[med-svn] [Git][med-team/gdcm][pristine-tar] pristine-tar data for gdcm_3.0.1.orig.tar.gz

2019-07-30 Thread Gert Wollny


Gert Wollny pushed to branch pristine-tar at Debian Med / gdcm


Commits:
06c8dfe6 by Gert Wollny at 2019-07-30T12:06:48Z
pristine-tar data for gdcm_3.0.1.orig.tar.gz

- - - - -


2 changed files:

- + gdcm_3.0.1.orig.tar.gz.delta
- + gdcm_3.0.1.orig.tar.gz.id


Changes:

=
gdcm_3.0.1.orig.tar.gz.delta
=
Binary files /dev/null and b/gdcm_3.0.1.orig.tar.gz.delta differ


=
gdcm_3.0.1.orig.tar.gz.id
=
@@ -0,0 +1 @@
+99f56fc6ede99d3a7a27f3e8a8cf07106399cd56



View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/06c8dfe6f02a4ab8d1fba93996fe9c4948010da3

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[med-svn] [Git][med-team/gdcm][master] 5 commits: back to make?

2019-07-30 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
4dfd95dd by Gert Wollny at 2019-07-11T15:37:24Z
back to make?

- - - - -
7268d99c by Gert Wollny at 2019-07-30T12:06:31Z
New upstream version 3.0.1
- - - - -
8e698f6e by Gert Wollny at 2019-07-30T12:06:48Z
Update upstream source from tag upstream/3.0.1

Update to upstream version 3.0.1
with Debian dir b5f27117a2d34b48fd244cd6cee348a2eb73fa4f
- - - - -
260d1ace by Gert Wollny at 2019-07-30T12:12:16Z
d/p/disable patches that where applied upstream

- - - - -
53e733b8 by Gert Wollny at 2019-07-30T12:13:14Z
Update changelog

- - - - -


30 changed files:

- .travis.yml
- Applications/Cxx/gdcmanon.cxx
- Applications/Cxx/gdcmdump.cxx
- Applications/Cxx/gdcmimg.cxx
- CMake/CMakeDetermineCSharpCompiler.cmake
- CMake/FindCharLS.cmake
- CMake/FindMONO.cmake
- CMake/UseCSharp.cmake
- CMake/UseJavaTest.cmake
- CMake/UsePythonTest.cmake
- CMakeLists.txt
- Examples/Cxx/DumpExamCard.cxx
- + Examples/Python/AddPrivateAttribute.py
- Source/Common/CMakeLists.txt
- Source/Common/gdcmTrace.h
- Source/Common/gdcmUnpacker12Bits.cxx
- Source/DataDictionary/gdcmSOPClassUIDToIOD.cxx
- Source/DataDictionary/gdcmUIDs.cxx
- Source/DataDictionary/gdcmUIDs.h
- Source/DataStructureAndEncodingDefinition/gdcmByteSwapFilter.cxx
- Source/DataStructureAndEncodingDefinition/gdcmByteValue.cxx
- Source/DataStructureAndEncodingDefinition/gdcmByteValue.h
- Source/DataStructureAndEncodingDefinition/gdcmCSAHeader.cxx
- Source/DataStructureAndEncodingDefinition/gdcmDataElement.h
- Source/DataStructureAndEncodingDefinition/gdcmDataSet.h
- Source/DataStructureAndEncodingDefinition/gdcmElement.h
- Source/DataStructureAndEncodingDefinition/gdcmMediaStorage.cxx
- Source/DataStructureAndEncodingDefinition/gdcmMediaStorage.h
- Source/DataStructureAndEncodingDefinition/gdcmPDBHeader.cxx
- Source/DataStructureAndEncodingDefinition/gdcmReader.cxx


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/compare/a8eac83ed2ec7921e50f5c228377845b3ca03820...53e733b85ff7a7483a93f413d4b1d46185a59c86

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https://salsa.debian.org/med-team/gdcm/compare/a8eac83ed2ec7921e50f5c228377845b3ca03820...53e733b85ff7a7483a93f413d4b1d46185a59c86
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[med-svn] [Git][med-team/gdcm][upstream] New upstream version 3.0.1

2019-07-30 Thread Gert Wollny


Gert Wollny pushed to branch upstream at Debian Med / gdcm


Commits:
7268d99c by Gert Wollny at 2019-07-30T12:06:31Z
New upstream version 3.0.1
- - - - -


30 changed files:

- .travis.yml
- Applications/Cxx/gdcmanon.cxx
- Applications/Cxx/gdcmdump.cxx
- Applications/Cxx/gdcmimg.cxx
- CMake/CMakeDetermineCSharpCompiler.cmake
- CMake/FindCharLS.cmake
- CMake/FindMONO.cmake
- CMake/UseCSharp.cmake
- CMake/UseJavaTest.cmake
- CMake/UsePythonTest.cmake
- CMakeLists.txt
- Examples/Cxx/DumpExamCard.cxx
- + Examples/Python/AddPrivateAttribute.py
- Source/Common/CMakeLists.txt
- Source/Common/gdcmTrace.h
- Source/Common/gdcmUnpacker12Bits.cxx
- Source/DataDictionary/gdcmSOPClassUIDToIOD.cxx
- Source/DataDictionary/gdcmUIDs.cxx
- Source/DataDictionary/gdcmUIDs.h
- Source/DataStructureAndEncodingDefinition/gdcmByteSwapFilter.cxx
- Source/DataStructureAndEncodingDefinition/gdcmByteValue.cxx
- Source/DataStructureAndEncodingDefinition/gdcmByteValue.h
- Source/DataStructureAndEncodingDefinition/gdcmCSAHeader.cxx
- Source/DataStructureAndEncodingDefinition/gdcmDataElement.h
- Source/DataStructureAndEncodingDefinition/gdcmDataSet.h
- Source/DataStructureAndEncodingDefinition/gdcmElement.h
- Source/DataStructureAndEncodingDefinition/gdcmMediaStorage.cxx
- Source/DataStructureAndEncodingDefinition/gdcmMediaStorage.h
- Source/DataStructureAndEncodingDefinition/gdcmPDBHeader.cxx
- Source/DataStructureAndEncodingDefinition/gdcmReader.cxx


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/7268d99c3ead4f06dae5fb0d3c1ef6d9969de47c

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[med-svn] [Git][med-team/gdcm][master] Correct library

2019-07-11 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
a8eac83e by Gert Wollny at 2019-07-11T13:23:11Z
Correct library

- - - - -


1 changed file:

- debian/patches/fix_charls_2.patch


Changes:

=
debian/patches/fix_charls_2.patch
=
@@ -39,3 +39,14 @@ Author: Gert Wollny 
  #else
  #include "gdcmcharls/charls.h"
  #include "gdcmcharls/publictypes.h"
+--- a/CMakeLists.txt
 b/CMakeLists.txt
+@@ -367,7 +367,7 @@
+ 
+ if(GDCM_USE_SYSTEM_CHARLS)
+   find_package(CharLS 2.0.0 REQUIRED)
+-  set(GDCM_CHARLS_LIBRARIES ${CHARLS_LIBRARIES})
++  set(GDCM_CHARLS_LIBRARIES ${CHARLS_LIBRARY})
+ else()
+   set(GDCM_CHARLS_LIBRARIES gdcmcharls)
+ endif()



View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/a8eac83ed2ec7921e50f5c228377845b3ca03820

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[med-svn] [Git][med-team/gdcm][master] Correct charls patch again

2019-07-11 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
ae119666 by Gert Wollny at 2019-07-11T12:49:26Z
Correct charls patch again

- - - - -


1 changed file:

- debian/patches/fix_charls_2.patch


Changes:

=
debian/patches/fix_charls_2.patch
=
@@ -25,3 +25,17 @@ Author: Gert Wollny 
0, encoding is lossless. If it is non-zero, then encoding is lossy. The
value of 3 is often suggested as a default.
  
+--- a/Utilities/gdcm_charls.h
 b/Utilities/gdcm_charls.h
+@@ -20,11 +20,6 @@
+ // It is expected that version 2.0.0 is used
+ # include 
+ # include 
+-# include 
+-# include 
+-# include 
+-# include 
+-# include 
+ #else
+ #include "gdcmcharls/charls.h"
+ #include "gdcmcharls/publictypes.h"



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https://salsa.debian.org/med-team/gdcm/commit/ae119666a4a5c96134ddade2f78152ff984777ad

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[med-svn] [Git][med-team/gdcm][master] Fix error out in ci script

2019-07-11 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
a855b22b by Gert Wollny at 2019-07-11T12:24:07Z
Fix error out in ci script

- - - - -


1 changed file:

- debian/.gitlab-ci.yml


Changes:

=
debian/.gitlab-ci.yml
=
@@ -11,5 +11,5 @@ build:
 - git checkout master
 - git pull 
 # silence build to not exceed build log size of gitlab-ci
-- gbp buildpackage -uc -us 2>&1 >../build.log ||  tail -n 100 ../build.log
+- gbp buildpackage -uc -us 2>&1 >../build.log ||  tail -n 100 ../build.log 
&& exit 1
 



View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/a855b22b46c873b1f98859ebc642d9915f8a5a0c

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[med-svn] [Git][med-team/gdcm][master] Get some log output on failure

2019-07-11 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
240849c3 by Gert Wollny at 2019-07-11T10:57:21Z
Get some log output on failure

- - - - -


1 changed file:

- debian/.gitlab-ci.yml


Changes:

=
debian/.gitlab-ci.yml
=
@@ -11,6 +11,5 @@ build:
 - git checkout master
 - git pull 
 # silence build to not exceed build log size of gitlab-ci
-- gbp buildpackage -uc -us 2>&1 >../build.log
-- tail -n 100 ../build.log
+- gbp buildpackage -uc -us 2>&1 >../build.log ||  tail -n 100 ../build.log
 



View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/240849c32d38661f28ed07131d23d6c286cb080b

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[med-svn] [Git][med-team/gdcm][master] 3 commits: d/p: Update patches

2019-07-11 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
658a5bdd by Gert Wollny at 2019-07-09T13:29:51Z
d/p: Update patches

- - - - -
dab12370 by Gert Wollny at 2019-07-11T10:43:16Z
d/p: re-add charLS-2.0 fix

- - - - -
36e6c8ea by Gert Wollny at 2019-07-11T10:43:52Z
Update d/changelog

- - - - -


5 changed files:

- debian/changelog
- debian/patches/series
- − debian/patches/unforce_cxx98.patch
- debian/patches/use_swig_add_library_for_csharp.patch
- − debian/patches/use_system_findjni.patch


Changes:

=
debian/changelog
=
@@ -3,8 +3,9 @@ gdcm (3.0.0-1) UNRELEASED; urgency=medium
   * d/watch: update to version 4 of watch file
   * New upstream version 3.0.0
   * d/ Update to new 3.0 so version
+  * d/p: Update patches
 
- -- Gert Wollny   Tue, 09 Jul 2019 09:17:52 +0200
+ -- Gert Wollny   Thu, 11 Jul 2019 12:43:29 +0200
 
 gdcm (2.8.9-1~exp1) experimental; urgency=medium
 


=
debian/patches/series
=
@@ -1,8 +1,8 @@
 02_fixhurd.patch
 03_linkvtkdoc.patch
 04_multiarch.patch
-use_system_findjni.patch
-unforce_cxx98.patch
+#use_system_findjni.patch
+#unforce_cxx98.patch
 use_swig_add_library_for_csharp.patch
 enable_ninja_build.patch
 add_cxx11_vtk_defines.patch


=
debian/patches/unforce_cxx98.patch deleted
=
@@ -1,14 +0,0 @@
-Description: removed the forced -std=c++98
- GDCM includes headers that require at least -std=c++11
-Author: Gert Wollny 
-
 a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -18,7 +18,6 @@
-   cmake_policy(SET CMP0074 NEW)
- endif()
- project(GDCM)
--set(CMAKE_CXX_STANDARD 98)
- set(CMAKE_CXX_EXTENSIONS OFF)
- mark_as_advanced(CMAKE_BACKWARDS_COMPATIBILITY CMAKE_BUILD_TYPE 
CMAKE_INSTALL_PREFIX)
- set(GDCM_CMAKE_DIR "${GDCM_SOURCE_DIR}/CMake" CACHE INTERNAL "")


=
debian/patches/use_swig_add_library_for_csharp.patch
=
@@ -2,7 +2,7 @@ Description: Use_swig_add_library_for_csharp
 Author: Gert Wollny 
 --- a/Wrapping/Csharp/CMakeLists.txt
 +++ b/Wrapping/Csharp/CMakeLists.txt
-@@ -23,7 +23,8 @@
+@@ -27,7 +27,8 @@
  set(CMAKE_SWIG_FLAGS "-namespace gdcm -dllimport gdcmsharpglue")
  separate_arguments(CMAKE_SWIG_FLAGS)
  # libgdksharpglue.so


=
debian/patches/use_system_findjni.patch deleted
=
@@ -1,87 +0,0 @@
-Description: Use_system_findjni
 a/CMake/FindJNI.cmake
-+++ /dev/null
-@@ -1,83 +0,0 @@
--#  Copyright (c) 2006-2011 Mathieu Malaterre 
--#
--#  Redistribution and use is allowed according to the terms of the New
--#  BSD license.
--#  For details see the accompanying COPYING-CMAKE-SCRIPTS file.
--
--# Make sure to not use FindJNI anymore and prefer FindJavaProperties
--find_package(JavaProperties REQUIRED)
--find_path(JAVA_INCLUDE_PATH jni.h
--  ${JavaProp_JAVA_HOME}/../include
--)
--
--string(TOLOWER ${JavaProp_OS_NAME} include_os_name) # Linux -> linux
--set(JAVA_JNI_MD_INCLUDE_DIRECTORIES
--  ${JAVA_INCLUDE_PATH}/${include_os_name}
--  ${JAVA_INCLUDE_PATH}/win32 # win32
--  ${JAVA_INCLUDE_PATH}/linux # kFreeBSD
--  ${JAVA_INCLUDE_PATH}/solaris # SunOS
--  )
--find_path(JAVA_INCLUDE_PATH2 jni_md.h
--  ${JAVA_JNI_MD_INCLUDE_DIRECTORIES}
--  )
--
--find_path(JAVA_AWT_INCLUDE_PATH jawt.h
--  ${JAVA_INCLUDE_PATH}
--)
--
--set(JAVA_AWT_LIBRARY_DIRECTORIES
--  ${JavaProp_SUN_BOOT_LIBRARY_PATH} # works for linux
--  ${JavaProp_JAVA_HOME}/../lib # works for win32
--  )
--
--foreach(dir ${JAVA_AWT_LIBRARY_DIRECTORIES})
--  set(JAVA_JVM_LIBRARY_DIRECTORIES
--${JAVA_JVM_LIBRARY_DIRECTORIES}
--"${dir}"
--"${dir}/client"
--"${dir}/server"
--)
--endforeach()
--
--find_library(JAVA_AWT_LIBRARY NAMES jawt
--  PATHS ${JAVA_AWT_LIBRARY_DIRECTORIES}
--  )
--
--find_library(JAVA_JVM_LIBRARY NAMES jvm JavaVM
--  PATHS ${JAVA_JVM_LIBRARY_DIRECTORIES}
--  )
--
--# on linux I get this annoying error:
--# Exception in thread "main" java.lang.UnsatisfiedLinkError: 
libvtkgdcmJava.so:
--# libmawt.so: cannot open shared object file: No such file or directory
--
--# let's find this lib here then
--if(UNIX)
--  find_library(JAVA_MAWT_LIBRARY NAMES mawt
--# there is one also in headless but it does not work...
--PATHS ${JavaProp_SUN_BOOT_LIBRARY_PATH}/xawt
--)
--endif()
--
--FIND_PACKAGE_HANDLE_STANDARD_ARGS(JNI  DEFAULT_MSG  JAVA_AWT_LIBRARY 
JAVA_JVM_LIBRARY
--JAVA_INCLUDE_PATH  
JAVA_INCLUDE_PATH2 JAVA_AWT_INCLUDE_PATH)
--
--mark_as_advanced(
--  JAVA_AWT_LIBRARY
--  JAVA_MAWT_LIBRARY
--  JAVA_JVM_LIBRARY
--  JAVA_AWT_INCLUDE_PATH
--  JAVA_INCLUDE_PATH
--  JAVA_INCLUDE_PATH2
--)
--
--set(JNI_LIBRARIES
--  ${JAVA_AWT_LIBRARY}
--  ${JAVA_JVM_LIBRARY}
--)
--

