Bug#1055228: Bug#1055750: Bug#1055228: plplot: FTBFS on armhf (test segfault)
plplot got removed from armhf, the severity of this issue could be lowered to important to not have the package removed from testing. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056891: statsmodels: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:06:58 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru statsmodels-0.14.0+dfsg/debian/changelog statsmodels-0.14.0+dfsg/debian/changelog --- statsmodels-0.14.0+dfsg/debian/changelog2023-11-11 21:34:28.0 +0100 +++ statsmodels-0.14.0+dfsg/debian/changelog2023-12-10 16:14:11.0 +0100 @@ -1,3 +1,10 @@ +statsmodels (0.14.0+dfsg-5.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 16:14:11 +0100 + statsmodels (0.14.0+dfsg-5) unstable; urgency=medium * Allow building with Cython 3.0 (Closes: LP: #2043284) and cp 9.2. diff -Nru statsmodels-0.14.0+dfsg/debian/control statsmodels-0.14.0+dfsg/debian/control --- statsmodels-0.14.0+dfsg/debian/control 2023-08-19 22:57:43.0 +0200 +++ statsmodels-0.14.0+dfsg/debian/control 2023-12-10 16:14:11.0 +0100 @@ -9,7 +9,7 @@ Build-Depends: debhelper-compat (= 13), sphinx-common, dh-python (>= 3.20180313~), - cython3 (>= 0.29.32~), + cython3-legacy (>= 0.29.32~), # tries to build twice (arch/indep), which fails pybuild-plugin-pyproject, python3-all-dev, python3-colorama , -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056889: skimage: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:06:56 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The package still fails to build due to #1056132. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru skimage-0.22.0/debian/changelog skimage-0.22.0/debian/changelog --- skimage-0.22.0/debian/changelog 2023-10-05 08:46:12.0 +0200 +++ skimage-0.22.0/debian/changelog 2023-12-10 15:35:57.0 +0100 @@ -1,3 +1,10 @@ +skimage (0.22.0-2.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 15:35:57 +0100 + skimage (0.22.0-2) unstable; urgency=medium * Increase tolerance for moments test on 32 bit (again) diff -Nru skimage-0.22.0/debian/control skimage-0.22.0/debian/control --- skimage-0.22.0/debian/control 2023-10-05 08:44:10.0 +0200 +++ skimage-0.22.0/debian/control 2023-12-10 15:35:57.0 +0100 @@ -4,7 +4,7 @@ Ole Streicher Section: python Priority: optional -Build-Depends: cython3, +Build-Depends: cython3-legacy, debhelper-compat (= 13), dh-python, ninja-build, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056887: sfepy: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:06:55 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru sfepy-2021.4/debian/changelog sfepy-2021.4/debian/changelog --- sfepy-2021.4/debian/changelog 2023-01-22 18:12:28.0 +0100 +++ sfepy-2021.4/debian/changelog 2023-12-10 15:25:17.0 +0100 @@ -1,3 +1,10 @@ +sfepy (2021.4-4.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 15:25:17 +0100 + sfepy (2021.4-4) unstable; urgency=medium * Team upload. diff -Nru sfepy-2021.4/debian/control sfepy-2021.4/debian/control --- sfepy-2021.4/debian/control 2023-01-22 18:12:28.0 +0100 +++ sfepy-2021.4/debian/control 2023-12-10 15:25:17.0 +0100 @@ -3,7 +3,7 @@ Uploaders: Anton Gladky Section: python Priority: optional -Build-Depends: cython3, +Build-Depends: cython3-legacy, debhelper-compat (= 13), dh-python, ipython3, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056880: qutip: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:06:48 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The package still fails to build due to #1042704. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru qutip-4.7.1/debian/changelog qutip-4.7.1/debian/changelog --- qutip-4.7.1/debian/changelog2023-01-03 12:36:53.0 +0100 +++ qutip-4.7.1/debian/changelog2023-12-10 13:52:09.0 +0100 @@ -1,3 +1,10 @@ +qutip (4.7.1-2.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 13:52:09 +0100 + qutip (4.7.1-2) unstable; urgency=medium * Build-Depends: python3-ipython for tests (test_repr_svg) diff -Nru qutip-4.7.1/debian/control qutip-4.7.1/debian/control --- qutip-4.7.1/debian/control 2023-01-03 12:36:53.0 +0100 +++ qutip-4.7.1/debian/control 2023-12-10 13:52:09.0 +0100 @@ -9,7 +9,7 @@ python3-all, python3-all-dev, python3-setuptools, - cython3 (>= 0.29.20~), + cython3-legacy (>= 0.29.20~), python3-cvxopt, python3-matplotlib (>= 1.2.1~), python3-numpy (>= 1.16.6~), -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056878: qiskit-terra: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:06:47 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The package still fails to build due to #1027203. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru qiskit-terra-0.12.0/debian/changelog qiskit-terra-0.12.0/debian/changelog --- qiskit-terra-0.12.0/debian/changelog2022-03-12 23:23:22.0 +0100 +++ qiskit-terra-0.12.0/debian/changelog2023-12-10 13:45:38.0 +0100 @@ -1,3 +1,10 @@ +qiskit-terra (0.12.0-4.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 13:45:38 +0100 + qiskit-terra (0.12.0-4) unstable; urgency=medium * Team Upload. diff -Nru qiskit-terra-0.12.0/debian/control qiskit-terra-0.12.0/debian/control --- qiskit-terra-0.12.0/debian/control 2022-03-12 23:23:18.0 +0100 +++ qiskit-terra-0.12.0/debian/control 2023-12-10 13:45:37.0 +0100 @@ -5,7 +5,7 @@ Diego M. Rodriguez Section: science Priority: optional -Build-Depends: cython3 (>= 0.27.1), +Build-Depends: cython3-legacy (>= 0.27.1), debhelper-compat (= 13), dh-python, python3-all, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056881: qiskit-aer: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:06:46 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The package still fails to build due to #1056881. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru qiskit-aer-0.4.1/debian/changelog qiskit-aer-0.4.1/debian/changelog --- qiskit-aer-0.4.1/debian/changelog 2021-05-17 16:19:44.0 +0200 +++ qiskit-aer-0.4.1/debian/changelog 2023-12-10 13:35:42.0 +0100 @@ -1,3 +1,10 @@ +qiskit-aer (0.4.1-2.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 13:35:42 +0100 + qiskit-aer (0.4.1-2) unstable; urgency=medium * Use scikit-build instead of manual cmake. (Closes: #973791) diff -Nru qiskit-aer-0.4.1/debian/control qiskit-aer-0.4.1/debian/control --- qiskit-aer-0.4.1/debian/control 2021-05-17 15:47:36.0 +0200 +++ qiskit-aer-0.4.1/debian/control 2023-12-10 13:35:42.0 +0100 @@ -6,7 +6,7 @@ Diego M. Rodriguez Build-Depends: debhelper-compat (= 13), cmake, - cython3, + cython3-legacy, dh-python, libmuparserx-dev, libopenblas-dev, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056875: python-thinc: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:06:42 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru python-thinc-8.1.7/debian/changelog python-thinc-8.1.7/debian/changelog --- python-thinc-8.1.7/debian/changelog 2023-02-08 09:05:44.0 +0100 +++ python-thinc-8.1.7/debian/changelog 2023-12-10 13:22:59.0 +0100 @@ -1,3 +1,10 @@ +python-thinc (8.1.7-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 13:22:59 +0100 + python-thinc (8.1.7-1) unstable; urgency=medium [ Paul Wise ] diff -Nru python-thinc-8.1.7/debian/control python-thinc-8.1.7/debian/control --- python-thinc-8.1.7/debian/control 2023-02-08 09:05:44.0 +0100 +++ python-thinc-8.1.7/debian/control 2023-12-10 13:22:59.0 +0100 @@ -4,7 +4,7 @@ Section: python Testsuite: autopkgtest-pkg-python Priority: optional -Build-Depends: cython3, +Build-Depends: cython3-legacy, debhelper-compat (= 13), dh-python, pybuild-plugin-pyproject, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056845: pynfft: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:06:09 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The package still fails to build due to #1055704. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru pynfft-1.3.2/debian/changelog pynfft-1.3.2/debian/changelog --- pynfft-1.3.2/debian/changelog 2022-12-02 14:34:44.0 +0100 +++ pynfft-1.3.2/debian/changelog 2023-12-10 10:37:47.0 +0100 @@ -1,3 +1,10 @@ +pynfft (1.3.2-7.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 10:37:47 +0100 + pynfft (1.3.2-7) unstable; urgency=medium * Team Upload. diff -Nru pynfft-1.3.2/debian/control pynfft-1.3.2/debian/control --- pynfft-1.3.2/debian/control 2022-12-02 14:34:44.0 +0100 +++ pynfft-1.3.2/debian/control 2023-12-10 10:37:47.0 +0100 @@ -3,7 +3,7 @@ Uploaders: Ghislain Antony Vaillant Section: science Priority: optional -Build-Depends: cython3, +Build-Depends: cython3-legacy, debhelper-compat (= 13), dh-python, libnfft3-dev, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056836: pyfftw: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:59 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The package still fails to build due to #1055703. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru pyfftw-0.13.1/debian/changelog pyfftw-0.13.1/debian/changelog --- pyfftw-0.13.1/debian/changelog 2023-08-18 14:14:39.0 +0200 +++ pyfftw-0.13.1/debian/changelog 2023-12-10 09:56:01.0 +0100 @@ -1,3 +1,10 @@ +pyfftw (0.13.1-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 09:56:01 +0100 + pyfftw (0.13.1-1) unstable; urgency=medium * Team upload. diff -Nru pyfftw-0.13.1/debian/control pyfftw-0.13.1/debian/control --- pyfftw-0.13.1/debian/control2023-08-18 14:14:39.0 +0200 +++ pyfftw-0.13.1/debian/control2023-12-10 09:56:01.0 +0100 @@ -5,7 +5,7 @@ Priority: optional Build-Depends: debhelper-compat (= 13), dh-sequence-python3, - cython3, + cython3-legacy, libfftw3-dev, python3-all-dev, python3-numpy, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056832: pplpy: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:56 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru pplpy-0.8.9/debian/changelog pplpy-0.8.9/debian/changelog --- pplpy-0.8.9/debian/changelog2023-11-27 14:39:12.0 +0100 +++ pplpy-0.8.9/debian/changelog2023-12-10 09:44:15.0 +0100 @@ -1,3 +1,10 @@ +pplpy (0.8.9-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 09:44:15 +0100 + pplpy (0.8.9-1) unstable; urgency=medium [ Debian Janitor ] diff -Nru pplpy-0.8.9/debian/control pplpy-0.8.9/debian/control --- pplpy-0.8.9/debian/control 2023-11-27 14:39:12.0 +0100 +++ pplpy-0.8.9/debian/control 2023-12-10 09:44:15.0 +0100 @@ -6,7 +6,7 @@ Build-Depends: debhelper-compat (= 13), dh-python, - cython3, + cython3-legacy, libgmp-dev, libmpfr-dev, libmpc-dev, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056830: petsc4py: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:54 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru petsc4py-3.18.5/debian/changelog petsc4py-3.18.5/debian/changelog --- petsc4py-3.18.5/debian/changelog2023-03-06 11:15:53.0 +0100 +++ petsc4py-3.18.5/debian/changelog2023-12-10 09:23:49.0 +0100 @@ -1,3 +1,10 @@ +petsc4py (3.18.5-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 09:23:49 +0100 + petsc4py (3.18.5-1) unstable; urgency=medium * New upstream release. diff -Nru petsc4py-3.18.5/debian/control petsc4py-3.18.5/debian/control --- petsc4py-3.18.5/debian/control 2023-03-06 11:15:53.0 +0100 +++ petsc4py-3.18.5/debian/control 2023-12-10 09:23:49.0 +0100 @@ -7,7 +7,7 @@ Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev (>= 3.3), python3-distutils, - cython3 (>= 0.24~), + cython3-legacy (>= 0.24~), python3-numpy (>= 1:1.4.1-4~), libpetsc-real3.18-dev, libpetsc-complex3.18-dev, libpetsc64-real3.18-dev, libpetsc64-complex3.18-dev, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056826: openems: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:49 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The package still fails to build due to #1054794. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru openems-0.0.35+git20190103.6a75e98+dfsg.1/debian/changelog openems-0.0.35+git20190103.6a75e98+dfsg.1/debian/changelog --- openems-0.0.35+git20190103.6a75e98+dfsg.1/debian/changelog 2023-02-06 17:49:06.0 +0100 +++ openems-0.0.35+git20190103.6a75e98+dfsg.1/debian/changelog 2023-12-10 09:10:04.0 +0100 @@ -1,3 +1,10 @@ +openems (0.0.35+git20190103.6a75e98+dfsg.1-3.3) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 09:10:04 +0100 + openems (0.0.35+git20190103.6a75e98+dfsg.1-3.2) unstable; urgency=medium * Non-maintainer upload. diff -Nru openems-0.0.35+git20190103.6a75e98+dfsg.1/debian/control openems-0.0.35+git20190103.6a75e98+dfsg.1/debian/control --- openems-0.0.35+git20190103.6a75e98+dfsg.1/debian/control2023-02-06 17:49:06.0 +0100 +++ openems-0.0.35+git20190103.6a75e98+dfsg.1/debian/control2023-12-10 09:10:04.0 +0100 @@ -15,7 +15,7 @@ # It is called octave-pkg-dev in stretch # and dh-octave in sid dh-octave | octave-pkg-dev, - cython3, + cython3-legacy, chrpath, dh-python, python3-all-dev, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056822: mpi4py-fft: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:44 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru mpi4py-fft-2.0.5/debian/changelog mpi4py-fft-2.0.5/debian/changelog --- mpi4py-fft-2.0.5/debian/changelog 2023-06-19 19:42:35.0 +0200 +++ mpi4py-fft-2.0.5/debian/changelog 2023-12-10 08:40:04.0 +0100 @@ -1,3 +1,10 @@ +mpi4py-fft (2.0.5-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 08:40:04 +0100 + mpi4py-fft (2.0.5-1) unstable; urgency=medium [ Debian Janitor ] diff -Nru mpi4py-fft-2.0.5/debian/control mpi4py-fft-2.0.5/debian/control --- mpi4py-fft-2.0.5/debian/control 2023-06-19 19:42:35.0 +0200 +++ mpi4py-fft-2.0.5/debian/control 2023-12-10 08:40:04.0 +0100 @@ -4,7 +4,7 @@ Maintainer: Debian Science Maintainers Uploaders: Drew Parsons Build-Depends: debhelper-compat (= 13), - cython3 (>= 0.25~), + cython3-legacy (>= 0.25~), dh-python, libfftw3-dev, mpi-default-dev, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056820: mpi4py: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:43 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru mpi4py-3.1.5/debian/changelog mpi4py-3.1.5/debian/changelog --- mpi4py-3.1.5/debian/changelog 2023-10-30 10:38:49.0 +0100 +++ mpi4py-3.1.5/debian/changelog 2023-12-10 08:29:15.0 +0100 @@ -1,3 +1,10 @@ +mpi4py (3.1.5-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 08:29:15 +0100 + mpi4py (3.1.5-1) unstable; urgency=medium * Team upload. diff -Nru mpi4py-3.1.5/debian/control mpi4py-3.1.5/debian/control --- mpi4py-3.1.5/debian/control 2023-10-30 10:38:49.0 +0100 +++ mpi4py-3.1.5/debian/control 2023-12-10 08:29:15.0 +0100 @@ -9,7 +9,7 @@ mpi-default-dev, mpi-default-bin, rsh-client | openssh-client, - cython3, + cython3-legacy, python3-all-dev, python3-numpy, python3-sphinx -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056819: mlpy: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:41 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The build still fails due to #1054748. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru mlpy-3.5.0+ds/debian/changelog mlpy-3.5.0+ds/debian/changelog --- mlpy-3.5.0+ds/debian/changelog 2023-02-03 18:33:08.0 +0100 +++ mlpy-3.5.0+ds/debian/changelog 2023-12-10 08:23:09.0 +0100 @@ -1,3 +1,10 @@ +mlpy (3.5.0+ds-2.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sun, 10 Dec 2023 08:23:09 +0100 + mlpy (3.5.0+ds-2) unstable; urgency=medium [ Debian Janitor ] diff -Nru mlpy-3.5.0+ds/debian/control mlpy-3.5.0+ds/debian/control --- mlpy-3.5.0+ds/debian/control2023-02-03 18:33:08.0 +0100 +++ mlpy-3.5.0+ds/debian/control2023-12-10 08:23:09.0 +0100 @@ -8,7 +8,7 @@ Build-Depends: debhelper-compat (= 13), dh-python, libgsl-dev, - cython3, + cython3-legacy, python3-all-dev, python3-numpy, python3-sphinx, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056811: libgpuarray: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:34 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The build still fails due to #1055690. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru libgpuarray-0.7.6/debian/changelog libgpuarray-0.7.6/debian/changelog --- libgpuarray-0.7.6/debian/changelog 2023-08-20 14:46:32.0 +0200 +++ libgpuarray-0.7.6/debian/changelog 2023-12-09 21:40:12.0 +0100 @@ -1,3 +1,10 @@ +libgpuarray (0.7.6-14.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sat, 09 Dec 2023 21:40:12 +0100 + libgpuarray (0.7.6-14) unstable; urgency=medium * Tests: add more debug output (see #1031414). diff -Nru libgpuarray-0.7.6/debian/control libgpuarray-0.7.6/debian/control --- libgpuarray-0.7.6/debian/control2023-01-05 21:30:57.0 +0100 +++ libgpuarray-0.7.6/debian/control2023-12-09 21:40:12.0 +0100 @@ -5,7 +5,7 @@ Section: libs Priority: optional Build-Depends: cmake, - cython3 (>= 0.25), + cython3-legacy (>= 0.25), debhelper-compat (= 13), dpkg-dev (>= 1.17.14), dh-python, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056807: h5py: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:28 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru h5py-3.9.0/debian/changelog h5py-3.9.0/debian/changelog --- h5py-3.9.0/debian/changelog 2023-10-13 13:16:16.0 +0200 +++ h5py-3.9.0/debian/changelog 2023-12-09 20:49:03.0 +0100 @@ -1,3 +1,10 @@ +h5py (3.9.0-4.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sat, 09 Dec 2023 20:49:03 +0100 + h5py (3.9.0-4) unstable; urgency=medium * Team upload. diff -Nru h5py-3.9.0/debian/control h5py-3.9.0/debian/control --- h5py-3.9.0/debian/control 2023-10-13 13:16:16.0 +0200 +++ h5py-3.9.0/debian/control 2023-12-09 20:49:03.0 +0100 @@ -4,7 +4,7 @@ Mo Zhou , Section: python Priority: optional -Build-Depends: cython3 (>= 0.29.15), +Build-Depends: cython3-legacy (>= 0.29.15), debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056806: guiqwt: ftbfs with cython 3.0.x
