[med-svn] [Git][med-team/plink1-9] Pushed new tag debian/1.90_b6.15-200121-1

2020-01-21 Thread Dylan Aïssi


Dylan Aïssi pushed new tag debian/1.90_b6.15-200121-1 at Debian Med / plink1.9

-- 
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[med-svn] [Git][med-team/plink1-9][master] Upload to unstable

2020-01-21 Thread Dylan Aïssi


Dylan Aïssi pushed to branch master at Debian Med / plink1.9


Commits:
3ea14fa2 by Dylan Aïssi at 2020-01-22T08:03:14+01:00
Upload to unstable

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,8 +1,8 @@
-plink1.9 (1.90~b6.15-200121-1) UNRELEASED; urgency=medium
+plink1.9 (1.90~b6.15-200121-1) unstable; urgency=medium
 
   * New upstream release.
 
- -- Dylan Aïssi   Wed, 22 Jan 2020 07:57:10 +0100
+ -- Dylan Aïssi   Wed, 22 Jan 2020 08:03:00 +0100
 
 plink1.9 (1.90~b6.13-191130-1) unstable; urgency=medium
 



View it on GitLab: 
https://salsa.debian.org/med-team/plink1-9/commit/3ea14fa2063d2cbb7a19a2ff2643b1854e70cf19

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[med-svn] [Git][med-team/plink1-9][master] 3 commits: Update changelogs

2020-01-21 Thread Dylan Aïssi


Dylan Aïssi pushed to branch master at Debian Med / plink1.9


Commits:
0c4e0524 by Dylan Aïssi at 2020-01-22T07:59:33+01:00
Update changelogs

- - - - -
223cb97e by Dylan Aïssi at 2020-01-22T07:59:52+01:00
New upstream version 1.90~b6.15-200121
- - - - -
3b9533e1 by Dylan Aïssi at 2020-01-22T07:59:55+01:00
Update upstream source from tag upstream/1.90_b6.15-200121

Update to upstream version 1.90~b6.15-200121
with Debian dir 35924b979f6c848c69a744203c56e82c63e1185c
- - - - -


30 changed files:

- debian/changelog
- debian/upstream.docs/upstream.changelog
- plink.c
- plink_assoc.c
- plink_assoc.h
- plink_calc.c
- plink_cluster.c
- plink_cnv.c
- plink_cnv.h
- plink_common.c
- plink_common.h
- plink_data.c
- plink_data.h
- plink_dosage.c
- plink_dosage.h
- plink_family.c
- plink_family.h
- plink_filter.c
- plink_filter.h
- plink_glm.c
- plink_glm.h
- plink_help.c
- plink_help.h
- plink_homozyg.c
- plink_homozyg.h
- plink_lasso.c
- plink_lasso.h
- plink_ld.c
- plink_ld.h
- plink_matrix.c


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/plink1-9/compare/adbaf0a6779d187e081aadd90fd2bc54a1bb6d3e...3b9533e1ef537ee025428b5c702dfec5bc31

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[med-svn] [Git][med-team/plink1-9] Pushed new tag upstream/1.90_b6.15-200121

2020-01-21 Thread Dylan Aïssi


Dylan Aïssi pushed new tag upstream/1.90_b6.15-200121 at Debian Med / plink1.9

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[med-svn] [Git][med-team/plink1-9][pristine-tar] pristine-tar data for plink1.9_1.90~b6.15-200121.orig.tar.xz

2020-01-21 Thread Dylan Aïssi


Dylan Aïssi pushed to branch pristine-tar at Debian Med / plink1.9


Commits:
c295e99a by Dylan Aïssi at 2020-01-22T07:59:55+01:00
pristine-tar data for plink1.9_1.90~b6.15-200121.orig.tar.xz

- - - - -


2 changed files:

- + plink1.9_1.90~b6.15-200121.orig.tar.xz.delta
- + plink1.9_1.90~b6.15-200121.orig.tar.xz.id


Changes:

=
plink1.9_1.90~b6.15-200121.orig.tar.xz.delta
=
Binary files /dev/null and b/plink1.9_1.90~b6.15-200121.orig.tar.xz.delta differ


=
plink1.9_1.90~b6.15-200121.orig.tar.xz.id
=
@@ -0,0 +1 @@
+ce0e0aced6f0705cda62c2c4df4f998352a0cf16