[med-svn] [Git][med-team/gdcm] Pushed new tag upstream/3.0.0

2019-07-09 Thread Gert Wollny


Gert Wollny pushed new tag upstream/3.0.0 at Debian Med / gdcm

-- 
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[med-svn] [Git][med-team/gdcm][pristine-tar] pristine-tar data for gdcm_3.0.0.orig.tar.bz2

2019-07-09 Thread Gert Wollny


Gert Wollny pushed to branch pristine-tar at Debian Med / gdcm


Commits:
4dedff03 by Gert Wollny at 2019-07-09T07:09:26Z
pristine-tar data for gdcm_3.0.0.orig.tar.bz2

- - - - -


2 changed files:

- + gdcm_3.0.0.orig.tar.bz2.delta
- + gdcm_3.0.0.orig.tar.bz2.id


Changes:

=
gdcm_3.0.0.orig.tar.bz2.delta
=
Binary files /dev/null and b/gdcm_3.0.0.orig.tar.bz2.delta differ


=
gdcm_3.0.0.orig.tar.bz2.id
=
@@ -0,0 +1 @@
+2495e81eb731db41356b060122b69bd711fd1acf



View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/4dedff03619df81c95ca344c568a75f935a89101

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[med-svn] [Git][med-team/gdcm][master] 5 commits: d/watch: update to version 4 of watch file

2019-07-09 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
d24577ee by Gert Wollny at 2019-07-09T07:07:57Z
d/watch: update to version 4 of watch file

- - - - -
0ef6bc05 by Gert Wollny at 2019-07-09T07:09:20Z
New upstream version 3.0.0
- - - - -
a4a79545 by Gert Wollny at 2019-07-09T07:09:26Z
Update upstream source from tag upstream/3.0.0

Update to upstream version 3.0.0
with Debian dir 3b3c78df8c04ce0c35342b7942a06f28b3b7727d
- - - - -
68e20068 by Gert Wollny at 2019-07-09T07:17:41Z
d/ Update to new 3.0 so version

- - - - -
f33c6ed2 by Gert Wollny at 2019-07-09T07:18:15Z
Update changelog for test run

- - - - -


30 changed files:

- .travis.yml
- Applications/CMakeLists.txt
- Applications/Cxx/CMakeLists.txt
- Applications/Cxx/gdcmanon.cxx
- Applications/Cxx/gdcmconv.cxx
- Applications/Cxx/gdcmdiff.cxx
- Applications/Cxx/gdcmdump.cxx
- Applications/Cxx/gdcmgendir.cxx
- Applications/Cxx/gdcmimg.cxx
- Applications/Cxx/gdcminfo.cxx
- Applications/Cxx/gdcmpap3.cxx
- Applications/Cxx/gdcmpdf.cxx
- Applications/Cxx/gdcmraw.cxx
- Applications/Cxx/gdcmscanner.cxx
- Applications/Cxx/gdcmscu.cxx
- Applications/Cxx/gdcmtar.cxx
- Applications/Cxx/gdcmxml.cxx
- − CMake/FindJNI.cmake
- CMake/InstallMacros.cmake
- CMakeLists.txt
- Examples/CMakeLists.txt
- Examples/Cxx/DiscriminateVolume.cxx
- Examples/Cxx/DumpADAC.cxx
- Examples/Cxx/DumpExamCard.cxx
- Examples/Cxx/DumpImageHeaderInfo.cxx
- Examples/Cxx/DumpToSQLITE3.cxx
- Examples/Cxx/DumpToshibaDTI.cxx
- Examples/Cxx/FixJAIBugJPEGLS.cxx
- Examples/Cxx/GenAllVR.cxx
- Examples/Cxx/PublicDict.cxx


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/compare/a9570c84c165e52d4157d5ba5979bfe02a17cd89...f33c6ed2e6d573f27fdf4926274f5ac35e0fabe9

-- 
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[med-svn] [Git][med-team/gdcm][upstream] New upstream version 3.0.0

2019-07-09 Thread Gert Wollny


Gert Wollny pushed to branch upstream at Debian Med / gdcm


Commits:
0ef6bc05 by Gert Wollny at 2019-07-09T07:09:20Z
New upstream version 3.0.0
- - - - -


30 changed files:

- .travis.yml
- Applications/CMakeLists.txt
- Applications/Cxx/CMakeLists.txt
- Applications/Cxx/gdcmanon.cxx
- Applications/Cxx/gdcmconv.cxx
- Applications/Cxx/gdcmdiff.cxx
- Applications/Cxx/gdcmdump.cxx
- Applications/Cxx/gdcmgendir.cxx
- Applications/Cxx/gdcmimg.cxx
- Applications/Cxx/gdcminfo.cxx
- Applications/Cxx/gdcmpap3.cxx
- Applications/Cxx/gdcmpdf.cxx
- Applications/Cxx/gdcmraw.cxx
- Applications/Cxx/gdcmscanner.cxx
- Applications/Cxx/gdcmscu.cxx
- Applications/Cxx/gdcmtar.cxx
- Applications/Cxx/gdcmxml.cxx
- − CMake/FindJNI.cmake
- CMake/InstallMacros.cmake
- CMakeLists.txt
- Examples/CMakeLists.txt
- Examples/Cxx/DiscriminateVolume.cxx
- Examples/Cxx/DumpADAC.cxx
- Examples/Cxx/DumpExamCard.cxx
- Examples/Cxx/DumpImageHeaderInfo.cxx
- Examples/Cxx/DumpToSQLITE3.cxx
- Examples/Cxx/DumpToshibaDTI.cxx
- Examples/Cxx/FixJAIBugJPEGLS.cxx
- Examples/Cxx/GenAllVR.cxx
- Examples/Cxx/PublicDict.cxx


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/0ef6bc0564f750753361ce750ef7a5f3502a34e2

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[med-svn] [Git][med-team/dcmtk][master] Add NMU chunk to repo

2019-06-04 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / dcmtk


Commits:
12aad369 by Gert Wollny at 2019-06-04T16:38:19Z
Add NMU chunk to repo

- - - - -


2 changed files:

- debian/changelog
- debian/patches/series


Changes:

=
debian/changelog
=
@@ -5,6 +5,13 @@ dcmtk (3.6.4-3) UNRELEASED; urgency=medium
 
  -- Andreas Tille   Mon, 21 Jan 2019 14:49:16 +0100
 
+dcmtk (3.6.4-2.1) unstable; urgency=medium
+
+  * Non-maintainer upload.
+  * Revert to convenient charls copy for now. Closes: #923433
+
+ -- Mathieu Malaterre   Tue, 28 May 2019 21:39:19 +0200
+
 dcmtk (3.6.4-2) unstable; urgency=medium
 
   * d/rules,d/p/03: Fix DATADIC path, Closes: #913304


=
debian/patches/series
=
@@ -1,8 +1,8 @@
 01_dcmtk_3.6.0-1.patch
-02_system_charls.patch
+#02_system_charls.patch
 03_datadic_install.patch
 04_Fixed-OFoptional-by-introducing-OFalign.patch
 05_performance.patch
 07_dont_export_all_executables.patch
 08_remove_system_processor.patch
-09_charls-2.0.patch
+#09_charls-2.0.patch



View it on GitLab: 
https://salsa.debian.org/med-team/dcmtk/commit/12aad369f3e5a6a4eac78b206a940cad80608bc7

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[med-svn] [Git][med-team/gdcm][master] Upload to experimental

2019-04-30 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
a9570c84 by Gert Wollny at 2019-04-30T15:23:23Z
Upload to experimental

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,6 +1,5 @@
-gdcm (2.8.9-1) UNRELEASED; urgency=medium
+gdcm (2.8.9-1~exp1) experimental; urgency=medium
 
-  * New upstream version 2.8.8
   * New upstream version 2.8.9
   * d/p: remove xsltproc maxdepth and libpoppler patches
 



View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/a9570c84c165e52d4157d5ba5979bfe02a17cd89

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[med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.9-1_exp1

2019-04-30 Thread Gert Wollny


Gert Wollny pushed new tag debian/2.8.9-1_exp1 at Debian Med / gdcm

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[med-svn] [Git][med-team/gdcm][upstream] New upstream version 2.8.9

2019-04-29 Thread Gert Wollny


Gert Wollny pushed to branch upstream at Debian Med / gdcm


Commits:
766b0df0 by Gert Wollny at 2019-04-29T09:01:46Z
New upstream version 2.8.9
- - - - -


30 changed files:

- Applications/Cxx/gdcmanon.cxx
- Applications/Cxx/gdcmimg.cxx
- Applications/Cxx/gdcminfo.cxx
- Applications/Cxx/gdcmpdf.cxx
- Applications/Cxx/gdcmtar.cxx
- CMakeLists.txt
- Source/Common/CMakeLists.txt
- Source/Common/gdcmConfigure.h.in
- Source/Common/gdcmSystem.cxx
- Source/DataDictionary/gdcmDefaultDicts.cxx
- Source/DataDictionary/gdcmPrivateDefaultDicts.cxx
- Source/DataStructureAndEncodingDefinition/gdcmBasicOffsetTable.h
- Source/DataStructureAndEncodingDefinition/gdcmSequenceOfFragments.h
- Source/DataStructureAndEncodingDefinition/gdcmWriter.cxx
- Source/MediaStorageAndFileFormat/gdcmBitmap.cxx
- Source/MediaStorageAndFileFormat/gdcmJPEG12Codec.cxx
- Source/MediaStorageAndFileFormat/gdcmJPEG12Codec.h
- Source/MediaStorageAndFileFormat/gdcmJPEG16Codec.cxx
- Source/MediaStorageAndFileFormat/gdcmJPEG16Codec.h
- Source/MediaStorageAndFileFormat/gdcmJPEG8Codec.cxx
- Source/MediaStorageAndFileFormat/gdcmJPEG8Codec.h
- Source/MediaStorageAndFileFormat/gdcmJPEGBITSCodec.cxx → 
Source/MediaStorageAndFileFormat/gdcmJPEGBITSCodec.hxx
- Source/MediaStorageAndFileFormat/gdcmJPEGLSCodec.cxx
- Source/MediaStorageAndFileFormat/gdcmPNMCodec.cxx
- Source/MediaStorageAndFileFormat/gdcmRLECodec.cxx
- Testing/Source/Common/Cxx/TestSHA1.cxx
- Testing/Source/Common/Cxx/TestSystem1.cxx
- 
Testing/Source/DataStructureAndEncodingDefinition/Cxx/TestFileMetaInformation.cxx
- Utilities/VTK/vtkGDCMPolyDataReader.cxx
- Utilities/doxygen/CMakeLists.txt


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/766b0df0bc9962617432c9e455a7f4000c73e3a6

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[med-svn] [Git][med-team/gdcm][pristine-tar] pristine-tar data for gdcm_2.8.9.orig.tar.bz2

2019-04-29 Thread Gert Wollny


Gert Wollny pushed to branch pristine-tar at Debian Med / gdcm


Commits:
d721d9d7 by Gert Wollny at 2019-04-29T09:01:51Z
pristine-tar data for gdcm_2.8.9.orig.tar.bz2

- - - - -


2 changed files:

- + gdcm_2.8.9.orig.tar.bz2.delta
- + gdcm_2.8.9.orig.tar.bz2.id


Changes:

=
gdcm_2.8.9.orig.tar.bz2.delta
=
Binary files /dev/null and b/gdcm_2.8.9.orig.tar.bz2.delta differ


=
gdcm_2.8.9.orig.tar.bz2.id
=
@@ -0,0 +1 @@
+37cb412336782754e7800b1e2f2734a60d2ea0fa



View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/commit/d721d9d7a44cebbf1fd351c2ccb5179e096ec432

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[med-svn] [Git][med-team/gdcm] Pushed new tag upstream/2.8.9

2019-04-29 Thread Gert Wollny


Gert Wollny pushed new tag upstream/2.8.9 at Debian Med / gdcm

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[med-svn] [Git][med-team/gdcm][master] 5 commits: New upstream version 2.8.8

2019-04-29 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
fa93f977 by Gert Wollny at 2018-10-28T07:45:13Z
New upstream version 2.8.8
- - - - -
766b0df0 by Gert Wollny at 2019-04-29T09:01:46Z
New upstream version 2.8.9
- - - - -
9dcfeed0 by Gert Wollny at 2019-04-29T09:01:51Z
Update upstream source from tag upstream/2.8.9

Update to upstream version 2.8.9
with Debian dir c1015c63638523fc904b14bacd10b824be3d4ce6
- - - - -
d4b31982 by Gert Wollny at 2019-04-29T09:25:49Z
d/p: remove xsltproc maxdepth and libpoppler patches

- - - - -
408b5196 by Gert Wollny at 2019-04-29T09:26:23Z
Update changelog to include new version

- - - - -


30 changed files:

- Applications/Cxx/gdcmanon.cxx
- Applications/Cxx/gdcmimg.cxx
- Applications/Cxx/gdcminfo.cxx
- Applications/Cxx/gdcmpdf.cxx
- Applications/Cxx/gdcmtar.cxx
- CMakeLists.txt
- Source/Common/CMakeLists.txt
- Source/Common/gdcmConfigure.h.in
- Source/Common/gdcmSystem.cxx
- Source/DataDictionary/gdcmDefaultDicts.cxx
- Source/DataDictionary/gdcmPrivateDefaultDicts.cxx
- Source/DataStructureAndEncodingDefinition/gdcmBasicOffsetTable.h
- Source/DataStructureAndEncodingDefinition/gdcmSequenceOfFragments.h
- Source/DataStructureAndEncodingDefinition/gdcmWriter.cxx
- Source/MediaStorageAndFileFormat/gdcmBitmap.cxx
- Source/MediaStorageAndFileFormat/gdcmJPEG12Codec.cxx
- Source/MediaStorageAndFileFormat/gdcmJPEG12Codec.h
- Source/MediaStorageAndFileFormat/gdcmJPEG16Codec.cxx
- Source/MediaStorageAndFileFormat/gdcmJPEG16Codec.h
- Source/MediaStorageAndFileFormat/gdcmJPEG8Codec.cxx
- Source/MediaStorageAndFileFormat/gdcmJPEG8Codec.h
- Source/MediaStorageAndFileFormat/gdcmJPEGBITSCodec.cxx → 
Source/MediaStorageAndFileFormat/gdcmJPEGBITSCodec.hxx
- Source/MediaStorageAndFileFormat/gdcmJPEGLSCodec.cxx
- Source/MediaStorageAndFileFormat/gdcmPNMCodec.cxx
- Source/MediaStorageAndFileFormat/gdcmRLECodec.cxx
- Testing/Source/Common/Cxx/TestSHA1.cxx
- Testing/Source/Common/Cxx/TestSystem1.cxx
- 
Testing/Source/DataStructureAndEncodingDefinition/Cxx/TestFileMetaInformation.cxx
- Utilities/VTK/vtkGDCMPolyDataReader.cxx
- Utilities/doxygen/CMakeLists.txt


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/compare/b8fe96e8ab2339eff85028e16aec0a02f74a36a7...408b519613da6f435c6546862cb58dc2d119692f

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View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/compare/b8fe96e8ab2339eff85028e16aec0a02f74a36a7...408b519613da6f435c6546862cb58dc2d119692f
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[med-svn] [Git][med-team/insighttoolkit] Pushed new tag upstream/4.13.2-dfsg1

2019-04-28 Thread Gert Wollny


Gert Wollny pushed new tag upstream/4.13.2-dfsg1 at Debian Med / insighttoolkit

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[med-svn] [Git][med-team/insighttoolkit][upstream] New upstream version 4.13.2-dfsg1

