date:20160809

Your message dated Wed, 10 Aug 2016 04:29:44 +
with message-id 
and subject line Bug#833870: fixed in primesieve 5.7.0+ds-2
has caused the Debian Bug report #833870,
regarding libprimesieve7-dev-common: fails to upgrade from 'testing' - trying 
to overwrite /usr/include/primesieve/Callback.hpp
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
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Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libprimesieve7-dev-common
Version: 5.7.0+ds-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#s-replaces

>From the attached log (scroll to the bottom...):

  Selecting previously unselected package libprimesieve7-dev-common.
  Preparing to unpack .../libprimesieve7-dev-common_5.7.0+ds-1_all.deb ...
  Unpacking libprimesieve7-dev-common (5.7.0+ds-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libprimesieve7-dev-common_5.7.0+ds-1_all.deb (--unpack):
   trying to overwrite '/usr/include/primesieve/Callback.hpp', which is also in 
package libprimesieve6-dev-common 5.6.0+ds-2
  Errors were encountered while processing:
   /var/cache/apt/archives/libprimesieve7-dev-common_5.7.0+ds-1_all.deb


cheers,

Andreas


libprimesieve6-dev-common=5.6.0+ds-2_libprimesieve7-dev-common=5.7.0+ds-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: primesieve
Source-Version: 5.7.0+ds-2

We believe that the bug you reported is fixed in the latest version of
primesieve, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 833...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Jerome Benoit  (supplier of updated primesieve package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Format: 1.8
Date: Wed, 10 Aug 2016 00:58:23 +
Source: primesieve
Binary: primesieve libprimesieve7 libprimesieve7-dev libprimesieve7-dev-common 
primesieve-bin primesieve-doc
Architecture: source
Version: 5.7.0+ds-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Jerome Benoit 
Description:
 libprimesieve7 - fast prime number generator C/C++ library -- lib
 libprimesieve7-dev - fast prime number generator C/C++ library -- libdev
 libprimesieve7-dev-common - fast prime number generator C/C++ library -- 
headers
 primesieve - fast prime number generator C/C++ library
 primesieve-bin - fast prime number generator C/C++ library -- bin
 primesieve-doc - fast prime number generator C/C++ library -- doc
Closes: 833870
Changes:
 primesieve (5.7.0+ds-2) unstable; urgency=medium
 .
   * RC bug fix release (Closes: #833870), harden libdev transition.
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primesieve_5.7.0+ds-2_source.changes ACCEPTED into unstable



Accepted:

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Hash: SHA512

Format: 1.8
Date: Wed, 10 Aug 2016 00:58:23 +
Source: primesieve
Binary: primesieve libprimesieve7 libprimesieve7-dev libprimesieve7-dev-common 
primesieve-bin primesieve-doc
Architecture: source
Version: 5.7.0+ds-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Jerome Benoit 
Description:
 libprimesieve7 - fast prime number generator C/C++ library -- lib
 libprimesieve7-dev - fast prime number generator C/C++ library -- libdev
 libprimesieve7-dev-common - fast prime number generator C/C++ library -- 
headers
 primesieve - fast prime number generator C/C++ library
 primesieve-bin - fast prime number generator C/C++ library -- bin
 primesieve-doc - fast prime number generator C/C++ library -- doc
Closes: 833870
Changes:
 primesieve (5.7.0+ds-2) unstable; urgency=medium
 .
   * RC bug fix release (Closes: #833870), harden libdev transition.
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Dezaktywacja Przypominamy !!!

2016-08-09 Thread Admin

Drogi konto uzytkownika poczty elektronicznej,

   Konto e-mail zostal umieszczony na naszej czarnej liscie 
serwera SMTP z powodu nieregularnego ruchu z konta email OD.
Masz 12 godzin, aby zweryfikowac swoje konto e-mail konta, aby uniknac 
zawieszenia. i usuwanie wiadomosci przychodzacych


http://adminhelpdesksecureunit.moonfruit.com/


Pozdrowienia,
Administrator Help Desk.
Copyright © 2016 Wszelkie prawa zastrzezone.

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Processing of primesieve_5.7.0+ds-2_source.changes

primesieve_5.7.0+ds-2_source.changes uploaded successfully to localhost
along with the files:
  primesieve_5.7.0+ds-2.dsc
  primesieve_5.7.0+ds.orig.tar.xz
  primesieve_5.7.0+ds-2.debian.tar.xz

Greetings,

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Processing of primesieve_5.7.0+ds-2_source.changes

primesieve_5.7.0+ds-2_source.changes uploaded successfully to 
ftp-master.debian.org
along with the files:
  primesieve_5.7.0+ds-2.dsc
  primesieve_5.7.0+ds.orig.tar.xz
  primesieve_5.7.0+ds-2.debian.tar.xz

Greetings,

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Bug#817017: libopencv-highgui-dev: Should not depend on libgtk2.0-dev

2016-08-09 Thread Tim-Philipp Müller

Hello,

I was just going to file the same bug (against unstable, and not
because of any install problems).