Control: tags -1 pending On Sun, 26 Nov 2023 10:05:27 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru guiqwt-4.4.1/debian/changelog guiqwt-4.4.1/debian/changelog --- guiqwt-4.4.1/debian/changelog 2023-07-28 16:33:19.0 +0200 +++ guiqwt-4.4.1/debian/changelog 2023-12-09 20:37:51.0 +0100 @@ -1,3 +1,10 @@ +guiqwt (4.4.1-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sat, 09 Dec 2023 20:37:51 +0100 + guiqwt (4.4.1-1) unstable; urgency=medium * New upstream version 4.4.1 diff -Nru guiqwt-4.4.1/debian/control guiqwt-4.4.1/debian/control --- guiqwt-4.4.1/debian/control 2023-07-28 16:33:19.0 +0200 +++ guiqwt-4.4.1/debian/control 2023-12-09 20:37:51.0 +0100 @@ -5,7 +5,7 @@ Section: science Priority: optional Build-Depends: - cython3, + cython3-legacy, debhelper-compat (= 13), dh-python, dh-sequence-numpy3, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056802: gensim: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:24 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru gensim-4.2.0+dfsg/debian/changelog gensim-4.2.0+dfsg/debian/changelog --- gensim-4.2.0+dfsg/debian/changelog 2022-05-05 06:50:46.0 +0200 +++ gensim-4.2.0+dfsg/debian/changelog 2023-12-09 19:48:30.0 +0100 @@ -1,3 +1,10 @@ +gensim (4.2.0+dfsg-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sat, 09 Dec 2023 19:48:30 +0100 + gensim (4.2.0+dfsg-1) unstable; urgency=medium * New upstream release. diff -Nru gensim-4.2.0+dfsg/debian/control gensim-4.2.0+dfsg/debian/control --- gensim-4.2.0+dfsg/debian/control2022-05-05 05:43:59.0 +0200 +++ gensim-4.2.0+dfsg/debian/control2023-12-09 19:48:30.0 +0100 @@ -5,7 +5,7 @@ Section: python Priority: optional Build-Depends: - cython3, + cython3-legacy, debhelper-compat (= 13), dh-python, # for _save_test_model -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056797: cypari2: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:19 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. The package still fails to build due to #1055731. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru cypari2-2.1.2/debian/changelog cypari2-2.1.2/debian/changelog --- cypari2-2.1.2/debian/changelog 2022-12-26 03:03:37.0 +0100 +++ cypari2-2.1.2/debian/changelog 2023-12-09 18:53:02.0 +0100 @@ -1,3 +1,10 @@ +cypari2 (2.1.2-4.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + + -- Bas Couwenberg Sat, 09 Dec 2023 18:53:02 +0100 + cypari2 (2.1.2-4) unstable; urgency=medium [ Stefano Rivera ] diff -Nru cypari2-2.1.2/debian/control cypari2-2.1.2/debian/control --- cypari2-2.1.2/debian/control2022-12-26 03:03:37.0 +0100 +++ cypari2-2.1.2/debian/control2023-12-09 18:53:02.0 +0100 @@ -7,7 +7,7 @@ debhelper-compat (= 11), dh-python (>= 3.20180313), dh-sequence-python3, - cython3 (>= 0.26), + cython3-legacy (>= 0.26), libgmp-dev, libpari-dev (>= 2.15.1~pre1), pari-doc (>= 2.15.1~pre1), -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1056787: astra-toolbox: ftbfs with cython 3.0.x
Control: tags -1 patch On Sun, 26 Nov 2023 10:05:08 + Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the short term workaround. It also updates the octave-dev build dependency to make them installable. The build still fails for another reason: TEST FAILED: ../debian/python3-astra-toolbox/usr/local/lib/python3.11/dist-packages/ does NOT support .pth files bad install directory or PYTHONPATH Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru astra-toolbox-2.1.0/debian/changelog astra-toolbox-2.1.0/debian/changelog --- astra-toolbox-2.1.0/debian/changelog2023-06-20 17:36:46.0 +0200 +++ astra-toolbox-2.1.0/debian/changelog2023-12-09 17:54:17.0 +0100 @@ -1,3 +1,11 @@ +astra-toolbox (2.1.0-3.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Switch to cython3-legacy. + * Change liboctave-dev to octave-dev. + + -- Bas Couwenberg Sat, 09 Dec 2023 17:54:17 +0100 + astra-toolbox (2.1.0-3) unstable; urgency=medium * Team upload diff -Nru astra-toolbox-2.1.0/debian/control astra-toolbox-2.1.0/debian/control --- astra-toolbox-2.1.0/debian/control 2023-06-20 17:36:28.0 +0200 +++ astra-toolbox-2.1.0/debian/control 2023-12-09 17:54:17.0 +0100 @@ -11,11 +11,11 @@ nvidia-cuda-toolkit-gcc, clang, python3-dev, - cython3, + cython3-legacy, python3-numpy, python3-six, python3-scipy, - liboctave-dev, + octave-dev, dh-python, Standards-Version: 4.6.0 Homepage: https://github.com/astra-toolbox/astra-toolbox -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1052037: fasttext: Can't be imported on armel
Something like this may suffice as a workaround: diff --git a/debian/rules b/debian/rules index 9ebd14e..ab49761 100755 --- a/debian/rules +++ b/debian/rules @@ -6,6 +6,11 @@ export DEB_BUILD_MAINT_OPTIONS = hardening=+all DPKG_EXPORT_BUILDFLAGS = 1 include /usr/share/dpkg/buildflags.mk +include /usr/share/dpkg/architecture.mk + +ifneq (,$(filter $(DEB_BUILD_ARCH),armel)) +export DEB_LDFLAGS_MAINT_APPEND = -latomic +endif # see ENVIRONMENT in dpkg-buildflags(1) # package maintainers to append CFLAGS Something like this would be better: https://github.com/ccache/ccache/pull/723/files Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1041457: python-escript: FTBFS on i386
Control: severity -1 important python-escript was removed from i386 (#1042939). Reducing the severity accordingly. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1039871: python-xarray: FTBFS (PermissionError: [Errno 13] Permission denied: '/sbuild-nonexistent')
