source 'libfiu' and version '1.00-3+b1' do not appear to match any binary 
packages
No longer marked as found in versions libfiu/1.00-3+b1.
> found 944911 1.00-3
Bug #944911 [src:libfiu] libfiu: FBTFS: Found too many matching python3 bindings
Marked as found in versions libfiu/1.00-3.
> tags 944872 + sid bullseye
Bug #944872 [src:libindicator] libindicator FTBFS: error: G_ADD_PRIVATE 
[-Werror]
Added tag(s) bullseye and sid.
> tags 944853 + sid bullseye
Bug #944853 {Done: Sandro Knauß } [src:calligra] calligra: 
FTBFS with Qt 5.12
Added tag(s) bullseye and sid.
> tags 934482 + sid bullseye buster
Bug #934482 [src:prctl] prctl: probably shouldn't be in testing/stable
Added tag(s) buster, bullseye, and sid.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
934482: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=934482
942858: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=942858
942899: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=942899
944026: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944026
944705: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944705
944853: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944853
944854: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944854
944872: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944872
944911: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944911
944995: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944995
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#944572: marked as done (simka: debian/rules does not trap for errors)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Mon, 18 Nov 2019 07:05:26 +
with message-id 
and subject line Bug#944572: fixed in simka 1.5.1-2
has caused the Debian Bug report #944572,
regarding simka: debian/rules does not trap for errors
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
944572: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944572
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:simka
Version: 1.5.1-1
Severity: serious
Tags: patch

Dear maintainer: The debian/rules file for this package has a "for"
which does not always trap errors if they happen. To see why this
is a problem, compare the following two Makefile snippets:

for command in false true; do $${command}; done
echo MARK

for command in true false; do $${command}; done
echo MARK

The first one will succeed, the second one will not, but
in fact none of them should really succeed.

The simple patch below should fix this.

Please see Debian Policy 4.6. "Error trapping in makefiles"
for a more complete explanation:

https://www.debian.org/doc/debian-policy/ch-source.html#error-trapping-in-makefiles

Thanks.

--- a/debian/rules
+++ b/debian/rules
@@ -15,7 +15,7 @@ override_dh_install:
rm -r debian/tmp/usr/example \
debian/tmp/usr/scripts
chrpath --delete debian/simka/usr/bin/*
-   for file in debian/simkamin/usr/share/simkamin/*.py; do mv "$$file" 
"$${file%%.py}"; done
+   set -e; for file in debian/simkamin/usr/share/simkamin/*.py; do mv 
"$$file" "$${file%%.py}"; done
mv debian/simkamin/usr/share/simkamin/simkaMin_utils 
debian/simkamin/usr/share/simkamin/simkaMin_utils.py

 override_dh_fixperms:
--- End Message ---
--- Begin Message ---
Source: simka
Source-Version: 1.5.1-2

We believe that the bug you reported is fixed in the latest version of
simka, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 944...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Shayan Doust  (supplier of updated simka package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 18 Nov 2019 07:05:39 +0100
Source: simka
Binary: simka simkamin
Architecture: source
Version: 1.5.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 

Changed-By: Shayan Doust 
Description:
 simka  - comparative metagenomics method dedicated to NGS datasets
 simkamin   - approximate comparative metagenomics method dedicated to NGS data
Closes: 944572
Changes:
 simka (1.5.1-2) unstable; urgency=medium
 .
   [ Steffen Moeller ]
   * d/u/metadata: yamllint
   * Update metadata with ref to conda
 .
   [ Shayan Doust ]
   * Fix debian/rules not trapping for errors (Closes: #944572)
   * Specify architectures that can build this package
   * More verbose output and slight change to simkamin.install
 .
   [ Andreas Tille ]
   * Standards-Version: 4.4.1
   * Remove trailing whitespace in debian/rules
   * Set upstream metadata fields: Repository.
Checksums-Sha1:
 1ff27e97964ecaaff512ab44ef1cc2f85189fb67 2191 simka_1.5.1-2.dsc
 3157592ef3db566354f1e37f9a2d019f1d026d34 20580 simka_1.5.1-2.debian.tar.xz
Checksums-Sha256:
 a64b14ea7b40d6a5c16bc1b120a1a06b5060bdb42f84eaca0c492e482b62db2f 2191 
simka_1.5.1-2.dsc
 59c00483c1772e134535d371c85b88e074307c5768912c8074cd974630eae4ca 20580 
simka_1.5.1-2.debian.tar.xz
Files:
 c0cb963d78fdae54178bda183de8c179 2191 science optional simka_1.5.1-2.dsc
 ffa8cfa42c80ec14a689fcab8f6260b6 20580 science optional 
simka_1.5.1-2.debian.tar.xz

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Bug#942235: Adding Python 3.8 as a supported Python3 version

2019-11-17 Thread Matthias Klose
On 18.11.19 07:52, Alastair McKinstry wrote:
> So I've uploaded a python-xarray 0.14.0-2 which passes on python3.7.
> 
> Its failing on python 3.8 but apparently due to pandas not ready on 3.8, so it
> should be ok to pass as the transition completes.
> 
> xarray really needs dask >= 2.0 but version 1 is in unstable; I've disabled 
> some
> functionality (dask='parallelize') and marked some tests xfail until this is 
> done.
> 
> Alastair

yes, people are aware of a needed dask update, see #942235. There's now also a
dask 2.8 release available, I didn't look at that yet.

> On 07/11/2019 14:08, Matthias Klose wrote:
>> This weekend, I am planning to upload python3-defaults, adding python3.8 as a
>> supported Python3 version.  This may introduce some churn in unstable until
>> the basic binNMUs are available as well.
>>
>>
>>  - python-xarray #944044. 1.4 is already broken with Python 3.7. For
>>    Ubuntu I fell back to 1.2.1. 1.2.3 might work as well, still seeing
>>    one or two test failures.
>>
>> Packages building on top of numpy/scipy/pandas, like the PyAstro stack,
>> continue to work with these updates, despite some new test failures.
>>
>> Matthias
>>
>> [1] https://wiki.debian.org/Python/Python3.8.
>> [2]
>> https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=python3.8;users=debian-pyt...@lists.debian.org
>>
>>



Processed: raise severity of issues for Python 3.8, now a supported Python3 version

2019-11-17 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> severity 942684 serious
Bug #942684 [src:mod-wsgi] mod-wsgi needs a new upstream version to support 
python3.8
Severity set to 'serious' from 'important'
> severity 942685 serious
Bug #942685 [src:netifaces] fix installation of 3.8 extensions
Severity set to 'serious' from 'important'
> severity 942686 serious
Bug #942686 [src:python-apsw] fix the installation of 3.8 extensions
Severity set to 'serious' from 'important'
> severity 942693 serious
Bug #942693 [src:python-hypothesis] new upstream version needed to support 
python 3.8
Severity set to 'serious' from 'important'
> severity 942708 serious
Bug #942708 [src:python-nacl] update pynacl for recent hypothesis version
Severity set to 'serious' from 'important'
> severity 942714 serious
Bug #942714 [src:pycxx] pycxx needs fix for python3.8 header installation
Severity set to 'serious' from 'important'
> severity 942744 serious
Bug #942744 [src:gst-python1.0] fix python-config call to get flags for 
embedded build
Severity set to 'serious' from 'important'
> severity 942766 serious
Bug #942766 [src:matplotlib] matplotlib should error out when failing to 
build/install
Severity set to 'serious' from 'important'
> severity 942791 serious
Bug #942791 [src:pymssql] fix pymssql for python 3.8
Severity set to 'serious' from 'important'
> severity 942794 serious
Bug #942794 [src:python-scipy] scipy ftbfs trying to build the docs with 
python3.8
Severity set to 'serious' from 'important'
> severity 942804 serious
Bug #942804 [src:petsc4py] fix build with python3.8
Severity set to 'serious' from 'important'
> severity 943418 serious
Bug #943418 [src:python-xlrd] python3.8 dropped time.clock()
Severity set to 'serious' from 'important'
> severity 943442 serious
Bug #943442 [src:reprozip] reprozip needs a new upstream version for Python 3.8
Severity set to 'serious' from 'important'
> severity 943495 serious
Bug #943495 [src:setools] fix building with a new compiler warning when 
building for python3.8
Severity set to 'serious' from 'important'
> severity 943501 serious
Bug #943501 [src:python-xlrd] ftbfs with python3.8 (test failure)
Severity set to 'serious' from 'important'
> severity 943611 serious
Bug #943611 [src:cegui-mk2] cegui-mk2 fails to package extensions for python 3.8
Severity set to 'serious' from 'important'
> severity 943832 serious
Bug #943832 [src:asyncpg] asyncpg fails tests with python3.8
Severity set to 'serious' from 'important'
> severity 943966 serious
Bug #943966 [cookiecutter] cookiecutter: failing tests with python3.8
Severity set to 'serious' from 'important'
> severity 944026 serious
Bug #944026 [python3-freezegun] freezegun: failing tests with python3.8
Severity set to 'serious' from 'important'
> severity 944160 serious
Bug #944160 [src:python-pulp] Fix time.clock import for python3.8
Severity set to 'serious' from 'important'
> severity 944242 serious
Bug #944242 [src:python-biopython] fix build & test issues with Python 3.8
Severity set to 'serious' from 'important'
> severity 944250 serious
Bug #944250 [src:python-jsonrpc] fix tests with python3.8
Severity set to 'serious' from 'important'
> severity 944320 serious
Bug #944320 [src:python-blosc] platform.linux_distribution is gone in 3.8
Severity set to 'serious' from 'important'
> severity 943609 serious
Bug #943609 [src:breezy] breezy ftbfs with python 3.8
Severity set to 'serious' from 'important'
> severity 942678 serious
Bug #942678 [src:subvertpy] subvertpy ftbfs with python 3.8 (tests)
Severity set to 'serious' from 'important'
> severity 942858 serious
Bug #942858 [python3-leveldb] Doesn't support Python 3.8: SystemError: bad call 
flags
Severity set to 'serious' from 'important'
> severity 942899 serious
Bug #942899 [src:joblib] joblib 0.14.0 is required for Python 3.8 support
Severity set to 'serious' from 'important'
> severity 943334 serious
Bug #943334 [src:dh-python] please run the tests for all supported python 
versions
Severity set to 'serious' from 'important'
> severity 943608 serious
Bug #943608 [src:beancount] tests segfault when run with Python 3.8
Severity set to 'serious' from 'important'
> severity 943613 serious
Bug #943613 [src:pygame] pygame doesn't find tests when run with python3.8
Severity set to 'serious' from 'important'
> severity 943614 serious
Bug #943614 [src:python-cytoolz] cytoolz ftbfs with python3.8
Severity set to 'serious' from 'important'
> severity 943615 serious
Bug #943615 [src:python-multidict] python-multidict ftbfs with python3.8 (test 
failures)
Severity set to 'serious' from 'important'
> severity 943619 serious
Bug #943619 [src:python-skbio] test failures when running with python3.8
Severity set to 'serious' from 'important'
> severity 943620 serious
Bug #943620 [src:gammapy] gammapy's tests fail with numpy-1.17 and python3.8
Severity set to 'serious' from 'important'
> severity 943621 serious
Bug #943621 [src:uvloop] uvloop needs an update for python 3.8
Severity set to 

Bug#944894: marked as done (/usr/bin/dh_python2: is a #!/usr/bin/python script but does not depend on python)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Mon, 18 Nov 2019 06:50:22 +
with message-id 
and subject line Bug#944894: fixed in python-defaults 2.7.17-2
has caused the Debian Bug report #944894,
regarding /usr/bin/dh_python2: is a #!/usr/bin/python script but does not 
depend on python
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
944894: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944894
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: python2
Version: 2.7.17-1
Severity: serious
File: /usr/bin/dh_python2
Justification: Policy 3.5
Control: affects -1 src:dbus-python

As instructed by the py2removal mass-bug-filing templates, I have been
removing references to python from packages I maintain, and replacing them
with references to python2 if the Python 2 modules are still needed.

This seems to have caused dbus-python to FTBFS when NMU'd for the python3.8
transition:

https://buildd.debian.org/status/fetch.php?pkg=dbus-python=amd64=1.2.12-1%2Bb1=1573984727=0
> Unpacking python2 (2.7.17-1) ...
...
> Unpacking dh-python (4.20191017) ...
...
>debian/rules override_dh_python2
> make[1]: Entering directory '/<>'
> py3versions: no X-Python3-Version in control file, using supported versions
> dh_python2
> make[1]: dh_python2: Command not found
> make[1]: *** [debian/rules:214: override_dh_python2] Error 127

/usr/bin/dh_python2 is in the python2 binary package, which is
installed, so this "command not found" shouldn't be caused by absence
of /usr/bin/dh_python2.

As far as I can work out, it's actually caused by the absence of
the interpreter named in its first line, which is /usr/bin/python
(shells do not make it easy to distinguish between these two
failure modes). dbus-python no longer build-depends on python, so
/usr/bin/python2.7 and /usr/bin/python2 exist in the build environment,
but /usr/bin/python does not.

I think /usr/bin/dh_python2 should now be a #!/usr/bin/python2 (or maybe
#!/usr/bin/python2.7) script, instead of a #!/usr/bin/python script.