2019-04-28 Thread Gert Wollny


Gert Wollny pushed to branch upstream at Debian Med / insighttoolkit


Commits:
a82926d1 by Gert Wollny at 2019-04-27T12:47:09Z
New upstream version 4.13.2-dfsg1
- - - - -


30 changed files:

- CMake/CTestCustom.cmake.in
- CMake/ITKModuleEnablement.cmake
- CMake/ITKSetStandardCompilerFlags.cmake
- CMake/itkExternal_FFTW.cmake
- CMakeLists.txt
- + Examples/IO/test/Baseline/DicomSliceReadPythonOutputBaseline.png.sha512
- Modules/Core/Common/include/itkMacro.h
- Modules/Core/Common/include/itkResourceProbe.h
- Modules/Core/Common/include/itkResourceProbe.hxx
- Modules/Core/Transform/include/itkBSplineTransform.hxx
- + 
Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterGaussianKernelNonNullImageOriginTest.nrrd.sha512
- + 
Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterGaussianKernelTest.nrrd.sha512
- + Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest5.png.sha512
- + Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest6.png.sha512
- + 
Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput.png.sha512
- + 
Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput2.png.sha512
- + 
Modules/Filtering/Smoothing/test/Baseline/itkSmoothingRecursiveGaussianImageFilterTestNormalizeScalesOn.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkHuangThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkIntermodesThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkIsoDataThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkLiThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkMomentsThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkOtsuThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkShanbhagThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkTriangleThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkYenThresholdImageFilterTestShort.png.sha512
- + Modules/IO/Bruker/test/Baseline/PV5.1_FSE_INT16.mha.sha512


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/insighttoolkit/commit/a82926d1db41a3f007cf57fbc2d6dc097e162ed3

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[med-svn] [Git][med-team/insighttoolkit][master] 6 commits: d/rules: update version

2019-04-28 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / insighttoolkit


Commits:
5eba44d4 by Gert Wollny at 2019-04-27T12:41:38Z
d/rules: update version

- - - - -
a82926d1 by Gert Wollny at 2019-04-27T12:47:09Z
New upstream version 4.13.2-dfsg1
- - - - -
8e7b0ef8 by Gert Wollny at 2019-04-27T12:47:09Z
Update upstream source from tag upstream/4.13.2-dfsg1

Update to upstream version 4.13.2-dfsg1
with Debian dir 7a7a9a5ceabce6d95ca66558b48e16f0bff0fd9e
- - - - -
d59aeb37 by Gert Wollny at 2019-04-27T12:49:39Z
d/p: remove patch applied upstream

- - - - -
63f6220f by Gert Wollny at 2019-04-27T12:52:04Z
Update changelog

- - - - -
c42aa6bc by Gert Wollny at 2019-04-27T12:53:17Z
Update changelog

- - - - -


30 changed files:

- CMake/CTestCustom.cmake.in
- CMake/ITKModuleEnablement.cmake
- CMake/ITKSetStandardCompilerFlags.cmake
- CMake/itkExternal_FFTW.cmake
- CMakeLists.txt
- + Examples/IO/test/Baseline/DicomSliceReadPythonOutputBaseline.png.sha512
- Modules/Core/Common/include/itkMacro.h
- Modules/Core/Common/include/itkResourceProbe.h
- Modules/Core/Common/include/itkResourceProbe.hxx
- Modules/Core/Transform/include/itkBSplineTransform.hxx
- + 
Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterGaussianKernelNonNullImageOriginTest.nrrd.sha512
- + 
Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterGaussianKernelTest.nrrd.sha512
- + Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest5.png.sha512
- + Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest6.png.sha512
- + 
Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput.png.sha512
- + 
Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput2.png.sha512
- + 
Modules/Filtering/Smoothing/test/Baseline/itkSmoothingRecursiveGaussianImageFilterTestNormalizeScalesOn.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkHuangThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkIntermodesThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkIsoDataThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkLiThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkMomentsThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkOtsuThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkShanbhagThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkTriangleThresholdImageFilterTestShort.png.sha512
- + 
Modules/Filtering/Thresholding/test/Baseline/itkYenThresholdImageFilterTestShort.png.sha512
- + Modules/IO/Bruker/test/Baseline/PV5.1_FSE_INT16.mha.sha512


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/insighttoolkit/compare/5486c8ff6e4c312ebfc93f1f8b8b3d42044210a2...c42aa6bc8f85d7b6aa2e99496f9b07e66f251fe1

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https://salsa.debian.org/med-team/insighttoolkit/compare/5486c8ff6e4c312ebfc93f1f8b8b3d42044210a2...c42aa6bc8f85d7b6aa2e99496f9b07e66f251fe1
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[med-svn] [Git][med-team/insighttoolkit] Pushed new tag debian/4.13.2-dfsg1-1_exp

2019-04-28 Thread Gert Wollny


Gert Wollny pushed new tag debian/4.13.2-dfsg1-1_exp at Debian Med / 
insighttoolkit

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[med-svn] [Git][med-team/castxml][master] Prepare upload to experimental

2019-04-27 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / castxml


Commits:
c01400d5 by Gert Wollny at 2019-04-27T11:24:53Z
Prepare upload to experimental

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,4 +1,4 @@
-castxml (0.2.0-1) UNRELEASED; urgency=medium
+castxml (0.2.0-1) experimental; urgency=medium
 
   * s/watch Add watch file
   * New upstream version 0.2.0 Closes: #927891



View it on GitLab: 
https://salsa.debian.org/med-team/castxml/commit/c01400d59c1bc2fb732ebb76e7f06100efab89fd

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[med-svn] [Git][med-team/castxml] Pushed new tag debian/0.2.0-1

2019-04-27 Thread Gert Wollny


Gert Wollny pushed new tag debian/0.2.0-1 at Debian Med / castxml

-- 
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[med-svn] [Git][med-team/castxml][pristine-tar] pristine-tar data for castxml_0.2.0.orig.tar.gz

2019-04-27 Thread Gert Wollny


Gert Wollny pushed to branch pristine-tar at Debian Med / castxml


Commits:
2fb33f38 by Gert Wollny at 2019-04-27T11:04:41Z
pristine-tar data for castxml_0.2.0.orig.tar.gz

- - - - -


2 changed files:

- + castxml_0.2.0.orig.tar.gz.delta
- + castxml_0.2.0.orig.tar.gz.id


Changes:

=
castxml_0.2.0.orig.tar.gz.delta
=
Binary files /dev/null and b/castxml_0.2.0.orig.tar.gz.delta differ


=
castxml_0.2.0.orig.tar.gz.id
=
@@ -0,0 +1 @@
+21fcb52fcb4e5eddf17f4d9594c527b812603460



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https://salsa.debian.org/med-team/castxml/commit/2fb33f381108d53cc83c2d3d21e46683ad76f60a

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[med-svn] [Git][med-team/castxml] Pushed new tag upstream/0.2.0

2019-04-27 Thread Gert Wollny


Gert Wollny pushed new tag upstream/0.2.0 at Debian Med / castxml

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[med-svn] [Git][med-team/castxml][upstream] New upstream version 0.2.0

2019-04-27 Thread Gert Wollny


Gert Wollny pushed to branch upstream at Debian Med / castxml


Commits:
f32ae1f4 by Gert Wollny at 2019-04-27T11:04:40Z
New upstream version 0.2.0
- - - - -


30 changed files:

- .clang-format
- CMakeLists.txt
- README.rst
- doc/conf.py.in
- doc/manual/castxml.1.rst
- share/castxml/detect_vs.c
- share/castxml/detect_vs.cpp
- src/CMakeLists.txt
- src/Detect.cxx
- src/Output.cxx
- src/RunClang.cxx
- src/Utils.cxx
- src/Utils.h
- src/Version.cmake
- src/castxml.cxx
- src/clang-format.bash
- test/CMakeLists.txt
- test/cc-msvc.c
- + test/expect/castxml1.any.FundamentalType-nullptr.xml.txt
- test/expect/castxml1.any.Typedef-to-Enumeration-anonymous.xml.txt
- test/expect/castxml1.c++11.Class-template-bases.xml.txt
- test/expect/castxml1.c++14.Class-template-bases.xml.txt
- test/expect/castxml1.c++17.Class-template-bases.xml.txt
- test/expect/castxml1.c++98.Class-template-bases.xml.txt
- test/expect/cmd.cc-gnu-c-src-c-E.stdout.txt
- test/expect/cmd.cc-gnu-c-tgt-i386-opt-E.stdout.txt
- test/expect/cmd.cc-gnu-src-cxx-E.stdout.txt
- test/expect/cmd.cc-gnu-tgt-i386-opt-E.stdout.txt
- test/expect/cmd.cc-msvc-builtin-1800-E.stdout.txt
- test/expect/cmd.cc-msvc-builtin-1900-E.stdout.txt


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/castxml/commit/f32ae1f4461d3b61fe4f7004c938d95faf36051f

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[med-svn] [Git][med-team/castxml][master] 5 commits: correct watch file

2019-04-27 Thread Gert Wollny


Gert Wollny pushed to branch master at Debian Med / castxml


Commits:
6863f5ee by Gert Wollny at 2019-04-27T11:04:17Z
correct watch file

- - - - -
f32ae1f4 by Gert Wollny at 2019-04-27T11:04:40Z
New upstream version 0.2.0
- - - - -
c2a046e0 by Gert Wollny at 2019-04-27T11:04:41Z
Update upstream source from tag upstream/0.2.0

Update to upstream version 0.2.0
with Debian dir c48a1e257bf8e05d8e4af54c6cf306a4d5aea1f7
- - - - -
98596723 by Gert Wollny at 2019-04-27T11:06:58Z
d/p/* Update patches

- - - - -
73b82c7e by Gert Wollny at 2019-04-27T11:08:56Z
Update d/changelog

- - - - -


30 changed files:

- .clang-format
- CMakeLists.txt
- README.rst
- debian/changelog
- debian/patches/0002-dont-install-license-file.patch
- − debian/patches/0003-fix-dynamic-linking.patch
- − debian/patches/0004-llvm7.patch
- debian/patches/series
- + debian/watch
- doc/conf.py.in
- doc/manual/castxml.1.rst
- share/castxml/detect_vs.c
- share/castxml/detect_vs.cpp
- src/CMakeLists.txt
- src/Detect.cxx
- src/Output.cxx
- src/RunClang.cxx
- src/Utils.cxx
- src/Utils.h
- src/Version.cmake
- src/castxml.cxx
- src/clang-format.bash
- test/CMakeLists.txt
- test/cc-msvc.c
- + test/expect/castxml1.any.FundamentalType-nullptr.xml.txt
- test/expect/castxml1.any.Typedef-to-Enumeration-anonymous.xml.txt
- test/expect/castxml1.c++11.Class-template-bases.xml.txt
- test/expect/castxml1.c++14.Class-template-bases.xml.txt
- test/expect/castxml1.c++17.Class-template-bases.xml.txt
- test/expect/castxml1.c++98.Class-template-bases.xml.txt


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/castxml/compare/65d31524b500eea7d16409d4ff9d556963f38766...73b82c7eed63a1e024ec87356e7a9e253352a029

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[med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.8-8

2019-03-26 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.8.8-8 at Debian Med / gdcm

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[med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.8-9

2019-03-26 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.8.8-9 at Debian Med / gdcm

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[med-svn] [Git][med-team/gdcm][master] 2 commits: update for new upload

2019-03-08 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
8b6d2e89 by Gert Wollny at 2019-03-08T10:34:25Z
update for new upload

- - - - -
d34f43a6 by Gert Wollny at 2019-03-08T10:34:59Z
Correct target distribution

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,9 +1,10 @@
-gdcm (2.8.8-7) UNRELEASED; urgency=medium
+gdcm (2.8.8-7) unstable; urgency=medium
 
+  [ Gianfranco Costamagna ]
   * Fixup symbols file, mark as optional some symbols disappearing
 with a -O3 build
 
- -- Gianfranco Costamagna   Tue, 15 Jan 2019 
13:12:47 +0100
+ -- Gert Wollny   Fri, 08 Mar 2019 11:33:29 +0100
 
 gdcm (2.8.8-6) unstable; urgency=medium
 



View it on GitLab: 
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[med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.8-7

2019-03-08 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.8.8-7 at Debian Med / gdcm

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[med-svn] [Git][med-team/dicomscope] Pushed new tag debian/3.6.0-20

2019-01-23 Thread Gert Wollny
Gert Wollny pushed new tag debian/3.6.0-20 at Debian Med / dicomscope

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[med-svn] [Git][med-team/dicomscope][master] 3 commits: d/p/remove_Tar..: Add patch to remove use of removed interface, Closes: #919739

2019-01-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / dicomscope


Commits:
9dd909f6 by Gert Wollny at 2019-01-23T09:36:31Z
d/p/remove_Tar..: Add patch to remove use of removed interface, Closes: #919739

- - - - -
6dd5eee5 by Gert Wollny at 2019-01-23T09:37:11Z
Update changelog

- - - - -
3c1df7f2 by Gert Wollny at 2019-01-23T10:20:51Z
Update for upload

- - - - -


3 changed files:

- debian/changelog
- + debian/patches/remove_TargetCipher_calls.patch
- debian/patches/series


Changes:

=
debian/changelog
=
@@ -1,9 +1,14 @@
-dicomscope (3.6.0-20) UNRELEASED; urgency=medium
+dicomscope (3.6.0-20) unstable; urgency=medium
 
+  [ Jelmer Vernooij ]
   * Trim trailing whitespace.
   * Use secure copyright file specification URI.
 
- -- Jelmer Vernooij   Sat, 20 Oct 2018 18:47:24 +
+  [ Gert Wollny ]
+  * d/p/remove_Tar..: Add patch to remove use of removed 
+interface, Closes: #919739
+
+ -- Gert Wollny   Wed, 23 Jan 2019 11:20:35 +0100
 
 dicomscope (3.6.0-19) unstable; urgency=medium
 


=
debian/patches/remove_TargetCipher_calls.patch
=
@@ -0,0 +1,39 @@
+Description: Remove calls to *CipherSuite*
+ These methods have been removed from the according class in dcmtk and it is 
not 
+ clear whether there are alternative code path or whether this is simply no 
longer
+ supported or needed. 
+Author: Gert Wollny 
+Debian-Bug: https://bugs.debian.org/919739
+
+diff -ru dicomscope-3.6.0/interface/libsrc/DVInterface.cpp 
dicomscope-3.6.0.fix/interface/libsrc/DVInterface.cpp
+--- dicomscope-3.6.0/interface/libsrc/DVInterface.cpp  2019-01-23 
10:29:55.0 +0100
 dicomscope-3.6.0.fix/interface/libsrc/DVInterface.cpp  2019-01-23 
10:28:34.947879315 +0100
+@@ -3210,11 +3210,7 @@
+ JNIEXPORT jint JNICALL Java_J2Ci_jDVInterface_getTargetNumberOfCipherSuites
+   (JNIEnv *env, jobject obj, jstring targetID)
+ {
+-DVInterface *dvi = getAddressOfDVInterface (env, obj);
+-char *tid = (char*) env->GetStringUTFChars (targetID, 0);
+-jint res = (jint) dvi->getTargetNumberOfCipherSuites(tid);
+-env->ReleaseStringUTFChars (targetID, tid);
+-return res;
++return 0;
+ }
+ 
+ 
+@@ -3226,13 +3222,7 @@
+ JNIEXPORT jstring JNICALL Java_J2Ci_jDVInterface_getTargetCipherSuite
+   (JNIEnv *env, jobject obj, jstring targetID, jint idx)
+ {
+-DVInterface *dvi = getAddressOfDVInterface (env, obj);
+-char *tid = (char*) env->GetStringUTFChars (targetID, 0);
+-OFString param;
+-const char* res = dvi->getTargetCipherSuite (tid, idx, param);
+-env->ReleaseStringUTFChars (targetID, tid);
+-if (res == NULL) return NULL;
+-return env->NewStringUTF (res);
++return NULL;
+ }
+ 
+ 
+Nur in dicomscope-3.6.0.fix/interface/libsrc: DVInterface.cpp~.