Control: tags -1 patch The attached patch resolves the FTBFS by nbsphinx_allow_errors = False from doc/conf.py Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1diff -Nru python-xarray-2023.06.0/debian/changelog python-xarray-2023.06.0/debian/changelog --- python-xarray-2023.06.0/debian/changelog2023-06-27 15:47:04.0 +0200 +++ python-xarray-2023.06.0/debian/changelog2023-06-29 06:58:55.0 +0200 @@ -1,3 +1,11 @@ +python-xarray (2023.06.0-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Add patch to fix FTBFS. +(closes: #1039871) + + -- Bas Couwenberg Thu, 29 Jun 2023 06:58:55 +0200 + python-xarray (2023.06.0-1) unstable; urgency=medium * New upstream release diff -Nru python-xarray-2023.06.0/debian/patches/series python-xarray-2023.06.0/debian/patches/series --- python-xarray-2023.06.0/debian/patches/series 2023-06-27 15:47:04.0 +0200 +++ python-xarray-2023.06.0/debian/patches/series 2023-06-29 06:55:24.0 +0200 @@ -12,3 +12,4 @@ xfail-pad-constant.patch no-sphinx-design.patch xfail-on-random-patch +xarray_tutorial_data.patch diff -Nru python-xarray-2023.06.0/debian/patches/xarray_tutorial_data.patch python-xarray-2023.06.0/debian/patches/xarray_tutorial_data.patch --- python-xarray-2023.06.0/debian/patches/xarray_tutorial_data.patch 1970-01-01 01:00:00.0 +0100 +++ python-xarray-2023.06.0/debian/patches/xarray_tutorial_data.patch 2023-06-29 06:58:55.0 +0200 @@ -0,0 +1,16 @@ +Description: Fix FBTBFS, docs write to $HOME. +Author: Bas Couwenberg +Bug-Debian: https://bugs.debian.org/1039871 +Forwarded: not-needed + +--- a/doc/conf.py b/doc/conf.py +@@ -63,8 +63,6 @@ except ImportError: + ] + ) + +-nbsphinx_allow_errors = False +- + # -- General configuration + + # If your documentation needs a minimal Sphinx version, state it here. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1038614: vtk9: Stop using netcdf-cxx-legacy
Control: tags -1 pending This is fixed in the experimental branch: https://salsa.debian.org/science-team/vtk9/-/commit/b4d5c6bf1de79c3ef0e75cd94d176f0c2fbc99f4 Anton, please pull the changes to ensure they're included when you move the package from experimental to unstable. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#996976: vtk6: Remove vtk6 from the Debian 12
itksnap is the only remain rdep of vtk6: sebastic@coccia:~$ dak rm -Rn vtk6 Will remove the following packages from unstable: libvtk6-dev | 6.3.0+dfsg2-8.1+b1 | amd64, arm64, armel, armhf, i386, mips64el, mipsel, ppc64el, s390x libvtk6-qt-dev | 6.3.0+dfsg2-8.1+b1 | amd64, arm64, armel, armhf, i386, mips64el, mipsel, ppc64el, s390x libvtk6.3 | 6.3.0+dfsg2-8.1+b1 | amd64, arm64, armel, armhf, i386, mips64el, mipsel, ppc64el, s390x libvtk6.3-qt | 6.3.0+dfsg2-8.1+b1 | amd64, arm64, armel, armhf, i386, mips64el, mipsel, ppc64el, s390x vtk6 | 6.3.0+dfsg2-8.1 | source Maintainer: Debian Science Team --- Reason --- -- Checking reverse dependencies... # Broken Depends: itksnap: itksnap [amd64 i386] # Broken Build-Depends: itksnap: libvtk6-dev Dependency problem found. The maintainer has not responded to the RC bugs affecting itksnap (#1013152 & #1010549). itksnap should be removed from Debian along with vtk6, or itksnap should be update to 4.0 which claims to support VTK 9: " * Updated library references to ITK 5, VTK 9, and Qt 6 " https://github.com/pyushkevich/itksnap/blob/v4.0.0/ReleaseNotes.md#version-400 Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1029249: scikit-learn: FTBFS: build-dependency not installable: python-numpy-doc
Control: tags -1 patch A fix has been committed in git: https://salsa.debian.org/science-team/scikit-learn/-/commit/2f2538d7538f693f3600713fc816c07f8a0990da Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1029109: cimg: build dependency gone after tiff transition
Control: tags -1 patch A patch has been committed in git: https://salsa.debian.org/science-team/cimg/-/commit/1dc81d57ed0d293cf2b7c208da25ece765f64004 Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1028695: python-hdf5storage: FTBFS: build-dependency not installable: python-numpy-doc
Control: tags -1 pending A fix has been committed in git: https://salsa.debian.org/science-team/python-hdf5storage/-/commit/78d2bc277af59a8d2881b2290d175822b39ca65b Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1028825: python-igor: FTBFS: AttributeError: module 'numpy' has no attribute 'complex'
Control: affects -1 src:arpys Control: tags -1 patch A patch has been committed in git: https://salsa.debian.org/science-team/igor/-/commit/4f292cca1d326fea9162c4d857ad76b9328b23ab Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1027205: tpot: autopkgtest fail with numpy/1.24.1
Control: tags -1 patch A patch has been committed in git: https://salsa.debian.org/science-team/tpot/-/commit/b7989129ccecae0b9cff9a3fa5b863a0d551815e Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1027210: vedo: autopkgtest fail with numpy/1.24.1
Control: tags -1 patch A patch has been committed in git: https://salsa.debian.org/science-team/vedo/-/commit/38552518c68ac46d03de940c6b4ed88aa987962a Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1027217: python-pymbar: autopkgtest fail with numpy/1.24.1
Control: tags -1 patch A patch has been committed in git: https://salsa.debian.org/science-team/python-pymbar/-/commit/731962ad419521a78c753ef6010ef3bed9980663 Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1028874: mlpy: FTBFS: ImportError: cannot import name 'bool' from 'numpy' (/usr/lib/python3/dist-packages/numpy/__init__.py)
Control: tags -1 patch On Sat, 14 Jan 2023 13:41:32 +0100 Lucas Nussbaum wrote: > ImportError: cannot import name 'bool' from 'numpy' (/usr/lib/python3/dist-packages/numpy/__init__.py) This is fixed in git: https://salsa.debian.org/science-team/mlpy/-/commit/fc8df840c199ab13ff8a804020c4181449d83c81 Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1023520: sumo: FTBFS (setuptools missing --install-layout=deb)
Control: tags -1 patch
On 11/5/22 21:04, Bas Couwenberg wrote:
python3-setuptools no longer defaults to --install-layout=deb, sumo will need a
patch to add this to the generated setup.py.