View it on GitLab: 
https://salsa.debian.org/med-team/plink1-9/commit/c295e99ab66e37ee74a043e39b767fd6cea9accd

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[med-svn] [Git][med-team/plink1-9][upstream] New upstream version 1.90~b6.15-200121

2020-01-21 Thread Dylan Aïssi


Dylan Aïssi pushed to branch upstream at Debian Med / plink1.9


Commits:
223cb97e by Dylan Aïssi at 2020-01-22T07:59:52+01:00
New upstream version 1.90~b6.15-200121
- - - - -


30 changed files:

- plink.c
- plink_assoc.c
- plink_assoc.h
- plink_calc.c
- plink_cluster.c
- plink_cnv.c
- plink_cnv.h
- plink_common.c
- plink_common.h
- plink_data.c
- plink_data.h
- plink_dosage.c
- plink_dosage.h
- plink_family.c
- plink_family.h
- plink_filter.c
- plink_filter.h
- plink_glm.c
- plink_glm.h
- plink_help.c
- plink_help.h
- plink_homozyg.c
- plink_homozyg.h
- plink_lasso.c
- plink_lasso.h
- plink_ld.c
- plink_ld.h
- plink_matrix.c
- plink_matrix.h
- plink_misc.c


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/plink1-9/commit/223cb97e75c0338e169437ae98c3fb16c42f60f6

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[med-svn] [Git][med-team/plink2] Pushed new tag debian/2.00_a3-200116+dfsg-1

2020-01-21 Thread Dylan Aïssi


Dylan Aïssi pushed new tag debian/2.00_a3-200116+dfsg-1 at Debian Med / plink2

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[med-svn] [Git][med-team/plink2][master] 2 commits: Update d/copyrigt

2020-01-21 Thread Dylan Aïssi


Dylan Aïssi pushed to branch master at Debian Med / plink2


Commits:
eede8bbc by Dylan Aïssi at 2020-01-22T07:14:23+01:00
Update d/copyrigt

- - - - -
d2f3a9ff by Dylan Aïssi at 2020-01-22T07:16:42+01:00
Upload to unstable

- - - - -


2 changed files:

- debian/changelog
- debian/copyright


Changes:

=
debian/changelog
=
@@ -1,8 +1,8 @@
-plink2 (2.00~a3-200116+dfsg-1) UNRELEASED; urgency=medium
+plink2 (2.00~a3-200116+dfsg-1) unstable; urgency=medium
 
   * New upstream release.
 
- -- Dylan Aïssi   Mon, 20 Jan 2020 07:41:03 +0100
+ -- Dylan Aïssi   Wed, 22 Jan 2020 07:16:26 +0100
 
 plink2 (2.00~a2-191128+dfsg-1) unstable; urgency=medium
 


=
debian/copyright
=
@@ -6,7 +6,7 @@ Comment: Exclude source code of the embedded zstd
 Files-Excluded: zstd
 
 Files: *
-Copyright: 2005-2019 Shaun Purcell , Christopher 
Chang
+Copyright: 2005-2020 Shaun Purcell , Christopher 
Chang
 License: GPL-3+
 
 Files: libdeflate/*
@@ -14,7 +14,8 @@ Copyright: 2016 Eric Biggers
 License: Expat
 
 Files: pgenlibr/*
-Copyright: 2019 Christopher Chang
+   cindex/*
+Copyright: 2019-2020 Christopher Chang
 License: LGPL-3+
 
 Files: include/SFMT.*
@@ -39,28 +40,28 @@ Files: pgenlib_ffi_support.*
include/plink2_thread.*
include/plink2_zstfile.*
pvar_ffi_support.*
-Copyright: 2005-2019 Shaun Purcell, Christopher Chang
+Copyright: 2005-2020 Shaun Purcell, Christopher Chang
 License: LGPL-3+
 
 Files: plink2_glm.cc
-Copyright: 2005-2019 Shaun Purcell, Christopher Chang
+Copyright: 2005-2020 Shaun Purcell, Christopher Chang
2009-2014 Shigeo Mitsunari  from the fast math 
library function posted at https://github.com/herumi/fmath
 License: GPL-3+ and BSD-3-Clause
 Comment: Only the part of the fast math library in under BSD-3-Clause
 
-Files: plink2_stats.cc
-Copyright: 2005-2019 Shaun Purcell, Christopher Chang
+Files: include/plink2_stats.cc
+Copyright: 2005-2020 Shaun Purcell, Christopher Chang
 License: GPL-3+ and BSL-1.0
 Comment: Some portions are derived from the Boost library 1.60 
(boost/math/special_functions/gamma.hpp
  and boost/math/special_functions/detail/igamma_inverse.hpp) which are under 
the BSL-1.0.
 