Regards,
smcv



Complete list of package versions from sbuild log:

adduser_3.118
apt_1.8.4
apt-transport-https_1.8.4
autoconf_2.69-11
autoconf-archive_20190106-2
automake_1:1.16.1-4
autopoint_0.19.8.1-9
autotools-dev_20180224.1
base-files_11
base-passwd_3.5.46
bash_5.0-5
binutils_2.33.1-2
binutils-common_2.33.1-2
binutils-x86-64-linux-gnu_2.33.1-2
bsdmainutils_11.1.2+b1
bsdutils_1:2.34-0.1
build-essential_12.8
bzip2_1.0.8-2
ca-certificates_20190110
coreutils_8.30-3+b1
cpp_4:9.2.1-3.1
cpp-9_9.2.1-19
dash_0.5.10.2-6
dbus_1.12.16-2
debconf_1.5.73
debhelper_12.7.1
debian-archive-keyring_2019.1
debianutils_4.9
dh-autoreconf_19
dh-python_4.20191017
dh-strip-nondeterminism_1.6.2-1
diffutils_1:3.7-3
docbook-xml_4.5-9
docbook-xsl_1.79.1+dfsg-2
dpkg_1.19.7
dpkg-dev_1.19.7
dwz_0.13-2
e2fsprogs_1.45.4-1
fakeroot_1.24-1
fdisk_2.34-0.1
file_1:5.37-6
findutils_4.7.0-1
g++_4:9.2.1-3.1
g++-9_9.2.1-19
gcc_4:9.2.1-3.1
gcc-9_9.2.1-19
gcc-9-base_9.2.1-19
gettext_0.19.8.1-9
gettext-base_0.19.8.1-9
gir1.2-glib-2.0_1.62.0-2
gpgv_2.2.17-3
grep_3.3-1
groff-base_1.22.4-3
gzip_1.9-3+b1
hostname_3.23
init-system-helpers_1.57
intltool-debian_0.35.0+20060710.5
libacl1_2.2.53-5
libapparmor1_2.13.3-7
libapt-pkg5.0_1.8.4
libarchive-zip-perl_1.67-1
libasan5_9.2.1-19
libatomic1_9.2.1-19
libattr1_1:2.4.48-5
libaudit-common_1:2.8.5-2
libaudit1_1:2.8.5-2
libbinutils_2.33.1-2
libblkid-dev_2.34-0.1
libblkid1_2.34-0.1
libbsd0_0.10.0-1
libbz2-1.0_1.0.8-2
libc-bin_2.29-3
libc-dev-bin_2.29-3
libc6_2.29-3
libc6-dev_2.29-3
libcap-ng0_0.7.9-2.1
libcc1-0_9.2.1-19
libcom-err2_1.45.4-1
libcroco3_0.6.13-1
libdb5.3_5.3.28+dfsg1-0.6
libdbus-1-3_1.12.16-2
libdbus-1-dev_1.12.16-2
libdebconfclient0_0.250
libdebhelper-perl_12.7.1
libdpkg-perl_1.19.7
libelf1_0.176-1.1
libexpat1_2.2.9-1
libexpat1-dev_2.2.9-1
libext2fs2_1.45.4-1
libfakeroot_1.24-1
libfdisk1_2.34-0.1
libffi-dev_3.2.1-9
libffi6_3.2.1-9
libfile-stripnondeterminism-perl_1.6.2-1
libgcc-9-dev_9.2.1-19
libgcc1_1:9.2.1-19
libgcrypt20_1.8.5-3
libgdbm-compat4_1.18.1-5
libgdbm6_1.18.1-5
libgirepository-1.0-1_1.62.0-2
libglib2.0-0_2.62.2-3
libglib2.0-bin_2.62.2-3
libglib2.0-data_2.62.2-3
libglib2.0-dev_2.62.2-3
libglib2.0-dev-bin_2.62.2-3
libgmp10_2:6.1.2+dfsg-4
libgnutls30_3.6.10-4
libgomp1_9.2.1-19
libgpg-error0_1.36-7
libhogweed5_3.5.1+really3.5.1-2
libicu63_63.2-2
libidn2-0_2.2.0-2
libisl21_0.21-2
libitm1_9.2.1-19
libjs-jquery_3.3.1~dfsg-3
libjs-sphinxdoc_1.8.5-3
libjs-underscore_1.9.1~dfsg-1
liblsan0_9.2.1-19
liblz4-1_1.9.2-2
liblzma5_5.2.4-1+b1
libmagic-mgc_1:5.37-6
libmagic1_1:5.37-6
libmount-dev_2.34-0.1
libmount1_2.34-0.1

Bug#944249: gnuplot-mode does not work with emacs26

2019-11-17 Thread Dima Kogan
Thanks for the patches, Agustin. I just tried it out. Works for the most
part. One thing that doesn't work for me is (gnuplot-mode) being
executed when opening a .gp file. You added this to the package, and the
dh-elpa machinery is creating the appropriate file:

  /etc/emacs/site-start.d/50elpa-gnuplot-mode.el

I don't think this is being evaluated, however. Is it working for you?
Do you know at which point in the emacs startup sequence this is
sourced? Is it always supposed to be sourced? What about 'emacs -q'? Or
'emacs -Q'?

Thanks



Bug#944949: dbus-python: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
On 17.11.19 20:53, Simon McVittie wrote:
> Control: tags 944949 + moreinfo
> 
> On Sun, 17 Nov 2019 at 19:07:39 +, Matthias Klose wrote:
>> Please add an explicit build dependency on dh-python.
> 
> As far as I can see it's been explicit since 2015. Is anything more
> needed here?
> 
> Note that the FTBFS with
> 
> dh_python2
> make[1]: dh_python2: Command not found
> 
> seems to be because /usr/bin/dh_python2 is a #!/usr/bin/python script in
> a package that doesn't depend on python (#944894). The misleading
> "Command not found" is similar to this:
> 
> $ cat > Makefile
> all:
>   ./script
> $ cat > script
> #!/usr/bin/does-not-exist
> $ chmod +x script
> $ make
> ./script
> make: ./script: Command not found
> make: *** [Makefile:2: all] Error 127
> 
> I have a workaround which I believe should still be harmless after
> dh_python2 moves out of python2 (presumably into dh-python?), which I'll
> upload soon.
> 
> If that doesn't work, I'll temporarily re-add the python B-D so the
> python3.8 transition can go through, and remove it after #944894 is
> resolved.
> 
> It's unfortunate that the python3.8 transition, the effort to replace
> references to python2 with python, and the migration of dh_python2 from
> python2 to dh-python (?) are happening at the same time and affect
> overlapping sets of packages. Perhaps one (or more) of these could be
> deferred until one of the others has been done?

this specific issue is unrelated. dh_python2.py was calling python, not python2.
now fixed in an interim upload.

Still waiting for feedback from my co-maintainer how to proceed with the dropped
dh-python dependency in python3-defaults.



Bug#933932: marked as done (RM: strongwind -- RoQA; dead upstream; python2-only; last MU in 2012)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Mon, 18 Nov 2019 06:10:21 +
with message-id 
and subject line Bug#933932: Removed package(s) from unstable
has caused the Debian Bug report #933932,
regarding RM: strongwind -- RoQA; dead upstream; python2-only; last MU in 2012
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
933932: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=933932
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: strongwind
Version: 0.9-2
Severity: serious
Justification: unmaintained

Hello,

The state of the strongwind package is questionable. It has not been
updated since feb 2012, and upstream does not exist any more. It is
still using python2 syntax, and depends on python-pyatspi which is to be
removed.

strongwind happened to be removed from testing in 2018 due to some
pyatspi2 dependency (see #896341), but that was fixed. I'm however
questioning whether we should keep the package at all given its abandon
state?

Samuel

-- System Information:
Debian Release: bullseye/sid
  APT prefers testing
  APT policy: (990, 'testing'), (500, 'unstable-debug'), (500, 
'testing-debug'), (500, 'stable-debug'), (500, 'proposed-updates-debug'), (500, 
'proposed-updates'), (500, 'oldstable-proposed-updates-debug'), (500, 
'oldstable-proposed-updates'), (500, 'oldoldstable'), (500, 'buildd-unstable'), 
(500, 'unstable'), (500, 'stable'), (500, 'oldstable'), (1, 
'experimental-debug'), (1, 'buildd-experimental'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 5.2.0 (SMP w/8 CPU cores)
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), 
LANGUAGE=fr_FR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
--- End Message ---
--- Begin Message ---
We believe that the bug you reported is now fixed; the following
package(s) have been removed from unstable:

python-strongwind |0.9-2.1 | all
strongwind |0.9-2.1 | source

--- Reason ---
RoQA; dead upstream; python2-only; last MU in 2012
--

Note that the package(s) have simply been removed from the tag
database and may (or may not) still be in the pool; this is not a bug.
The package(s) will be physically removed automatically when no suite
references them (and in the case of source, when no binary references
it).  Please also remember that the changes have been done on the
master archive and will not propagate to any mirrors until the next
dinstall run at the earliest.

Packages are usually not removed from testing by hand. Testing tracks
unstable and will automatically remove packages which were removed
from unstable when removing them from testing causes no dependency
problems. The release team can force a removal from testing if it is
really needed, please contact them if this should be the case.

We try to close bugs which have been reported against this package
automatically. But please check all old bugs, if they were closed
correctly or should have been re-assigned to another package.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 933...@bugs.debian.org.

The full log for this bug can be viewed at https://bugs.debian.org/933932

This message was generated automatically; if you believe that there is
a problem with it please contact the archive administrators by mailing
ftpmas...@ftp-master.debian.org.

Debian distribution maintenance software
pp.
Scott Kitterman (the ftpmaster behind the curtain)--- End Message ---


Bug#944995: gtkimageview FTBFS: error: ‘GTypeDebugFlags’ is deprecated

2019-11-17 Thread Helmut Grohne
Source: gtkimageview
Version: 1.6.4+dfsg-2
Severity: serious
Tags: ftbfs

gtkimageview fails to cross build from source in unstable. The crucial
bit is:

| /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: error: ‘GTypeDebugFlags’ is 
deprecated [-Werror=deprecated-declarations]
|   236 | voidgtk_type_init   (GTypeDebugFlagsdebug_flags);
|   | ^~~~

This is a problem, because gtkimageview builds with -Werror.

Reproducible by reproducible builds:
https://tests.reproducible-builds.org/debian/rbuild/unstable/amd64/gtkimageview_1.6.4+dfsg-2.rbuild.log.gz
Reproducible by crossqa:
http://crossqa.debian.net/build/gtkimageview_1.6.4+dfsg-2_ppc64el_20191014234854.log

As a first measure, dropping -Werror will likely make it build again,
then you likely need to fix #618962 and drop the gtk2 variant.

Helmut



Bug#944768: marked as done (gnome-shell-extension-hijra: Uninstallable)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Mon, 18 Nov 2019 02:58:46 +
with message-id <5dd208e6a85ae_3b02ac60b1dd0d441...@godard.mail>
and subject line Bug#944768 fixed in hijra
has caused the Debian Bug report #944768,
regarding gnome-shell-extension-hijra: Uninstallable
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
944768: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944768
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: hijra
Version: 0.4.1-2
X-Debugs-CC: aelmahmo...@users.sourceforge.net
Severity: serious

gnome-shell-extension-hijra depends on gnome-shell (<< 3.31) but
Debian Testing has gnome-shell 3.34.

The extension looks simple enough that I think you could probably drop
the upper dependency limit to avoid this issue every 6 months when we
package a new gnome-shell version. I was unable to test this extension
because of https://bugs.debian.org/944767

Thanks,
Jeremy Bicha
--- End Message ---
--- Begin Message ---
Hello,

Bug #944768 in hijra reported by you has been fixed in the Git repository.
You can see the commit message below and you can check the diff of the fix at:

https://salsa.debian.org/islamic-team/hijra/commit/30533c40bcf6b252abdc9f6649e3a441b8226216


Drop gnome-shell upper limit dependency

Closes: #944768


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/944768--- End Message ---


Bug#944768: marked as pending in hijra

2019-11-17 Thread أحمد المحمودي
Control: tag -1 pending

Hello,

Bug #944768 in hijra reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/islamic-team/hijra/commit/30533c40bcf6b252abdc9f6649e3a441b8226216


Drop gnome-shell upper limit dependency

Closes: #944768


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/944768



Processed: Bug#944768 marked as pending in hijra

2019-11-17 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #944768 {Done: أحمد المحمودي } [src:hijra] 
gnome-shell-extension-hijra: Uninstallable
Added tag(s) pending.