The attached patch resolves this issue.
Kind Regards,
Bas
--
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diff -Nru sumo-1.12.0+dfsg1/debian/changelog sumo-1.12.0+dfsg1/debian/changelog
--- sumo-1.12.0+dfsg1/debian/changelog 2022-02-11 22:11:11.0 +
+++ sumo-1.12.0+dfsg1/debian/changelog 2022-11-11 13:28:30.0 +
@@ -1,3 +1,11 @@
+sumo (1.12.0+dfsg1-1.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload.
+ * Add patch to fix installation with setuptools 65.3.0.
+(closes: #1023520)
+
+ -- Bas Couwenberg Fri, 11 Nov 2022 13:28:30 +
+
sumo (1.12.0+dfsg1-1) unstable; urgency=medium
* [e174ad9] Fix typo
diff -Nru sumo-1.12.0+dfsg1/debian/patches/series
sumo-1.12.0+dfsg1/debian/patches/series
--- sumo-1.12.0+dfsg1/debian/patches/series 2022-02-11 22:11:11.0
+
+++ sumo-1.12.0+dfsg1/debian/patches/series 2022-11-11 13:27:39.0
+
@@ -1,3 +1,4 @@
50_python2-rm.patch
60_fix_tests.patch
10_fix_python2.patch
+setuptools.patch
diff -Nru sumo-1.12.0+dfsg1/debian/patches/setuptools.patch
sumo-1.12.0+dfsg1/debian/patches/setuptools.patch
--- sumo-1.12.0+dfsg1/debian/patches/setuptools.patch 1970-01-01
00:00:00.0 +
+++ sumo-1.12.0+dfsg1/debian/patches/setuptools.patch 2022-11-11
13:27:39.0 +
@@ -0,0 +1,47 @@
+Description: Fix installation with setuptools 65.3.0.
+Author: Bas Couwenberg
+Bug-Debian: https://bugs.debian.org/1023520
+Forwarded: not-needed
+
+Index: sumo-1.12.0+dfsg1/src/libsumo/CMakeLists.txt
+===
+--- sumo-1.12.0+dfsg1.orig/src/libsumo/CMakeLists.txt
sumo-1.12.0+dfsg1/src/libsumo/CMakeLists.txt
+@@ -187,7 +187,7 @@ if(SWIG_FOUND)
+ endif()
+ if (NOT ${SETUPTOOLS_MISSING})
+ install(
+-CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE}
${CMAKE_SOURCE_DIR}/tools/build/setup-libsumo.py clean --all install
--root=\$ENV{DESTDIR}/ --prefix=${CMAKE_INSTALL_PREFIX} --optimize=1)"
++CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE}
${CMAKE_SOURCE_DIR}/tools/build/setup-libsumo.py clean --all install
--install-layout=deb --root=\$ENV{DESTDIR}/ --prefix=${CMAKE_INSTALL_PREFIX}
--optimize=1)"
+ COMPONENT pylibsumo)
+ endif()
+ else()
+Index: sumo-1.12.0+dfsg1/src/libtraci/CMakeLists.txt
+===
+--- sumo-1.12.0+dfsg1.orig/src/libtraci/CMakeLists.txt
sumo-1.12.0+dfsg1/src/libtraci/CMakeLists.txt
+@@ -159,7 +159,7 @@ if(SWIG_FOUND)
+ endif()
+ if (NOT ${SETUPTOOLS_MISSING})
+ install(
+-CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE}
${CMAKE_SOURCE_DIR}/tools/build/setup-libtraci.py clean --all install
--root=\$ENV{DESTDIR}/ --prefix=${CMAKE_INSTALL_PREFIX} --optimize=1)"
++CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE}
${CMAKE_SOURCE_DIR}/tools/build/setup-libtraci.py clean --all install
--install-layout=deb --root=\$ENV{DESTDIR}/ --prefix=${CMAKE_INSTALL_PREFIX}
--optimize=1)"
+ COMPONENT pylibtraci)
+ endif()
+ else()
+Index: sumo-1.12.0+dfsg1/CMakeLists.txt
+===
+--- sumo-1.12.0+dfsg1.orig/CMakeLists.txt
sumo-1.12.0+dfsg1/CMakeLists.txt
+@@ -456,9 +456,9 @@ endif ()
+ install(EXPORT SUMOConfig DESTINATION ${DATA_PATH}cmake NAMESPACE SUMO::)
+
+ if (NOT ${SETUPTOOLS_MISSING})
+-install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE}
${CMAKE_SOURCE_DIR}/tools/build/setup-sumolib.py clean --all install
--root=\$ENV{DESTDIR}/ --prefix=${CMAKE_INSTALL_PREFIX} --optimize=1)"
++install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE}
${CMAKE_SOURCE_DIR}/tools/build/setup-sumolib.py clean --all install
--install-layout=deb --root=\$ENV{DESTDIR}/ --prefix=${CMAKE_INSTALL_PREFIX}
--optimize=1)"
+ COMPONENT pysumolib)
+-install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE}
${CMAKE_SOURCE_DIR}/tools/build/setup-traci.py clean --all install
--root=\$ENV{DESTDIR}/ --prefix=${CMAKE_INSTALL_PREFIX} --optimize=1)"
++install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE}
${CMAKE_SOURCE_DIR}/tools/build/setup-traci.py clean --all install
--install-layout=deb --root=\$ENV{DESTDIR}/ --prefix=${CMAKE_INSTALL_PREFIX}
--optimize=1)"
+ COMPONENT pytraci)
+ endif ()
+
--
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Bug#1013754: python-h5netcdf: FTBFS with NetCDF 4.9.0 (test failures)
Control: tags -1 fixed-upstream On 6/25/22 14:30, Bas Couwenberg wrote: The attached patch fixes the issue. Upstream has published a new release with a fix for this issue: " h5netcdf patch release 1.0.1 is available on PyPI now. " Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1012663: paraview: FTBFS in unstable (error: expected identifier or ‘(’ before numeric constant)