 Files: plink2_cpu.cc
 Copyright: 2016 Eric Biggers (libdeflate project)
-   2019 Christopher Chang
+   2019-2020 Christopher Chang
 License: Expat
 
 Files: debian/*
-Copyright: 2017-2019 Dylan Aïssi 
+Copyright: 2017-2020 Dylan Aïssi 
 License: GPL-3+
 
 License: GPL-3+



View it on GitLab: 
https://salsa.debian.org/med-team/plink2/compare/dee589a3df78071fed80de02a1616a8be50dcd5a...d2f3a9ff35aab5ba7d682197306d2ae258dbd4f3

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[med-svn] [Git][med-team/vmatch][master] fix check for SOURCE_DATE_EPOCH

2020-01-21 Thread Sascha Steinbiss


Sascha Steinbiss pushed to branch master at Debian Med / vmatch


Commits:
388341af by Sascha Steinbiss at 2020-01-22T06:29:39+01:00
fix check for SOURCE_DATE_EPOCH

- - - - -


2 changed files:

- debian/changelog
- debian/patches/reproducible-build.patch


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+vmatch (2.3.1+dfsg-3) unstable; urgency=medium
+
+  * Fix check for SOURCE_DATE_EPOCH.
+
+ -- Sascha Steinbiss   Wed, 22 Jan 2020 06:28:24 +0100
+
 vmatch (2.3.1+dfsg-2) unstable; urgency=medium
 
   * Source upload to allow for testing migration.


=
debian/patches/reproducible-build.patch
=
@@ -15,7 +15,7 @@ Last-Update: 2020-01-20
 -echo "#define ${PROGRAM}CFLAGS \"$*\""
 +echo "#define ${PROGRAM}CFLAGS \"(reproducible build)\""
 +
-+if [ -e "${SOURCE_DATE_EPOCH}" ]
++if [ -n "${SOURCE_DATE_EPOCH}" ]
 +then
 +  HOSTNAME="(reproducible build)"
 +else



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https://salsa.debian.org/med-team/vmatch/commit/388341af6815aed215951c1600594cc60e00ca48

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[med-svn] [Git][med-team/vmatch] Pushed new tag debian/2.3.1+dfsg-3

2020-01-21 Thread Sascha Steinbiss


Sascha Steinbiss pushed new tag debian/2.3.1+dfsg-3 at Debian Med / vmatch

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[med-svn] [Git][med-team/vmatch] Pushed new tag debian/2.3.1+dfsg-2

2020-01-21 Thread Sascha Steinbiss


Sascha Steinbiss pushed new tag debian/2.3.1+dfsg-2 at Debian Med / vmatch

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[med-svn] [Git][med-team/vmatch][master] source upload

2020-01-21 Thread Sascha Steinbiss


Sascha Steinbiss pushed to branch master at Debian Med / vmatch


Commits:
82c499ef by Sascha Steinbiss at 2020-01-21T22:45:53+01:00
source upload

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+vmatch (2.3.1+dfsg-2) unstable; urgency=medium
+
+  * Source upload to allow for testing migration.
+
+ -- Sascha Steinbiss   Tue, 21 Jan 2020 22:42:18 +0100
+
 vmatch (2.3.1+dfsg-1) unstable; urgency=medium
 
   * Sync packaged version with upstream tags.



View it on GitLab: 
https://salsa.debian.org/med-team/vmatch/commit/82c499ef2fb481ccabcb53104558b9741ffa4f0f

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[med-svn] [Git][med-team/vmatch] Pushed new tag debian/2.3.1+dfsg-1

2020-01-21 Thread Sascha Steinbiss


Sascha Steinbiss pushed new tag debian/2.3.1+dfsg-1 at Debian Med / vmatch

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[med-svn] [Git][med-team/libucsc][pristine-tar] pristine-tar data for libucsc_0.0+git20200121.ba14f430+dfsg.orig.tar.xz