-- 
944768: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944768
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#944939: marked as done (pyfribidi: needs an explicit build dependency on dh-python)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Mon, 18 Nov 2019 02:56:12 +
with message-id 
and subject line Bug#944939: fixed in pyfribidi 0.12.0+repack-3
has caused the Debian Bug report #944939,
regarding pyfribidi: needs an explicit build dependency on dh-python
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
944939: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944939
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:pyfribidi
Version: 0.12.0+repack-2
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.
--- End Message ---
--- Begin Message ---
Source: pyfribidi
Source-Version: 0.12.0+repack-3

We believe that the bug you reported is fixed in the latest version of
pyfribidi, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 944...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
أحمد المحمودي (Ahmed El-Mahmoudy)  (supplier 
of updated pyfribidi package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Mon, 18 Nov 2019 03:05:21 +0100
Source: pyfribidi
Binary: python3-pyfribidi
Architecture: source
Version: 0.12.0+repack-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Modules Team 

Changed-By: أحمد المحمودي (Ahmed El-Mahmoudy) 

Description:
 python3-pyfribidi - FriBidi Python bindings
Closes: 944939
Changes:
 pyfribidi (0.12.0+repack-3) unstable; urgency=medium
 .
   [ Ondřej Nový ]
   * Use debhelper-compat instead of debian/compat.
   * Bump Standards-Version to 4.4.1.
 .
   [ أحمد المحمودي (Ahmed El-Mahmoudy) ]
   * Add Rules-Requires-Root: no
   * Add dh-python to build deps (Closes: #944939)
Checksums-Sha1:
 1f21530bb51b028a9fc152177ddc405054998ecf 1946 pyfribidi_0.12.0+repack-3.dsc
 21c416c5b3b5a2e86f2931b2cc98bdcf0c704ec1 4588 
pyfribidi_0.12.0+repack-3.debian.tar.xz
 852d58dfb9e6560796ec2d2d71fd435928cbef76 4957 
pyfribidi_0.12.0+repack-3_source.buildinfo
Checksums-Sha256:
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pyfribidi_0.12.0+repack-3.dsc
 81acd7a2881ae414429db892adc46c432829a5c9a657da292230026841ae2ba7 4588 
pyfribidi_0.12.0+repack-3.debian.tar.xz
 f94cb2583017ecdbd4cf02556f45eb06abc086111a25c82f97cb6f1be81faea3 4957 
pyfribidi_0.12.0+repack-3_source.buildinfo
Files:
 72eb541d16954e6f35e5eec19cc3e6e3 1946 python optional 
pyfribidi_0.12.0+repack-3.dsc
 6340995b4b17a52013e6fa4207f2c214 4588 python optional 
pyfribidi_0.12.0+repack-3.debian.tar.xz
 f43992fe949066a40fca5b84085f3044 4957 python optional 
pyfribidi_0.12.0+repack-3_source.buildinfo

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Bug#944993: gnome-shell-extension-show-ip: primary-interface patch broke loading the extension

2019-11-17 Thread Paul Wise
Package: gnome-shell-extension-show-ip
Version: 8-4
Severity: serious
Tags: patch

The primary-interface patch I proposed had a serious issue:

JS ERROR: Extension show...@sgaraud.github.com: ReferenceError: device is not 
defined

I've fixed the issue upstream and in the attached patch.

-- System Information:
Debian Release: bullseye/sid
  APT prefers testing-debug
  APT policy: (900, 'testing-debug'), (900, 'testing'), (800, 
'unstable-debug'), (800, 'unstable'), (790, 'buildd-unstable'), (700, 
'experimental-debug'), (700, 'experimental'), (690, 'buildd-experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 5.3.0-2-amd64 (SMP w/4 CPU cores)
Kernel taint flags: TAINT_FIRMWARE_WORKAROUND, TAINT_OOT_MODULE, 
TAINT_UNSIGNED_MODULE
Locale: LANG=en_AU.utf8, LC_CTYPE=en_AU.utf8 (charmap=UTF-8), LANGUAGE=en_AU:en 
(charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages gnome-shell-extension-show-ip depends on:
ii  gnome-shell  3.34.1+git20191024-1

gnome-shell-extension-show-ip recommends no packages.

gnome-shell-extension-show-ip suggests no packages.

-- no debconf information

-- 
bye,
pabs

https://wiki.debian.org/PaulWise
From 626ff48b7e29cf4178a2f439b85340e7b1e25774 Mon Sep 17 00:00:00 2001
From: Paul Wise 
Date: Thu, 2 Mar 2017 18:07:14 +0800
Subject: [PATCH] Show the primary IP address when no interface was chosen

Makes it easier to see all IP addresses at a glance.

Uses NM to get which interface(s) are in the default route.
---
 README.md|  1 +
 extension.js | 53 +---
 2 files changed, 43 insertions(+), 11 deletions(-)

diff --git a/README.md b/README.md
index 0fafb7a..eec47e3 100644
--- a/README.md
+++ b/README.md
@@ -83,6 +83,7 @@ issues](https://github.com/sgaraud/gnome-extension-show-ip/issues).
 ### License
 
 Copyright (C) 2015 Sylvain Garaud
+Copyright 2017 Paul Wise
 
 This program is free software: you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
diff --git a/extension.js b/extension.js
index d9a7940..5dc7d9a 100644
--- a/extension.js
+++ b/extension.js
@@ -3,6 +3,7 @@
  * https://github.com/sgaraud/gnome-extension-show-ip
  * 
  * Copyright (C) 2015 Sylvain Garaud
+ * Copyright 2017 Paul Wise
  *
  * This file is part of Show-IP GNOME extension.
  * Show IP GNOME extension is free software: you can redistribute it and/or modify
@@ -170,17 +171,30 @@ const IpMenuBase = new Lang.Class({
 }
 });
 
+this._getPrimaryDevices(this.client);
+let selectedIp = '';
+let primaryIp = '';
+let firstIp = '';
 for (let device of this._devices) {
-if (device.ifc == this.selectedDevice) {
-if (Schema.get_boolean("menu")) {
-this.label.set_text(_("IP: %s").format(device.ip));
-} else {
-this.label.set_text(device.ip);
-}
-break;
+if (!selectedIp && device.ifc == this.selectedDevice) {
+selectedIp = device.ip;
+}
+if (!primaryIp && device.primary) {
+primaryIp = device.ip;
+}
+if (!firstIp) {
+firstIp = device.ip;
 }
 }
-if ('' == this.selectedDevice) {
+let ip = selectedIp ? selectedIp : primaryIp ? primaryIp : firstIp;
+if (ip) {
+if (Schema.get_boolean("menu")) {
+this.label.set_text(_("IP: %s").format(ip));
+} else {
+this.label.set_text(ip);
+}
+this.label.set_text(ip);
+} else {
 this.label.set_text(NOT_CONNECTED);
 }
 },
@@ -207,6 +221,26 @@ const IpMenuBase = new Lang.Class({
 this._createPopupMenu();
 },
 
+_getPrimaryDevices: function (nmc) {
+let primary_conn = nmc.get_primary_connection();
+let primary_devices = primary_conn.get_devices();
+let primary_ifcs = [];
+let i = 0;
+if (primary_devices) {
+for (let device of primary_devices) {
+primary_ifcs[i++] = device.get_iface();
+}
+}
+for (let device of this._devices) {
+device.primary = false;
+for (let ifc of primary_ifcs) {
+if (device.ifc == ifc) {
+device.primary = true;
+}
+}
+}
+},
+
 _getNetworkDevices: function (nmc) {
 let _device;
 this.devices = nmc.get_devices();
@@ -290,9 +324,6 @@ const IpMenuBase = new Lang.Class({
 } else {
 device.ip = this._decodeIp4(ipadd);
 }
-if ('' == this.selectedDevice) {
-this.selectedDevice = device.ifc;
-}
 break;
 

Processed: Bug#944767 marked as pending in hijra

2019-11-17 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #944767 {Done: أحمد المحمودي } [src:hijra] 
python3-hijra: uninstallable
Added tag(s) pending.

-- 
944767: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944767
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#944792: marked as pending in hijra

2019-11-17 Thread أحمد المحمودي
Control: tag -1 pending

Hello,

Bug #944792 in hijra reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/islamic-team/hijra/commit/c841882a6b1f0780b894fec37173f92dfc0d168d


Add Breaks+Replaces: python-hijra

Closes: #944792


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/944792



Bug#944767: marked as pending in hijra

2019-11-17 Thread أحمد المحمودي
Control: tag -1 pending

Hello,

Bug #944767 in hijra reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/islamic-team/hijra/commit/d8d18cbf77daae0f692513b39983db3c721c68fc


Fix indentation inpy3.diff patch

Closes: #944767


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/944767



Bug#944767: marked as done (python3-hijra: uninstallable)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Mon, 18 Nov 2019 02:47:27 +
with message-id <5dd2063f64dd4_3b02ac60b1dd0d441...@godard.mail>
and subject line Bug#944767 fixed in hijra
has caused the Debian Bug report #944767,
regarding python3-hijra: uninstallable
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
944767: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944767
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: hijra
Version: 0.4.1-2
X-Debbugs-CC: aelmahmo...@users.sourceforge.net
Severity: grave


python3-hijra is uninstallable:

Setting up python3-hijra (0.4.1-2) ...
Sorry: TabError: inconsistent use of tabs and spaces in indentation
(HijriCal.py, line 83)
dpkg: error processing package python3-hijra (--configure):
 installed python3-hijra package post-installation script subprocess
returned error exit status 1
dpkg: dependency problems prevent configuration of hijra-applet:
 hijra-applet depends on python3-hijra (= 0.4.1-2); however:
  Package python3-hijra is not configured yet.


See the mention of line 83 in the log excerpt I posted.

Thanks,
Jeremy Bicha
--- End Message ---
--- Begin Message ---
Hello,

Bug #944767 in hijra reported by you has been fixed in the Git repository.
You can see the commit message below and you can check the diff of the fix at:

https://salsa.debian.org/islamic-team/hijra/commit/d8d18cbf77daae0f692513b39983db3c721c68fc


Fix indentation inpy3.diff patch

Closes: #944767


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/944767--- End Message ---


Bug#944792: marked as done (python3-hijra: missing Breaks+Replaces: python-hijra)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Mon, 18 Nov 2019 02:47:27 +
with message-id <5dd2063f4c539_3b02ac60b1dd0d441...@godard.mail>
and subject line Bug#944792 fixed in hijra
has caused the Debian Bug report #944792,
regarding python3-hijra: missing Breaks+Replaces: python-hijra
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
944792: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944792
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: python3-hijra
Version: 0.4.1-2
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'stable'.
It installed fine in 'stable', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

This test intentionally skipped 'testing' to find file overwrite
problems before packages migrate from 'unstable' to 'testing'.

>From the attached log (scroll to the bottom...):

  Selecting previously unselected package python3-hijra.
  Preparing to unpack .../python3-hijra_0.4.1-2_all.deb ...
  Unpacking python3-hijra (0.4.1-2) ...
  dpkg: error processing archive 
/var/cache/apt/archives/python3-hijra_0.4.1-2_all.deb (--unpack):
   trying to overwrite '/usr/share/doc/python-hijra/readme-ar.html', which is 
also in package python-hijra 0.4.1-1
  Errors were encountered while processing:
   /var/cache/apt/archives/python3-hijra_0.4.1-2_all.deb


cheers,

Andreas


python-hijra=0.4.1-1_python3-hijra=0.4.1-2.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Hello,

Bug #944792 in hijra reported by you has been fixed in the Git repository.
You can see the commit message below and you can check the diff of the fix at:

https://salsa.debian.org/islamic-team/hijra/commit/c841882a6b1f0780b894fec37173f92dfc0d168d


Add Breaks+Replaces: python-hijra

Closes: #944792


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/944792--- End Message ---


Processed: Bug#944792 marked as pending in hijra

2019-11-17 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #944792 {Done: أحمد المحمودي } [python3-hijra] 
python3-hijra: missing Breaks+Replaces: python-hijra
Added tag(s) pending.

-- 
944792: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944792
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#944939: marked as pending in pyfribidi

2019-11-17 Thread أحمد المحمودي
Control: tag -1 pending

Hello,

Bug #944939 in pyfribidi reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/python-team/modules/pyfribidi/commit/da7643395ee585683922d21692723fddf7ad969b


Add dh-python to build deps

Closes: #944939


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/944939



Processed: Bug#944939 marked as pending in pyfribidi

2019-11-17 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #944939 [src:pyfribidi] pyfribidi: needs an explicit build dependency on 
dh-python
Added tag(s) pending.

-- 
944939: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944939
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: Bug#944947 marked as pending in python-uinput

2019-11-17 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #944947 [src:python-uinput] python-uinput: needs an explicit build 
dependency on dh-python
Added tag(s) pending.