I also believe libopencv-highgui-dev should not depend on libgtk2.0-
dev, since:

 - libgtk2.0 appears to only be used internally by libopencv_highgui 
 - gtk/gdk headers are not referenced in its public header files
 - no pkg-config file that references gtk/gdk .pc file

What is the reason for this dependency then ?

Cheers
-Tim

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getfem++_5.0+dfsg1-1_amd64.changes is NEW

binary:libgetfem5++ is NEW.

Your package has been put into the NEW queue, which requires manual action
from the ftpteam to process. The upload was otherwise valid (it had a good
OpenPGP signature and file hashes are valid), so please be patient.

Packages are routinely processed through to the archive, and do feel
free to browse the NEW queue[1].

If there is an issue with the upload, you will receive an email from a
member of the ftpteam.

If you have any questions, you may reply to this email.

[1]: https://ftp-master.debian.org/new.html

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Processing of getfem++_5.0+dfsg1-1_amd64.changes

getfem++_5.0+dfsg1-1_amd64.changes uploaded successfully to localhost
along with the files:
  getfem++_5.0+dfsg1-1.dsc
  getfem++_5.0+dfsg1.orig.tar.xz
  getfem++_5.0+dfsg1-1.debian.tar.xz
  libgetfem++-dev_5.0+dfsg1-1_amd64.deb
  libgetfem5++-dbgsym_5.0+dfsg1-1_amd64.deb
  libgetfem5++_5.0+dfsg1-1_amd64.deb
  libgmm++-dev_5.0+dfsg1-1_all.deb
  python-getfem++-dbgsym_5.0+dfsg1-1_amd64.deb
  python-getfem++_5.0+dfsg1-1_amd64.deb

Greetings,

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Bug#818817: Closing the bug #818817

2016-08-09 Thread Anton Gladky

notfound 818817 1.0+dfsg1-1
tag 818817 +unreproducible
thanks

Hi Martin,

I am not able to reproduce the bug in current sid
environment, where libc_2.23 is by default already.
Thus I am closing the bug.

Best regards

Anton

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Bug#818817: marked as done (woo: FTBFS with libc 2.23: 'isnan' was not declared in this scope)

Your message dated Tue, 9 Aug 2016 21:46:32 +0200
with message-id 

and subject line Closing the bug #818817
has caused the Debian Bug report #818817,
regarding woo: FTBFS with libc 2.23: 'isnan' was not declared in this scope
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
818817: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=818817
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: woo
Version: 1.0+dfsg1-1
Severity: important
User: debian-gl...@lists.debian.org
Usertags: 2.23

This package fails to build with libc6 2.23 (2.23-0experimental0 from
experimental).

> sbuild (Debian sbuild) 0.68.0 (15 Jan 2016) on dl580gen9-02.hlinux
...

> build-src-tree/woo/pkg/dem/Particle.hpp: In member function 'void 
> Shape::setBaseColor(Real)':
> build-src-tree/woo/pkg/dem/Particle.hpp:360:39: error: 'isnan' was not 
> declared in this scope
>   void setBaseColor(Real c){ if(isnan(c)) return; 
> color=trunc(color)+(color<0?-1:1)*CompUtils::clamped(c,0,1); }
>^
> build-src-tree/woo/pkg/dem/Particle.hpp:360:39: note: suggested alternatives:
> In file included from /usr/include/c++/5/random:38:0,
>  from /usr/include/c++/5/bits/stl_algo.h:66,
>  from /usr/include/c++/5/algorithm:62,
>  from /usr/include/boost/iterator/iterator_concepts.hpp:29,
>  from /usr/include/boost/range/concepts.hpp:20,
>  from /usr/include/boost/range/size_type.hpp:20,
>  from /usr/include/boost/range/size.hpp:21,
>  from /usr/include/boost/range/functions.hpp:20,
>  from /usr/include/boost/range/iterator_range_core.hpp:38,
>  from /usr/include/boost/lexical_cast.hpp:30,
>  from build-src-tree/woo/core/Dispatcher.hpp:11,
>  from build-src-tree/woo/pkg/dem/Collision.hpp:2,
>  from build-src-tree/woo/pkg/dem/InsertionSortCollider.hpp:4,
>  from build-src-tree/../pkg/dem/InsertionSortCollider.cpp:3,
>  from build-src-tree/src/chunk-65-InsertionSortCollider.cpp:1:
> /usr/include/c++/5/cmath:641:5: note:   'std::isnan'
>  isnan(_Tp __x)
>  ^
> In file included from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:35:0,
>  from 
> /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:64,
>  from 
> /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:53,
>  from 
> /usr/include/boost/lexical_cast/try_lexical_convert.hpp:34,
>  from /usr/include/boost/lexical_cast.hpp:32,
>  from build-src-tree/woo/core/Dispatcher.hpp:11,
>  from build-src-tree/woo/pkg/dem/Collision.hpp:2,
>  from build-src-tree/woo/pkg/dem/InsertionSortCollider.hpp:4,
>  from build-src-tree/../pkg/dem/InsertionSortCollider.cpp:3,
>  from build-src-tree/src/chunk-65-InsertionSortCollider.cpp:1:
> /usr/include/boost/math/special_functions/fpclassify.hpp:579:14: note:   
> 'boost::math::isnan'
>  inline bool (isnan)(T x)
>   ^
> In file included from /usr/include/eigen3/Eigen/Core:441:0,
>  from build-src-tree/woo/lib/base/Math.hpp:55,
>  from build-src-tree/woo/core/Master.hpp:16,
>  from build-src-tree/woo/core/Dispatcher.hpp:13,
>  from build-src-tree/woo/pkg/dem/Collision.hpp:2,
>  from build-src-tree/woo/pkg/dem/InsertionSortCollider.hpp:4,
>  from build-src-tree/../pkg/dem/InsertionSortCollider.cpp:3,
>  from build-src-tree/src/chunk-65-InsertionSortCollider.cpp:1:
> /usr/include/eigen3/Eigen/src/Core/GlobalFunctions.h:67:36: note:   
> 'Eigen::isnan'
>EIGEN_ARRAY_DECLARE_GLOBAL_UNARY(isnan,scalar_isnan_op)
> ^
> /usr/include/eigen3/Eigen/src/Core/GlobalFunctions.h:17:4: note: in 
> definition of macro 'EIGEN_ARRAY_DECLARE_GLOBAL_UNARY'
>(NAME)(const Eigen::ArrayBase& x) { \
> ^
> In file included from /usr/include/eigen3/Eigen/Core:302:0,
>  from build-src-tree/woo/lib/base/Math.hpp:55,
>  from build-src-tree/woo/core/Master.hpp:16,
>  from build-src-tree/woo/core/Dispatcher.hpp:13,
>  from build-src-tree/woo/pkg/dem/Collision.hpp:2,
>  from build-src-tree/woo/pkg/dem/InsertionSortCollider.hpp:4,
>