2020-01-21 Thread Andreas Tille


Andreas Tille pushed to branch pristine-tar at Debian Med / libucsc


Commits:
4a4935dc by Andreas Tille at 2020-01-21T22:01:25+01:00
pristine-tar data for libucsc_0.0+git20200121.ba14f430+dfsg.orig.tar.xz

- - - - -


2 changed files:

- + libucsc_0.0+git20200121.ba14f430+dfsg.orig.tar.xz.delta
- + libucsc_0.0+git20200121.ba14f430+dfsg.orig.tar.xz.id


Changes:

=
libucsc_0.0+git20200121.ba14f430+dfsg.orig.tar.xz.delta
=
Binary files /dev/null and 
b/libucsc_0.0+git20200121.ba14f430+dfsg.orig.tar.xz.delta differ


=
libucsc_0.0+git20200121.ba14f430+dfsg.orig.tar.xz.id
=
@@ -0,0 +1 @@
+3b97460774c9d56aa75783ca7712e854ede6ce0f



View it on GitLab: 
https://salsa.debian.org/med-team/libucsc/commit/4a4935dcac75b7c56292ca9f71edee2330b4fb97

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[med-svn] [Git][med-team/libucsc][upstream] New upstream version 0.0+git20200121.ba14f430+dfsg

2020-01-21 Thread Andreas Tille


Andreas Tille pushed to branch upstream at Debian Med / libucsc


Commits:
6dff5191 by Andreas Tille at 2020-01-21T22:01:13+01:00
New upstream version 0.0+git20200121.ba14f430+dfsg
- - - - -


30 changed files:

- src/blat/version.doc
- src/blatz/server.c
- src/htslib/knetfile.c
- src/htslib/vcf.c
- src/inc/bamFile.h
- src/inc/basicBed.h
- src/inc/bigBed.h
- src/inc/bigWig.h
- src/inc/cheapcgi.h
- src/inc/common.h
- src/inc/common.mk
- src/inc/dnautil.h
- src/inc/dystring.h
- src/inc/fieldedTable.h
- src/inc/genoFind.h
- src/inc/genomeRangeTree.h
- src/inc/hash.h
- src/inc/htmlColor.h
- src/inc/htmlPage.h
- src/inc/internet.h
- src/inc/jsonParse.h
- + src/inc/jsonQuery.h
- src/inc/linefile.h
- src/inc/localmem.h
- src/inc/net.h
- src/inc/obscure.h
- src/inc/psGfx.h
- src/inc/psl.h
- src/inc/rql.h
- src/inc/rudp.h


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/libucsc/commit/6dff51910c138d32c161af342b48a603329d0840

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[med-svn] [Git][med-team/libucsc] Pushed new tag upstream/0.0+git20200121.ba14f430+dfsg

2020-01-21 Thread Andreas Tille


Andreas Tille pushed new tag upstream/0.0+git20200121.ba14f430+dfsg at Debian 
Med / libucsc

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[med-svn] [Git][med-team/libucsc][master] 8 commits: New upstream version 0.0+git20200121.ba14f430+dfsg

2020-01-21 Thread Andreas Tille


Andreas Tille pushed to branch master at Debian Med / libucsc


Commits:
6dff5191 by Andreas Tille at 2020-01-21T22:01:13+01:00
New upstream version 0.0+git20200121.ba14f430+dfsg
- - - - -
e1ba19fd by Andreas Tille at 2020-01-21T22:01:13+01:00
routine-update: New upstream version

- - - - -
72071800 by Andreas Tille at 2020-01-21T22:01:25+01:00
Update upstream source from tag upstream/0.0+git20200121.ba14f430+dfsg

Update to upstream version 0.0+git20200121.ba14f430+dfsg
with Debian dir 72fe35d20c9ca4a7d2e888e08c6e4302943b7676
- - - - -
e0f044b7 by Andreas Tille at 2020-01-21T22:01:25+01:00
routine-update: debhelper-compat 12

- - - - -
49858c0e by Andreas Tille at 2020-01-21T22:01:29+01:00
routine-update: Secure URI in copyright format

- - - - -
6cbd8393 by Andreas Tille at 2020-01-21T22:01:37+01:00
Use secure URI in Homepage field.

Fixes: lintian: homepage-field-uses-insecure-uri
See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html

- - - - -
6d3407ca by Andreas Tille at 2020-01-21T22:01:45+01:00
Set upstream metadata fields: Bug-Database, Bug-Submit.