Control: tags -1 upstream patch Control: forwarded -1 https://gitlab.kitware.com/paraview/paraview/-/issues/21442 The attached patch resolves the issue by renaming the conflicting variable. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1Description: Fix FTBFS with NetCDF 4.9.0. Author: Bas Couwenberg Bug-Debian: https://bugs.debian.org/1012663 Forwarded: https://gitlab.kitware.com/paraview/paraview/-/issues/21442 --- a/VTK/ThirdParty/exodusII/vtkexodusII/src/ex_utils.c +++ b/VTK/ThirdParty/exodusII/vtkexodusII/src/ex_utils.c @@ -1770,11 +1770,11 @@ void ex__compress_variable(int exoid, in */ /* const int NC_SZIP_EC = 4; */ /* Selects entropy coding method for szip. */ -const int NC_SZIP_NN = 32; /* Selects nearest neighbor coding method for szip. */ +const int NC_SZIP_NN_ = 32; /* Selects nearest neighbor coding method for szip. */ /* Even and between 4 and 32; typical values are 8, 10, 16, 32 */ const int SZIP_PIXELS_PER_BLOCK = file->compression_level == 0 ? 32 : file->compression_level; -nc_def_var_szip(exoid, varid, NC_SZIP_NN, SZIP_PIXELS_PER_BLOCK); +nc_def_var_szip(exoid, varid, NC_SZIP_NN_, SZIP_PIXELS_PER_BLOCK); #else char errmsg[MAX_ERR_LENGTH]; snprintf(errmsg, MAX_ERR_LENGTH, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1012703: vtk9: FTBFS with NetCDF 4.9.0 (error: expected identifier or '(' before numeric constant)
Control: tags -1 upstream patch Control: forwarded -1 https://gitlab.kitware.com/vtk/vtk/-/issues/18576 The attached patch resolves the issue by renaming the conflicting variable. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1Description: Fix FTBFS with NetCDF 4.9.0. Author: Bas Couwenberg Bug-Debian: https://bugs.debian.org/1012703 Forwarded: https://gitlab.kitware.com/vtk/vtk/-/issues/18576 --- a/ThirdParty/exodusII/vtkexodusII/src/ex_utils.c +++ b/ThirdParty/exodusII/vtkexodusII/src/ex_utils.c @@ -1770,11 +1770,11 @@ void ex__compress_variable(int exoid, in */ /* const int NC_SZIP_EC = 4; */ /* Selects entropy coding method for szip. */ -const int NC_SZIP_NN = 32; /* Selects nearest neighbor coding method for szip. */ +const int NC_SZIP_NN_ = 32; /* Selects nearest neighbor coding method for szip. */ /* Even and between 4 and 32; typical values are 8, 10, 16, 32 */ const int SZIP_PIXELS_PER_BLOCK = file->compression_level == 0 ? 32 : file->compression_level; -nc_def_var_szip(exoid, varid, NC_SZIP_NN, SZIP_PIXELS_PER_BLOCK); +nc_def_var_szip(exoid, varid, NC_SZIP_NN_, SZIP_PIXELS_PER_BLOCK); #else char errmsg[MAX_ERR_LENGTH]; snprintf(errmsg, MAX_ERR_LENGTH, -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1012663: paraview: FTBFS in unstable (error: expected identifier or ‘(’ before numeric constant)
On 6/11/22 15:03, Bas Couwenberg wrote: /<>/VTK/ThirdParty/exodusII/vtkexodusII/src/ex_utils.c:1773:19: error: expected identifier or ‘(’ before numeric constant 1773 | const int NC_SZIP_NN = 32; /* Selects nearest neighbor coding method for szip. */ | ^~ netcdf (4.9.0-1) contains this change in include/netcdf.h since 4.8.1-1: +#define NC_SZIP_NN 32 /**< SZIP NN option mask. */ ParaView will need to be updated to build successfully with NetCDF 4.9.0. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1007131: facet-analyser: Don't depend on PDAL
On 3/11/22 19:09, Bas Couwenberg wrote: Your package build depends on PDAL, which is going to be removed. The attached patch fixes the issue by dropping the package from the build dependencies. paraview (5.10.1-1) dropped the pdal (build) dependencies, that should unblock the fix in facet-analyser. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#983299: vtk9: FTBFS with PROJ 8.0.0
Control: tags -1 fixed-upstream Patch is available upstream: https://gitlab.kitware.com/vtk/vtk/-/merge_requests/7731 Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#983299: vtk9: FTBFS with PROJ 8.0.0
Control: tags -1 patch
On 2/25/21 1:49 PM, Sebastiaan Couwenberg wrote:
> On 2/22/21 7:29 AM, Bas Couwenberg wrote:
>> It needs to be ported to use proj.h instead of proj_api.h which has been
>> removed.
>
> While upstream has added support for proj.h this may not be easy to get
> into the vtk9 Debian package.
>
> Like with vtk6 (#931943) & vtk7 (#931943) you may want to use the
> embedded copy.
As reported in the upstream issue, vtk9 FTBFS when using only proj.h
because it still uses proj_api.h features.
The package will need to build with the embedded copy like the other vtk
packages as long as upstream doesn't support PROJ 8.