Processed: Closing the bug #818817

Processing commands for cont...@bugs.debian.org:

> notfound 818817 1.0+dfsg1-1
Bug #818817 [woo] woo: FTBFS with libc 2.23: 'isnan' was not declared in this 
scope
There is no source info for the package 'woo' at version '1.0+dfsg1-1' with 
architecture ''
Unable to make a source version for version '1.0+dfsg1-1'
No longer marked as found in versions 1.0+dfsg1-1.
> tag 818817 +unreproducible
Bug #818817 [woo] woo: FTBFS with libc 2.23: 'isnan' was not declared in this 
scope
Added tag(s) unreproducible.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Bug#833383: ros-std-msgs: split headers and message definitions

2016-08-09 Thread Jochen Sprickerhof

Hi Daniele,

* Daniele E. Domenichelli  [2016-08-09 20:03]:
> I suppose this should be done to all the ros-*-msgs packages, right?

Yes :).

> I already have a patch for ros-std-msgs, you can find it here:
> 
> https://github.com/drdanz/ros-std-msgs/commit/41dcc24cd3a654e612a33e16e5442bf276d861fe

I've added some comments.

> (I'm not sure if this is the right way to send a patch, I hope the link
> to github is ok, please forgive me if it is not and let me know how I
> should send it)

I would propose to attach the patch to this bug (by mail), so we can
discuss the details. If you want, you can register to alioth.debian.org
and request membership to the debian-science group, so you get direct
commit access to our repos.

Cheers Jochen


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Bug#833383: ros-std-msgs: split headers and message definitions

2016-08-09 Thread Daniele E. Domenichelli


Hello Jochen,

On 2016-08-05 10:28, Jochen Sprickerhof wrote:

So we move everything in /usr/share/std_msgs, right?

Package: ros-std-msgs
Section: devel

Something like that?


Sounds good to me.



Would you be interested in working on it?


Yes, I can work on it.
I suppose this should be done to all the ros-*-msgs packages, right?

I already have a patch for ros-std-msgs, you can find it here:

  
https://github.com/drdanz/ros-std-msgs/commit/41dcc24cd3a654e612a33e16e5442bf276d861fe


(I'm not sure if this is the right way to send a patch, I hope the link
to github is ok, please forgive me if it is not and let me know how I
should send it)


Cheers,
 Daniele

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Bug#833870: libprimesieve7-dev-common: fails to upgrade from 'testing' - trying to overwrite /usr/include/primesieve/Callback.hpp

2016-08-09 Thread Jerome BENOIT

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Hi Andreas, thanks for your report.