Fixes: lintian: upstream-metadata-file-is-missing
See-also: https://lintian.debian.org/tags/upstream-metadata-file-is-missing.html

- - - - -
b205fae9 by Andreas Tille at 2020-01-21T22:03:35+01:00
Cleanup d/changelog from automatic changes

- - - - -


30 changed files:

- debian/changelog
- − debian/compat
- debian/control
- debian/copyright
- + debian/upstream/metadata
- src/blat/version.doc
- src/blatz/server.c
- src/htslib/knetfile.c
- src/htslib/vcf.c
- src/inc/bamFile.h
- src/inc/basicBed.h
- src/inc/bigBed.h
- src/inc/bigWig.h
- src/inc/cheapcgi.h
- src/inc/common.h
- src/inc/common.mk
- src/inc/dnautil.h
- src/inc/dystring.h
- src/inc/fieldedTable.h
- src/inc/genoFind.h
- src/inc/genomeRangeTree.h
- src/inc/hash.h
- src/inc/htmlColor.h
- src/inc/htmlPage.h
- src/inc/internet.h
- src/inc/jsonParse.h
- + src/inc/jsonQuery.h
- src/inc/linefile.h
- src/inc/localmem.h
- src/inc/net.h


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/libucsc/compare/e5201eabef2170db5330150430d660d26acd612e...b205fae9d544fd1ec7bc81a6489b8dd5e7bc29fc

-- 
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[med-svn] [Git][med-team/mrtrix3][master] 2 commits: I've never seen such a confusing way to set symlinks, but fix symlink for...

2020-01-21 Thread Andreas Tille


Andreas Tille pushed to branch master at Debian Med / mrtrix3


Commits:
5465fd82 by Andreas Tille at 2020-01-21T15:25:05+01:00
Ive never seen such a confusing way to set symlinks, but fix symlink for 
manpage in the same manner

- - - - -
f6ac4edc by Andreas Tille at 2020-01-21T16:24:54+01:00
Upload to unstable

- - - - -


2 changed files:

- debian/changelog
- debian/rules


Changes:

=
debian/changelog
=
@@ -1,4 +1,4 @@
-mrtrix3 (3.0~rc3+git135-g2b8e7d0c2-4) UNRELEASED; urgency=medium
+mrtrix3 (3.0~rc3+git135-g2b8e7d0c2-4) unstable; urgency=medium
 
   * Team upload.
   * QT4 -> Qt5
@@ -16,8 +16,10 @@ mrtrix3 (3.0~rc3+git135-g2b8e7d0c2-4) UNRELEASED; 
urgency=medium
 debian/mrtrix3.desktop.
   * Use secure URI in Homepage field.
   * Set upstream metadata fields: Bug-Database, Bug-Submit.
+  * Fix symlink for manpage
+Closes: #916775
 
- -- Andreas Tille   Mon, 20 Jan 2020 21:42:52 +0100
+ -- Andreas Tille   Tue, 21 Jan 2020 15:26:59 +0100
 
 mrtrix3 (3.0~rc3+git135-g2b8e7d0c2-3) unstable; urgency=medium
 


=
debian/rules
=
@@ -49,7 +49,7 @@ override_dh_link:
for f in debian/mrtrix3/usr/lib/mrtrix3/bin/mrview; do \
bn=$$(basename $$f); \
echo "usr/lib/mrtrix3/bin/$$bn usr/bin/$$bn" >> 
debian/mrtrix3.links; \
-   echo "/usr/share/man/man1/mrtrix.1.gz 
/usr/share/man/man1/$$bn.1.gz" >> debian/mrtrix3.links; \
+   echo "/usr/share/man/man1/mrtrix3.1.gz 
/usr/share/man/man1/$$bn.1.gz" >> debian/mrtrix3.links; \
done
echo "/usr/share/mrtrix3/matlab $(MATLAB_MDIR)/mrtrix" >> 
debian/mrtrix3.links
echo "/usr/share/mrtrix3/matlab $(MDIR)/mrtrix" >> debian/mrtrix3.links



View it on GitLab: 
https://salsa.debian.org/med-team/mrtrix3/compare/06ef80d672fae91f2d879d61762d99ec8e75166b...f6ac4edc6ae92eb28ed6d58e669c55941eac486b