-- 
944947: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944947
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#944947: marked as pending in python-uinput

2019-11-17 Thread أحمد المحمودي
Control: tag -1 pending

Hello,

Bug #944947 in python-uinput reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/python-team/modules/python-uinput/commit/1cbe43fea993838d6997d5e29d59524dd6ec77cf


Add dh-python to build deps

Closes: #944947


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/944947



Processed: affects 923347

2019-11-17 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> affects 923347 src:mysql-workbench
Bug #923347 [src:mysql-connector-python] No sensible security support due to 
Oracle's policies
Added indication that 923347 affects src:mysql-workbench
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
923347: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=923347
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: tagging 943961

2019-11-17 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 943961 + pending
Bug #943961 [src:ceph] ceph: autopkgtest needs update for new version of 
python3.7: deprecation warning
Added tag(s) pending.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
943961: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=943961
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: tagging 936282

2019-11-17 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 936282 + pending
Bug #936282 [src:ceph] ceph: Python2 removal in sid/bullseye
Added tag(s) pending.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
936282: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=936282
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#942901: [Pkg-privacy-maintainers] Bug#942901: Bug#942901: torbrowser-launcher: Tor Browser 9.0 shows only black screens due to no write access to /dev/shm/org.mozilla.ipc.*.*

2019-11-17 Thread intrigeri
Hi,

Antoine Beaupré:
> I also had to add:

> owner @{torbrowser_home_dir}/updater ix,

FWIW, this one is fixed in upstream Git (too):
https://github.com/micahflee/torbrowser-launcher/pull/442



Bug#944044: marked as done (python-xarray migrated to testing despite 2313 failing tests)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 20:45:04 +
with message-id 
and subject line Bug#944044: fixed in python-xarray 0.14.0-2
has caused the Debian Bug report #944044,
regarding python-xarray migrated to testing despite 2313 failing tests
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
944044: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944044
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---

Package: src:python-xarray
Version: 0.14.0-1
Severity: serious
Tags: sid bullseye

Despite the autopkg test regressions mentioned in #935455, python-xarray 
migrated to testing due to a britney bug. In the autopkg test now 2313 test 
cases fail.  That's apparently also known upstream, and afaik there is a new 
release being prepared. I tried to address some of these issues:


Pulling two issues

http://launchpadlibrarian.net/449475370/python-xarray_0.14.0-1_0.14.0-1ubuntu1.diff.gz
http://launchpadlibrarian.net/449494504/python-xarray_0.14.0-1ubuntu1_0.14.0-1ubuntu2.diff.gz

get's down the number of test failures to 150

while pulling in the whole trunk/brunch gets it up again to 
http://launchpadlibrarian.net/449597034/python-xarray_0.14.0-1ubuntu2_0.14.0-1ubuntu3.diff.gz


I'm not tagging this as a patch, it's not getting the autopkg tests pass again.
--- End Message ---
--- Begin Message ---
Source: python-xarray
Source-Version: 0.14.0-2

We believe that the bug you reported is fixed in the latest version of
python-xarray, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 944...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Alastair McKinstry  (supplier of updated python-xarray 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 17 Nov 2019 18:32:58 +
Source: python-xarray
Architecture: source
Version: 0.14.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Alastair McKinstry 
Closes: 944044
Changes:
 python-xarray (0.14.0-2) unstable; urgency=medium
 .
   [ Matthias Klose ]
   * Fix test failures with new cftime 1.0.4, taken from upstream.
   * _get_scheduler() exception if dask.multiprocessing missing, taken
 from upstream.
 .
   [ Alastair McKinstry ]
   * xfail-dask.patch: Dask version in Debian is < 2.
 Label some functionality XFAIL, set dask='allowed' rather than
 'parallelize' where possible for the rest
   * xfail-rasterio.patch: Disable tests due to issue in rasterio:
 "WarpedVRT does not permit boundless reads".
 Closes: #944044
Checksums-Sha1:
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Checksums-Sha256:
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python-xarray_0.14.0-2.dsc
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python-xarray_0.14.0-2.debian.tar.xz
Files:
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python-xarray_0.14.0-2.dsc
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python-xarray_0.14.0-2.debian.tar.xz

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Bug#944949: dbus-python: needs an explicit build dependency on dh-python

2019-11-17 Thread Simon McVittie
Control: tags 944949 + moreinfo

On Sun, 17 Nov 2019 at 19:07:39 +, Matthias Klose wrote:
> Please add an explicit build dependency on dh-python.

As far as I can see it's been explicit since 2015. Is anything more
needed here?

Note that the FTBFS with

dh_python2
make[1]: dh_python2: Command not found

seems to be because /usr/bin/dh_python2 is a #!/usr/bin/python script in
a package that doesn't depend on python (#944894). The misleading
"Command not found" is similar to this:

$ cat > Makefile
all:
./script
$ cat > script
#!/usr/bin/does-not-exist
$ chmod +x script
$ make
./script
make: ./script: Command not found
make: *** [Makefile:2: all] Error 127

I have a workaround which I believe should still be harmless after
dh_python2 moves out of python2 (presumably into dh-python?), which I'll
upload soon.

If that doesn't work, I'll temporarily re-add the python B-D so the
python3.8 transition can go through, and remove it after #944894 is
resolved.

It's unfortunate that the python3.8 transition, the effort to replace
references to python2 with python, and the migration of dh_python2 from
python2 to dh-python (?) are happening at the same time and affect
overlapping sets of packages. Perhaps one (or more) of these could be
deferred until one of the others has been done?

smcv



Processed: Re: Bug#944949: dbus-python: needs an explicit build dependency on dh-python

2019-11-17 Thread Debian Bug Tracking System
Processing control commands:

> tags 944949 + moreinfo
Bug #944949 [src:dbus-python] dbus-python: needs an explicit build dependency 
on dh-python
Added tag(s) moreinfo.

-- 
944949: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944949
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#838994: Bug#891493: Bug#838994: Bug#891493: unresolved gtk2-engines-murrine situation (was: numix-gtk-theme: Undocumented and very likely also broken Breaks against murrine-themes since 2.6.7-2)

2019-11-17 Thread Yves-Alexis Perez
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

On Sun, 2019-11-17 at 11:00 +, Mike Gabriel wrote:
> If you plan to drop maintenance sooner or later anyway, then please  
> state that asap (packages are in deferred-15 from today again), so  
> that I can change the uploads and make these bugs go away without  
> introducing a virtual package.

Let's be realistic, I won't have time / priority for those themes, so I'm ok
with dropping maintenance even right now. So go ahead with your preferred
plan.

Regards,
- -- 
Yves-Alexis
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Bug#944943: marked as done (python-freecontact: needs an explicit build dependency on dh-python)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 20:33:24 +0100
with message-id <6170feb4-c526-2e38-8aaa-ff1aaa800...@debian.org>
and subject line Re: Bug#944943: python-freecontact: needs an explicit build 
dependency on dh-python
has caused the Debian Bug report #944943,
regarding python-freecontact: needs an explicit build dependency on dh-python
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
944943: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944943
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:python-freecontact
Version: 1.1-5
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.
--- End Message ---
--- Begin Message ---
On 17.11.19 20:27, Andreas Tille wrote:
> Control: tags -1 moreinfo
> 
> Hi Matthias,
> 
> On Sun, Nov 17, 2019 at 07:07:32PM +, Matthias Klose wrote:
>> Package: src:python-freecontact
>> Version: 1.1-5
>> Severity: serious
>> Tags: sid bullseye
>>
>> python3-all and python3-dev now dropped the dependency on
>> dh-python:
>>
>> [ Piotr Ożarowski ]
>>* Remove dh-python dependency from python3-all and python3-dev packages.
>>  Packages should build depend on dh-python or dh-sequence-python3 
>> instead.
> 
> The package Build-Depends from dh-python since 1.1-5
> 
>https://packages.debian.org/source/unstable/python-freecontact
> 
> Kind regards

that bug was wrong. just needs given back after boost is built for 3.8.--- End Message ---


Bug#944894: /usr/bin/dh_python2: is a #!/usr/bin/python script but does not depend on python

2019-11-17 Thread Matthias Klose
On 17.11.19 13:29, Simon McVittie wrote:
> Package: python2
> Version: 2.7.17-1
> Severity: serious
> File: /usr/bin/dh_python2
> Justification: Policy 3.5
> Control: affects -1 src:dbus-python
> 
> As instructed by the py2removal mass-bug-filing templates, I have been
> removing references to python from packages I maintain, and replacing them
> with references to python2 if the Python 2 modules are still needed.
> 
> This seems to have caused dbus-python to FTBFS when NMU'd for the python3.8
> transition:
> 
> https://buildd.debian.org/status/fetch.php?pkg=dbus-python=amd64=1.2.12-1%2Bb1=1573984727=0
>> Unpacking python2 (2.7.17-1) ...
> ...
>> Unpacking dh-python (4.20191017) ...
> ...
>>debian/rules override_dh_python2
>> make[1]: Entering directory '/<>'
>> py3versions: no X-Python3-Version in control file, using supported versions
>> dh_python2
>> make[1]: dh_python2: Command not found
>> make[1]: *** [debian/rules:214: override_dh_python2] Error 127
> 
> /usr/bin/dh_python2 is in the python2 binary package, which is
> installed, so this "command not found" shouldn't be caused by absence
> of /usr/bin/dh_python2.
> 
> As far as I can work out, it's actually caused by the absence of
> the interpreter named in its first line, which is /usr/bin/python
> (shells do not make it easy to distinguish between these two
> failure modes). dbus-python no longer build-depends on python, so
> /usr/bin/python2.7 and /usr/bin/python2 exist in the build environment,
> but /usr/bin/python does not.
> 
> I think /usr/bin/dh_python2 should now be a #!/usr/bin/python2 (or maybe
> #!/usr/bin/python2.7) script, instead of a #!/usr/bin/python script.

the VCS already has the pending fix to remove dh_python2 from python2.



Processed: Re: Bug#944943: python-freecontact: needs an explicit build dependency on dh-python

2019-11-17 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 moreinfo
Bug #944943 [src:python-freecontact] python-freecontact: needs an explicit 
build dependency on dh-python
Added tag(s) moreinfo.

-- 
944943: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944943
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#944943: python-freecontact: needs an explicit build dependency on dh-python

2019-11-17 Thread Andreas Tille
Control: tags -1 moreinfo

Hi Matthias,

On Sun, Nov 17, 2019 at 07:07:32PM +, Matthias Klose wrote:
> Package: src:python-freecontact
> Version: 1.1-5
> Severity: serious
> Tags: sid bullseye
> 
> python3-all and python3-dev now dropped the dependency on
> dh-python:
> 
> [ Piotr Ożarowski ]
>* Remove dh-python dependency from python3-all and python3-dev packages.
>  Packages should build depend on dh-python or dh-sequence-python3 instead.

The package Build-Depends from dh-python since 1.1-5

   https://packages.debian.org/source/unstable/python-freecontact

Kind regards

 Andreas.

-- 
http://fam-tille.de



Bug#944936: minieigen: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:minieigen
Version: 0.50.3+dfsg1-8
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944939: pyfribidi: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:pyfribidi
Version: 0.12.0+repack-2
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944946: python-fuse: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:python-fuse
Version: 2:1.0.0-1
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944938: ltt-control: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:ltt-control
Version: 2.11.0-2
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944934: cracklib2: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:cracklib2
Version: 2.9.6-3
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944947: python-uinput: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:python-uinput
Version: 0.11.2-2
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944945: python-scrypt: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:python-scrypt
Version: 0.8.0-0.2
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944942: python-ssdeep: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:python-ssdeep
Version: 3.1+dfsg-2.1
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944935: deltarpm: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:deltarpm
Version: 3.6+dfsg-1
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944949: dbus-python: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:dbus-python
Version: 1.2.12-1
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944943: python-freecontact: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:python-freecontact
Version: 1.1-5
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944944: python-kyotocabinet: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:python-kyotocabinet
Version: 1.22-2
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944948: tnetstring: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:tnetstring
Version: 0.3.1-2
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944940: python-ethtool: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:python-ethtool
Version: 0.14-1
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944941: pykerberos: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:pykerberos
Version: 1.1.14-2
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944937: py-postgresql: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:py-postgresql
Version: 1.2.1+git20180803.ef7b9a9-1
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#944933: babeltrace: needs an explicit build dependency on dh-python

2019-11-17 Thread Matthias Klose
Package: src:babeltrace
Version: 1.5.7-1
Severity: serious
Tags: sid bullseye

python3-all and python3-dev now dropped the dependency on
dh-python:

[ Piotr Ożarowski ]
   * Remove dh-python dependency from python3-all and python3-dev packages.
 Packages should build depend on dh-python or dh-sequence-python3 instead.

Please add an explicit build dependency on dh-python.



Bug#942901: [Pkg-privacy-maintainers] Bug#942901: torbrowser-launcher: Tor Browser 9.0 shows only black screens due to no write access to /dev/shm/org.mozilla.ipc.*.*

2019-11-17 Thread Antoine Beaupré
On 2019-10-23 09:41:51, Paul Wise wrote:
> Package: torbrowser-launcher
> Version: 0.3.2-2
> Severity: serious
>
> Tor Browser 9.0 shows only black screens because the default apparmor
> profile does not allow write access to /dev/shm/org.mozilla.ipc.*.*
> like it does for /dev/shm/org.chromium.* and I was able to fix this
> issue by adding this workaround:
>
> ==> /etc/apparmor.d/local/torbrowser.Browser.firefox <==
> owner /{dev,run}/shm/org.mozilla.*.* rw,

I also had to add:

owner @{torbrowser_home_dir}/updater ix,

and restart apparmor:

service apparmor restart

anyone working on uploading a fix for this?
-- 
No animal has more liberty than the cat; but it buries the mess it
makes. The cat is the best anarchist. Until they learn that from the cat
I cannot respect them.
- For whom the bell tolls, Ernest Hemingway



Bug#943705: dh_installman: man-recode integration gets confused if both foo.1 and foo.1.gz exist

2019-11-17 Thread Niels Thykier
Colin Watson:
> Package: debhelper
> Version: 12.7.1
> Severity: important
> 
> rumur FTBFS with debhelper 12.7.1 and man-db 2.9.0-1.  Running the
> binary target manually with DH_VERBOSE=1, I see the following at the
> end:
> 
>  [...]
> 

Hi Colin,

Thanks for filing this bug.

I think you have spotted a case of (unintentional) undefined behaviour
in debhelper.

> [...]
> 
> Of course, rumur could easily work around this by removing
> debian/rumur.manpages, but I assume debhelper doesn't want to create
> this kind of regression.  Before man-recode existed, the net effect
> would have been that only the last of a group of files that differ only
> by compression extension is considered.  For compatibility purposes, I
> think the logic in reencode_manpages will need to be adjusted to
> preserve this property.
> 
> Thanks,
> 

Rather, I would argue that the result is "it depends(tm)".  Your
statement is true only when @manpages_to_reencode is constructed
deterministically AND when the conflicting definitions end up in the
same "parallelization bucket".  However:

 1) If the two conflicting definitions of the manpages end in different
buckets when calling "on_items_in_parallel", then all bets are off
and you get a standard race-condition.  In best case, you get "one"
of the input files - worst case, corrupted manpages.

