Bug#933937: biobambam2: /usr/bin/fastaexplode is already provided by exonerate

[Andreas Tille]

Control: tags -1 upstream
Control: forwarded -1 https://gitlab.com/german.tischler/biobambam2/issues/83, 
Guy St.C. Slater 

Hi Guy,

as you can read in the bug report[1] against exonerate and biobambam2
there is a name space conflict between these two packages and thus the
Debian packages can not be installed simultaneously.  I have reported
that issue to biobambam2[2] to enable some educated decision between you
two parties what might be the best solution to solve the name space
conflict.

Kind regards

   Andreas.

[1] https://bugs.debian.org/933937
[2] https://gitlab.com/german.tischler/biobambam2/issues/83

-- 
http://fam-tille.de

Bug#933937: biobambam2: /usr/bin/fastaexplode is already provided by exonerate

[Andreas Beckmann]

Package: biobambam2
Version: 2.0.95-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package failed to install
because it tries to overwrite other packages files.

>From the attached log (scroll to the bottom...):

  Selecting previously unselected package biobambam2.
  Preparing to unpack .../biobambam2_2.0.95-1_amd64.deb ...
  Unpacking biobambam2 (2.0.95-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/biobambam2_2.0.95-1_amd64.deb (--unpack):
   trying to overwrite '/usr/bin/fastaexplode', which is also in package 
exonerate 2.4.0-4
  Errors were encountered while processing:
   /var/cache/apt/archives/biobambam2_2.0.95-1_amd64.deb


cheers,

Andreas


exonerate=2.4.0-4_biobambam2=2.0.95-1.log.gz
Description: application/gzip