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View it on GitLab: 
https://salsa.debian.org/med-team/mrtrix3/compare/06ef80d672fae91f2d879d61762d99ec8e75166b...f6ac4edc6ae92eb28ed6d58e669c55941eac486b
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[med-svn] [Git][med-team/mrtrix3] Pushed new tag debian/3.0_rc3+git135-g2b8e7d0c2-4

2020-01-21 Thread Andreas Tille


Andreas Tille pushed new tag debian/3.0_rc3+git135-g2b8e7d0c2-4 at Debian Med / 
mrtrix3

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[med-svn] [Git][med-team/nibabel][master] 12 commits: New upstream version 2.3.0

2020-01-21 Thread Andreas Tille


Andreas Tille pushed to branch master at Debian Med / nibabel


Commits:
c02628c2 by Andreas Tille at 2018-10-08T09:01:28+02:00
New upstream version 2.3.0
- - - - -
e77bac29 by Andreas Tille at 2018-10-14T07:50:36+02:00
New upstream version 2.3.0+git20181012.791678e
- - - - -
d65e231e by Andreas Tille at 2020-01-20T10:40:30+01:00
Take over package in Debian Med team maintenance

- - - - -
acf8183a by Andreas Tille at 2020-01-20T10:46:22+01:00
cme fix dpkg-control

- - - - -
e68295a1 by Andreas Tille at 2020-01-20T10:48:15+01:00
Breaks+Replaces: python-nibabel

- - - - -
af2ac28d by Andreas Tille at 2020-01-20T10:58:16+01:00
Use default Debian Med repository layout for Git repository

- - - - -
0e450b2c by Andreas Tille at 2020-01-20T11:00:14+01:00
New upstream version 2.5.1
- - - - -
d881c7f7 by Andreas Tille at 2020-01-20T11:00:41+01:00
Update upstream source from tag upstream/2.5.1

Update to upstream version 2.5.1
with Debian dir 905b9e84626508f2c05dd7e390d79e644aa289e5
- - - - -
2af1e1ee by Andreas Tille at 2020-01-20T11:09:23+01:00
Upload to unstable

- - - - -
4be2491b by Andreas Tille at 2020-01-21T09:27:27+01:00
New upstream version 2.5.1
- - - - -
cfa8d5a0 by Andreas Tille at 2020-01-21T09:27:45+01:00
Update upstream source from tag upstream/2.5.1

Update to upstream version 2.5.1
with Debian dir 905b9e84626508f2c05dd7e390d79e644aa289e5
- - - - -
aa470c5d by Andreas Tille at 2020-01-21T09:29:19+01:00
Upload to unstable

- - - - -


9 changed files:

- debian/changelog
- − nibabel-data/nipy-ecattest
- − nibabel-data/nitest-balls1
- − nibabel-data/nitest-cifti2
- − nibabel-data/nitest-dicom
- − nibabel-data/nitest-freesurfer
- − nibabel-data/nitest-minc2
- − nibabel-data/parrec_oblique
- nibabel/COMMIT_INFO.txt


Changes:

=
debian/changelog
=
@@ -1,4 +1,4 @@
-nibabel (2.5.1-3) UNRELEASED; urgency=medium
+nibabel (2.5.1-3) unstable; urgency=medium
 
   * Team upload.
   * Take over package in Debian Med team maintenance
@@ -10,7 +10,7 @@ nibabel (2.5.1-3) UNRELEASED; urgency=medium
 Closes: #948372
   * Use default Debian Med repository layout for Git repository
 
- -- Andreas Tille   Mon, 20 Jan 2020 10:40:02 +0100
+ -- Andreas Tille   Mon, 20 Jan 2020 11:00:59 +0100
 
 nibabel (2.5.1-2) unstable; urgency=medium
 


=
nibabel-data/nipy-ecattest deleted
=
@@ -1 +0,0 @@
-Subproject commit 9a0a592057bc16894c20c77b03ea1ebb5f8ca8f9


=
nibabel-data/nitest-balls1 deleted
=
@@ -1 +0,0 @@
-Subproject commit 2cd07d86e2cc2d3c612d5d4d659daccd7a58f126


=
nibabel-data/nitest-cifti2 deleted
=
@@ -1 +0,0 @@
-Subproject commit 26b7cb95d76066b93fd2ee65121b9bdb7e034713


=
nibabel-data/nitest-dicom deleted
=
@@ -1 +0,0 @@
-Subproject commit ff6844f3a5ef79974c5809a79314c98fd81693cf