 2) Even then, the construction of @manpages_to_reecode depends on the
order returned by filesystem (File::Find does not sort the result
readdir by default; this has to be done by the preprocess option)

 3) Even if the order in 2) is stable (but not sorted), the build
putting the files there may be unstable due to parallelism.

(prior to adding parallelization in 10.2.X, we "only" suffered from 2+3)

I think the proper solution here is to either pick a "winner"
deterministically OR reject the situation as a conflict and have the
packager sort out the issue.

I am learning towards the latter as a long term solution (compat 13) and
the former as a short term (current compat levels).
Suggestions/feedback welcome.

Thanks,
~Niels



Processed: reassign 931695 to src:libgit-raw-perl, forcibly merging 931695 944912, tagging 931695 ...

2019-11-17 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 931695 src:libgit-raw-perl 0.79-6
Bug #931695 [libgit-raw-perl] libgit-raw-perl: libgit2 0.28 transition
Bug reassigned from package 'libgit-raw-perl' to 'src:libgit-raw-perl'.
No longer marked as found in versions libgit-raw-perl/0.79-6.
Ignoring request to alter fixed versions of bug #931695 to the same values 
previously set
Bug #931695 [src:libgit-raw-perl] libgit-raw-perl: libgit2 0.28 transition
Marked as found in versions libgit-raw-perl/0.79-6.
> forcemerge 931695 944912
Bug #931695 [src:libgit-raw-perl] libgit-raw-perl: libgit2 0.28 transition
Bug #944912 [src:libgit-raw-perl] libgit-raw-perl: FBTFS: ./xs/Indexer.xs:14:8: 
error: too many arguments to function ‘git_indexer_new’
934927 was blocked by: 931695 931697 931693
934927 was not blocking any bugs.
Added blocking bug(s) of 934927: 944912
The source libgit-raw-perl and version 0.79-6+b2 do not appear to match any 
binary packages
Marked as found in versions libgit-raw-perl/0.79-6.
Added tag(s) bullseye and sid.
Bug #931695 [src:libgit-raw-perl] libgit-raw-perl: libgit2 0.28 transition
The source libgit-raw-perl and version 0.79-6+b2 do not appear to match any 
binary packages
Marked as found in versions libgit-raw-perl/0.79-6+b2.
Added tag(s) ftbfs.
Merged 931695 944912
> tags 931695 + ftbfs
Bug #931695 [src:libgit-raw-perl] libgit-raw-perl: libgit2 0.28 transition
Bug #944912 [src:libgit-raw-perl] libgit-raw-perl: FBTFS: ./xs/Indexer.xs:14:8: 
error: too many arguments to function ‘git_indexer_new’
Ignoring request to alter tags of bug #931695 to the same tags previously set
Ignoring request to alter tags of bug #944912 to the same tags previously set
> retitle 931695 libgit-raw-perl: FTBFS with libgit2 0.28
Bug #931695 [src:libgit-raw-perl] libgit-raw-perl: libgit2 0.28 transition
Bug #944912 [src:libgit-raw-perl] libgit-raw-perl: FBTFS: ./xs/Indexer.xs:14:8: 
error: too many arguments to function ‘git_indexer_new’
Changed Bug title to 'libgit-raw-perl: FTBFS with libgit2 0.28' from 
'libgit-raw-perl: libgit2 0.28 transition'.
Changed Bug title to 'libgit-raw-perl: FTBFS with libgit2 0.28' from 
'libgit-raw-perl: FBTFS: ./xs/Indexer.xs:14:8: error: too many arguments to 
function ‘git_indexer_new’'.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
931695: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=931695
934927: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=934927
944912: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944912
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#942789: marked as done (libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl: missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3))

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 15:49:44 +
with message-id 
and subject line Bug#942789: fixed in libbio-db-seqfeature-perl 1.7.3-2
has caused the Debian Bug report #942789,
regarding 
libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl:
 missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
942789: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=942789
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: 
libbio-db-biofetch-perl,libbio-db-gff-perl,libbio-db-seqfeature-perl,libbio-searchio-hmmer-perl,libbio-tools-run-remoteblast-perl
Version: 1.7.3-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

>From the attached log (scroll to the bottom...):

  Preparing to unpack .../libbio-db-biofetch-perl_1.7.3-1_all.deb ...
  Unpacking libbio-db-biofetch-perl (1.7.3-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb (--unpack):
   trying to overwrite '/usr/share/man/man3/Bio::DB::BioFetch.3pm.gz', which is 
also in package libbio-perl-perl 1.7.2-3
  Errors were encountered while processing:
   /var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb

The (<< 1.7.3) version constraint is based on my assumption that 1.7.3 split
up libbio-perl-perl into several independent source packages.


cheers,

Andreas


libbio-perl-perl=1.7.2-3_libbio-db-biofetch-perl=1.7.3-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: libbio-db-seqfeature-perl
Source-Version: 1.7.3-2

We believe that the bug you reported is fixed in the latest version of
libbio-db-seqfeature-perl, which is due to be installed in the Debian FTP 
archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 942...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe  (supplier of updated 
libbio-db-seqfeature-perl package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Source: libbio-db-seqfeature-perl
Architecture: source
Version: 1.7.3-2
Distribution: unstable
Urgency: medium
Maintainer: Michael R. Crusoe 
Changed-By: Michael R. Crusoe 
Closes: 942789
Changes:
 libbio-db-seqfeature-perl (1.7.3-2) unstable; urgency=medium
 .
   * debian/control: Breaks+Replaces the old libbio-bio-perl. (Closes: #942789)
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Bug#942789: marked as done (libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl: missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3))

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 15:49:38 +
with message-id 
and subject line Bug#942789: fixed in libbio-db-gff-perl 1.7.3-2
has caused the Debian Bug report #942789,
regarding 
libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl:
 missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
942789: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=942789
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: 
libbio-db-biofetch-perl,libbio-db-gff-perl,libbio-db-seqfeature-perl,libbio-searchio-hmmer-perl,libbio-tools-run-remoteblast-perl
Version: 1.7.3-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

>From the attached log (scroll to the bottom...):

  Preparing to unpack .../libbio-db-biofetch-perl_1.7.3-1_all.deb ...
  Unpacking libbio-db-biofetch-perl (1.7.3-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb (--unpack):
   trying to overwrite '/usr/share/man/man3/Bio::DB::BioFetch.3pm.gz', which is 
also in package libbio-perl-perl 1.7.2-3
  Errors were encountered while processing:
   /var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb

The (<< 1.7.3) version constraint is based on my assumption that 1.7.3 split
up libbio-perl-perl into several independent source packages.


cheers,

Andreas


libbio-perl-perl=1.7.2-3_libbio-db-biofetch-perl=1.7.3-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: libbio-db-gff-perl
Source-Version: 1.7.3-2

We believe that the bug you reported is fixed in the latest version of
libbio-db-gff-perl, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 942...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe  (supplier of updated 
libbio-db-gff-perl package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Source: libbio-db-gff-perl
Architecture: source
Version: 1.7.3-2
Distribution: unstable
Urgency: medium
Maintainer: Michael R. Crusoe 
Changed-By: Michael R. Crusoe 
Closes: 942789
Changes:
 libbio-db-gff-perl (1.7.3-2) unstable; urgency=medium
 .
   * debian/control: Breaks+Replaces the old libbio-bio-perl. (Closes: #942789)
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yt43ha94EqkmK/BA6HolfPftjra5Al4exBvZLB37yagmN1prS4SPFp2zRFrH/0Fa

Bug#942789: marked as done (libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl: missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3))

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 15:49:31 +
with message-id 
and subject line Bug#942789: fixed in libbio-db-biofetch-perl 1.7.3-2
has caused the Debian Bug report #942789,
regarding 
libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl:
 missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
942789: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=942789
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: 
libbio-db-biofetch-perl,libbio-db-gff-perl,libbio-db-seqfeature-perl,libbio-searchio-hmmer-perl,libbio-tools-run-remoteblast-perl
Version: 1.7.3-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

>From the attached log (scroll to the bottom...):

  Preparing to unpack .../libbio-db-biofetch-perl_1.7.3-1_all.deb ...
  Unpacking libbio-db-biofetch-perl (1.7.3-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb (--unpack):
   trying to overwrite '/usr/share/man/man3/Bio::DB::BioFetch.3pm.gz', which is 
also in package libbio-perl-perl 1.7.2-3
  Errors were encountered while processing:
   /var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb

The (<< 1.7.3) version constraint is based on my assumption that 1.7.3 split
up libbio-perl-perl into several independent source packages.


cheers,

Andreas


libbio-perl-perl=1.7.2-3_libbio-db-biofetch-perl=1.7.3-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: libbio-db-biofetch-perl
Source-Version: 1.7.3-2

We believe that the bug you reported is fixed in the latest version of
libbio-db-biofetch-perl, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 942...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe  (supplier of updated 
libbio-db-biofetch-perl package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Hash: SHA512

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Date: Tue, 29 Oct 2019 12:58:25 +0100
Source: libbio-db-biofetch-perl
Architecture: source
Version: 1.7.3-2
Distribution: unstable
Urgency: medium
Maintainer: Michael R. Crusoe 
Changed-By: Michael R. Crusoe 
Closes: 942789
Changes:
 libbio-db-biofetch-perl (1.7.3-2) unstable; urgency=medium
 .
   * debian/control: Breaks+Replaces the old libbio-bio-perl. (Closes: #942789)
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Bug#942789: marked as done (libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl: missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3))

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 15:49:57 +
with message-id 
and subject line Bug#942789: fixed in libbio-tools-run-remoteblast-perl 1.7.3-2
has caused the Debian Bug report #942789,
regarding 
libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl:
 missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
942789: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=942789
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: 
libbio-db-biofetch-perl,libbio-db-gff-perl,libbio-db-seqfeature-perl,libbio-searchio-hmmer-perl,libbio-tools-run-remoteblast-perl
Version: 1.7.3-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

>From the attached log (scroll to the bottom...):

  Preparing to unpack .../libbio-db-biofetch-perl_1.7.3-1_all.deb ...
  Unpacking libbio-db-biofetch-perl (1.7.3-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb (--unpack):
   trying to overwrite '/usr/share/man/man3/Bio::DB::BioFetch.3pm.gz', which is 
also in package libbio-perl-perl 1.7.2-3
  Errors were encountered while processing:
   /var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb

The (<< 1.7.3) version constraint is based on my assumption that 1.7.3 split
up libbio-perl-perl into several independent source packages.


cheers,

Andreas


libbio-perl-perl=1.7.2-3_libbio-db-biofetch-perl=1.7.3-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: libbio-tools-run-remoteblast-perl
Source-Version: 1.7.3-2

We believe that the bug you reported is fixed in the latest version of
libbio-tools-run-remoteblast-perl, which is due to be installed in the Debian 
FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 942...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe  (supplier of updated 
libbio-tools-run-remoteblast-perl package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Hash: SHA512

Format: 1.8
Date: Tue, 29 Oct 2019 13:56:50 +0100
Source: libbio-tools-run-remoteblast-perl
Architecture: source
Version: 1.7.3-2
Distribution: unstable
Urgency: medium
Maintainer: Michael R. Crusoe 
Changed-By: Michael R. Crusoe 
Closes: 942789
Changes:
 libbio-tools-run-remoteblast-perl (1.7.3-2) unstable; urgency=medium
 .
   * debian/control: Breaks+Replaces the old libbio-bio-perl. (Closes: #942789)
Checksums-Sha1:
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Bug#942789: marked as done (libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl: missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3))

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 15:49:51 +
with message-id 
and subject line Bug#942789: fixed in libbio-searchio-hmmer-perl 1.7.3-2
has caused the Debian Bug report #942789,
regarding 
libbio-{db-{biofetch,gff,seqfeature},searchio-hmmer,tools-run-remoteblast}-perl:
 missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
942789: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=942789
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: 
libbio-db-biofetch-perl,libbio-db-gff-perl,libbio-db-seqfeature-perl,libbio-searchio-hmmer-perl,libbio-tools-run-remoteblast-perl
Version: 1.7.3-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#overwriting-files-and-replacing-packages-replaces

>From the attached log (scroll to the bottom...):

  Preparing to unpack .../libbio-db-biofetch-perl_1.7.3-1_all.deb ...
  Unpacking libbio-db-biofetch-perl (1.7.3-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb (--unpack):
   trying to overwrite '/usr/share/man/man3/Bio::DB::BioFetch.3pm.gz', which is 
also in package libbio-perl-perl 1.7.2-3
  Errors were encountered while processing:
   /var/cache/apt/archives/libbio-db-biofetch-perl_1.7.3-1_all.deb

The (<< 1.7.3) version constraint is based on my assumption that 1.7.3 split
up libbio-perl-perl into several independent source packages.


cheers,

Andreas


libbio-perl-perl=1.7.2-3_libbio-db-biofetch-perl=1.7.3-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: libbio-searchio-hmmer-perl
Source-Version: 1.7.3-2

We believe that the bug you reported is fixed in the latest version of
libbio-searchio-hmmer-perl, which is due to be installed in the Debian FTP 
archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 942...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe  (supplier of updated 
libbio-searchio-hmmer-perl package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Hash: SHA512

