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Hi,
I've updated nipy Git[1] to version 0.4.3~rc1 which solves the
originally reported issue. However, there are some remaining failures
in the build time test:
...
==
ERROR: Failure: TypeError (unsupported operand type(s) for *: 'GreaterThan' and
'Add')
--
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/nose/failure.py", line 39, in runTest
raise self.exc_val.with_traceback(self.tb)
File "/usr/lib/python3/dist-packages/nose/loader.py", line 416, in
loadTestsFromName
module = self.importer.importFromPath(
File "/usr/lib/python3/dist-packages/nose/importer.py", line 47, in
importFromPath
return self.importFromDir(dir_path, fqname)
File "/usr/lib/python3/dist-packages/nose/importer.py", line 94, in
importFromDir
mod = load_module(part_fqname, fh, filename, desc)
File "/usr/lib/python3.9/imp.py", line 234, in load_module
return load_source(name, filename, file)
File "/usr/lib/python3.9/imp.py", line 171, in load_source
module = _load(spec)
File "", line 711, in _load
File "", line 680, in _load_unlocked
File "", line 790, in exec_module
File "", line 228, in _call_with_frames_removed
File
"/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py",
line 20, in
from .hrf import glover
File
"/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py",
line 123, in
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File
"/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py",
line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
==
ERROR: Failure: TypeError (unsupported operand type(s) for *: 'GreaterThan' and
'Add')
--
... (more of this type) ...
==
FAIL: Doctest: nipy.modalities.fmri.utils.convolve_functions
--
Traceback (most recent call last):
File "/usr/lib/python3.9/doctest.py", line 2204, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for
nipy.modalities.fmri.utils.convolve_functions
File
"/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/utils.py",
line 494, in convolve_functions
--
File
"/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/utils.py",
line 533, in nipy.modalities.fmri.utils.convolve_functions
Failed example:
f1 = (t > 0) * (t < 1)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.9/doctest.py", line 1336, in __run
exec(compile(example.source, filename, "single",
File "", line
1, in
f1 = (t > 0) * (t < 1)
TypeError: unsupported operand type(s) for *: 'StrictGreaterThan' and
'StrictLessThan'
--
File
"/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/utils.py",
line 538, in nipy.modalities.fmri.utils.convolve_functions
Failed example:
tri = convolve_functions(f1, f1, [0, 2], [0, 2], 1.0e-3, name='conv')
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.9/doctest.py", line 1336, in __run
exec(compile(example.source, filename, "single",
File "", line
1, in
tri = convolve_functions(f1, f1, [0, 2], [0, 2], 1.0e-3, name='conv')
NameError: name 'f1' is not defined
--
...
--
File
"/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/utils.py",
line 549, in nipy.modalities.fmri.utils.convolve_functions
Failed example:
y = ftri(x)
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.9/doctest.py", line 1336, in __run
exec(compile(example.source, filename, "single",
File "", line
1, in
y = ftri(x)
NameError: name 'ftri' is not defined
--
File
"/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/utils.py",
line 552, in nipy.modalities.fmri.utils.convolve_functions
Failed example:
x[np.argmax(y)]
Exception raised:
Traceback (most recent call last):
File "/usr/lib/python3.9/doctest.py", line 1336, in __run