=
debian/patches/series
=
@@ -6,3 +6,4 @@ cmakelists.txt.patch
 correct_status_returns.patch
 correct_include.patch
 openjdk-1.9.patch
+remove_TargetCipher_calls.patch



View it on GitLab: 
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[med-svn] [Git][med-team/dcmtk] Pushed new tag debian/3.6.4-2

2019-01-19 Thread Gert Wollny
Gert Wollny pushed new tag debian/3.6.4-2 at Debian Med / dcmtk

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[med-svn] [Git][med-team/dcmtk][master] 5 commits: d/rules, d/p/03: Fix DATADIC path, closes #913304

2019-01-19 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / dcmtk


Commits:
f15345d8 by Gert Wollny at 2019-01-19T08:56:16Z
d/rules,d/p/03: Fix DATADIC path, closes #913304

- - - - -
cec6f3b4 by Gert Wollny at 2019-01-19T08:56:37Z
Update Changelog

- - - - -
60111ea4 by Gert Wollny at 2019-01-19T09:20:59Z
Fix changelog entry

- - - - -
91666af2 by Gert Wollny at 2019-01-19T09:25:15Z
Update the patch again

- - - - -
8d4169a4 by Gert Wollny at 2019-01-19T09:36:42Z
Update changelog for upload

- - - - -


3 changed files:

- debian/changelog
- debian/patches/03_datadic_install.patch
- debian/rules


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+dcmtk (3.6.4-2) unstable; urgency=medium
+
+  * d/rules,d/p/03: Fix DATADIC path, Closes: #913304
+
+ -- Gert Wollny   Sat, 19 Jan 2019 10:36:10 +0100
+
 dcmtk (3.6.4-1) unstable; urgency=medium
 
   * d/p/09: Fix build with CharLS 2.0


=
debian/patches/03_datadic_install.patch
=
@@ -26,11 +26,11 @@ Author: Mathieu Malaterre 
# Set dictionary path to the data dir inside install main dir (prefix)
if(DCMTK_ENABLE_EXTERNAL_DICTIONARY)
 -set(DCM_DICT_DEFAULT_PATH 
"${DCMTK_PREFIX}${CMAKE_INSTALL_DATADIR}dcmtkdicom.dic")
-+set(DCM_DICT_DEFAULT_PATH 
"${DCMTK_PREFIX}${CMAKE_INSTALL_DATADIC}dcmtkdicom.dic")
++set(DCM_DICT_DEFAULT_PATH 
"${DCMTK_PREFIX}${CMAKE_INSTALL_DATADIC}dicom.dic")
  # If private dictionary should be utilized, add it to default dictionary 
path.
  if(ENABLE_PRIVATE_TAGS)
 -  set(DCM_DICT_DEFAULT_PATH 
"${DCM_DICT_DEFAULT_PATH};${DCMTK_PREFIX}${CMAKE_INSTALL_DATADIR}dcmtkprivate.dic")
-+  set(DCM_DICT_DEFAULT_PATH 
"${DCM_DICT_DEFAULT_PATH};${DCMTK_PREFIX}${CMAKE_INSTALL_DATADIC}dcmtkprivate.dic")
++  set(DCM_DICT_DEFAULT_PATH 
"${DCM_DICT_DEFAULT_PATH};${DCMTK_PREFIX}${CMAKE_INSTALL_DATADIC}private.dic")
  endif()
   # Again, for Windows strip all / from path and replace it with \\.
  string(REGEX REPLACE "/" "" DCM_DICT_DEFAULT_PATH 
"${DCM_DICT_DEFAULT_PATH}")
@@ -39,11 +39,11 @@ Author: Mathieu Malaterre 
# Set dictionary path to the data dir inside install main dir (prefix).
if(DCMTK_ENABLE_EXTERNAL_DICTIONARY)
 -set(DCM_DICT_DEFAULT_PATH 
"${DCMTK_PREFIX}/${CMAKE_INSTALL_DATADIR}/dcmtk/dicom.dic")
-+set(DCM_DICT_DEFAULT_PATH 
"${DCMTK_PREFIX}/${CMAKE_INSTALL_DATADIC}/dcmtk/dicom.dic")
++set(DCM_DICT_DEFAULT_PATH 
"${DCMTK_PREFIX}/${CMAKE_INSTALL_DATADIC}/dicom.dic")
  # If private dictionary should be utilized, add it to default dictionary 
path.
  if(ENABLE_PRIVATE_TAGS)
 -  set(DCM_DICT_DEFAULT_PATH 
"${DCM_DICT_DEFAULT_PATH}:${DCMTK_PREFIX}/${CMAKE_INSTALL_DATADIR}/dcmtk/private.dic")
-+  set(DCM_DICT_DEFAULT_PATH 
"${DCM_DICT_DEFAULT_PATH}:${DCMTK_PREFIX}/${CMAKE_INSTALL_DATADIC}/dcmtk/private.dic")
++  set(DCM_DICT_DEFAULT_PATH 
"${DCM_DICT_DEFAULT_PATH}:${DCMTK_PREFIX}/${CMAKE_INSTALL_DATADIC}/private.dic")
  endif()
else()
  set(DCM_DICT_DEFAULT_PATH "")
@@ -54,8 +54,8 @@ Author: Mathieu Malaterre 
 -install(FILES dicom.dic acrnema.dic private.dic diconde.dic dcm2xml.dtd 
dumppat.txt SC.dump VLP.dump DESTINATION "${CMAKE_INSTALL_DATADIR}/dcmtk" 
COMPONENT data)
 +set(DCMTK_INSTALL_DATDIR "share/libdcmtk${DCMTK_ABI_VERSION}")
 +
-+install(FILES dcm2xml.dtd dumppat.txt SC.dump VLP.dump DESTINATION 
${DCMTK_INSTALL_DATDIR} COMPONENT data)
-+install(FILES dicom.dic acrnema.dic private.dic diconde.dic DESTINATION 
${DCMTK_INSTALL_DATDIC} COMPONENT data)
++install(FILES dcm2xml.dtd dumppat.txt SC.dump VLP.dump DESTINATION 
${CMAKE_INSTALL_DATADIR} COMPONENT data)
++install(FILES dicom.dic acrnema.dic private.dic diconde.dic DESTINATION 
${CMAKE_INSTALL_DATADIC} COMPONENT data)
  
  # add paths to the dictionaries to a CMake variable for being used by the 
unit tests
  set(DCMTK_DICOM_DICTIONARIES


=
debian/rules
=
@@ -38,7 +38,7 @@ CMAKE_EXTRA_FLAGS += -DCMAKE_BUILD_TYPE:STRING=None \
  -DDCMTK_WITH_ICONV:BOOL=ON \
  -DUSE_COMPILER_HIDDEN_VISIBILITY:BOOL=ON \
  -DCMAKE_VERBOSE_MAKEFILE=ON \
- -DDCMTK_INSTALL_DATDIC:STRING=share/libdcmtk14 \
+ -DCMAKE_INSTALL_DATADIC:STRING=share/libdcmtk14 \
  -DCMAKE_SKIP_RPATH:BOOL=OFF \
  -DDCMTK_USE_CXX11_STL:BOOL=ON \
  -DDCMTK_ENABLE_CXX11:BOOL=ON



View it on GitLab: 
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[med-svn] [Git][med-team/aeskulap] Pushed new tag debian/0.2.2-beta2+git20180219.8787e95-2

2019-01-13 Thread Gert Wollny
Gert Wollny pushed new tag debian/0.2.2-beta2+git20180219.8787e95-2 at Debian 
Med / aeskulap

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[med-svn] [Git][med-team/aeskulap][master] Correct changelog

2019-01-13 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / aeskulap


Commits:
d51b2a0e by Gert Wollny at 2019-01-13T11:56:58Z
Correct changelog

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,4 +1,4 @@
-aeskulap (0.2.2-beta2+git20180219.8787e95-2) UNRELEASED; urgency=medium
+aeskulap (0.2.2-beta2+git20180219.8787e95-2) unstable; urgency=medium
 
   * d/p/dcmtk: Add patch to build with dcmtk 3.6.4
 



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[med-svn] [Git][med-team/aeskulap][master] 3 commits: d/p/dcmtk: Add patch to build with dcmtk 3.6.4

2019-01-13 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / aeskulap


Commits:
e9357bf6 by Gert Wollny at 2019-01-13T11:44:19Z
d/p/dcmtk: Add patch to build with dcmtk 3.6.4

- - - - -
c7c80fa0 by Gert Wollny at 2019-01-13T11:44:56Z
Update for upload

- - - - -
2ebd5d57 by Gert Wollny at 2019-01-13T11:47:58Z
switch back to unreleased

- - - - -


3 changed files:

- debian/changelog
- + debian/patches/dcmtk_364.patch
- debian/patches/series


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+aeskulap (0.2.2-beta2+git20180219.8787e95-2) UNRELEASED; urgency=medium
+
+  * d/p/dcmtk: Add patch to build with dcmtk 3.6.4
+
+ -- Gert Wollny   Sun, 13 Jan 2019 12:44:37 +0100
+
 aeskulap (0.2.2-beta2+git20180219.8787e95-1) unstable; urgency=medium
 
   * Revert 8e93d35c8b780fa600a69cacd579a7cb663e3ee8 to bundle


=
debian/patches/dcmtk_364.patch
=
@@ -0,0 +1,43 @@
+Description: Fix build with dcmtk 3.6.4
+Author: Gert Wollny 
+diff -ru aeskulap/imagepool/poolassociation.cpp 
aeskulap-0.2.2b1+git20161206/imagepool/poolassociation.cpp
+--- aeskulap/imagepool/poolassociation.cpp 2018-01-07 14:16:32.988580277 
+0100
 aeskulap-0.2.2b1+git20161206/imagepool/poolassociation.cpp 2019-01-13 
12:19:45.407822113 +0100
+@@ -111,7 +111,7 @@
+   T_DIMSE_C_StoreRSP rsp;
+ 
+   // check if we SOPClass and SOPInstance in dataset
+-  if (!DU_findSOPClassAndInstanceInDataSet(dataset, sopClass, 
sopInstance))
++  if (!DU_findSOPClassAndInstanceInDataSet(dataset, sopClass, 
strlen(sopClass), sopInstance, strlen(sopInstance)))
+   {
+   return DIMSE_BADDATA;
+   }
+diff -ru aeskulap/imagepool/poolfindassociation.cpp 
aeskulap-0.2.2b1+git20161206/imagepool/poolfindassociation.cpp
+--- aeskulap/imagepool/poolfindassociation.cpp 2018-01-07 14:16:32.988580277 
+0100
 aeskulap-0.2.2b1+git20161206/imagepool/poolfindassociation.cpp 
2019-01-13 12:21:01.563821184 +0100
+@@ -56,8 +56,10 @@
+   req.DataSetType = DIMSE_DATASET_PRESENT;
+   req.Priority = DIMSE_PRIORITY_LOW;
+   strcpy(req.AffectedSOPClassUID, m_abstractSyntax);
+-
+-  cond = DIMSE_findUser(assoc, presId, , query, 
++  int response_count = 0;
++  
++  cond = DIMSE_findUser(assoc, presId, , query,
++response_count,
+   findCallback, (void*)this, 
+   (m_timeout == 0) ? DIMSE_BLOCKING : DIMSE_NONBLOCKING,
+   m_timeout, 
+diff -ru aeskulap/imagepool/poolmoveassociation.cpp 
aeskulap-0.2.2b1+git20161206/imagepool/poolmoveassociation.cpp
+--- aeskulap/imagepool/poolmoveassociation.cpp 2019-01-13 12:23:36.991819287 
+0100
 aeskulap-0.2.2b1+git20161206/imagepool/poolmoveassociation.cpp 
2019-01-13 12:22:00.551820464 +0100
+@@ -306,7 +306,8 @@
+   */
+   if (rsp->DimseStatus == STATUS_Success) {
+   /* which SOP class and SOP instance ? */
+-  if (! 
DU_findSOPClassAndInstanceInDataSet(cbdata->dataset, sopClass, sopInstance)) {
++if (! DU_findSOPClassAndInstanceInDataSet(cbdata->dataset, 
sopClass,strlen(sopClass),
++  sopInstance, 
strlen(sopInstance))) {
+   rsp->DimseStatus = 
STATUS_STORE_Error_CannotUnderstand;
+   }
+   else if (strcmp(sopClass, req->AffectedSOPClassUID) != 
0) {


=
debian/patches/series
=
@@ -2,3 +2,4 @@ newDicomElement.patch
 GSettings-configuratio-storage.patch
 remove-appdata.patch
 ignore_gconf_schemas.patch
+dcmtk_364.patch



View it on GitLab: 
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[med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.8-6

2019-01-13 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.8.8-6 at Debian Med / gdcm

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[med-svn] [Git][med-team/mia][master] 3 commits: d/control, d/compat: Update to version 12~ and standards 4.3

2019-01-12 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / mia


Commits:
ce4262ee by Gert Wollny at 2019-01-12T18:22:43Z
d/control, d/compat: Update to version 12~ and standards 4.3

- - - - -
eb141982 by Gert Wollny at 2019-01-12T18:22:43Z
d/rules: remove dh_builddeb -- -Z xz

- - - - -
2ba2dffa by Gert Wollny at 2019-01-12T18:24:16Z
Update changelog for new upload

- - - - -


4 changed files:

- debian/changelog
- debian/compat
- debian/control
- debian/rules


Changes:

=
debian/changelog
=
@@ -1,9 +1,17 @@
-mia (2.4.6-4) UNRELEASED; urgency=medium
+mia (2.4.6-5) UNRELEASED; urgency=medium
 
   * Trim trailing whitespace.
 
  -- Jelmer Vernooij   Wed, 17 Oct 2018 22:23:51 +
 
+mia (2.4.6-4) unstable; urgency=medium
+
+  * d/control, d/compat: Update to version 12~ and standards 4.3
+  * d/rules: remove dh_builddeb -- -Z xz
+
+ -- Gert Wollny   Sat, 12 Jan 2019 19:20:36 +0100
+>>>>>>> Update changelog for new upload
+
 mia (2.4.6-3) unstable; urgency=medium
 
   [ Andreas Tille ]


=
debian/compat
=
@@ -1 +1 @@
-10
+12


=
debian/control
=
@@ -4,7 +4,7 @@ Uploaders: Gert Wollny 
 Section: science
 Priority: optional
 Build-Depends: cmake,
-   debhelper (>= 10.0.0),
+   debhelper (>= 12~),
libblas-dev,
libboost-filesystem-dev,
libboost-serialization-dev,
@@ -32,7 +32,7 @@ Build-Depends-Indep: docbook-xsl,
  graphviz,
  libjs-mathjax,
  xsltproc
-Standards-Version: 4.2.1
+Standards-Version: 4.3.0
 Vcs-Browser: https://salsa.debian.org/med-team/mia
 Vcs-Git: https://salsa.debian.org/med-team/mia.git
 Homepage: http://mia.sourceforge.net


=
debian/rules
=
@@ -39,9 +39,6 @@ override_dh_auto_configure:
-DMIA_CREATE_USERDOC=$(BUILDDOC) \
-DMIA_CREATE_NIPYPE_INTERFACES=ON
 
-override_dh_builddeb:
-   dh_builddeb -- -Z xz
-
 # dh_strip detects executable files, so make *.mia files executable then strip 
then 
 # remove the executable flag 
 override_dh_strip:



View it on GitLab: 
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[med-svn] [Git][med-team/mia] Pushed new tag debian/2.4.6-4

2019-01-12 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.4.6-4 at Debian Med / mia

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[med-svn] [Git][med-team/ginkgocadx] Pushed new tag upstream/3.8.8

2019-01-12 Thread Gert Wollny
Gert Wollny pushed new tag upstream/3.8.8 at Debian Med / ginkgocadx

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[med-svn] [Git][med-team/ginkgocadx] Pushed new tag debian/3.8.8-1

2019-01-12 Thread Gert Wollny
Gert Wollny pushed new tag debian/3.8.8-1 at Debian Med / ginkgocadx

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[med-svn] [Git][med-team/vtk-dicom][master] 9 commits: New upstream version 0.8.8

2019-01-12 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / vtk-dicom


Commits:
8152ec09 by Gert Wollny at 2018-12-01T15:59:23Z
New upstream version 0.8.8
- - - - -
3f888130 by Gert Wollny at 2018-12-01T15:59:30Z
Update upstream source from tag upstream/0.8.8

Update to upstream version 0.8.8
with Debian dir 70bb2e267ed5d0ebf706f1a39cb0378769f00b57
- - - - -
13363c3d by Gert Wollny at 2018-12-01T16:00:58Z
d/control: remove dependency on python  3.7, Closes: #913452

- - - - -
498c466c by Gert Wollny at 2018-12-01T16:01:25Z
Prepare for new upload

- - - - -
228a669b by Gert Wollny at 2018-12-01T16:11:13Z
d/control: Depend only on default python3-dev package, Closes: #912906

- - - - -
48decf8e by Gert Wollny at 2018-12-01T16:27:25Z
d/control,python3-vtk-dicom: use dh_exec for target path, Closes: #905419

- - - - -
39290bf0 by Gert Wollny at 2018-12-01T16:27:55Z
correct changelog

- - - - -
66189949 by Gert Wollny at 2018-12-01T17:25:01Z
d/control: correct dependency on dh-exec

- - - - -
fcac9783 by Gert Wollny at 2018-12-01T17:30:15Z
d/changelog: Update for upload

- - - - -


30 changed files:

- CMake/vtkWrapHierarchy.cmake
- CMakeLists.txt
- Examples/CMakeLists.txt
- Programs/CMakeLists.txt
- Programs/dicomtonifti.cxx
- Programs/niftitodicom.cxx
- Source/CMakeLists.txt
- Source/vtkDICOMCTRectifier.cxx
- Source/vtkDICOMCTRectifier.h
- Source/vtkDICOMDictHash.cxx
- Source/vtkDICOMDictHash.h
- Source/vtkDICOMDirectory.cxx
- Source/vtkDICOMDirectory.h
- Source/vtkDICOMLookupTable.cxx
- Source/vtkDICOMMRGenerator.h
- Source/vtkDICOMSliceSorter.cxx
- Source/vtkDICOMSliceSorter.h
- Source/vtkDICOMUtilities.cxx
- Source/vtkDICOMUtilitiesUIDTable.cxx
- Source/vtkDICOMValue.cxx
- Source/vtkNIFTIReader.cxx
- Source/vtkNIFTIReader.h
- Source/vtkNIFTIWriter.cxx
- Testing/TestDICOMJava.java.in
- Utilities/nemadict.txt
- Utilities/nemauids.txt
- debian/changelog
- debian/control
- debian/python3-vtk-dicom.install
- debian/rules


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/vtk-dicom/compare/6f425cb3beaac850b02072bd408ba44163f5e6d5...fcac97839f737ede7cbbe8425b1f02a33d6a5c35

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[med-svn] [Git][med-team/vtk-dicom] Pushed new tag upstream/0.8.8

2019-01-12 Thread Gert Wollny
Gert Wollny pushed new tag upstream/0.8.8 at Debian Med / vtk-dicom

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[med-svn] [Git][med-team/vtk-dicom] Pushed new tag debian/0.8.8-1

2019-01-12 Thread Gert Wollny
Gert Wollny pushed new tag debian/0.8.8-1 at Debian Med / vtk-dicom

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[med-svn] [Git][med-team/dcmtk] Pushed new tag debian/3.6.4-1

2019-01-12 Thread Gert Wollny
Gert Wollny pushed new tag debian/3.6.4-1 at Debian Med / dcmtk

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[med-svn] [Git][med-team/elastix][master] Correct doxygen patch

2018-12-30 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
0b116099 by Gert Wollny at 2018-12-30T18:08:00Z
Correct doxygen patch

- - - - -


1 changed file:

- debian/patches/doxygen_cleanup.patch


Changes:

=
debian/patches/doxygen_cleanup.patch
=
@@ -140,7 +140,7 @@ Cleanup of the doxygen documentation:
${ELASTIX_HELP_DIR}/MainPage.dox @ONLY )
 +
 +configure_file(
-+  ${ELASTIX_DOXYGEN_DIR}/doxygen.in
++  ${ELASTIX_DOXYGEN_DIR}/doxyfile.in
 +  ${ELASTIX_HELP_DIR}/doxyfile.out @ONLY )
endif()
  endif()



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https://salsa.debian.org/med-team/elastix/commit/0b116099f0395fe0df80875342d3a44a4c48f4f4

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[med-svn] [Git][med-team/elastix][master] Enable building docu

2018-12-30 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
2962c9f5 by Gert Wollny at 2018-12-30T17:39:12Z
Enable building docu

- - - - -


1 changed file:

- debian/rules


Changes:

=
debian/rules
=
@@ -25,6 +25,7 @@ DEB_CMAKE_EXTRA_FLAGS += \
-DCMAKE_BUILD_TYPE=RELEASE \
-DCMAKE_SKIP_RPATH=ON \
-DSOURCE_DATE_EPOCH=$SOURCE_DATE_EPOCH \
+-DBUILD_DOCUMENTATION=ON \
-DELASTIX_USE_MEVISDICOMTIFF:BOOL=OFF \
-DUSE_KNNGraphAlphaMutualInformationMetric:BOOL=ON
 



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[med-svn] [Git][med-team/elastix][master] d/p/doxygen: Fix the doxygen name

2018-12-30 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
aefc6f2f by Gert Wollny at 2018-12-30T14:46:16Z
d/p/doxygen: Fix the doxygen name

- - - - -


1 changed file:

- debian/patches/doxygen_cleanup.patch


Changes:

=
debian/patches/doxygen_cleanup.patch
=
@@ -98,7 +98,7 @@ Cleanup of the doxygen documentation:
  
  
 -
-+http://elastix.isi.uu.nl/index.php;>http://elastix.isi.uu.nl/images/elastixLogo.gif; alt="go home" 
height="40">
++http://elastix.isi.uu.nl/index.php;>http://elastix.isi.uu.nl/images/elastixLogo.gif; alt="go home" 
height="40">
  
 -  Home |
 +  http://elastix.isi.uu.nl/index.php;>Home |
@@ -141,7 +141,7 @@ Cleanup of the doxygen documentation:
 +
 +configure_file(
 +  ${ELASTIX_DOXYGEN_DIR}/doxygen.in
-+  ${ELASTIX_HELP_DIR}/doxygen.out @ONLY )
++  ${ELASTIX_HELP_DIR}/doxyfile.out @ONLY )
endif()
  endif()
  



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[med-svn] [Git][med-team/elastix][master] d/p/doxygen: Correct patch to create doxygen out file

2018-12-30 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
a489085e by Gert Wollny at 2018-12-30T10:19:27Z
d/p/doxygen: Correct patch to create doxygen out file

- - - - -


1 changed file:

- debian/patches/doxygen_cleanup.patch


Changes:

=
debian/patches/doxygen_cleanup.patch
=
@@ -19,9 +19,8 @@ Cleanup of the doxygen documentation:
  * replace some local dangling links by absolute links
to the elastix home page
 
-diff -ru elastix-upstream/dox/doxygen/doxyfile.in 
elastix-upstream.new/dox/doxygen/doxyfile.in
 elastix-upstream/dox/doxygen/doxyfile.in   2015-09-10 18:29:19.0 
+0200
-+++ elastix-upstream.new/dox/doxygen/doxyfile.in   2015-10-15 
15:45:33.097342878 +0200
+--- a/dox/doxygen/doxyfile.in
 b/dox/doxygen/doxyfile.in
 @@ -1189,7 +1189,7 @@
  # The default value is: YES.
  # This tag requires that the tag GENERATE_HTML is set to YES.
@@ -67,9 +66,8 @@ diff -ru elastix-upstream/dox/doxygen/doxyfile.in 
elastix-upstream.new/dox/doxyg
  
  # The DOT_PATH tag can be used to specify the path where the dot tool can be
  # found. If left blank, it is assumed the dot tool can be found in the path.
-diff -ru elastix-upstream/dox/doxygen/DoxygenFooter.html.in 
elastix-upstream.new/dox/doxygen/DoxygenFooter.html.in
 elastix-upstream/dox/doxygen/DoxygenFooter.html.in 2015-09-10 
18:29:19.0 +0200
-+++ elastix-upstream.new/dox/doxygen/DoxygenFooter.html.in 2015-10-13 
15:16:17.981269062 +0200
+--- a/dox/doxygen/DoxygenFooter.html.in
 b/dox/doxygen/DoxygenFooter.html.in
 @@ -7,21 +7,9 @@
  
  
@@ -93,9 +91,8 @@ diff -ru elastix-upstream/dox/doxygen/DoxygenFooter.html.in 
elastix-upstream.new
  
  
  
-diff -ru elastix-upstream/dox/doxygen/DoxygenHeader.html 
elastix-upstream.new/dox/doxygen/DoxygenHeader.html
 elastix-upstream/dox/doxygen/DoxygenHeader.html2015-09-10 
18:29:19.0 +0200
-+++ elastix-upstream.new/dox/doxygen/DoxygenHeader.html2015-10-13 
15:14:09.110547084 +0200
+--- a/dox/doxygen/DoxygenHeader.html
 b/dox/doxygen/DoxygenHeader.html
 @@ -24,9 +24,9 @@
  
  
@@ -126,3 +123,25 @@ diff -ru elastix-upstream/dox/doxygen/DoxygenHeader.html 
elastix-upstream.new/do
 -
 -
 -
+--- a/CMakeLists.txt
 b/CMakeLists.txt
+@@ -379,7 +379,7 @@
+ 
+ # Get date
+ if( UNIX OR CYGWIN )
+-  exec_program( "date '+%d-%m-%Y'" OUTPUT_VARIABLE ELASTIX_DOXYGEN_DATE )
++  set(ELASTIX_DOXYGEN_DATE  ${SOURCE_DATE_EPOCH})
+ endif()
+ if( WIN32 )
+   if( NOT CYGWIN AND NOT MINGW )
+@@ -398,6 +398,10 @@
+ configure_file(
+   ${ELASTIX_DOXYGEN_DIR}/MainPage.dox.in
+   ${ELASTIX_HELP_DIR}/MainPage.dox @ONLY )
++
++configure_file(
++  ${ELASTIX_DOXYGEN_DIR}/doxygen.in
++  ${ELASTIX_HELP_DIR}/doxygen.out @ONLY )
+   endif()
+ endif()
+ 



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[med-svn] [Git][med-team/elastix][master] d/p: Add a patch to not install includes, they are not packaged anyway

2018-12-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
a5d1eece by Gert Wollny at 2018-12-23T19:44:27Z
d/p: Add a patch to not install includes, they are not packaged anyway

- - - - -


2 changed files:

- + debian/patches/no_include_install.patch
- debian/patches/series


Changes:

=
debian/patches/no_include_install.patch
=
@@ -0,0 +1,24 @@
+--- a/Core/CMakeLists.txt
 b/Core/CMakeLists.txt
+@@ -231,21 +231,6 @@
+   RUNTIME DESTINATION ${ELASTIX_RUNTIME_DIR}
+   COMPONENT RuntimeLibraries )
+ 
+-# Install all header files.
+-install( DIRECTORY
+-  ${elastix_SOURCE_DIR}/Common
+-  ${elastix_SOURCE_DIR}/Core
+-  ${elastix_SOURCE_DIR}/Components
+-  DESTINATION ${ELASTIX_INCLUDE_DIR}
+-  FILES_MATCHING PATTERN "*.h" PATTERN "*.hxx" )
+-install( FILES
+-  ${elastix_BINARY_DIR}/elxInstallComponentFunctionCalls.h
+-  ${elastix_BINARY_DIR}/elxInstallComponentFunctionDeclarations.h
+-  ${elastix_BINARY_DIR}/elxSupportedImageTypes.h
+-  
${elastix_BINARY_DIR}/ITKFactoryRegistration/itkImageIOFactoryRegisterManager.h
+-  
${elastix_BINARY_DIR}/ITKFactoryRegistration/itkTransformIOFactoryRegisterManager.h
+-  DESTINATION ${ELASTIX_INCLUDE_DIR} )
+-
+ #-
+ # The Core/Install directory contains a CMakeLists file for
+ # defining the elastix compilation types.


=
debian/patches/series
=
@@ -1,2 +1,3 @@
 doxygen_cleanup.patch
 static_libann.patch
+no_include_install.patch



View it on GitLab: 
https://salsa.debian.org/med-team/elastix/commit/a5d1eecec43cf915331cc59a048ae6b539dede15

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[med-svn] [Git][med-team/elastix][master] 2 commits: Unapply patches

2018-12-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
bfbf7b2c by Gert Wollny at 2018-12-23T18:00:06Z
Unapply patches

- - - - -
4abcce59 by Gert Wollny at 2018-12-23T18:03:44Z
d/p: Re-add patch to make libANN static

- - - - -


5 changed files:

- debian/patches/series
- + debian/patches/static_libann.patch
- dox/doxygen/DoxygenFooter.html.in
- dox/doxygen/DoxygenHeader.html
- dox/doxygen/doxyfile.in


Changes:

=
debian/patches/series
=
@@ -1 +1,2 @@
 doxygen_cleanup.patch
+static_libann.patch


=
debian/patches/static_libann.patch
=
@@ -0,0 +1,22 @@
+--- 
a/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeLists.txt
 
b/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeLists.txt
+@@ -40,18 +40,4 @@
+ )
+ 
+ # Create the ANNlib library
+-add_library( ANNlib SHARED ${ANN_SRCS} )
+-
+-# Necessary when building a library, because in windows dll_export
+-# is needed for creating the dll, but dll_import for using it in a program.
+-set_target_properties( ANNlib PROPERTIES DEFINE_SYMBOL DLL_EXPORTS )
+-
+-# Group in IDE's like Visual Studio
+-set_property( TARGET ANNlib PROPERTY FOLDER "libraries" )
+-
+-# Install
+-install( TARGETS ANNlib
+-  ARCHIVE DESTINATION ${ELASTIX_ARCHIVE_DIR}
+-  LIBRARY DESTINATION ${ELASTIX_LIBRARY_DIR}
+-  RUNTIME DESTINATION ${ELASTIX_RUNTIME_DIR}
+-  COMPONENT RuntimeLibraries )
++add_library( ANNlib STATIC ${ANN_SRCS} )


=
dox/doxygen/DoxygenFooter.html.in
=
@@ -7,9 +7,21 @@
 
 
 Generated on @ELASTIX_DOXYGEN_DATE@ for elastix by http://www.doxygen.org/index.html;> @ELASTIX_DOXYGEN_VERSION@ 
-http://elastix.isi.uu.nl/index.php;>http://elastix.isi.uu.nl/images/elastixLogo.gif; alt="elastix logo" 
height="40">
+
 
 
+
+
+var gaJsHost = (("https:" == document.location.protocol) ? "<a  rel="nofollow" href="https://ssl.&quot">https://ssl.&quot</a>; : 
"<a  rel="nofollow" href="http://www.&quot">http://www.&quot</a>;);
+document.write(unescape("%3Cscript src='" + gaJsHost + 
"google-analytics.com/ga.js' type='text/javascript'%3E%3C/script%3E"));
+
+
+var pageTracker = _gat._getTracker("UA-5189069-1");
+pageTracker._initData();
+pageTracker._trackPageview();
+
+
+
 
 
 


=
dox/doxygen/DoxygenHeader.html
=
@@ -24,9 +24,9 @@ $extrastylesheet
 
 
 
-http://elastix.isi.uu.nl/index.php;>http://elastix.isi.uu.nl/images/elastixLogo.gif; alt="go home" 
height="40">
+
 
-  http://elastix.isi.uu.nl/index.php;>Home |
+  Home |
 MainPage |
 Modules |
 Namespace List |
@@ -40,3 +40,17 @@ $extrastylesheet
 RelatedPages
 
 
+
+  (function() {
+var cx = '014177235365818249935:2bt7h_7zxue';
+var gcse = document.createElement('script');
+gcse.type = 'text/javascript';
+gcse.async = true;
+gcse.src = (document.location.protocol == 'https:' ? 'https:' : 'http:') +
+'//www.google.com/cse/cse.js?cx=' + cx;
+var s = document.getElementsByTagName('script')[0];
+s.parentNode.insertBefore(gcse, s);
+  })();
+
+
+


=
dox/doxygen/doxyfile.in
=
@@ -1189,7 +1189,7 @@ HTML_COLORSTYLE_GAMMA  = 80
 # The default value is: YES.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_TIMESTAMP = NO
+HTML_TIMESTAMP = YES
 
 # If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML
 # documentation will contain sections that can be hidden and shown after the
@@ -1197,7 +1197,7 @@ HTML_TIMESTAMP = NO
 # The default value is: NO.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_DYNAMIC_SECTIONS  = YES
+HTML_DYNAMIC_SECTIONS  = NO
 
 # With HTML_INDEX_NUM_ENTRIES one can control the preferred number of entries
 # shown in the various tree structured indices initially; the user can expand
@@ -1540,7 +1540,7 @@ MATHJAX_CODEFILE   =
 # The default value is: YES.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-SEARCHENGINE   = YES
+SEARCHENGINE   = NO
 
 # When the SERVER_BASED_SEARCH tag is enabled the search engine will be
 # implemented using a web server instead of a web client using Javascript. 
There
@@ -2351,7 +2351,7 @@ DIRECTORY_GRAPH= YES
 # The default value is: png.
 # This tag requires that the tag HAVE_DOT is set to YES.
 
-DOT_IMAGE_FORMAT   = svg
+DOT_IMAGE_FORMAT   = png
 
 # If DOT_IMAGE_FORMAT is set to svg, then this option can be set to YES to
 # enable generation of interactive SVG images that allow zooming a

[med-svn] [Git][med-team/elastix][master] d/rules: Don't use non-standard build dir

2018-12-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
51c28ee2 by Gert Wollny at 2018-12-23T16:20:05Z
d/rules: Dont use non-standard build dir

- - - - -


1 changed file:

- debian/rules


Changes:

=
debian/rules
=
@@ -9,7 +9,7 @@ export DEB_LDFLAGS_MAINT_APPEND=-lniftiio
 EPOCH_DATE:=$(shell date -u -d ${SOURCE_DATE_EPOCH} +%d.%m.%Y)
 
 %:
-   dh $@ --builddir=BUILD
+   dh $@
 
 binary: binary-arch binary-indep
 
@@ -44,7 +44,7 @@ doc-stamp: help/html/index.html dox/manual/manual.pdf
touch $@
 
 override_dh_auto_test:
-LD_LIBRARY_PATH=`pwd`/BUILD/bin dh_auto_test
+LD_LIBRARY_PATH=`pwd`/obj-*/bin dh_auto_test
 
 # build-deps: doxygen, latex, dot
 help/html/index.html: help/doxyfile.out



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[med-svn] [Git][med-team/elastix][master] d/rules: Correct configure command

2018-12-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
2f6567bb by Gert Wollny at 2018-12-23T11:48:14Z
d/rules: Correct configure command

- - - - -


1 changed file:

- debian/rules


Changes:

=
debian/rules
=
@@ -9,7 +9,7 @@ export DEB_LDFLAGS_MAINT_APPEND=-lniftiio
 EPOCH_DATE:=$(shell date -u -d ${SOURCE_DATE_EPOCH} +%d.%m.%Y)
 
 %:
-   dh --builddir=BUILD $@
+   dh $@ --builddir=BUILD
 
 binary: binary-arch binary-indep
 



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[med-svn] [Git][med-team/elastix][master] 2 commits: d/control: Add libnifti-dev to build deps

2018-12-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
2d295e28 by Gert Wollny at 2018-12-23T11:41:24Z
d/control: Add libnifti-dev to build deps

- - - - -
78b6f1df by Gert Wollny at 2018-12-23T11:41:49Z
d/.gitlab-ci.yml: Update build script to print log tail at error

- - - - -


2 changed files:

- debian/.gitlab-ci.yml
- debian/control


Changes:

=
debian/.gitlab-ci.yml
=
@@ -11,5 +11,4 @@ build:
 - git checkout master 
 - git pull 
 # silence build to not exceed build log size of gitlab-ci
-- gbp buildpackage -uc -us 2>&1 >../build.log
-- tail -n 100 ../build.log
+- gbp buildpackage -uc -us 2>&1 >../build.log && exit 0 || tail -n 100 
../build.log  && exit -1


=
debian/control
=
@@ -11,6 +11,7 @@ Build-Depends: debhelper (>= 11~),
zlib1g-dev,
libpng-dev,
libtiff-dev,
+  libnifti-dev,
libfftw3-dev
 Build-Depends-Indep: doxygen,
  graphviz,



View it on GitLab: 
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[med-svn] [Git][med-team/elastix][master] 3 commits: d/rules: Add nifti lib to link flags

2018-12-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / elastix


Commits:
2274241e by Gert Wollny at 2018-12-23T10:53:34Z
d/rules: Add nifti lib to link flags

- - - - -
454aa4f5 by Gert Wollny at 2018-12-23T11:10:49Z
d/.gitlab-ci.yml: Add CI support

- - - - -
c4545893 by Gert Wollny at 2018-12-23T11:25:43Z
d/rules: Add rule for running tests and change build dir

- - - - -


2 changed files:

- + debian/.gitlab-ci.yml
- debian/rules


Changes:

=
debian/.gitlab-ci.yml
=
@@ -0,0 +1,15 @@
+image: debian:sid
+
+build:
+  stage: build
+  before_script:
+- apt-get update && apt-get -y install devscripts git-buildpackage 
+- mk-build-deps --tool "apt -y -o Debug::pkgProblemResolver=yes 
--no-install-recommends" --install -r debian/control 
+  script:
+- git checkout pristine-tar 
+- git pull 
+- git checkout master 
+- git pull 
+# silence build to not exceed build log size of gitlab-ci
+- gbp buildpackage -uc -us 2>&1 >../build.log
+- tail -n 100 ../build.log


=
debian/rules
=
@@ -4,10 +4,12 @@ export DEB_BUILD_MAINT_OPTIONS = hardening=+all
 export DEB_LDFLAGS_MAINT_APPEND = -Wl,--as-needed
 export DEB_CXXFLAGS_MAINT_APPEND  = -fvisibility=hidden
 
+export DEB_LDFLAGS_MAINT_APPEND=-lniftiio
+
 EPOCH_DATE:=$(shell date -u -d ${SOURCE_DATE_EPOCH} +%d.%m.%Y)
 
 %:
-   dh $@
+   dh --builddir=BUILD $@
 
 binary: binary-arch binary-indep
 
@@ -41,6 +43,9 @@ doc: doc-stamp
 doc-stamp: help/html/index.html dox/manual/manual.pdf
touch $@
 
+override_dh_auto_test:
+LD_LIBRARY_PATH=`pwd`/BUILD/bin dh_auto_test
+
 # build-deps: doxygen, latex, dot
 help/html/index.html: help/doxyfile.out
doxygen $<



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[med-svn] [Git][med-team/insighttoolkit][master] Update changelog for upload

2018-12-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / insighttoolkit


Commits:
76cc3483 by Gert Wollny at 2018-12-23T10:24:04Z
Update changelog for upload

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,3 +1,13 @@
+insighttoolkit4 (4.13.1-dfsg1-1~exp2) experimental; urgency=medium
+
+  * d/control.in: Update VCS urls
+  * d/control: Update files
+  * d/control: remove dep on dh-python, it is part of python2
+  * d/p/fix_dyn..: Add patch to fix compilation error
+  * d/p: remove gcc version patch, the checks are now done upstream
+
+ -- Gert Wollny   Sun, 23 Dec 2018 11:22:58 +0100
+
 insighttoolkit4 (4.13.1-dfsg1-1~exp1) experimental; urgency=medium
 
   * Add patches to fix build failures



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[med-svn] [Git][med-team/insighttoolkit] Pushed new tag debian/4.13.1-dfsg1-1_exp2

2018-12-23 Thread Gert Wollny
Gert Wollny pushed new tag debian/4.13.1-dfsg1-1_exp2 at Debian Med / 
insighttoolkit

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[med-svn] [Git][med-team/dcmtk] Pushed new tag debian/3.6.4-1_exp1

2018-12-23 Thread Gert Wollny
Gert Wollny pushed new tag debian/3.6.4-1_exp1 at Debian Med / dcmtk

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[med-svn] [Git][med-team/dcmtk][master] 2 commits: d/copyright: Add new libcmr files with non-OFFICE copyright

2018-12-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / dcmtk


Commits:
6f0ce5fd by Gert Wollny at 2018-12-23T09:43:21Z
d/copyright: Add new libcmr files with non-OFFICE copyright

- - - - -
ad430412 by Gert Wollny at 2018-12-23T09:44:19Z
Update changelog for upload to experimental

- - - - -


2 changed files:

- debian/changelog
- debian/copyright


Changes:

=
debian/changelog
=
@@ -1,4 +1,4 @@
-dcmtk (3.6.4-1~exp1) UNRELEASED; urgency=medium
+dcmtk (3.6.4-1~exp1) experimental; urgency=medium
 
   [ Jelmer Vernooij ]
   * Move source package lintian overrides to debian/source.
@@ -10,8 +10,9 @@ dcmtk (3.6.4-1~exp1) UNRELEASED; urgency=medium
   * d/control: Update lib package name 
   * d/rules: Change dict install directory to new lib name 
   * d/dcmtk.postinst: Disable running chown recursively
+  * d/copyright: Add new libcmr files with non-OFFICE copyright
 
- -- Gert Wollny   Sat, 22 Dec 2018 01:38:38 +0100
+ -- Gert Wollny   Sun, 23 Dec 2018 10:43:41 +0100
 
 dcmtk (3.6.3-1~exp1) experimental; urgency=medium
 


=
debian/copyright
=
@@ -400,6 +400,7 @@ Files: dcmsr/include/dcmtk/dcmsr/dsrdncsr.h
  dcmsr/include/dcmtk/dcmsr/dsrsaecc.h
  dcmsr/libsrc/dsrdncsr.cc
  dcmsr/libsrc/dsrsaecc.cc
+ dcmsr/include/dcmtk/dcmsr/cmr/tid1409m.h
  dcmsr/include/dcmtk/dcmsr/cmr/tid1419m.h
  dcmsr/include/dcmtk/dcmsr/cmr/tid1501.h
  dcmsr/include/dcmtk/dcmsr/cmr/tid15def.h
@@ -408,6 +409,7 @@ Files: dcmsr/include/dcmtk/dcmsr/dsrdncsr.h
  dcmsr/include/dcmtk/dcmsr/cmr/dsritcsr.h
  dcmsr/include/dcmtk/dcmsr/cmr/dsritcsr.h
  dcmsr/include/dcmtk/dcmsr/cmr/dsrprdcc.h
+ dcmsr/libcmr/tid1409m.cc
  dcmsr/libcmr/tid1419m.cc
  dcmsr/libcmr/tid1501.cc
  dcmsr/libcmr/tid15def.cc



View it on GitLab: 
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[med-svn] [Git][med-team/insighttoolkit][master] 3 commits: d/control: remove dep on dh-python, it is part of python2

2018-12-23 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / insighttoolkit


Commits:
d961874a by Gert Wollny at 2018-12-23T08:45:15Z
d/control: remove dep on dh-python, it is part of python2

- - - - -
5fd81ce7 by Gert Wollny at 2018-12-23T08:45:21Z
d/p/fix_dyn..: Add patch to fix compilation error

- - - - -
e58c0c14 by Gert Wollny at 2018-12-23T08:45:21Z
d/p: remove gcc version patch, the checks are now done upstream

Also this patch seems to make some test fail

- - - - -


3 changed files:

- debian/control
- + debian/patches/fix_dynamic_cast.patch
- debian/patches/series


Changes:

=
debian/control
=
@@ -22,8 +22,7 @@ Build-Depends: debhelper (>= 9),
 libminc-dev, 
 libnifti-dev, 
 libhdf5-dev, 
-dh_python,
-python-all-dev
+python-dev
 #  libvtk6-dev -- only needed if we enable one of the following modules:
 # VtkGlue, LevelSetsv4Visualization
 Standards-Version: 4.1.3


=
debian/patches/fix_dynamic_cast.patch
=
@@ -0,0 +1,13 @@
+Author: Gert Wollny 
+Description: Fix an (old) upstream error for a type cast
+--- 
a/Modules/Registration/PDEDeformable/include/itkMultiResolutionPDEDeformableRegistration.h
 
b/Modules/Registration/PDEDeformable/include/itkMultiResolutionPDEDeformableRegistration.h
+@@ -185,7 +185,7 @@
+   /** Get output deformation field. */
+   const DeformationFieldType * GetDeformationField(void)
+   {
+-return itkDynamicCastInDebugMode 
(this->GetDisplacementField());
++return itkDynamicCastInDebugMode 
(this->GetDisplacementField());
+   }
+ #endif
+ 


=
debian/patches/series
=
@@ -8,5 +8,6 @@ itk4.12.0-resource_cprobe.patch
 disable-doxygen.patch
 simplify-system-gtest.patch
 fix-minc-includes.patch
-remove_gcc_version_test.patch
+#remove_gcc_version_test.patch
 #fix_python_tests.diff
+fix_dynamic_cast.patch



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[med-svn] [Git][med-team/dcmtk][upstream] New upstream version 3.6.4

2018-12-02 Thread Gert Wollny
Gert Wollny pushed to branch upstream at Debian Med / dcmtk


Commits:
0822681b by Gert Wollny at 2018-12-01T18:53:46Z
New upstream version 3.6.4
- - - - -


18 changed files:

- ANNOUNCE
- CMake/3rdparty.cmake
- CMake/CTest/CTestCustomAndroid.cmake.in
- CMake/CTest/CTestCustomWine.cmake.in
- CMake/CTest/dcmtkCTestMacros.cmake
- CMake/CTest/dcmtkCTestRun.cmake.in
- CMake/CTest/dcmtkCTestRunAndroid.cmake.in
- CMake/CTest/dcmtkCTestRunExhaustive.cmake
- CMake/CTest/dcmtkCTestRunWine.cmake.in
- CMake/CheckCMakeCommandExists.cmake
- CMake/CheckFunctionWithHeaderExists.cmake
- CMake/DCMTKConfig.cmake.in
- CMake/FindCharset.cmake
- CMake/FindICU.cmake
- CMake/FindICONV.cmake → CMake/FindIconv.cmake
- CMake/FindSndfile.cmake
- CMake/FindWrap.cmake
- CMake/GenerateCMakeExports.cmake


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/dcmtk/commit/0822681b683310b7722c2e26511284fe67dfc641

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[med-svn] [Git][med-team/dcmtk][pristine-tar] pristine-tar data for dcmtk_3.6.4.orig.tar.gz

2018-12-02 Thread Gert Wollny
Gert Wollny pushed to branch pristine-tar at Debian Med / dcmtk


Commits:
594292cc by Gert Wollny at 2018-12-01T18:54:12Z
pristine-tar data for dcmtk_3.6.4.orig.tar.gz

- - - - -


2 changed files:

- + dcmtk_3.6.4.orig.tar.gz.delta
- + dcmtk_3.6.4.orig.tar.gz.id


Changes:

=
dcmtk_3.6.4.orig.tar.gz.delta
=
Binary files /dev/null and b/dcmtk_3.6.4.orig.tar.gz.delta differ


=
dcmtk_3.6.4.orig.tar.gz.id
=
@@ -0,0 +1 @@
+f0ba2ded71a7ad94cabf4609dc9f0363bb026ff0



View it on GitLab: 
https://salsa.debian.org/med-team/dcmtk/commit/594292cc13d9e36d13a2f2e96c03eb620cf21d41

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[med-svn] [Git][med-team/dcmtk] Pushed new tag upstream/3.6.4

2018-12-02 Thread Gert Wollny
Gert Wollny pushed new tag upstream/3.6.4 at Debian Med / dcmtk

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[med-svn] [Git][med-team/dcmtk][master] 5 commits: New upstream version 3.6.4

2018-12-02 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / dcmtk


Commits:
0822681b by Gert Wollny at 2018-12-01T18:53:46Z
New upstream version 3.6.4
- - - - -
08612dd2 by Gert Wollny at 2018-12-01T18:54:12Z
Update upstream source from tag upstream/3.6.4

Update to upstream version 3.6.4
with Debian dir ddd7356720e988affbbb080b064f304edb2e2a1b
- - - - -
63f481aa by Gert Wollny at 2018-12-02T09:05:49Z
d/p: Update patches 0-7 for new release

- - - - -
b01ad826 by Gert Wollny at 2018-12-02T09:18:32Z
d/p: Update remaining patches

- - - - -
becd732d by Gert Wollny at 2018-12-02T09:22:08Z
Update changelog

- - - - -


18 changed files:

- ANNOUNCE
- CMake/3rdparty.cmake
- CMake/CTest/CTestCustomAndroid.cmake.in
- CMake/CTest/CTestCustomWine.cmake.in
- CMake/CTest/dcmtkCTestMacros.cmake
- CMake/CTest/dcmtkCTestRun.cmake.in
- CMake/CTest/dcmtkCTestRunAndroid.cmake.in
- CMake/CTest/dcmtkCTestRunExhaustive.cmake
- CMake/CTest/dcmtkCTestRunWine.cmake.in
- CMake/CheckCMakeCommandExists.cmake
- CMake/CheckFunctionWithHeaderExists.cmake
- CMake/DCMTKConfig.cmake.in
- CMake/FindCharset.cmake
- CMake/FindICU.cmake
- CMake/FindICONV.cmake → CMake/FindIconv.cmake
- CMake/FindSndfile.cmake
- CMake/FindWrap.cmake
- CMake/GenerateCMakeExports.cmake


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/dcmtk/compare/31e7260616921f5504f172f976f73474d31e2d1d...becd732d871cb4ddae5e6b83c6ce3e1669f1e84a

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[med-svn] [Git][med-team/castxml][master] 3 commits: d/rules: Add -latomic to libs on armel, clang requires it

2018-12-02 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / castxml


Commits:
0dbc4c33 by Gert Wollny at 2018-12-01T18:19:34Z
d/rules: Add -latomic to libs on armel, clang requires it

- - - - -
fe5ee393 by Gert Wollny at 2018-12-01T18:20:03Z
Update changelog

- - - - -
65d31524 by Gert Wollny at 2018-12-01T18:26:28Z
Update for release

- - - - -


2 changed files:

- debian/changelog
- debian/rules


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+castxml (0.1+git20180702-3) unstable; urgency=medium
+
+  * d/rules: Add -latomic to libs on armel, clang requires it
+
+ -- Gert Wollny   Sat, 01 Dec 2018 19:26:16 +0100
+
 castxml (0.1+git20180702-2) unstable; urgency=medium
 
   * Update changelog for upload [ci skip]


=
debian/rules
=
@@ -2,6 +2,12 @@
 
 export DEB_BUILD_MAINT_OPTIONS = hardening=+all
 
+# clang pulls in atomics that require an extra library on armel 
+ifeq ($(DEB_HOST_ARCH),armel)
+export DEB_LDFLAGS_MAINT_APPEND=-latomic
+endif 
+
+
 CMAKE_FLAGS = -DCastXML_INSTALL_DOC_DIR:STRING=/usr/share/doc/castxml \
   -DLLVM_DIR=/usr/lib/llvm-4.0/cmake
 



View it on GitLab: 
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View it on GitLab: 
https://salsa.debian.org/med-team/castxml/compare/96a4587f7544fd72b7cd7f00f993600feced1853...65d31524b500eea7d16409d4ff9d556963f38766
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[med-svn] [Git][med-team/castxml] Pushed new tag debian/0.1+git20180702-3

2018-12-02 Thread Gert Wollny
Gert Wollny pushed new tag debian/0.1+git20180702-3 at Debian Med / castxml

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[med-svn] [Git][med-team/castxml] Pushed new tag debian/0.1+git20180702-2

2018-12-01 Thread Gert Wollny
Gert Wollny pushed new tag debian/0.1+git20180702-2 at Debian Med / castxml

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[med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.8-2

2018-11-25 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.8.8-2 at Debian Med / gdcm

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[med-svn] [Git][med-team/gdcm] Pushed new tag upstream/2.8.8

2018-11-25 Thread Gert Wollny
Gert Wollny pushed new tag upstream/2.8.8 at Debian Med / gdcm

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[med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.8-1

2018-11-25 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.8.8-1 at Debian Med / gdcm

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[med-svn] [Git][med-team/vtk-dicom] Pushed new tag debian/0.8.7-2

2018-11-10 Thread Gert Wollny
Gert Wollny pushed new tag debian/0.8.7-2 at Debian Med / vtk-dicom

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[med-svn] [Git][med-team/vtk-dicom][master] 3 commits: d/control: Add break/replace lib package, Closes: #901214

2018-11-10 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / vtk-dicom


Commits:
0bdaa3eb by Gert Wollny at 2018-11-10T12:23:53Z
d/control: Add break/replace lib package, Closes: #901214

- - - - -
09481fdd by Gert Wollny at 2018-11-10T12:57:13Z
Update changelog for release

- - - - -
6f425cb3 by Gert Wollny at 2018-11-10T13:25:04Z
check differently

- - - - -


2 changed files:

- debian/changelog
- debian/control


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+vtk-dicom (0.8.7-2) unstable; urgency=medium
+
+  * d/control: Add break/replace lib package, Closes: #901214
+
+ -- Gert Wollny   Sat, 10 Nov 2018 13:56:45 +0100
+
 vtk-dicom (0.8.7-1) unstable; urgency=medium
 
   * d/*.install: move cmake files into -dev package, Closes: #901214


=
debian/control
=
@@ -26,8 +26,8 @@ Architecture: any
 Multi-Arch: same
 Pre-Depends: ${misc:Pre-Depends}
 Depends: libvtkdicom0.8 (= ${binary:Version}), ${misc:Depends}
-Replaces: libvtk-dicom0.7-dev
-Conflicts: libvtk-dicom0.7-dev
+Replaces: libvtk-dicom0.7-dev, libvtkdicom0.7
+Breaks: libvtk-dicom0.7-dev, libvtkdicom0.7 
 Description: DICOM for VTK - dev
  This package contains a set of classes for managing DICOM
  files and metadata from within VTK, and some utility programs



View it on GitLab: 
https://salsa.debian.org/med-team/vtk-dicom/compare/5c66916bea9b3e28c900025fa8e2b0c3d4106fdd...6f425cb3beaac850b02072bd408ba44163f5e6d5

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https://salsa.debian.org/med-team/vtk-dicom/compare/5c66916bea9b3e28c900025fa8e2b0c3d4106fdd...6f425cb3beaac850b02072bd408ba44163f5e6d5
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[med-svn] [Git][med-team/vtk-dicom] Pushed new tag debian/0.8.7-1

2018-10-30 Thread Gert Wollny
Gert Wollny pushed new tag debian/0.8.7-1 at Debian Med / vtk-dicom

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[med-svn] [Git][med-team/vtk-dicom][master] Upload to unstable

2018-10-30 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / vtk-dicom


Commits:
5c66916b by Gert Wollny at 2018-10-30T15:50:59Z
Upload to unstable

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,9 +1,10 @@
-vtk-dicom (0.8.7-1~exp2) experimental; urgency=medium
+vtk-dicom (0.8.7-1) unstable; urgency=medium
 
   * d/*.install: move cmake files into -dev package, Closes: #901214
   * d/control: Update standards to 4.2.1, no changes
   * d/p: SQL lib patches
   * d/source/control: remove custom compression options
+  * Upload to unstable
 
  -- Gert Wollny   Tue, 30 Oct 2018 16:46:09 +0100
 



View it on GitLab: 
https://salsa.debian.org/med-team/vtk-dicom/commit/5c66916bea9b3e28c900025fa8e2b0c3d4106fdd

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[med-svn] [Git][med-team/vtk-dicom][master] 6 commits: d/*.install: move cmake files into -dev package, Closes: #901214

2018-10-30 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / vtk-dicom


Commits:
9ae5b2c2 by Gert Wollny at 2018-10-30T14:26:50Z
d/*.install: move cmake files into -dev package, Closes: #901214

- - - - -
a6c61ad7 by Gert Wollny at 2018-10-30T14:29:33Z
d/control: Update standards to 4.2.1, no changes

- - - - -
656b04c3 by Gert Wollny at 2018-10-30T14:29:56Z
Update changelog

- - - - -
586efae9 by Gert Wollny at 2018-10-30T15:39:17Z
disable SQL lib patches

- - - - -
7b799abd by Gert Wollny at 2018-10-30T15:46:00Z
remove custom compression options

- - - - -
566b8600 by Gert Wollny at 2018-10-30T15:46:41Z
Prep for upload

- - - - -


7 changed files:

- debian/changelog
- debian/control
- debian/libvtk-dicom-dev.install
- debian/libvtkdicom0.8.install
- − debian/patches/02_add_MySQL_and_PostgreSQL_to_VTK_LIBS.patch
- debian/patches/series
- − debian/source/options


Changes:

=
debian/changelog
=
@@ -1,3 +1,12 @@
+vtk-dicom (0.8.7-1~exp2) experimental; urgency=medium
+
+  * d/*.install: move cmake files into -dev package, Closes: #901214
+  * d/control: Update standards to 4.2.1, no changes
+  * d/p: SQL lib patches
+  * d/source/control: remove custom compression options
+
+ -- Gert Wollny   Tue, 30 Oct 2018 16:46:09 +0100
+
 vtk-dicom (0.8.7-1~exp1) experimental; urgency=medium
 
   [ Mathieu Malaterre ]


=
debian/control
=
@@ -17,7 +17,7 @@ Build-Depends: cmake,
 Homepage: http://github.com/dgobbi/vtk-dicom/
 Vcs-Browser: https://salsa.debian.org/med-team/vtk-dicom.git
 Vcs-Git:  https://salsa.debian.org/med-team/vtk-dicom.git
-Standards-Version: 4.1.4
+Standards-Version: 4.2.1
 X-Python3-Version: >= 3.6
 
 Package: libvtk-dicom-dev


=
debian/libvtk-dicom-dev.install
=
@@ -1,4 +1,5 @@
 usr/include/*
 usr/lib/*/libvtkDICOM.so 
+usr/lib/*/cmake/*
 
 


=
debian/libvtkdicom0.8.install
=
@@ -1,2 +1 @@
 usr/lib/*/libvtkDICOM.so.*
-usr/lib/*/cmake/*


=
debian/patches/02_add_MySQL_and_PostgreSQL_to_VTK_LIBS.patch deleted
=
@@ -1,13 +0,0 @@
-Description: Separate libs for different SQL servers
-
 a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -265,7 +265,7 @@
-   # The library dependencies
-   if("${VTK_MAJOR_VERSION}" GREATER 5)
- set(VTK_LIBS vtkCommonCore vtkCommonDataModel vtkImagingCore vtkIOCore
--vtkIOImage)
-+vtkIOImage vtkIOMySQL vtkIOPostgreSQL)
- # If vtkIOMPIImage is present, it has factories for vtkIOImage
- list(FIND VTK_LIBRARIES vtkIOMPIImage TMP_INDEX)
- if(TMP_INDEX GREATER -1)


=
debian/patches/series
=
@@ -1,3 +1,2 @@
 01_reproducable_build_datetime.patch
-02_add_MySQL_and_PostgreSQL_to_VTK_LIBS.patch
 03_test_python3.patch


=
debian/source/options deleted
=
@@ -1,2 +0,0 @@
-compression = xz
-compression-level = 9



View it on GitLab: 
https://salsa.debian.org/med-team/vtk-dicom/compare/43cef9e56c3172dca944a7496b6845f60bb8b9ff...566b86009d303dab67b998faad86d691f3494a67

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[med-svn] [Git][med-team/gdcm][master] 8 commits: New upstream version 2.8.8

2018-10-28 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
e23ddd9e by Gert Wollny at 2018-10-28T17:03:34Z
New upstream version 2.8.8
- - - - -
85c3c218 by Gert Wollny at 2018-10-28T17:03:34Z
d/p: remove fix-vtkjava-build-dir.patch (applied upstream)

- - - - -
0b83d819 by Gert Wollny at 2018-10-28T17:04:43Z
prep new release

- - - - -
52e00d01 by Gert Wollny at 2018-10-28T17:04:43Z
d/p: update patches

- - - - -
44ce132a by Gert Wollny at 2018-10-28T17:04:43Z
d/gdcm-doc.doc-base: update version number

- - - - -
ca73ca45 by Gert Wollny at 2018-10-28T17:04:43Z
Prep for upload

- - - - -
f8c72cb1 by Gert Wollny at 2018-10-28T17:07:33Z
remove d/p/5083513138.. - applies upstream

- - - - -
2ea30871 by Gert Wollny at 2018-10-28T17:08:15Z
Correct package

- - - - -


30 changed files:

- Applications/Cxx/gdcmimg.cxx
- Applications/Cxx/gdcminfo.cxx
- Applications/Cxx/gdcmpdf.cxx
- CMake/InstallMacros.cmake
- CMakeLists.txt
- Examples/Cxx/CMakeLists.txt
- + Examples/Cxx/PrintLUT.cxx
- Source/Common/gdcmCAPICryptographicMessageSyntax.cxx
- Source/Common/gdcmDirectory.cxx
- Source/DataDictionary/gdcmPrivateDefaultDicts.cxx
- Source/DataDictionary/gdcmSOPClassUIDToIOD.cxx
- Source/DataDictionary/gdcmUIDs.h
- Source/DataStructureAndEncodingDefinition/gdcmSequenceOfItems.cxx
- Source/DataStructureAndEncodingDefinition/gdcmWriter.cxx
- Source/MediaStorageAndFileFormat/gdcmBitmap.cxx
- Source/MediaStorageAndFileFormat/gdcmDirectoryHelper.cxx
- Source/MediaStorageAndFileFormat/gdcmImageChangeTransferSyntax.cxx
- Source/MediaStorageAndFileFormat/gdcmImageHelper.cxx
- Source/MediaStorageAndFileFormat/gdcmJPEGLSCodec.cxx
- Source/MediaStorageAndFileFormat/gdcmLookupTable.cxx
- Source/MediaStorageAndFileFormat/gdcmLookupTable.h
- Source/MediaStorageAndFileFormat/gdcmPrinter.cxx
- Source/MediaStorageAndFileFormat/gdcmRLECodec.cxx
- Testing/Source/DataDictionary/Cxx/TestSOPClassUIDToIOD.cxx
- 
Testing/Source/MediaStorageAndFileFormat/Cxx/TestImageChangePlanarConfiguration.cxx
- Testing/Source/MediaStorageAndFileFormat/Cxx/TestPrinter1.cxx
- Utilities/VTK/CMakeLists.txt
- Wrapping/Python/gdcmswig.i
- debian/changelog
- debian/gdcm-doc.doc-base


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/compare/313097c9cf0f45a65093fddd21103d2b290ced67...2ea30871ea8eccb19f149c49442d3fb17c04ce7c

-- 
View it on GitLab: 
https://salsa.debian.org/med-team/gdcm/compare/313097c9cf0f45a65093fddd21103d2b290ced67...2ea30871ea8eccb19f149c49442d3fb17c04ce7c
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[med-svn] [Git][med-team/gdcm][pristine-tar] pristine-tar data for gdcm_2.8.8.orig.tar.bz2

2018-10-28 Thread Gert Wollny
Gert Wollny pushed to branch pristine-tar at Debian Med / gdcm


Commits:
6bba4a41 by Gert Wollny at 2018-10-28T07:45:18Z
pristine-tar data for gdcm_2.8.8.orig.tar.bz2

- - - - -


2 changed files:

- + gdcm_2.8.8.orig.tar.bz2.delta
- + gdcm_2.8.8.orig.tar.bz2.id


Changes:

=
gdcm_2.8.8.orig.tar.bz2.delta
=
Binary files /dev/null and b/gdcm_2.8.8.orig.tar.bz2.delta differ


=
gdcm_2.8.8.orig.tar.bz2.id
=
@@ -0,0 +1 @@
+0633e7d69083491939e8ba1c679b3c6b4a1fea2b



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[med-svn] [Git][med-team/dicom3tools] Pushed new tag upstream/1.00_20180803063840

2018-10-28 Thread Gert Wollny
Gert Wollny pushed new tag upstream/1.00_20180803063840 at Debian Med / 
dicom3tools

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[med-svn] [Git][med-team/dicom3tools] Pushed new tag debian/1.00_20180803063840-1

2018-10-28 Thread Gert Wollny
Gert Wollny pushed new tag debian/1.00_20180803063840-1 at Debian Med / 
dicom3tools

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[med-svn] [Git][med-team/dicom3tools][master] Prep for upload

2018-10-28 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / dicom3tools


Commits:
fa49c5d6 by Gert Wollny at 2018-10-28T17:00:12Z
Prep for upload

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,4 +1,4 @@
-dicom3tools (1.00~20180803063840-1) UNRELEASED; urgency=medium
+dicom3tools (1.00~20180803063840-1) unstable; urgency=medium
 
   [Gert Wollny] 
   * New upstream version 1.00~20180803063840
@@ -6,8 +6,9 @@ dicom3tools (1.00~20180803063840-1) UNRELEASED; urgency=medium
 
   [Jelmer Vernooij]
   * Trim trailing whitespace.
+  * Move CI file into the correct place
 
- -- Gert Wollny   Sun, 28 Oct 2018 09:30:09 +0100
+ -- Gert Wollny   Sun, 28 Oct 2018 17:59:53 +0100
 
 dicom3tools (1.00~20180401144051-1) unstable; urgency=medium
 



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[med-svn] [Git][med-team/dicom3tools][pristine-tar] pristine-tar data for dicom3tools_1.00~20180803063840.orig.tar.bz2

2018-10-28 Thread Gert Wollny
Gert Wollny pushed to branch pristine-tar at Debian Med / dicom3tools


Commits:
34ef8517 by Gert Wollny at 2018-10-28T08:27:39Z
pristine-tar data for dicom3tools_1.00~20180803063840.orig.tar.bz2

- - - - -


2 changed files:

- + dicom3tools_1.00~20180803063840.orig.tar.bz2.delta
- + dicom3tools_1.00~20180803063840.orig.tar.bz2.id


Changes:

=
dicom3tools_1.00~20180803063840.orig.tar.bz2.delta
=
Binary files /dev/null and b/dicom3tools_1.00~20180803063840.orig.tar.bz2.delta 
differ


=
dicom3tools_1.00~20180803063840.orig.tar.bz2.id
=
@@ -0,0 +1 @@
+557dd25b02c7d45be097c88c5e71fae91d919a57



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[med-svn] [Git][med-team/dicom3tools][master] Move CI file into the correct place

2018-10-28 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / dicom3tools


Commits:
231ea81e by Gert Wollny at 2018-10-28T09:27:00Z
Move CI file into the correct place

- - - - -


1 changed file:

- .gitlab-ci.yml → debian/.gitlab-ci.yml


Changes:

=
.gitlab-ci.yml → debian/.gitlab-ci.yml
=



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[med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.7-3

2018-10-02 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.8.7-3 at Debian Med / gdcm

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[med-svn] [Git][med-team/gdcm][master] 2 commits: d/control: Add conflict with python2 packages, Closes: #908472

2018-10-01 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
21ebea90 by Gert Wollny at 2018-10-01T18:45:57Z
d/control: Add conflict with python2 packages, Closes: #908472

- - - - -
6db9b97e by Gert Wollny at 2018-10-01T18:49:16Z
Update changelog for release

- - - - -


2 changed files:

- debian/changelog
- debian/control


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+gdcm (2.8.7-3) unstable; urgency=medium
+
+  * d/control: Add conflict with python2 packages, Closes: #908472
+
+ -- Gert Wollny   Mon, 01 Oct 2018 20:48:07 +0200
+
 gdcm (2.8.7-2) unstable; urgency=medium
 
   [ Andreas Tille ]


=
debian/control
=
@@ -104,6 +104,7 @@ Section: python
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}, ${python3:Depends}, libgdcm2.8 (= 
${binary:Version})
 Provides: ${python:Provides}
+Conflicts: python-gdcm
 Description: Grassroots DICOM Python bindings
  Grassroots DiCoM is a C++ library for DICOM medical files. It is
  automatically wrapped to python/C#/Java (using swig). It supports
@@ -155,6 +156,7 @@ Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}, ${python3:Depends}, libvtkgdcm2.8 
(= ${binary:Version})
 Provides: ${python:Provides}
 Suggests: python3-gdcm
+Conflicts: python-vtkgdcm
 Description: Grassroots DICOM VTK/Python bindings
  Grassroots DiCoM is a C++ library for DICOM medical files. It is
  automatically wrapped to python/C#/Java (using swig). It supports



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[med-svn] [Git][med-team/miaviewit] Pushed new tag debian/1.0.5-2

2018-09-09 Thread Gert Wollny
Gert Wollny pushed new tag debian/1.0.5-2 at Debian Med / miaviewit

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[med-svn] [Git][med-team/mialmpick] Pushed new tag debian/0.2.14-2

2018-09-09 Thread Gert Wollny
Gert Wollny pushed new tag debian/0.2.14-2 at Debian Med / mialmpick

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[med-svn] [Git][med-team/mia] Pushed new tag debian/2.4.6-3

2018-09-09 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.4.6-3 at Debian Med / mia

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[med-svn] [Git][med-team/mia][master] Update changelog [ci skip]

2018-09-09 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / mia


Commits:
04c794fb by Gert Wollny at 2018-09-09T19:14:53Z
Update changelog [ci skip]

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,4 +1,4 @@
-mia (2.4.6-3) UNRELEASED; urgency=medium
+mia (2.4.6-3) unstable; urgency=medium
 
   [ Andreas Tille ]
   * Remove invalid fields from debian/upstream/metadata



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[med-svn] [Git][med-team/miaviewit][master] 2 commits: d/* cme fix dpkg - update standards to 4.2.1 - fix VCS urls - fix copyright format

2018-09-09 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / miaviewit


Commits:
bd85278b by Gert Wollny at 2018-09-09T19:23:46Z
d/* cme fix dpkg  - update standards to 4.2.1  - fix VCS urls - fix copyright 
format

- - - - -
4c67b5d6 by Gert Wollny at 2018-09-09T19:24:24Z
Update changelog for new upload

- - - - -


3 changed files:

- debian/changelog
- debian/control
- debian/copyright


Changes:

=
debian/changelog
=
@@ -1,3 +1,12 @@
+miaviewit (1.0.5-2) unstable; urgency=medium
+
+  * d/* cme fix dpkg  
+- update standards to 4.2.1  (no changes needed) 
+- fix VCS urls 
+- fix copyright format
+
+ -- Gert Wollny   Sun, 09 Sep 2018 21:23:51 +0200
+
 miaviewit (1.0.5-1) unstable; urgency=medium
 
   * New upstream version 1.0.5, Closes: #865575


=
debian/control
=
@@ -12,9 +12,9 @@ Build-Depends: debhelper (>= 9.0.0),
libgtkmm-2.4-dev,
libxml++2.6-dev,
libvistaio-dev
-Standards-Version: 4.0.0
-Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/miaviewit.git
-Vcs-Git: https://anonscm.debian.org/git/debian-med/miaviewit.git
+Standards-Version: 4.2.1
+Vcs-Browser: https://salsa.debian.org/med-team/miaviewit
+Vcs-Git: https://salsa.debian.org/med-team/miaviewit.git
 Homepage: http://mia.sourceforge.net
 
 Package: libmiaviewit0


=
debian/copyright
=
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: miaviewit
 Source: http://mia.sourceforge.net
 
@@ -10,7 +10,7 @@ Files: debian/*
 Copyright: Gert Wollny 
 License: GPL-3.0+
 
-Files: viewit/trackball.* 
+Files: viewit/trackball.*
 Copyright: 1993, 1994, Silicon Graphics, Inc.
 License: other
  ALL RIGHTS RESERVED
@@ -63,4 +63,3 @@ License: GPL-3.0+
  .
  On Debian systems, the complete text of the GNU General
  Public License version 3 can be found in "/usr/share/common-licenses/GPL-3".
-



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[med-svn] [Git][med-team/mia][master] 2 commits: d/* update standards to 4.2.1 (no changes needed)

2018-09-09 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / mia


Commits:
e0faf3b2 by Gert Wollny at 2018-09-09T17:51:04Z
d/* update standards to 4.2.1 (no changes needed)

- - - - -
7d4a4cf9 by Gert Wollny at 2018-09-09T17:51:47Z
Update changelog

- - - - -


2 changed files:

- debian/changelog
- debian/control


Changes:

=
debian/changelog
=
@@ -1,3 +1,18 @@
+mia (2.4.6-3) UNRELEASED; urgency=medium
+
+  [ Andreas Tille ]
+  * Remove invalid fields from debian/upstream/metadata
+  * Remove Watch field from debian/upstream/metadata
+
+  [ Gert Wollny ]
+  * d/*: run cme fix dpkg   
+- fix VCS urls   
+- fix d/copyright format URL
+  * d/control: build using libvtk7-dev
+  * d/* update standards to 4.2.1 (no changes needed)
+
+ -- Gert Wollny   Sun, 09 Sep 2018 19:51:10 +0200
+
 mia (2.4.6-2) unstable; urgency=medium
 
   * d/p/mia_226_glibc_227: use numeric_limits::max() Closes: #891337


=
debian/control
=
@@ -32,7 +32,7 @@ Build-Depends-Indep: docbook-xsl,
  graphviz,
  libjs-mathjax,
  xsltproc
-Standards-Version: 4.1.5
+Standards-Version: 4.2.1
 Vcs-Browser: https://salsa.debian.org/med-team/mia
 Vcs-Git: https://salsa.debian.org/med-team/mia.git
 Homepage: http://mia.sourceforge.net



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[med-svn] [Git][med-team/gdcm] Pushed new tag debian/2.8.7-2

2018-09-09 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.8.7-2 at Debian Med / gdcm

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[med-svn] [Git][med-team/gdcm][master] Upload to unstable

2018-09-09 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
1b9e33b7 by Gert Wollny at 2018-09-09T11:38:30Z
Upload to unstable

- - - - -


1 changed file:

- debian/changelog


Changes:

=
debian/changelog
=
@@ -1,5 +1,4 @@
-
-gdcm (2.8.7-2) UNRELEASED; urgency=medium
+gdcm (2.8.7-2) unstable; urgency=medium
 
   [ Andreas Tille ]
   * Remove myself from Uploaders
@@ -7,8 +6,11 @@ gdcm (2.8.7-2) UNRELEASED; urgency=medium
   [ Gert Wollny ]
   * switch to python3 Closes: #906535
   * d/control.in: Depend on python3 versions of packages
+  * d/dontrol: Build-depend only on default python3 version,  the 
+current gdcm build  only supports one python version at a time
+  * d/.gitlab: build from master branch
 
- -- Gert Wollny   Sat, 08 Sep 2018 12:53:00 +0200
+ -- Gert Wollny   Sun, 09 Sep 2018 13:36:59 +0200
 
 gdcm (2.8.7-1python3exp1) experimental; urgency=medium
 



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[med-svn] [Git][med-team/gdcm][master] 2 commits: d/dontrol: Build-depend only on default python3 version

2018-09-08 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / gdcm


Commits:
ecc2fc7f by Gert Wollny at 2018-09-08T10:57:46Z
d/dontrol: Build-depend only on default python3 version

- - - - -
4c9286e2 by Gert Wollny at 2018-09-08T11:34:18Z
d/.gitlab: build from master branch

- - - - -


3 changed files:

- debian/.gitlab-ci.yml
- debian/control
- debian/control.in


Changes:

=
debian/.gitlab-ci.yml
=
@@ -8,7 +8,7 @@ build:
   script:
 - git checkout pristine-tar 
 - git pull 
-- git checkout experimental
+- git checkout master
 - git pull 
 # silence build to not exceed build log size of gitlab-ci
 - gbp buildpackage -uc -us 2>&1 >../build.log


=
debian/control
=
@@ -10,7 +10,7 @@ Build-Depends: cmake (>= 2.8.9),
   default-jdk,
dh-strip-nondeterminism, 
dh-python, 
-  python3-all-dev,
+  python3-dev,
   pvrg-jpeg,
   uuid-dev,
   libz-dev,


=
debian/control.in
=
@@ -10,7 +10,7 @@ Build-Depends: cmake (>= 2.8.9),
   default-jdk,
dh-strip-nondeterminism, 
dh-python, 
-  python3-all-dev,
+  python3-dev,
   pvrg-jpeg,
   uuid-dev,
   libz-dev,



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[med-svn] [Git][med-team/libminc] Pushed new tag debian/2.4.03-2

2018-08-31 Thread Gert Wollny
Gert Wollny pushed new tag debian/2.4.03-2 at Debian Med / libminc

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[med-svn] [Git][med-team/libminc][master] 2 commits: d/libminc-dev make it executable

2018-08-30 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / libminc


Commits:
731d8698 by Gert Wollny at 2018-08-30T16:50:30Z
d/libminc-dev make it executable

- - - - -
487fd3b8 by Gert Wollny at 2018-08-30T16:54:07Z
Update changelog for upload to unstable

- - - - -


2 changed files:

- debian/changelog
- debian/libminc-dev.install


Changes:

=
debian/changelog
=
@@ -1,6 +1,8 @@
-libminc (2.4.03-2) UNRELEASED; urgency=medium
+libminc (2.4.03-2) unstable; urgency=medium
 
-  * d/: Install cmake file in the correct location (locutusofborg)
+  * Team upload 
+  * d/: Install cmake file in the correct location Closes: #907553
+(locutusofborg)
 
  -- Gert Wollny   Thu, 30 Aug 2018 18:44:55 +0200
 


=
debian/libminc-dev.install
=



View it on GitLab: 
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-- 
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[med-svn] [Git][med-team/libminc][master] 2 commits: d/: Install cmake file in the correct location (locutusofborg)

2018-08-30 Thread Gert Wollny
Gert Wollny pushed to branch master at Debian Med / libminc


Commits:
64221da5 by Gert Wollny at 2018-08-30T16:44:44Z
d/: Install cmake file in the correct location (locutusofborg)

- - - - -
0ec5604f by Gert Wollny at 2018-08-30T16:45:14Z
Update chaneglog

- - - - -


3 changed files:

- debian/changelog
- debian/control
- debian/libminc-dev.install


Changes:

=
debian/changelog
=
@@ -1,3 +1,9 @@
+libminc (2.4.03-2) UNRELEASED; urgency=medium
+
+  * d/: Install cmake file in the correct location (locutusofborg)
+
+ -- Gert Wollny   Thu, 30 Aug 2018 18:44:55 +0200
+
 libminc (2.4.03-1) unstable; urgency=medium
 
   * re-upload to sid 


=
debian/control
=
@@ -5,6 +5,7 @@ Uploaders: Steve M. Robbins ,
 Section: science
 Priority: optional
 Build-Depends: debhelper (>= 10),
+   dh-exec (>=0.3),
cmake,
libnetcdf-dev,
libnifti-dev,


=
debian/libminc-dev.install
=
@@ -1,5 +1,6 @@
+#! /usr/bin/dh-exec
 usr/lib/*/lib*.so
-usr/lib/*/cmake/*.cmake
+usr/lib/${DEB_HOST_MULTIARCH}/cmake/*.cmake  
usr/lib/${DEB_HOST_MULTIARCH}/cmake/LIBMINC/
 usr/include/*
 
 



View it on GitLab: 
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