Format: 1.8
Date: Tue, 29 Oct 2019 13:23:15 +0100
Source: libbio-searchio-hmmer-perl
Architecture: source
Version: 1.7.3-2
Distribution: unstable
Urgency: medium
Maintainer: Michael R. Crusoe 
Changed-By: Michael R. Crusoe 
Closes: 942789
Changes:
 libbio-searchio-hmmer-perl (1.7.3-2) unstable; urgency=medium
 .
   * Remove obsolete fields Name, Contact from debian/upstream/metadata.
   * Turn on the autopkgtests
   * debian/control: Breaks+Replaces the old libbio-bio-perl. (Closes:
 #942789)
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Bug#944912: libgit-raw-perl: FBTFS: ./xs/Indexer.xs:14:8: error: too many arguments to function ‘git_indexer_new’

2019-11-17 Thread Aurelien Jarno
Source: libgit-raw-perl
Version: 0.79-6+b2
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)

libgit-raw-perl fails to build from source:
| x86_64-linux-gnu-gcc -c  -I.  -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv 
-fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE 
-D_FILE_OFFSET_BITS=64  -Wall -Wno-unused-variable -g -O2 
-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 
-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -DVERSION=\"0.79\" 
-DXS_VERSION=\"0.79\" -fPIC "-I/usr/lib/x86_64-linux-gnu/perl/5.30/CORE"  
-DGIT_SSH -DNO_VIZ -DSTDC -DNO_GZIP -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE 
-DLIBGIT2_NO_FEATURES_H -DGIT_USE_STAT_MTIM -DGIT_USE_STAT_MTIM_NSEC 
-DGIT_USE_NEC -DGIT_THREADS Raw.c -o Raw.o
| In file included from Raw.xs:9:
| ppport.h:4594: warning: "WIDEST_UTYPE" redefined
|  4594 | #  define WIDEST_UTYPE U64TYPE
|   | 
| In file included from /usr/lib/x86_64-linux-gnu/perl/5.30/CORE/perl.h:2508,
|  from Raw.xs:2:
| /usr/lib/x86_64-linux-gnu/perl/5.30/CORE/handy.h:1072: note: this is the 
location of the previous definition
|  1072 | #   define WIDEST_UTYPE U64
|   | 
| ./xs/Indexer.xs: In function ‘XS_Git__Raw__Indexer_new’:
| ./xs/Indexer.xs:14:8: error: too many arguments to function ‘git_indexer_new’
|14 |   rc = git_indexer_new(, git_ensure_pv(path, "path"),
|   |^~~
| In file included from /usr/include/git2/index.h:11,
|  from /usr/include/git2/merge.h:15,
|  from /usr/include/git2/cherrypick.h:12,
|  from /usr/include/git2.h:19,
|  from Raw.xs:17:
| /usr/include/git2/indexer.h:57:17: note: declared here
|57 | GIT_EXTERN(int) git_indexer_new(
|   | ^~~
| make[1]: *** [Makefile:459: Raw.o] Error 1
| make[1]: Leaving directory '/<>'
| dh_auto_build: make -j4 returned exit code 2
| make: *** [debian/rules:4: binary-arch] Error 255
| dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit 
status 2

The full build log can be found there:
https://buildd.debian.org/fetch.php?pkg=libgit-raw-perl=amd64=0.79-6%2Bb2=1573942153=0



Bug#944911: libfiu: FBTFS: Found too many matching python3 bindings

2019-11-17 Thread Aurelien Jarno
Source: libfiu
Version: 1.00-3+b1
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)

libfiu fails to build from source:
| ./wrap-python 3 ./test-manyfps.py
| Found too many matching python3 bindingsmake[3]: *** [Makefile:96: 
py-run-test-manyfps] Error 1
| make[3]: *** Waiting for unfinished jobs
| make[4]: Leaving directory '/<>/tests/utils'
| parallel nc: 6372609   c: 8276708   e: 509422t: 15158739
| wildcard nc: 577000c: 599000e: 1566  t: 1177566
| rm test-enable_stack test-parallel-wildcard test-parallel test-ferror 
test-enable_stack_by_name
| make[3]: Leaving directory '/<>/tests'
| make[2]: *** [Makefile:58: test] Error 2
| make[2]: Leaving directory '/<>'
| dh_auto_test: make -j4 test V=1 LC_ALL=C returned exit code 2
| make[1]: *** [debian/rules:28: override_dh_auto_test] Error 255
| make[1]: Leaving directory '/<>'
| make: *** [debian/rules:12: build-arch] Error 2
| dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit 
status 2

The full build log can be found there:
https://buildd.debian.org/fetch.php?pkg=libfiu=amd64=1.00-3%2Bb1=1573820091=0



Bug#944898: marked as done (FTBFS: missing build-dependency python3-setuptools-scm)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 15:36:45 +
with message-id 
and subject line Bug#944898: fixed in python-dnaio 0.4.1-1
has caused the Debian Bug report #944898,
regarding FTBFS: missing build-dependency python3-setuptools-scm
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
944898: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944898
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---

Source: python-dnaio
Version: 0.4-1
Severity: serious

Dear Maintainer,

python-dnaio currently fails to build from source with the following 
error message:

No local packages or working download links found for setuptools_scm
Traceback (most recent call last):
  File "setup.py", line 86, in 
"Topic :: Scientific/Engineering :: Bio-Informatics"
  File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 
144, in setup

_install_setup_requires(attrs)
  File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 
139, in _install_setup_requires

dist.fetch_build_eggs(dist.setup_requires)
  File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 720, in 
fetch_build_eggs

replace_conflicting=True,
  File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 
782, in resolve

replace_conflicting=replace_conflicting
  File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 
1065, in best_match

return self.obtain(req, installer)
  File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 
1077, in obtain

return installer(requirement)
  File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 787, in 
fetch_build_egg

return cmd.easy_install(req)
  File 
"/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", 
line 698, in easy_install

raise DistutilsError(msg)
distutils.errors.DistutilsError: Could not find suitable distribution 
for Requirement.parse('setuptools_scm')
E: pybuild pybuild:341: clean: plugin distutils failed with: exit 
code=1: python3.7 setup.py clean


(see 
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/python-dnaio.html 
for more details)


After adding `python3-setuptools-scm` to build-depdendencies it built 
successfully in pbuilder on my local system.



-- System Information:
Debian Release: bullseye/sid
  APT prefers unstable
  APT policy: (500, 'unstable')
Architecture: amd64 (x86_64)

Kernel: Linux 5.3.0-2-amd64 (SMP w/3 CPU cores)
Locale: LANG=en_US.utf8, LC_CTYPE=en_US.utf8 (charmap=UTF-8), 
LANGUAGE=en_US:en (charmap=UTF-8)

Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled


--
mvh / best regards
Hans Joachim Desserud
http://desserud.orgdiff --git a/debian/control b/debian/control
index 50b63d5..703ce98 100644
--- a/debian/control
+++ b/debian/control
@@ -8,6 +8,7 @@ Build-Depends: debhelper-compat (= 12),
python3,
python3-dev,
python3-setuptools,
+   python3-setuptools-scm,
python3-pytest,
python3-xopen,
cython3
--- End Message ---
--- Begin Message ---
Source: python-dnaio
Source-Version: 0.4.1-1

We believe that the bug you reported is fixed in the latest version of
python-dnaio, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 944...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille  (supplier of updated python-dnaio package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 17 Nov 2019 16:18:47 +0100
Source: python-dnaio
Binary: python3-dnaio
Architecture: source
Version: 0.4.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 

Changed-By: Andreas Tille 
Description:
 python3-dnaio - Python 3 library for fast parsing of FASTQ and FASTA files
Closes: 944898
Changes:
 python-dnaio (0.4.1-1) unstable; urgency=medium
 .
   * Team upload.
   * Build-Depends: python3-setuptools-scm
 Closes: #944898
   * Set upstream metadata fields: Repository.
   * Remove obsolete fields Name from debian/upstream/metadata.
Checksums-Sha1:
 

Bug#937657: Issue with numpy under Python 3.8

2019-11-17 Thread Andreas Tille
Hi Graham,

On Sun, Nov 17, 2019 at 02:16:29PM +0200, Graham Inggs wrote:
> If you look on the numpy tracker page [1], you'll see there is a note:
> 
> "This package is part of the ongoing testing transition known as
> python3.8. Please avoid uploads unrelated to this transition, they
> would likely delay it and require supplementary work from the release
> managers."

I wonder in how far this is relevant to simply *build* a package.  I'm
trying to build python-colormap in a pbuilder chroot and it fails and I
wonder why.
 
> [1] https://tracker.debian.org/pkg/numpy

-- 
http://fam-tille.de



Bug#941920: marked as done (FTBFS intermittently on buildds ppc64el and amd64)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 14:45:18 +
with message-id 
and subject line Bug#941920: fixed in jellyfish 2.3.0-3
has caused the Debian Bug report #941920,
regarding FTBFS intermittently on buildds ppc64el and amd64
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
941920: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=941920
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: jellyfish
Version: 2.3.0-1
Tags: ftbfs
Severity: serious
Justification: fails to build from source (but built successfully in the past)
Control: block 935737 with -1

This package failed to build on ppc64el, but 2.2.10-2 in testing built
successfully.  So the failure is blocking testing migration.

See https://buildd.debian.org/status/logs.php?pkg=jellyfish=ppc64el

The migration status interferes with the ongoing Perl 5.30 transition,
so it may be necessary to remove this package from testing soon.
-- 
Niko Tyni   nt...@debian.org
--- End Message ---
--- Begin Message ---
Source: jellyfish
Source-Version: 2.3.0-3

We believe that the bug you reported is fixed in the latest version of
jellyfish, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 941...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe  (supplier of updated jellyfish 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Sun, 17 Nov 2019 14:23:43 +0100
Source: jellyfish
Architecture: source
Version: 2.3.0-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 

Changed-By: Michael R. Crusoe 
Closes: 941920
Changes:
 jellyfish (2.3.0-3) unstable; urgency=medium
 .
   * Upstream only supports AMD64 (Closes: #941920)
   * Use secure URI in Homepage field.
   * Set upstream metadata fields: Repository.
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Bug#944898: FTBFS: missing build-dependency python3-setuptools-scm

2019-11-17 Thread Hans Joachim Desserud

Source: python-dnaio
Version: 0.4-1
Severity: serious

Dear Maintainer,

python-dnaio currently fails to build from source with the following 
error message:

No local packages or working download links found for setuptools_scm
Traceback (most recent call last):
  File "setup.py", line 86, in 
"Topic :: Scientific/Engineering :: Bio-Informatics"
  File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 
144, in setup

_install_setup_requires(attrs)
  File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 
139, in _install_setup_requires

dist.fetch_build_eggs(dist.setup_requires)
  File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 720, in 
fetch_build_eggs

replace_conflicting=True,
  File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 
782, in resolve

replace_conflicting=replace_conflicting
  File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 
1065, in best_match

return self.obtain(req, installer)
  File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 
1077, in obtain

return installer(requirement)
  File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 787, in 
fetch_build_egg

return cmd.easy_install(req)
  File 
"/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", 
line 698, in easy_install

raise DistutilsError(msg)
distutils.errors.DistutilsError: Could not find suitable distribution 
for Requirement.parse('setuptools_scm')
E: pybuild pybuild:341: clean: plugin distutils failed with: exit 
code=1: python3.7 setup.py clean


(see 
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/python-dnaio.html 
for more details)


After adding `python3-setuptools-scm` to build-depdendencies it built 
successfully in pbuilder on my local system.



-- System Information:
Debian Release: bullseye/sid
  APT prefers unstable
  APT policy: (500, 'unstable')
Architecture: amd64 (x86_64)

Kernel: Linux 5.3.0-2-amd64 (SMP w/3 CPU cores)
Locale: LANG=en_US.utf8, LC_CTYPE=en_US.utf8 (charmap=UTF-8), 
LANGUAGE=en_US:en (charmap=UTF-8)

Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled


--
mvh / best regards
Hans Joachim Desserud
http://desserud.orgdiff --git a/debian/control b/debian/control
index 50b63d5..703ce98 100644
--- a/debian/control
+++ b/debian/control
@@ -8,6 +8,7 @@ Build-Depends: debhelper-compat (= 12),
python3,
python3-dev,
python3-setuptools,
+   python3-setuptools-scm,
python3-pytest,
python3-xopen,
cython3


Bug#944894: /usr/bin/dh_python2: is a #!/usr/bin/python script but does not depend on python

2019-11-17 Thread Simon McVittie
Package: python2
Version: 2.7.17-1
Severity: serious
File: /usr/bin/dh_python2
Justification: Policy 3.5
Control: affects -1 src:dbus-python

As instructed by the py2removal mass-bug-filing templates, I have been
removing references to python from packages I maintain, and replacing them
with references to python2 if the Python 2 modules are still needed.

This seems to have caused dbus-python to FTBFS when NMU'd for the python3.8
transition:

https://buildd.debian.org/status/fetch.php?pkg=dbus-python=amd64=1.2.12-1%2Bb1=1573984727=0
> Unpacking python2 (2.7.17-1) ...
...
> Unpacking dh-python (4.20191017) ...
...
>debian/rules override_dh_python2
> make[1]: Entering directory '/<>'
> py3versions: no X-Python3-Version in control file, using supported versions
> dh_python2
> make[1]: dh_python2: Command not found
> make[1]: *** [debian/rules:214: override_dh_python2] Error 127

/usr/bin/dh_python2 is in the python2 binary package, which is
installed, so this "command not found" shouldn't be caused by absence
of /usr/bin/dh_python2.