=
nibabel-data/nitest-freesurfer deleted
=
@@ -1 +0,0 @@
-Subproject commit 0d307865704df71c3b2248139714806aad47139d


=
nibabel-data/nitest-minc2 deleted
=
@@ -1 +0,0 @@
-Subproject commit c835bd43f40069d542f75386551ed0fd2377462a


=
nibabel-data/parrec_oblique deleted
=
@@ -1 +0,0 @@
-Subproject commit 45d4d44e1783a814cc50990c2a0cca2fd38b245c


=
nibabel/COMMIT_INFO.txt
=
@@ -1,6 +1,6 @@
 # This is an ini file that may contain information about the code state
 [commit hash]
 # The line below may contain a valid hash if it has been substituted during 
'git archive'
-archive_subst_hash=$Format:%h$
+archive_subst_hash=a616f7f9
 # This line may be modified by the install process
 install_hash=



View it on GitLab: 
https://salsa.debian.org/med-team/nibabel/compare/6d5ba0a2004535b626b0c7ea295d825e69bd2acf...aa470c5d6bec9d4a6d25351c648cd5770ad4f1b2

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[med-svn] [Git][med-team/nibabel][pristine-tar] pristine-tar data for nibabel_2.5.1.orig.tar.gz

2020-01-21 Thread Andreas Tille


Andreas Tille pushed to branch pristine-tar at Debian Med / nibabel


Commits:
2dc56934 by Andreas Tille at 2020-01-21T09:27:45+01:00
pristine-tar data for nibabel_2.5.1.orig.tar.gz

- - - - -


1 changed file:

- nibabel_2.5.1.orig.tar.gz.delta


Changes:

=
nibabel_2.5.1.orig.tar.gz.delta
=
Binary files a/nibabel_2.5.1.orig.tar.gz.delta and 
b/nibabel_2.5.1.orig.tar.gz.delta differ



View it on GitLab: 
https://salsa.debian.org/med-team/nibabel/commit/2dc56934f5991933eef066e6c32e8507f7de4ebb

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[med-svn] [Git][med-team/nibabel] Pushed new tag upstream/2.5.1

2020-01-21 Thread Andreas Tille


Andreas Tille pushed new tag upstream/2.5.1 at Debian Med / nibabel

-- 
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[med-svn] [Git][med-team/nibabel][master] 2 commits: Breaks+Replaces: python-nibabel

2020-01-21 Thread Andreas Tille


Andreas Tille pushed to branch master at Debian Med / nibabel


Commits:
eaf839d5 by Andreas Tille at 2020-01-21T09:23:49+01:00
Breaks+Replaces: python-nibabel

- - - - -
6d5ba0a2 by Andreas Tille at 2020-01-21T09:24:04+01:00
Use default Debian Med repository layout for Git repository

- - - - -


3 changed files:

- debian/changelog
- debian/control
- − debian/gbp.conf


Changes:

=
debian/changelog
=
@@ -6,6 +6,9 @@ nibabel (2.5.1-3) UNRELEASED; urgency=medium
  - Priotity optional instead of extra
  - Drop some unneeded versioned dependencies
  - Formatting
+  * Breaks+Replaces: python-nibabel
+Closes: #948372
+  * Use default Debian Med repository layout for Git repository
 
  -- Andreas Tille   Mon, 20 Jan 2020 10:40:02 +0100
 


=
debian/control
=
@@ -37,6 +37,8 @@ Recommends: python3-dicom,
 python3-fuse
 Suggests: python-nibabel-doc,
   python3-mock
+Breaks: python-nibabel
+Replaces: python-nibabel
 Description: Python3 bindings to various neuroimaging data formats
  NiBabel provides read and write access to some common medical and
  neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI,


=
debian/gbp.conf deleted
=
@@ -1,8 +0,0 @@
-[DEFAULT]
-# the default branch for upstream sources:
-upstream-branch = releases
-# the default branch for the debian patch:
-debian-branch = dist/debian/proper
-# the default tag formats used:
-upstream-tag = %(version)s
-debian-tag = debian/%(version)s



View it on GitLab: 
https://salsa.debian.org/med-team/nibabel/compare/22f42fc28084ad15dc6072b4edc919ebaaa7fe9c...6d5ba0a2004535b626b0c7ea295d825e69bd2acf

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