Kind Regards,
Bas
--
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Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1
--- a/debian/control
+++ b/debian/control
@@ -46,7 +46,6 @@ Build-Depends: chrpath,
libosmesa6-dev,
libpng-dev,
libpq-dev,
- libproj-dev,
libsqlite3-dev,
libswscale-dev,
libtheora-dev,
@@ -108,7 +107,6 @@ Depends: ${misc:Depends},
libnetcdf-dev,
libpng-dev,
libpq-dev,
- libproj-dev,
libpython3-dev,
libswscale-dev,
libtheora-dev,
--- a/debian/copyright
+++ b/debian/copyright
@@ -11,7 +11,6 @@ Files-Excluded:
ThirdParty/hdf5/vtkhdf5
ThirdParty/jpeg/vtkjpeg
ThirdParty/jsoncpp/vtkjsoncpp
- ThirdParty/libproj/vtklibproj
ThirdParty/libxml2/vtklibxml2
ThirdParty/lz4/vtklz4
ThirdParty/lzma/vtklzma
--- a/debian/rules
+++ b/debian/rules
@@ -48,7 +48,6 @@ extra_flags += \
-DVTK_MODULE_USE_EXTERNAL_VTK_hdf5:BOOL=ON \
-DVTK_MODULE_USE_EXTERNAL_VTK_jpeg:BOOL=ON \
-DVTK_MODULE_USE_EXTERNAL_VTK_jsoncpp:BOOL=ON \
- -DVTK_MODULE_USE_EXTERNAL_VTK_libproj:BOOL=ON \
-DVTK_MODULE_USE_EXTERNAL_VTK_libxml2:BOOL=ON \
-DVTK_MODULE_USE_EXTERNAL_VTK_lz4:BOOL=ON \
-DVTK_MODULE_USE_EXTERNAL_VTK_lzma:BOOL:BOOL=ON \
--
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Bug#983299: vtk9: FTBFS with PROJ 8.0.0
On 2/22/21 7:29 AM, Bas Couwenberg wrote: > It needs to be ported to use proj.h instead of proj_api.h which has been > removed. While upstream has added support for proj.h this may not be easy to get into the vtk9 Debian package. Like with vtk6 (#931943) & vtk7 (#931943) you may want to use the embedded copy. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#966986: Most likely fixed in sphinx (2.4.3-5)
A smiliar issue was reported for mapproxy in #966979, which was not an issue in mapproxy but in sphinx, and fixed in sphinx (2.4.3-5). I have not tested the build of this package, but the dh_sphinxdoc issue is mostl likely fixed with sphinx (2.4.3-5) as well. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#960656: sdpb: FTBFS on mipsel
On Fri, 15 May 2020 10:10:19 +0200 Sebastian Ramacher wrote: > sdpb failed to build on mipsel while rebuilding for the tinyxml2 transition: > https://buildd.debian.org/status/fetch.php?pkg=sdpb=mipsel=1.0-3%2Bb5=1589492907=0 sdpb has been removed from mipsel (#960747) to unblock the transition. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#950743: satpy: autopkgtest failures
On 2/5/20 10:02 PM, Antonio Valentino wrote: > indeed the problem is related to xarray, but IMHO the problem is in the > latest version of the xarray package which seems to be broken. > The xarray.core subpackage (wihic is also used in xarray/__init__.py) > seems to be totally missing. > > I'm going to ressign to python-xarray. Sounds good, thanks for looking into this. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#932683: Bug#932679: python-gdal dropped from gdal (3.0.1+dfsg-1~exp3)
On 10/1/19 11:08 PM, Sandro Tosi wrote: > On Tue, Oct 1, 2019 at 1:21 PM Sebastiaan Couwenberg > wrote: >> >> On 8/30/19 10:20 AM, Sebastiaan Couwenberg wrote: >>> gdal (3.0.1+dfsg-1~exp3) dropped support for Python 2 and no longer >>> builds python-gdal. >> >> The next upload of GDAL 2.4.x will also drop support for Python 2 and no >> longer build python-gdal. Because I'm not willing to support python2 in my packages after 2020. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#932683: python-gdal dropped from gdal (3.0.1+dfsg-1~exp3)
On 8/30/19 10:20 AM, Sebastiaan Couwenberg wrote: > gdal (3.0.1+dfsg-1~exp3) dropped support for Python 2 and no longer > builds python-gdal. The next upload of GDAL 2.4.x will also drop support for Python 2 and no longer build python-gdal. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#932683: Bug#932679: python-gdal dropped from gdal (3.0.1+dfsg-1~exp3)
block 932679 by 932197 938330 938307 937262 937258 block 932679 by 937145 936503 936704 936285 thanks On 9/17/19 6:05 AM, Sandro Tosi wrote: > thanks for the heads up, but please note python-networkx has still > planty of reverse-dependencies, so we cannot drop that package yet. > please dont drop python-gdal from unstable until it has no rev-deps. I'm sorry, but I cannot wait for that. The python-gdal package won't be re-introduced for GDAL 3 in experimental. Once the gdal transition starts python-gdal will be gone from unstable, and the severity of these bugreports will be increased to serious. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#932683: python-gdal dropped from gdal (3.0.1+dfsg-1~exp3)
gdal (3.0.1+dfsg-1~exp3) dropped support for Python 2 and no longer builds python-gdal. Your package will break when the transition to gdal 3.x starts. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#931943: vtk6: FTBFS with PROJ 6
vtk6 is failing to build with the new proj in unstable as part of the transition. Please move the fixed packages from experimental to unstable. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#931940: FTBFS with PROJ 6
Control: severity -1 serious The proj transition has started, raising severity accordingly. Kind Regards, bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#874727: OSG changing VRML renderer away from coin3
On 11/5/18 12:45 AM, Manuel A. Fernandez Montecelo wrote: > 2018-11-04 18:28 Christoph Berg: >> Re: To markus 2018-10-05 <20181005080326.gb13...@msg.df7cb.de> >>> > it's a packaging bug - libcoin is statically linked with libexpat, and >>> > the version being used is outdated. So anything that uses libcoin and >>> > libexpat will run into a segfault. >>> > >>> > I am not aware of any other application that uses libcoin. >>> >>> I noticed because PostGIS is affected via postgis B-D -> libsfcgal-dev >>> -> libsfcgal-osg1 -> libopenscenegraph100v5 -> libcoin80v5. Looking at >>> https://udd.debian.org/cgi-bin/autoremovals.cgi there's quite a few >>> packages depending on coin3. So the question whether this affects >>> freecad only or more packages is making quite a difference. >> >> There is some indirect progress on this, Sebastiaan Couwenberg has >> submitted patches to change OSG's VRML renderer to SGI Inventor: >> >> | Patches for both OSG packages have been submitted to use SGI Inventor >> | instead of COIN: >> | >> | https://bugs.debian.org/912866 (openscenegraph) >> | https://bugs.debian.org/912867 (openscenegraph-3.4) > > I am not totally opposed to that, and thanks to Bas for the patches. > But it looks to me that the proper solution is something like what > Bernhard posted just minutes before this message that I am replying to > (that perhaps Christoph didn't notice, due to the timing): > > https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=874727#96 Yes, the proper solution is to fix coin3. The OSG patches are meant as an interim solution to remove the coin3 dependency from the OSG packages and remove the threat of testing autoremoval. OSG will also need to be patched to support the CMake builds of coin3, so more work is needed to get OSG to work with the fixed coin3. Kind Regards, Bas -- GPG Key ID: 4096R/6750F10AE88D4AF1 Fingerprint: 8182 DE41 7056 408D 6146 50D1 6750 F10A E88D 4AF1 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: netcdf4-python/1.4.0-1 breaks python-pydap/3.2.2+ds1-1 autopkgtest in testing
On 05/16/2018 08:43 PM, Paul Gevers wrote: > With a recent upload of netcdf4-python the autopkgtest of python-pydap > started to fail in testing [2]. This is currently delaying the migration > of netcdf4-python version 1.4.0-1 [3]. numpy is breaking many more packages, causing their testing migration to be delayed. None of the pydap tests seem related to the use of python-netcdf4. Kind Regards, Bas -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