As far as I can work out, it's actually caused by the absence of
the interpreter named in its first line, which is /usr/bin/python
(shells do not make it easy to distinguish between these two
failure modes). dbus-python no longer build-depends on python, so
/usr/bin/python2.7 and /usr/bin/python2 exist in the build environment,
but /usr/bin/python does not.

I think /usr/bin/dh_python2 should now be a #!/usr/bin/python2 (or maybe
#!/usr/bin/python2.7) script, instead of a #!/usr/bin/python script.

Regards,
smcv



Complete list of package versions from sbuild log:

adduser_3.118
apt_1.8.4
apt-transport-https_1.8.4
autoconf_2.69-11
autoconf-archive_20190106-2
automake_1:1.16.1-4
autopoint_0.19.8.1-9
autotools-dev_20180224.1
base-files_11
base-passwd_3.5.46
bash_5.0-5
binutils_2.33.1-2
binutils-common_2.33.1-2
binutils-x86-64-linux-gnu_2.33.1-2
bsdmainutils_11.1.2+b1
bsdutils_1:2.34-0.1
build-essential_12.8
bzip2_1.0.8-2
ca-certificates_20190110
coreutils_8.30-3+b1
cpp_4:9.2.1-3.1
cpp-9_9.2.1-19
dash_0.5.10.2-6
dbus_1.12.16-2
debconf_1.5.73
debhelper_12.7.1
debian-archive-keyring_2019.1
debianutils_4.9
dh-autoreconf_19
dh-python_4.20191017
dh-strip-nondeterminism_1.6.2-1
diffutils_1:3.7-3
docbook-xml_4.5-9
docbook-xsl_1.79.1+dfsg-2
dpkg_1.19.7
dpkg-dev_1.19.7
dwz_0.13-2
e2fsprogs_1.45.4-1
fakeroot_1.24-1
fdisk_2.34-0.1
file_1:5.37-6
findutils_4.7.0-1
g++_4:9.2.1-3.1
g++-9_9.2.1-19
gcc_4:9.2.1-3.1
gcc-9_9.2.1-19
gcc-9-base_9.2.1-19
gettext_0.19.8.1-9
gettext-base_0.19.8.1-9
gir1.2-glib-2.0_1.62.0-2
gpgv_2.2.17-3
grep_3.3-1
groff-base_1.22.4-3
gzip_1.9-3+b1
hostname_3.23
init-system-helpers_1.57
intltool-debian_0.35.0+20060710.5
libacl1_2.2.53-5
libapparmor1_2.13.3-7
libapt-pkg5.0_1.8.4
libarchive-zip-perl_1.67-1
libasan5_9.2.1-19
libatomic1_9.2.1-19
libattr1_1:2.4.48-5
libaudit-common_1:2.8.5-2
libaudit1_1:2.8.5-2
libbinutils_2.33.1-2
libblkid-dev_2.34-0.1
libblkid1_2.34-0.1
libbsd0_0.10.0-1
libbz2-1.0_1.0.8-2
libc-bin_2.29-3
libc-dev-bin_2.29-3
libc6_2.29-3
libc6-dev_2.29-3
libcap-ng0_0.7.9-2.1
libcc1-0_9.2.1-19
libcom-err2_1.45.4-1
libcroco3_0.6.13-1
libdb5.3_5.3.28+dfsg1-0.6
libdbus-1-3_1.12.16-2
libdbus-1-dev_1.12.16-2
libdebconfclient0_0.250
libdebhelper-perl_12.7.1
libdpkg-perl_1.19.7
libelf1_0.176-1.1
libexpat1_2.2.9-1
libexpat1-dev_2.2.9-1
libext2fs2_1.45.4-1
libfakeroot_1.24-1
libfdisk1_2.34-0.1
libffi-dev_3.2.1-9
libffi6_3.2.1-9
libfile-stripnondeterminism-perl_1.6.2-1
libgcc-9-dev_9.2.1-19
libgcc1_1:9.2.1-19
libgcrypt20_1.8.5-3
libgdbm-compat4_1.18.1-5
libgdbm6_1.18.1-5
libgirepository-1.0-1_1.62.0-2
libglib2.0-0_2.62.2-3
libglib2.0-bin_2.62.2-3
libglib2.0-data_2.62.2-3
libglib2.0-dev_2.62.2-3
libglib2.0-dev-bin_2.62.2-3
libgmp10_2:6.1.2+dfsg-4
libgnutls30_3.6.10-4
libgomp1_9.2.1-19
libgpg-error0_1.36-7
libhogweed5_3.5.1+really3.5.1-2
libicu63_63.2-2
libidn2-0_2.2.0-2
libisl21_0.21-2
libitm1_9.2.1-19
libjs-jquery_3.3.1~dfsg-3
libjs-sphinxdoc_1.8.5-3
libjs-underscore_1.9.1~dfsg-1
liblsan0_9.2.1-19
liblz4-1_1.9.2-2
liblzma5_5.2.4-1+b1
libmagic-mgc_1:5.37-6
libmagic1_1:5.37-6
libmount-dev_2.34-0.1
libmount1_2.34-0.1
libmpc3_1.1.0-1
libmpdec2_2.4.2-2
libmpfr6_4.0.2-1
libncurses6_6.1+20191019-1
libncursesw6_6.1+20191019-1
libnettle7_3.5.1+really3.5.1-2
libp11-kit0_0.23.18.1-2
libpam-modules_1.3.1-5
libpam-modules-bin_1.3.1-5
libpam-runtime_1.3.1-5
libpam0g_1.3.1-5
libpcre16-3_2:8.39-12+b1
libpcre2-16-0_10.32-5+b1
libpcre2-32-0_10.32-5+b1
libpcre2-8-0_10.32-5+b1
libpcre2-dev_10.32-5+b1
libpcre2-posix0_10.32-5+b1
libpcre3_2:8.39-12+b1
libpcre3-dev_2:8.39-12+b1
libpcre32-3_2:8.39-12+b1
libpcrecpp0v5_2:8.39-12+b1
libperl5.30_5.30.0-9
libpipeline1_1.5.1-2
libpython2-dbg_2.7.17-1
libpython2-dev_2.7.17-1
libpython2-stdlib_2.7.17-1
libpython2.7_2.7.17-1
libpython2.7-dbg_2.7.17-1
libpython2.7-dev_2.7.17-1
libpython2.7-minimal_2.7.17-1
libpython2.7-stdlib_2.7.17-1
libpython3-all-dbg_3.7.5-3
libpython3-all-dev_3.7.5-3
libpython3-dbg_3.7.5-3
libpython3-dev_3.7.5-3

Processed: /usr/bin/dh_python2: is a #!/usr/bin/python script but does not depend on python

2019-11-17 Thread Debian Bug Tracking System
Processing control commands:

> affects -1 src:dbus-python
Bug #944894 [python2] /usr/bin/dh_python2: is a #!/usr/bin/python script but 
does not depend on python
Added indication that 944894 affects src:dbus-python

-- 
944894: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=944894
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#937657: Issue with numpy under Python 3.8

2019-11-17 Thread Graham Inggs
Hi Andreas

On Sat, 16 Nov 2019 at 16:09, Andreas Tille  wrote:
> Its not about testing.  Its the usual build time test.  If I'd do a
> source upload of this package it will FTBFS under the current state
> of the archive.

If you look on the numpy tracker page [1], you'll see there is a note:

"This package is part of the ongoing testing transition known as
python3.8. Please avoid uploads unrelated to this transition, they
would likely delay it and require supplementary work from the release
managers."

Regards
Graham


[1] https://tracker.debian.org/pkg/numpy



Bug#944892: oce: autopkgtest fails due to broken CMakeLists.txt

2019-11-17 Thread Felix Geyer
Source: oce
Version: 0.18.2-3
Severity: serious

The oce autopkgtest fails since cmake 3.15 entered unstable:

> CMake Warning (dev) in CMakeLists.txt:
>   No project() command is present.  The top-level CMakeLists.txt file must
>   contain a literal, direct call to the project() command.  Add a line of
>   code such as
>
> project(ProjectName)
>
>   near the top of the file, but after cmake_minimum_required().
>
>   CMake is pretending there is a "project(Project)" command on the first
>   line.

https://ci.debian.net/data/autopkgtest/testing/amd64/o/oce/3434170/log.gz

Corresponding cmake documentation:
https://cmake.org/cmake/help/v3.16/command/project.html#usage

Note that this isn't a new requirement but cmake just started to print a
warning.

Filing as serious since this blocks cmake migration to testing.



Bug#944893: wslay: autopkgtest fails due to broken CMakeLists.txt

2019-11-17 Thread Felix Geyer
Source: wslay
Version: 1.1.0-1
Severity: serious

The wslay autopkgtest fails since cmake 3.15 entered unstable:

> CMake Warning (dev) in CMakeLists.txt:
>   No project() command is present.  The top-level CMakeLists.txt file must
>   contain a literal, direct call to the project() command.  Add a line of
>   code such as
>
> project(ProjectName)
>
>   near the top of the file, but after cmake_minimum_required().
>
>   CMake is pretending there is a "project(Project)" command on the first
>   line.
> This warning is for project developers.  Use -Wno-dev to suppress it.

https://ci.debian.net/data/autopkgtest/testing/amd64/w/wslay/3434172/log.gz

Corresponding cmake documentation:
https://cmake.org/cmake/help/v3.16/command/project.html#usage

Note that this isn't a new requirement but cmake just started to print a
warning.

Filing as serious since this blocks cmake migration to testing.



Bug#934382: marked as done (cvxopt: FTBFS on non-amd64 architectures)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 11:49:34 +
with message-id 
and subject line Bug#934382: fixed in cvxopt 1.2.3+dfsg-2
has caused the Debian Bug report #934382,
regarding cvxopt: FTBFS on non-amd64 architectures
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
934382: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=934382
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: cvxopt
Version: 1.2.3+dfsg-1
Severity: serious

As shown by buildd logs [1], compiling src/C/umfpack.c fails on all
architectures except amd64 because umfpack.h is not found. This is
because line 61 of setup.py tests whether any files matching
/usr/lib/x86_64-linux-gnu/libsuitesparse* exist, which is false on
non-amd64 Debian buildds even when libsuitesparse-dev is installed.

[1] https://buildd.debian.org/status/package.php?p=cvxopt
--- End Message ---
--- Begin Message ---
Source: cvxopt
Source-Version: 1.2.3+dfsg-2

We believe that the bug you reported is fixed in the latest version of
cvxopt, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 934...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Graham Inggs  (supplier of updated cvxopt package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Sun, 17 Nov 2019 11:29:33 +
Source: cvxopt
Architecture: source
Version: 1.2.3+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Graham Inggs 
Closes: 934382 936357
Changes:
 cvxopt (1.2.3+dfsg-2) unstable; urgency=medium
 .
   * Team upload
 .
   [ Adam Conrad ]
   * multiarch.diff: Fix build with multiarch on !amd64 (Closes: #934382)
 .
   [ Graham Inggs ]
   * Stop building python-cvxopt (Closes: #936357)
   * Update debian/python-cvxopt-doc.doc-base
Checksums-Sha1:
 6c850a444b3ac43a5be1f43b6df68bb5c57e3d82 2330 cvxopt_1.2.3+dfsg-2.dsc
 03f27783c95d6cd394b6a3aa844b5f1d8ba6712b 6056 cvxopt_1.2.3+dfsg-2.debian.tar.xz
Checksums-Sha256:
 a3d71e833ad42c6b30855b31596b69f4eda5e78b2cf03391d50689e7b6333b47 2330 
cvxopt_1.2.3+dfsg-2.dsc
 26caa024d6b8f73cce7c2f675708b6c1e41eb793171bea5d25351ef3ce9c46d6 6056 
cvxopt_1.2.3+dfsg-2.debian.tar.xz
Files:
 b53bd785e99b000166c93f9987520b0e 2330 python optional cvxopt_1.2.3+dfsg-2.dsc
 19201d2e09b66a1975aca5f688838b97 6056 python optional 
cvxopt_1.2.3+dfsg-2.debian.tar.xz

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Bug#838994: Bug#891493: Bug#838994: Bug#891493: unresolved gtk2-engines-murrine situation (was: numix-gtk-theme: Undocumented and very likely also broken Breaks against murrine-themes since 2.6.7-2)

2019-11-17 Thread Mike Gabriel

Hi Yves-Alexis,

On  Do 14 Nov 2019 15:09:07 CET, Mike Gabriel wrote:


Hi Yves-Alexi,

On  Do 14 Nov 2019 08:03:57 CET, Yves-Alexis Perez wrote:


On Wed, 2019-11-13 at 20:58 +, Mike Gabriel wrote:

One last question: For the themes you maintain, is it ok if I provide
the "Provides: any-murrine-theme" patches (as MRs or pushed commits)
and possibly even NMU them for those murrine-like themes that need them?

Like in numix-gtk-theme [1].

Alternative option is me filing wishlist bugs against all related packages.


Go ahead with NMU, and yes I guess you can directly commit/push to the
repository. At that point I think I should just remove myself from
maintainers/uploaders of the theme packages, I'm unlikely to have time for
them in the near future.

Regards,
- --
Yves-Alexis


ok. Will do the NMUs. Let me know, if / when you remove yourself  
from Uploaders: / Maintainer: fields (I will probably miss it if not  
pinged explicitly).


Re-thought this...

I just rescheduled the NMUs of numix-gtk-theme and  
gtk2-engine-murrine, so that we can get the maintainer status  
straight, before the any-murrine-theme virtual package falls into the  
archive.


