Bug#970340: [Debian-med-packaging] Bug#970340: rna-star: autopkgtest regression: --genomeSAindexNbases 8 is too large for the genome size=99940

[Andreas Tille]

Dear Sascha,

On Tue, Sep 15, 2020 at 04:32:02PM +0200, Sascha Steinbiss wrote:
> 
> I can confirm that that was the issue. I have pushed a fix to git and
> will make an upload later if there are no objections.

No objections for fixing a bug at all. ;-)

Thanks a lot

   Andreas.

-- 
http://fam-tille.de

Bug#970340: [Debian-med-packaging] Bug#970340: rna-star: autopkgtest regression: --genomeSAindexNbases 8 is too large for the genome size=99940

[Sascha Steinbiss]

Hi all,

>> you once wrote that test.  Do you have any idea how to fix it?
> 
> Since this is just a warning, it might be sufficient to simply add
> 
>   Restrictions: allow-stderr
> 
> That would make sure that printing a warning to stderr does not cause
> the test to fail. I will test this later and fix it if that was the problem.

I can confirm that that was the issue. I have pushed a fix to git and
will make an upload later if there are no objections.

Best regards
Sascha