Bug#967965: marked as done (astropy: FTBFS with scipy 1.5: [doctest] astropy.stats.funcs.binom_conf_interval failed)

2020-10-28 Thread Debian Bug Tracking System
Your message dated Wed, 28 Oct 2020 12:10:20 +0100
with message-id <38b54f2e-574a-2199-91ec-074e061d8...@debian.org>
and subject line Re: astropy test fails
has caused the Debian Bug report #967965,
regarding astropy: FTBFS with scipy 1.5: [doctest] 
astropy.stats.funcs.binom_conf_interval failed
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
967965: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=967965
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: astropy
Version: 4.0.1+post1-3
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)
Control: found -1 4.1~rc1-2

Hi,

astropy recently started to FTBFS in sid (and experimental, but not yet
in bullseye). I could reproduce the failure in bullseye with python3-scipy/sid:

=== FAILURES ===
__ [doctest] astropy.stats.funcs.binom_conf_interval ___
631 
632 Integer inputs return an array with shape (2,):
633 
634 >>> binom_conf_interval(4, 5, interval='wilson')
635 array([0.57921724, 0.92078259])
636 
637 Arrays of arbitrary dimension are supported. The Wilson and Jeffreys
638 intervals give similar results, even for small k, N:
639 
640 >>> binom_conf_interval([0, 1, 2, 5], 5, interval='wilson')
Expected:
array([[0., 0.07921741, 0.21597328, 0.8304],
   [0.1696, 0.42078276, 0.61736012, 1.]])
Got:
array([[1.38777878e-17, 7.92174125e-02, 2.15973276e-01, 8.3042e-01],
   [1.6958e-01, 4.20782762e-01, 6.17360116e-01, 1.e+00]])

/build/astropy-4.0.1+post1/.pybuild/cpython3_3.8/build/astropy/stats/funcs.py:640:
 DocTestFailure
= 1 failed, 13907 passed, 412 skipped, 49 xfailed, 12 xpassed in 169.79 seconds 
=


Andreas


astropy_bullseye+scipy_sid.build.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: astropy
Source-Version: 4.1-1


These bugs are fixed in the just uploaded version of astropy; I just
forgot to mention it in d/changelog.

Cheers

Ole--- End Message ---


Bug#967965: marked as done (astropy: FTBFS with scipy 1.5: [doctest] astropy.stats.funcs.binom_conf_interval failed)

2020-08-06 Thread Debian Bug Tracking System
Your message dated Thu, 06 Aug 2020 13:03:29 +
with message-id 
and subject line Bug#967965: fixed in astropy 4.0.1+post1-4
has caused the Debian Bug report #967965,
regarding astropy: FTBFS with scipy 1.5: [doctest] 
astropy.stats.funcs.binom_conf_interval failed
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
967965: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=967965
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: astropy
Version: 4.0.1+post1-3
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)
Control: found -1 4.1~rc1-2

Hi,

astropy recently started to FTBFS in sid (and experimental, but not yet
in bullseye). I could reproduce the failure in bullseye with python3-scipy/sid:

=== FAILURES ===
__ [doctest] astropy.stats.funcs.binom_conf_interval ___
631 
632 Integer inputs return an array with shape (2,):
633 
634 >>> binom_conf_interval(4, 5, interval='wilson')
635 array([0.57921724, 0.92078259])
636 
637 Arrays of arbitrary dimension are supported. The Wilson and Jeffreys
638 intervals give similar results, even for small k, N:
639 
640 >>> binom_conf_interval([0, 1, 2, 5], 5, interval='wilson')
Expected:
array([[0., 0.07921741, 0.21597328, 0.8304],
   [0.1696, 0.42078276, 0.61736012, 1.]])
Got:
array([[1.38777878e-17, 7.92174125e-02, 2.15973276e-01, 8.3042e-01],
   [1.6958e-01, 4.20782762e-01, 6.17360116e-01, 1.e+00]])

/build/astropy-4.0.1+post1/.pybuild/cpython3_3.8/build/astropy/stats/funcs.py:640:
 DocTestFailure
= 1 failed, 13907 passed, 412 skipped, 49 xfailed, 12 xpassed in 169.79 seconds 
=


Andreas


astropy_bullseye+scipy_sid.build.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: astropy
Source-Version: 4.0.1+post1-4
Done: Ole Streicher 

We believe that the bug you reported is fixed in the latest version of
astropy, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 967...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ole Streicher  (supplier of updated astropy package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Format: 1.8
Date: Thu, 06 Aug 2020 14:30:26 +0200
Source: astropy
Architecture: source
Version: 4.0.1+post1-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Astronomy Maintainers 

Changed-By: Ole Streicher 
Closes: 967965
Changes:
 astropy (4.0.1+post1-4) unstable; urgency=medium
 .
   * Fix stats doctest failures due to upstream changes. (Closes: #967965)
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