As introducing a virtual package is a bit of a hassle regarding Debian  
Policy inclusion etc. the question here remains about your plans  
regarding maintainer/uploader status for those murrine theme packages.


Because, if you choose to drop from maintainer/uploaders fields, I  
will go down a different route. In that case, we don't need a  
compromise, but just the next maintainer's decision. This could save  
us all (myself, policy team) the trouble of introducing a virtual  
package for this recommends situation entirely. I as maintainer would  
simply drop murrine-themes from Recommends: in gtk2-engine-murrine.


If you plan to continue with theme maintenance (esp.  
gtk2-engine-murrine), I am happy to introduce the virtual package  
any-murrine-theme as discussed earlier, announce it on debian-devel,  
make sure it gets added to policy, etc.pp.


If you plan to drop maintenance sooner or later anyway, then please  
state that asap (packages are in deferred-15 from today again), so  
that I can change the uploads and make these bugs go away without  
introducing a virtual package.


Thanks for you time!
Mike
--

DAS-NETZWERKTEAM
c\o Technik- und Ökologiezentrum Eckernförde
Mike Gabriel, Marienthaler str. 17, 24340 Eckernförde
mobile: +49 (1520) 1976 148
landline: +49 (4351) 850 8940

GnuPG Fingerprint: 9BFB AEE8 6C0A A5FF BF22  0782 9AF4 6B30 2577 1B31
mail: mike.gabr...@das-netzwerkteam.de, http://das-netzwerkteam.de



pgpV5v1S5wOde.pgp
Description: Digitale PGP-Signatur


Processed: block 941907 with 944844

2019-11-17 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> block 941907 with 944844
Bug #941907 [release.debian.org] transition: ocaml
941907 was blocked by: 943920
941907 was not blocking any bugs.
Added blocking bug(s) of 941907: 944844
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
941907: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=941907
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#940839: openshot-qt: cannot start, crashes immediately

2019-11-17 Thread Andrew Atkinson
Package: openshot
Version: 2.4.3+dfsg1-1
Followup-For: Bug #940839

Dear Maintainer,

Starting from the gui and nothing happens, using terminal

:~$ openshot-qt
Compiled translation resources missing!
Loading translations from: /usr/lib/python3/dist-packages/openshot_qt/language
Loaded modules from installed directory: /usr/lib/python3/dist-
packages/openshot_qt
  launch:INFO 
  launch:INFOOpenShot (version 2.4.3)
  launch:INFO 
 app:INFO openshot-qt version: 2.4.3
 app:INFO libopenshot version: 0.2.2
 app:INFO platform: Linux-5.2.0-3-amd64-x86_64-with-debian-bullseye-sid
 app:INFO processor:
 app:INFO machine: x86_64
 app:INFO python version: 3.7.5rc1
 app:INFO qt5 version: 5.11.3
 app:INFO pyqt5 version: 5.12.3
language:INFO Qt Detected Languages: ['en-GB', 'en']
language:INFO LANG Environment Variable: en_GB.UTF-8
language:INFO LOCALE Environment Variable:
language:INFO OpenShot Preference Language: Default
project_data:INFO Setting default profile to HD 720p 23.98 fps
 app:INFO Setting font to Cantarell
logger_libopenshot:INFO Connecting to libopenshot with debug port: 5556
 app:INFO Setting custom dark theme
qt.svg: link SVGID_18_-5 hasn't been detected!
qt.svg: link SVGID_18_-5 hasn't been detected!
qt.svg: link SVGID_22_-5 hasn't been detected!
qt.svg: link SVGID_24_-2 hasn't been detected!
qt.svg: link SVGID_24_-2 hasn't been detected!
QMainWindow::addDockWidget: invalid 'area' argument
 metrics:INFO Track metric: [200] http://www.google-
analytics.com/collect?cid=873cd2e2-76cb-41a1-8e30-1d7341e2c385=1=UA-4381101-5=OpenShot+Video+Editor=1=org.openshot.openshot-
qt=2.4.3=en-
us=Mozilla%2F5.0+%28X11%3B+Linux+x86_64%29+AppleWebKit%2F537.36+%28KHTML%2C+like+Gecko%29+Chrome%2F37.0.2062.120+Safari%2F537.36=0.2.2=3.7.5rc1=5.11.3=5.12.3=debian-
bullseye%2Fsid-=screenview=start=launch-app | (35 bytes)
 metrics:INFO Track metric: [200] http://www.google-
analytics.com/collect?cid=873cd2e2-76cb-41a1-8e30-1d7341e2c385=1=UA-4381101-5=OpenShot+Video+Editor=1=org.openshot.openshot-
qt=2.4.3=en-
us=Mozilla%2F5.0+%28X11%3B+Linux+x86_64%29+AppleWebKit%2F537.36+%28KHTML%2C+like+Gecko%29+Chrome%2F37.0.2062.120+Safari%2F537.36=0.2.2=3.7.5rc1=5.11.3=5.12.3=debian-
bullseye%2Fsid-=screenview=main-screen | (35 bytes)
 ui_util:INFO Initializing UI for MainWindow
 ui_util:INFO Binding event MainWindow:actionNew_trigger
 ui_util:INFO Binding event MainWindow:actionOpen_trigger
 ui_util:INFO Binding event MainWindow:actionSave_trigger
 ui_util:INFO Binding event MainWindow:actionUndo_trigger
 ui_util:INFO Binding event MainWindow:actionSaveAs_trigger
 ui_util:INFO Binding event MainWindow:actionImportFiles_trigger
 ui_util:INFO Binding event MainWindow:actionImportImageSequence_trigger
 ui_util:INFO Binding event MainWindow:actionRedo_trigger
 ui_util:INFO Binding event MainWindow:actionRemoveClip_trigger
 ui_util:INFO Binding event MainWindow:actionRemoveTransition_trigger
 ui_util:INFO Binding event MainWindow:actionExportVideo_trigger
 ui_util:INFO Binding event MainWindow:actionUploadVideo_trigger
 ui_util:INFO Binding event MainWindow:actionAddTrack_trigger
 ui_util:INFO Binding event MainWindow:actionPreferences_trigger
 ui_util:INFO Binding event MainWindow:actionPlay_trigger
 ui_util:INFO Binding event MainWindow:actionJumpStart_trigger
 ui_util:INFO Binding event MainWindow:actionRewind_trigger
 ui_util:INFO Binding event MainWindow:actionFastForward_trigger
 ui_util:INFO Binding event MainWindow:actionJumpEnd_trigger
 ui_util:INFO Binding event MainWindow:actionSaveFrame_trigger
 ui_util:WARNING Icon theme camera-photo-symbolic not found. Will use
backup icon.
 ui_util:INFO Binding event MainWindow:actionArrowTool_trigger
 ui_util:INFO Binding event MainWindow:actionRazorTool_trigger
 ui_util:INFO Binding event MainWindow:actionSnappingTool_trigger
 ui_util:INFO Binding event MainWindow:actionAddMarker_trigger
 ui_util:INFO Binding event MainWindow:actionPreviousMarker_trigger
 ui_util:INFO Binding event MainWindow:actionNextMarker_trigger
 ui_util:INFO Binding event MainWindow:actionFilesShowAll_trigger
 ui_util:INFO Binding event MainWindow:actionFilesShowVideo_trigger
 ui_util:INFO Binding event MainWindow:actionFilesShowAudio_trigger
 ui_util:INFO Binding event MainWindow:actionFilesShowImage_trigger
 ui_util:INFO Binding event MainWindow:actionTransitionsShowAll_trigger
 ui_util:INFO Binding event MainWindow:actionTransitionsShowCommon_trigger
 ui_util:INFO Binding event MainWindow:actionTimelineZoomIn_trigger
 ui_util:INFO Binding event MainWindow:actionTimelineZoomOut_trigger
 ui_util:INFO Binding event MainWindow:actionTitle_trigger
 ui_util:INFO 

Bug#931698: fixed in python-pygit2 0.28.2-1

2019-11-17 Thread Pirate Praveen
On Tue, 16 Jul 2019 20:40:57 + =?utf-8?b?T25kxZllaiBOb3bDvQ==?=
 wrote:
>  python-pygit2 (0.28.2-1) experimental; urgency=medium

libgit2 0.28 is now in unstable, please reupload this version to unstable.



Bug#941351: marked as done (peruse: Peruse fails to start)

2019-11-17 Thread Debian Bug Tracking System
Your message dated Sun, 17 Nov 2019 08:42:07 +
with message-id 
and subject line Bug#941351: fixed in peruse 1.2+dfsg+20191117-1
has caused the Debian Bug report #941351,
regarding peruse: Peruse fails to start
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
941351: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=941351
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: peruse
Version: 1.2+dfsg+20190713-1
Severity: grave
Justification: renders package unusable

Dear Maintainer,

attempting to run peruse (or perusecreator) from the command line
results in the following output:

~$ peruse
Warning: Ignoring XDG_SESSION_TYPE=wayland on Gnome. Use 
QT_QPA_PLATFORM=wayland to run on Wayland anyway.

(peruse:9225): Gtk-WARNING **: 13:14:48.393: Theme parsing error: gtk.css:6:20: 
The 'gtk-key-bindings' property has been renamed to '-gtk-ke
y-bindings'
Failed to load the component from disk. Reported error was: 
"file:///usr/share/peruse/qml/Main.qml:26 Type PeruseMain unavailable\nfile:///u
sr/share/peruse/qml/PeruseMain.qml:300 Type Settings 
unavailable\nfile:///usr/share/peruse/qml/Settings.qml:82 Type 
Kirigami.SwipeListItem u
navailable\nfile:///usr/lib/x86_64-linux-gnu/qt5/qml/org/kde/kirigami.2/styles/org.kde.desktop/SwipeListItem.qml:25
 Type T.SwipeListItem una
vailable\nfile:///usr/lib/x86_64-linux-gnu/qt5/qml/org/kde/kirigami.2/templates/SwipeListItem.qml:264
 Syntax error\n"

Peruse then fails to start and crashes.

Apparently this is an issue with
/usr/lib/x86_64-linux-gnu/qt5/qml/org/kde/kirigami.2/templates/SwipeListItem.qml:

   function updateVisibleActions(definitelyVisible = false) {

Default values for function parameters are not supported.
It should be:

   function updateVisibleActions(definitelyVisible) {
if (definitelyVisible === undefined) definitelyVisible = false;

Unfortunately, then it fails on a missing component:

(peruse:10096): Gtk-WARNING **: 13:24:30.678: Theme parsing error: 
gtk.css:6:20: The 'gtk-key-bindings' property has been renamed to '-gtk-k
ey-bindings'
Failed to load the component from disk. Reported error was: 
"file:///usr/share/peruse/qml/Main.qml:26 Type PeruseMain unavailable\nfile:///u
sr/share/peruse/qml/PeruseMain.qml:300 Type Settings 
unavailable\nfile:///usr/share/peruse/qml/Settings.qml:82 Type 
Kirigami.SwipeListItem u
navailable\nfile:///usr/lib/x86_64-linux-gnu/qt5/qml/org/kde/kirigami.2/styles/org.kde.desktop/SwipeListItem.qml:25
 Type T.SwipeListItem una
vailable\nfile:///usr/lib/x86_64-linux-gnu/qt5/qml/org/kde/kirigami.2/templates/SwipeListItem.qml:22
 module \"QtQuick.Controls\" version 2.7
 is not installed\n"

Cheers,
Matteo Settenvini

-- System Information:
Debian Release: bullseye/sid
  APT prefers unstable
  APT policy: (800, 'unstable'), (800, 'testing'), (780, 'experimental'), (500, 
'unstable-debug'), (500, 'testing-debug'), (1, 'experimental-debug')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 5.2.0-3-amd64 (SMP w/8 CPU cores)
Locale: LANG=it_IT.utf8, LC_CTYPE=it_IT.utf8 (charmap=UTF-8), 
LANGUAGE=it_IT.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages peruse depends on:
ii  kio 5.62.1-1
ii  libc6   2.29-2
ii  libgcc1 1:9.2.1-8
ii  libkf5archive5  5.62.0-1
ii  libkf5baloo55.62.0-2
ii  libkf5configcore5   5.62.0-1
ii  libkf5coreaddons5   5.62.0-1
ii  libkf5declarative5  5.62.0-1
ii  libkf5filemetadata3 5.62.0-1
ii  libkf5i18n5 5.62.0-1
ii  libkf5kiocore5  5.62.1-1
ii  libkf5kiowidgets5   5.62.1-1
ii  libqt5core5a5.11.3+dfsg1-4
ii  libqt5gui5  5.11.3+dfsg1-4
ii  libqt5qml5  5.11.3-4
ii  libqt5quick55.11.3-4
ii  libqt5sql5  5.11.3+dfsg1-4
ii  libqt5widgets5  5.11.3+dfsg1-4
ii  libstdc++6  9.2.1-8
ii  peruse-common   1.2+dfsg+20190713-1
ii  qml-module-org-kde-kirigami25.62.0-2
ii  qml-module-org-kde-newstuff 5.62.0-1
ii  qml-module-qt-labs-folderlistmodel  5.11.3-4
ii  qml-module-qt-labs-settings 5.11.3-4
ii  qml-module-qtquick-controls 5.11.3-2
ii  qml-module-qtquick-dialogs  5

Processed: tagging 941351

2019-11-17 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 941351 + pending
Bug #941351 [peruse] peruse: Peruse fails to start
Added tag(s) pending.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
941351: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=941351
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems