Help to build libsmithwaterman with gcc-8 needed

[Andreas Tille]

Hi,

I thinks I've fixed the issue for bug #897797 in Git[1] for
libsmithwaterman but somehow it fails to build for a different
reason now.  Any idea why this might happen:

...
make  all-am
make[2]: Entering directory '/build/libsmithwaterman-0.0+git20160702.2610e25'
g++ -DHAVE_CONFIG_H -I.   -I. -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 
-fdebug-prefix-map=/build/libsmithwaterman-0.0+git20160702.2610e25=. 
-fstack-protector-strong -Wformat -Werror=format-security -c -o smithwaterman.o 
smithwaterman.cpp
/bin/bash ./libtool  --tag=CXX   --mode=link g++  -g -O2 
-fdebug-prefix-map=/build/libsmithwaterman-0.0+git20160702.2610e25=. 
-fstack-protector-strong -Wformat -Werror=format-security  -  Wl,-z,relro 
-Wl,-z,now -o smithwaterman smithwaterman.o -lsmithwaterman -ldisorder
libtool: link: g++ -g -O2 
-fdebug-prefix-map=/build/libsmithwaterman-0.0+git20160702.2610e25=. 
-fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro 
-Wl,-z -Wl,now -o smithwaterman smithwaterman.o  -lsmithwaterman -ldisorder
/usr/bin/ld: cannot find -lsmithwaterman
collect2: error: ld returned 1 exit status
...


Any hints?

Kind regards

 Andreas.


[1] https://salsa.debian.org/med-team/libsmithwaterman

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Bug#905375: RFS: bitz-server/2.0.1-1

[Jörg Frings-Fürst]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Hi Herbert,


Am Samstag, den 04.08.2018, 09:05 -0300 schrieb Herbert Fortes:
> Hi,
> 
>  > -BEGIN PGP SIGNED MESSAGE-
>  > Hash: SHA512
>  >
>  > retitle 905375 RFS: bitz-server/2.0.1-1
>  > thanks
>  >
> 
> I ran 'blhc --all ../*.build and there are some
> 
> CXXFLAGS missing (-fPIE)
> LDFLAGS missing (-fPIE -pie)
> 
> I saw debian/rules has 'hardening=+all' but can
> you please add:
> 
> export DEB_CXXFLAGS_MAINT_APPEND  = -fPIE
> export DEB_LDFLAGS_MAINT_APPEND = -fPIE -pie
> 

Many thanks!!

Changed, tested and uploaded to mentors again.


> 
> 
> Regards,
> Herbert
> 

CU 
Jörg
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Bug#905455: RFS: dmidecode/3.1-2

[Jörg Frings-Fürst]

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Hash: SHA512

Package: sponsorship-requests
Severity: normal

Dear mentors,

  I am looking for a sponsor for my package "dmidecode"

   Package name: dmidecode
   Version : 3.1-2
   Upstream Author : dmidecode-de...@nongnu.org
   URL : https://nongnu.org/dmidecode/
   License : GPL-2+
   Section : utils

  It builds those binary packages:

 dmidecode  - SMBIOS/DMI table decoder
 dmidecode-udeb - SMBIOS/DMI table decoder (udeb) (udeb)

  To access further information about this package, please visit the
following URL:

  https://mentors.debian.net/package/dmidecode


  Alternatively, one can download the package with dget using this
command:

dget -x 
https://mentors.debian.net/debian/pool/main/d/dmidecode/dmidecode_3.1-2.dsc
  
  Changes since the last upload:

  * debian/control:
- Change to my new email address.
- Use secure homepage URI.
- Switch Vcs-* to new location (Closes: #902259).
  * debian/copyright:
- Change to my new email address.
- Use secure copyright format URI.
- Add year 2018 to debian/*.
  * debian/watch:
- Use secure URI.
  * Declare compliance with Debian Policy 4.1.5 (No changes needed).
  * Migrate to debhelper 11:
- Change debian/compat to 11.
- Bump minimum debhelper version in debian/control to >= 11.

  Regards,
   Jörg Frings-Fürst
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Old pgp Key: BE581B6E (revoked since 2014-12-31).

Jörg Frings-Fürst
D-54470 Lieser


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My wish list: 
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Bug#905053: RFS: trojan/1.5.1-1 [ITP]

[GreaterFire]

Dear mentors,

The upstream has been updated to 1.5.2, so I updated the package accordingly.

Get the newer package by:

  dget -x 
https://mentors.debian.net/debian/pool/main/t/trojan/trojan_1.5.2-1.dsc

Thanks,
GreaterFire

Bug#905428: marked as done (RFS: shotwell/0.28.4-1)

[Debian Bug Tracking System]

Your message dated Sat, 4 Aug 2018 18:43:02 +0200
with message-id <20180804164302.42oy6n5f3sbzc...@angband.pl>
and subject line Re: Bug#905428: RFS: shotwell/0.28.4-1
has caused the Debian Bug report #905428,
regarding RFS: shotwell/0.28.4-1
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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-- 
905428: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=905428
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Contact ow...@bugs.debian.org with problems
--- Begin Message ---
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Package: sponsorship-requests
Severity: normal [important for RC bugs, wishlist for new packages]

Dear mentors,

  I am looking for a sponsor for my package "shotwell"

   Package name: shotwell
   Version : 0.28.4-1
   Upstream Author : Jim Nelson 
   URL : https://wiki.gnome.org/Apps/Shotwell
   License : LGPL-2.1, CC-BY-SA-3.0, GPL-2+
   Section : gnome

  It builds those binary packages:

 shotwell- digital photo organizer
 shotwell-common - digital photo organizer - common files

  To access further information about this package, please visit the
following URL:

  https://mentors.debian.net/package/shotwell


  Alternatively, one can download the package with dget using this
command:

dget -x 
https://mentors.debian.net/debian/pool/main/s/shotwell/shotwell_0.28.4-1.dsc

  Changes since the last upload:

   * New upstream release.


  Regards,
   Jörg Frings-Fürst

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-END PGP SIGNATURE-
--- End Message ---
--- Begin Message ---
On Sat, Aug 04, 2018 at 02:52:29PM +0200, Jörg Frings-Fürst wrote:
>Package name: shotwell
>Version : 0.28.4-1

>   Changes since the last upload:
> 
>* New upstream release.

✓

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Bug#880991: marked as done (RFS: chapel-1.16/1.16.0-1 [ITP])

[Debian Bug Tracking System]

Your message dated Sat, 04 Aug 2018 16:20:17 +
with message-id 
and subject line closing RFS: chapel-1.16/1.16.0-1 [ITP]
has caused the Debian Bug report #880991,
regarding RFS: chapel-1.16/1.16.0-1 [ITP]
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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--- Begin Message ---
Package: sponsorship-requests
Severity: wishlist

Dear mentors,

I am looking for a sponsor for the package "chapel-1.16". This is the compiler 
for Chapel, the productive parallel programming language.


 * Package name: chapel-1.16
   Version : 1.16.0-1
   Upstream Author : balbre...@cray.com
 * URL : https://chapel-lang.org
 * License : Apache 2.0
   Section : devel

  It builds those binary packages:

 chapel-1.16 - productive parallel computing
 chapel-common-1.16 - productive parallel computing (common files)
 chapel-compiler-1.16 - productive parallel computing (compiler)
 chapel-doc-1.16 - productive parallel computing (documentation)
 chapel-runtime-1.16 - productive parallel computing (runtime)

  To access further information about this package, please visit the following 
URL:

  https://mentors.debian.net/package/chapel-1.16


  Alternatively, here is the repository for this project's Debian package:

  https://github.com/chapel-lang/chapel-packaging/tree/master/debian

  
Alternatively, one can download the package with dget using this command:

dget -x 
https://mentors.debian.net/debian/pool/main/c/chapel-1.16/chapel-1.16_1.16.0-1.dsc

  More information about hello can be obtained from https://www.example.com--- End Message ---

Bug#905428: RFS: shotwell/0.28.4-1

[Jörg Frings-Fürst]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Package: sponsorship-requests
Severity: normal [important for RC bugs, wishlist for new packages]

Dear mentors,

  I am looking for a sponsor for my package "shotwell"

   Package name: shotwell
   Version : 0.28.4-1
   Upstream Author : Jim Nelson 
   URL : https://wiki.gnome.org/Apps/Shotwell
   License : LGPL-2.1, CC-BY-SA-3.0, GPL-2+
   Section : gnome

  It builds those binary packages:

 shotwell- digital photo organizer
 shotwell-common - digital photo organizer - common files

  To access further information about this package, please visit the
following URL:

  https://mentors.debian.net/package/shotwell


  Alternatively, one can download the package with dget using this
command:

dget -x 
https://mentors.debian.net/debian/pool/main/s/shotwell/shotwell_0.28.4-1.dsc

  Changes since the last upload:

   * New upstream release.


  Regards,
   Jörg Frings-Fürst

- -- 
New:
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GPG Key: 8CA1D25D
CAcert Key S/N : 0E:D4:56

Old pgp Key: BE581B6E (revoked since 2014-12-31).

Jörg Frings-Fürst
D-54470 Lieser


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Bug#905375: RFS: bitz-server/2.0.1-1

[Herbert Fortes]

Hi,

> -BEGIN PGP SIGNED MESSAGE-
> Hash: SHA512
>
> retitle 905375 RFS: bitz-server/2.0.1-1
> thanks
>

I ran 'blhc --all ../*.build and there are some

CXXFLAGS missing (-fPIE)
LDFLAGS missing (-fPIE -pie)

I saw debian/rules has 'hardening=+all' but can
you please add:

export DEB_CXXFLAGS_MAINT_APPEND  = -fPIE
export DEB_LDFLAGS_MAINT_APPEND = -fPIE -pie



Regards,
Herbert

Re: bison help needed

[Dan Kegel]

On Fri, Aug 3, 2018 at 10:43 PM, Andreas Tille  wrote:
>> +export DEB_CXXFLAGS_MAINT_APPEND=-fpermissive
>
> I tried this but the error remains exactly the same.

Right, but looking into it, I got the feeling that the error message
was somewhat inaccurate, and the compiler was unhappy about
some real problem with the arguments to that function.

>> but I wonder how many arguments yyparse and yyerror are really
>> supposed to have; there may be a bit of confusion there.
>
> Sorry, I do not understand this.

Well, interact.cc has

interact.cc:int yyparse(UserLevelRewritingContext::ParseResult*);
interact.cc:  bool parseError = yyparse();

and surface.yy has

surface.yy:%parse-param {void* YYPARSE_PARAM}

which suggests to me that yyparse has one argument... with some handwaving
about its actual type.  But top.yy has
top.yy:%parse-param {void* YYPARSE_PARAM}
top.yy:%parse-param {UserLevelRewritingContext::ParseResult* parseResult}
and the generated surface.{cc,h} has
surface.cc:yyparse (void* YYPARSE_PARAM,
UserLevelRewritingContext::ParseResult* parseResult)
surface.h:int yyparse (void* YYPARSE_PARAM,
UserLevelRewritingContext::ParseResult* parseResult);
so yyparse has two arguments.

I think that means that when you imported upstream version 2.7.1, you
should have removed
debian/patches/bison-parse-param.patch
at which point maybe you don't need -fpermissive anyway (possibly).

Or something like that :-)  I'm no expert, and it's all very twisty, isn't it?
- Dan

Bug#905398: marked as done (RFS: wolfssl/3.15.3+dfsg-2 [RC])

[Debian Bug Tracking System]

Your message dated Sat, 04 Aug 2018 10:20:09 +
with message-id 
and subject line closing RFS: wolfssl/3.15.3+dfsg-2 [RC]
has caused the Debian Bug report #905398,
regarding RFS: wolfssl/3.15.3+dfsg-2 [RC]
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
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--- Begin Message ---
Package: sponsorship-requests
Severity: important

Dear mentors,

I am looking for a sponsor for my package "wolfssl"

* Package name: wolfssl
  Version : 3.15.3+dfsg-2
  Upstream Author : wolfSSL, Inc.
* URL : https://www.wolfssl.com/products/wolfssl/
* License : GPL-2+ et al.
  Section : libs

It builds those binary packages:

 libwolfssl-dev - Development files for the wolfSSL encryption library
 libwolfssl18 - wolfSSL encryption library

To access further information about this package, please visit the
following URL:

  https://mentors.debian.net/package/wolfssl


Alternatively, one can download the package with dget using this command:

  dget -x 
https://mentors.debian.net/debian/pool/main/w/wolfssl/wolfssl_3.15.3+dfsg-2.dsc

More information about hello can be obtained from https://www.example.com.

Changes since the last upload:

* Ship wolfssl/control.h (Closes: #904711)
* Enabled TLS 1.3 (Closes: #904710)

Regards,
 Felix Lechner
--- End Message ---
--- Begin Message ---
Package wolfssl version 3.15.3+dfsg-2 is in unstable now.
https://packages.qa.debian.org/wolfssl--- End Message ---