On 09/08/16 17:50, Andreas Beckmann wrote:
> Package: libprimesieve7-dev-common
> Version: 5.7.0+ds-1
> Severity: serious
> User: debian...@lists.debian.org
> Usertags: piuparts
> 
> Hi,
> 
> during a test with piuparts I noticed your package fails to upgrade from
> 'testing'.
> It installed fine in 'testing', then the upgrade to 'sid' fails
> because it tries to overwrite other packages files without declaring a
> Breaks+Replaces relation.
> 
> See policy 7.6 at
> https://www.debian.org/doc/debian-policy/ch-relationships.html#s-replaces
> 
>>From the attached log (scroll to the bottom...):
> 
>   Selecting previously unselected package libprimesieve7-dev-common.
>   Preparing to unpack .../libprimesieve7-dev-common_5.7.0+ds-1_all.deb ...
>   Unpacking libprimesieve7-dev-common (5.7.0+ds-1) ...
>   dpkg: error processing archive 
> /var/cache/apt/archives/libprimesieve7-dev-common_5.7.0+ds-1_all.deb 
> (--unpack):
>trying to overwrite '/usr/include/primesieve/Callback.hpp', which is also 
> in package libprimesieve6-dev-common 5.6.0+ds-2
>   Errors were encountered while processing:
>/var/cache/apt/archives/libprimesieve7-dev-common_5.7.0+ds-1_all.deb
> 
> 
> cheers,
> 
> Andreas
> 
> 
> 

- -- 
Jerome BENOIT, Ph.D. | jgmbenoit-at+rezozer*dot_net
http://www.rezozer.net/

- -- 
Jerome BENOIT | calculus+at-rezozer^dot*net
https://qa.debian.org/developer.php?login=calcu...@rezozer.net
AE28 AE15 710D FF1D 87E5  A762 3F92 19A6 7F36 C68B
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Bug#833870: libprimesieve7-dev-common: fails to upgrade from 'testing' - trying to overwrite /usr/include/primesieve/Callback.hpp

2016-08-09 Thread Andreas Beckmann

Package: libprimesieve7-dev-common
Version: 5.7.0+ds-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#s-replaces

>From the attached log (scroll to the bottom...):

  Selecting previously unselected package libprimesieve7-dev-common.
  Preparing to unpack .../libprimesieve7-dev-common_5.7.0+ds-1_all.deb ...
  Unpacking libprimesieve7-dev-common (5.7.0+ds-1) ...
  dpkg: error processing archive 
/var/cache/apt/archives/libprimesieve7-dev-common_5.7.0+ds-1_all.deb (--unpack):
   trying to overwrite '/usr/include/primesieve/Callback.hpp', which is also in 
package libprimesieve6-dev-common 5.6.0+ds-2
  Errors were encountered while processing:
   /var/cache/apt/archives/libprimesieve7-dev-common_5.7.0+ds-1_all.deb


cheers,

Andreas


libprimesieve6-dev-common=5.6.0+ds-2_libprimesieve7-dev-common=5.7.0+ds-1.log.gz
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Bug#833846: marked as done (fflas-ffpack: don't generate optimised code based on the build machine)

Your message dated Tue, 09 Aug 2016 16:21:21 +
with message-id 
and subject line Bug#833846: fixed in fflas-ffpack 2.2.1-2
has caused the Debian Bug report #833846,
regarding fflas-ffpack: don't generate optimised code based on the build machine
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
833846: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=833846
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: fflas-ffpack
Version: 2.2.1-1
Severity: important

Dear Maintainer,

fflas-ffpack on amd64 was built with "-msse4.1 -mfma -mavx2" as can be seen
from the output of `pkg-config --cflags fflas-ffpack`. This unfortunately makes
it crash on amd64 machines that don't support these instructions, and we are
running into this issue whilst testing SageMath.

Please disable any build options that set optimisations based on autodetection
of the CPU features of the build machine.

It should be OK to hard-code "-mmmx -msse -msse2" for amd64 and "-msse -msse2"
for i386, according to wRAR on #debian-devel. This is somewhat based on
information from [1]. There might be other optimisations you can make, but I
haven't yet done the detailed research for that.

X

[1] https://lists.debian.org/debian-devel-announce/2016/05/msg1.html

-- System Information:
Debian Release: stretch/sid
  APT prefers testing
  APT policy: (990, 'testing'), (500, 'stable'), (300, 'unstable'), (200, 
'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.6.0-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_GB.utf8, LC_CTYPE=en_GB.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages fflas-ffpack depends on:
ii  fflas-ffpack-common  2.2.1-1

fflas-ffpack recommends no packages.

Versions of packages fflas-ffpack suggests:
pn  fflas-ffpack-dev-doc   
pn  fflas-ffpack-user-doc  

-- no debconf information
--- End Message ---
--- Begin Message ---
Source: fflas-ffpack
Source-Version: 2.2.1-2

We believe that the bug you reported is fixed in the latest version of
fflas-ffpack, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 833...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Doug Torrance  (supplier of updated fflas-ffpack 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 09 Aug 2016 08:47:36 -0400
Source: fflas-ffpack
Binary: fflas-ffpack fflas-ffpack-common fflas-ffpack-user-doc 
fflas-ffpack-dev-doc
Architecture: source all amd64
Version: 2.2.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Doug Torrance 
Description:
 fflas-ffpack - Finite field linear algebra subroutines/package
 fflas-ffpack-common - Finite field linear algebra subroutines/package - common 
files
 fflas-ffpack-dev-doc - FFLAS-FFPACK Developer Documentation
 fflas-ffpack-user-doc - FFLAS-FFPACK User Documentation
Closes: 833846
Changes:
 fflas-ffpack (2.2.1-2) unstable; urgency=medium
 .
   * debian/rules
 - Disable processor extensions. May be present at build but not runtime
   (Closes: #833846).
Checksums-Sha1:
 d0311aa9971b14d72d7f10e9974a02df3e371099 2538 fflas-ffpack_2.2.1-2.dsc
 b0dfc02dd56a66ebedafa216bd7df837a831a36d 4940 
fflas-ffpack_2.2.1-2.debian.tar.xz
 c823789ccfa08dd3bffd4f21b40f527263f1cc9b 172076 
fflas-ffpack-common_2.2.1-2_all.deb
 5e58fc4437ef5cbe3c932e5f1da12d9498719ca4 417492 
fflas-ffpack-dev-doc_2.2.1-2_all.deb
 c17d17ed3e137af4579d93d882d66c6a6078f2af 115078 
fflas-ffpack-user-doc_2.2.1-2_all.deb
 3dbe9ebe282321144189f6272c588186b833d90b 10884 fflas-ffpack_2.2.1-2_amd64.deb
Checksums-Sha256:
 648ab47250d6395e2be0ee07f6472a22b127f5c1533ed04598573458e2f21f23 2538 
fflas-ffpack_2.2.1-2.dsc
 ed2d1bbbd4e4866606ba9b14589836bd18ebce07627ff58ac5fab46f717935d0 4940 
fflas-ffpack_2.2.1-2.debian.tar.xz
 b7333df8005ae3b2f38a84da8c7161d694d6202a018000ccef8eef71f151f65d 172076 
fflas-ffpack-common_2.2.1-2_all.deb

libgetdata_0.9.3-2_amd64.changes is NEW

Mapping sid to unstable.
binary:python3-pygetdata is NEW.

Your package has been put into the NEW queue, which requires manual action
from the ftpteam to process. The upload was otherwise valid (it had a good
OpenPGP signature and file hashes are valid), so please be patient.

Packages are routinely processed through to the archive, and do feel
free to browse the NEW queue[1].

If there is an issue with the upload, you will receive an email from a
member of the ftpteam.

If you have any questions, you may reply to this email.

[1]: https://ftp-master.debian.org/new.html

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fflas-ffpack_2.2.1-2_amd64.changes ACCEPTED into unstable



Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 09 Aug 2016 08:47:36 -0400
Source: fflas-ffpack
Binary: fflas-ffpack fflas-ffpack-common fflas-ffpack-user-doc 
fflas-ffpack-dev-doc
Architecture: source all amd64
Version: 2.2.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Doug Torrance 
Description:
 fflas-ffpack - Finite field linear algebra subroutines/package
 fflas-ffpack-common - Finite field linear algebra subroutines/package - common 
files
 fflas-ffpack-dev-doc - FFLAS-FFPACK Developer Documentation
 fflas-ffpack-user-doc - FFLAS-FFPACK User Documentation
Closes: 833846
Changes:
 fflas-ffpack (2.2.1-2) unstable; urgency=medium
 .
   * debian/rules
 - Disable processor extensions. May be present at build but not runtime
   (Closes: #833846).
Checksums-Sha1:
 d0311aa9971b14d72d7f10e9974a02df3e371099 2538 fflas-ffpack_2.2.1-2.dsc
 b0dfc02dd56a66ebedafa216bd7df837a831a36d 4940 
fflas-ffpack_2.2.1-2.debian.tar.xz
 c823789ccfa08dd3bffd4f21b40f527263f1cc9b 172076 
fflas-ffpack-common_2.2.1-2_all.deb
 5e58fc4437ef5cbe3c932e5f1da12d9498719ca4 417492 
fflas-ffpack-dev-doc_2.2.1-2_all.deb
 c17d17ed3e137af4579d93d882d66c6a6078f2af 115078 
fflas-ffpack-user-doc_2.2.1-2_all.deb
 3dbe9ebe282321144189f6272c588186b833d90b 10884 fflas-ffpack_2.2.1-2_amd64.deb
Checksums-Sha256:
 648ab47250d6395e2be0ee07f6472a22b127f5c1533ed04598573458e2f21f23 2538 
fflas-ffpack_2.2.1-2.dsc
 ed2d1bbbd4e4866606ba9b14589836bd18ebce07627ff58ac5fab46f717935d0 4940 
fflas-ffpack_2.2.1-2.debian.tar.xz
 b7333df8005ae3b2f38a84da8c7161d694d6202a018000ccef8eef71f151f65d 172076 
fflas-ffpack-common_2.2.1-2_all.deb
 6b40e47dc394e7bc3992bfd53215e2adef658a9318c95b017b29187e51fe7db4 417492 
fflas-ffpack-dev-doc_2.2.1-2_all.deb
 abc792eba16ba46e3b100d9f877fbb4f9ff51cf0f5300dc2ef03121c706e1eb0 115078 
fflas-ffpack-user-doc_2.2.1-2_all.deb
 8dc1791c106856efb8e7345a650e3a0c323c77b19f3013528593c84bc16805d4 10884 
fflas-ffpack_2.2.1-2_amd64.deb
Files:
 0271c76772060fc2d077ed2a551418ff 2538 math optional fflas-ffpack_2.2.1-2.dsc
 ebf0015170f42a4c49f20ff71bec0f1e 4940 math optional 
fflas-ffpack_2.2.1-2.debian.tar.xz
 aa1208840cc7ec2badb987bbee9778a0 172076 math optional 
fflas-ffpack-common_2.2.1-2_all.deb
 0647db586a5f37f1a8674ad819417ee9 417492 doc optional 
fflas-ffpack-dev-doc_2.2.1-2_all.deb
 35a969714e5badbdf3d47ffa305139be 115078 doc optional 
fflas-ffpack-user-doc_2.2.1-2_all.deb
 9e96091f09b4a088e792a92674d668e9 10884 math optional 
fflas-ffpack_2.2.1-2_amd64.deb

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Processing of libgetdata_0.9.3-2_amd64.changes

libgetdata_0.9.3-2_amd64.changes uploaded successfully to localhost
along with the files:
  libgetdata_0.9.3-2.dsc
  libgetdata_0.9.3-2.debian.tar.xz
  libf95getdata6-dbgsym_0.9.3-2_amd64.deb
  libf95getdata6_0.9.3-2_amd64.deb
  libfgetdata5-dbgsym_0.9.3-2_amd64.deb
  libfgetdata5_0.9.3-2_amd64.deb
  libgetdata++6-dbgsym_0.9.3-2_amd64.deb
  libgetdata++6_0.9.3-2_amd64.deb
  libgetdata-dev_0.9.3-2_amd64.deb
  libgetdata-doc_0.9.3-2_all.deb
  libgetdata-perl-dbgsym_0.9.3-2_amd64.deb
  libgetdata-perl_0.9.3-2_amd64.deb
  libgetdata-tools-dbgsym_0.9.3-2_amd64.deb
  libgetdata-tools_0.9.3-2_amd64.deb
  libgetdata7-dbgsym_0.9.3-2_amd64.deb
  libgetdata7_0.9.3-2_amd64.deb
  python-pygetdata-dbgsym_0.9.3-2_amd64.deb
  python-pygetdata_0.9.3-2_amd64.deb
  python3-pygetdata-dbgsym_0.9.3-2_amd64.deb
  python3-pygetdata_0.9.3-2_amd64.deb

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Processing of fflas-ffpack_2.2.1-2_amd64.changes

fflas-ffpack_2.2.1-2_amd64.changes uploaded successfully to localhost
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  fflas-ffpack_2.2.1-2.dsc
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  fflas-ffpack-dev-doc_2.2.1-2_all.deb
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Bug#833846: fflas-ffpack: don't generate optimised code based on the build machine

2016-08-09 Thread Doug Torrance

Control: tags -1 pending

On 08/09/2016 07:53 AM, Ximin Luo wrote:

Control: severity -1 serious

I was recommended by multiple people to bump the severity of this bug. Also to clarify that i386
should have no optimisation flags, and not "-msse -msse2". My earlier comment was based
on a misunderstanding of what "i386 doesn't have mmx" meant; sse and sse2 build on top of
mmx.

Ximin Luo:

Package: fflas-ffpack
Version: 2.2.1-1
Severity: important

Dear Maintainer,

fflas-ffpack on amd64 was built with "-msse4.1 -mfma -mavx2" as can be seen
from the output of `pkg-config --cflags fflas-ffpack`. This unfortunately makes
it crash on amd64 machines that don't support these instructions, and we are
running into this issue whilst testing SageMath.

Please disable any build options that set optimisations based on autodetection
of the CPU features of the build machine.

It should be OK to hard-code "-mmmx -msse -msse2" for amd64 and "-msse -msse2"
for i386, according to wRAR on #debian-devel. This is somewhat based on
information from [1]. There might be other optimisations you can make, but I
haven't yet done the detailed research for that.

[1] https://lists.debian.org/debian-devel-announce/2016/05/msg1.html

Thanks for your report! I had figured that there was an issue like
this, as both the CI and reproducible build tasks have been failing.

I've disabled the use of these extensions and a new version is in git
[1] awaiting sponsorship.

Doug

[1]
https://anonscm.debian.org/cgit/debian-science/packages/fflas-ffpack.git/commit/?id=88c339f745dc54351d4c437eedd38a5b83dca993

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Processed: Re: Bug#833846: fflas-ffpack: don't generate optimised code based on the build machine

Processing control commands:

> tags -1 pending
Bug #833846 [fflas-ffpack] fflas-ffpack: don't generate optimised code based on 
the build machine
Added tag(s) pending.

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Processed: severity of 833846 is serious

Processing commands for cont...@bugs.debian.org:

> severity 833846 serious
Bug #833846 [fflas-ffpack] fflas-ffpack: don't generate optimised code based on 
the build machine
Ignoring request to change severity of Bug 833846 to the same value.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Processed: Re: fflas-ffpack: don't generate optimised code based on the build machine

Processing control commands:

> severity -1 serious
Bug #833846 [fflas-ffpack] fflas-ffpack: don't generate optimised code based on 
the build machine
Severity set to 'serious' from 'important'

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Bug#833846: fflas-ffpack: don't generate optimised code based on the build machine

2016-08-09 Thread Ximin Luo

Control: severity -1 serious

I was recommended by multiple people to bump the severity of this bug. Also to 
clarify that i386 should have no optimisation flags, and not "-msse -msse2". My 
earlier comment was based on a misunderstanding of what "i386 doesn't have mmx" 
meant; sse and sse2 build on top of mmx.

X

Ximin Luo:
> Package: fflas-ffpack
> Version: 2.2.1-1
> Severity: important
> 
> Dear Maintainer,
> 
> fflas-ffpack on amd64 was built with "-msse4.1 -mfma -mavx2" as can be seen
> from the output of `pkg-config --cflags fflas-ffpack`. This unfortunately 
> makes
> it crash on amd64 machines that don't support these instructions, and we are
> running into this issue whilst testing SageMath.
> 
> Please disable any build options that set optimisations based on autodetection
> of the CPU features of the build machine.
> 
> It should be OK to hard-code "-mmmx -msse -msse2" for amd64 and "-msse -msse2"
> for i386, according to wRAR on #debian-devel. This is somewhat based on
> information from [1]. There might be other optimisations you can make, but I
> haven't yet done the detailed research for that.
> 
> X
> 
> [1] https://lists.debian.org/debian-devel-announce/2016/05/msg1.html
> 
> -- System Information:
> Debian Release: stretch/sid
>   APT prefers testing
>   APT policy: (990, 'testing'), (500, 'stable'), (300, 'unstable'), (200, 
> 'experimental')
> Architecture: amd64 (x86_64)
> Foreign Architectures: i386
> 
> Kernel: Linux 4.6.0-1-amd64 (SMP w/4 CPU cores)
> Locale: LANG=en_GB.utf8, LC_CTYPE=en_GB.utf8 (charmap=UTF-8)
> Shell: /bin/sh linked to /bin/dash
> Init: systemd (via /run/systemd/system)
> 
> Versions of packages fflas-ffpack depends on:
> ii  fflas-ffpack-common  2.2.1-1
> 
> fflas-ffpack recommends no packages.
> 
> Versions of packages fflas-ffpack suggests:
> pn  fflas-ffpack-dev-doc   
> pn  fflas-ffpack-user-doc  
> 
> -- no debconf information
> 


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Bug#833846: fflas-ffpack: don't generate optimised code based on the build machine

2016-08-09 Thread Ximin Luo

Package: fflas-ffpack
Version: 2.2.1-1
Severity: important

Dear Maintainer,

fflas-ffpack on amd64 was built with "-msse4.1 -mfma -mavx2" as can be seen
from the output of `pkg-config --cflags fflas-ffpack`. This unfortunately makes
it crash on amd64 machines that don't support these instructions, and we are
running into this issue whilst testing SageMath.

Please disable any build options that set optimisations based on autodetection
of the CPU features of the build machine.

It should be OK to hard-code "-mmmx -msse -msse2" for amd64 and "-msse -msse2"
for i386, according to wRAR on #debian-devel. This is somewhat based on
information from [1]. There might be other optimisations you can make, but I
haven't yet done the detailed research for that.

X

[1] https://lists.debian.org/debian-devel-announce/2016/05/msg1.html

-- System Information:
Debian Release: stretch/sid
  APT prefers testing
  APT policy: (990, 'testing'), (500, 'stable'), (300, 'unstable'), (200, 
'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.6.0-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_GB.utf8, LC_CTYPE=en_GB.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages fflas-ffpack depends on:
ii  fflas-ffpack-common  2.2.1-1

fflas-ffpack recommends no packages.

Versions of packages fflas-ffpack suggests:
pn  fflas-ffpack-dev-doc   
pn  fflas-ffpack-user-doc  

-- no debconf information

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Processed: Re: Bug#831442: mpich: Broken /usr/lib/libmpich.so.12 symlink, depending on installation order

Processing control commands:

> severity -1 normal
Bug #831442 [src:mpich] mpich: Broken /usr/lib/libmpich.so.12 symlink, 
depending on installation order
Severity set to 'normal' from 'serious'

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Bug#831442: mpich: Broken /usr/lib/libmpich.so.12 symlink, depending on installation order

2016-08-09 Thread Thibaut Paumard

Control: severity -1 normal

Dear all,

I have been able to work around this bug in yorick by adding a file
debian/shlibs.local in the source tree with this single line:

libmpich 12 libmpich12

Le 08/08/2016 12:12, Thibaut Paumard a écrit :
> Hi have open a new bug against libc-bin (ldconfig) to follow that up on
> that side: 833728

The libc-bin maintainers think that the proper fix would be to also
convert openmpi to multiarch and move the alternative main link also to
the multiarch directory.

I'm downgrading the severity since a workaround exists to avoid FTBFS.

Kind regards, Thibaut.

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Bug#831406: marked as done (yorick: FTBFS: dpkg-shlibdeps: error: no dependency information found for /usr/lib/libmpich.so.12 (used by debian/yorick-mpy-mpich2/usr/lib/yorick/bin/mpy.mpich2))

Your message dated Tue, 09 Aug 2016 06:33:57 +
with message-id 
and subject line Bug#831406: fixed in yorick 2.2.04+dfsg1-6
has caused the Debian Bug report #831406,
regarding yorick: FTBFS: dpkg-shlibdeps: error: no dependency information found 
for /usr/lib/libmpich.so.12 (used by 
debian/yorick-mpy-mpich2/usr/lib/yorick/bin/mpy.mpich2)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


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--- Begin Message ---
Source: yorick
Version: 2.2.04+dfsg1-5
Severity: serious
Justification: fails to build from source
User: reproducible-bui...@lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org

Dear Maintainer,

yorick fails to build from source in unstable/amd64:

  [..]

  "manual/yorick_prt.html"
  mkdir -p ../../build/doc/images
  cp -p images/*.* ../../build/doc//images/
  mkdir -p ../../build/doc/
  cp skull.css style.css ../../build/doc/
  make[1]: Leaving directory 
'/home/lamby/temp/cdt.20160715182504.pdcokDfkyE.yorick/yorick-2.2.04+dfsg1/doc/html'
  cp doc/html/packinfo.txt build/00yorick.packinfo
  cp doc/html/keywords.txt build/00yorick.keywords
  cp doc/html/aliases.txt build/00yorick.aliases
  find build/doc/manual -name "*.html" -not -name yorick_prt.html | xargs sed 
-e 's|^http://dhmunro.github.io/yorick-doc/;>Web HomeGetting StartedManualPackagesQuick 
Reference|' -e 's||&|' -i
  sed 's|yorick_1.html|index.html|' -i build/doc/*.html build/doc/*/*.html
  touch build-indep-stamp
   fakeroot debian/rules binary
  dh_testdir
  xvfb-run relocate/bin/yorick -batch testfull.i
   Begin Yorick parser test...
   Test 17x10x10 binary operators...
   Test unary operators...
   Test array manipulation functions...
   Test struct instancing and indexing...
   Test range functions...
   Test math functions...
   Test informational functions...
   Test func declarations...
   Test binary I/O functions...
   Test binary I/O to netCDF...
   Test ASCII I/O functions...
   Test string manipulation functions...
   Test list functions...
   Test catch function...
  End of Yorick parser test, 0 goofs
   begin string manipulation test...
  end string manipulation test, 0 goofs
   PASSED oxy test1
   PASSED oxy test2
   PASSED oxy test3
   PASSED closure called with no arguments
   PASSED all closure tests
   PASSED alternate closure tests
   PASSED oxy friend test
   PASSED oxy sibling test
   
   Zeroth test is pdtest files:
   Testing sun_primitives db1 write...
   Testing dec_primitives db1 write...
   Testing cray_primitives db1 write...
   Testing mac_primitives db1 write...
   Testing macl_primitives db1 write...
   Testing pc_primitives db1 write...
   Testing sun3_primitives db1 write...
   Testing vax_primitives db1 write...
   Testing vaxg_primitives db1 write...
   Testing xdr_primitives db1 write...
   Testing sun_primitives db1 write w/PDB-style pointers...
   Testing dec_primitives db1 write w/PDB-style pointers...
   Testing cray_primitives db1 write w/PDB-style pointers...
   Testing native db1 write...
   
 First test is to write flat files:
   Write using native formats
   Write using DEC primitive formats
   Write using Sun primitive formats
   Write using Cray primitive formats
   
Second test is to write files with pointers:
   Write using native formats
   Write using DEC primitive formats
   Write using Sun primitive formats
   Write using Cray primitive formats
   
Third test is to update pointered files with flat data:
   Update using native formats
   Update using DEC primitive formats
   Update using Sun primitive formats
   Update using Cray primitive formats
   
Fourth test is exhaustive check of other primitive formats:
   Testing Sun format
   Testing i86 format
   Testing alpha format
   Testing sgi64 format
   Testing DEC format
   Testing Cray format
   Testing XDR format
   Testing Mac format
   Testing Mac long-double format
   Testing IBM PC format
   Testing VAX format
   Testing VAX G-double format
   Testing Sun-3/Sun-2 format
   Testing native format
 Timing Category CPU sec  System secWall sec
  Time to write/test all formats   0.004   0.000   0.007
   
Fifth test is check of Contents Log machinery:
   Contents Log -- testing Sun format
   Contents Log -- testing DEC format
   Contents Log -- testing Cray format
   Contents Log -- testing VAX format
   Contents Log -- testing native format
   Non-PDB Contents Log -- testing Sun

yorick_2.2.04+dfsg1-6_source.changes ACCEPTED into unstable



Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 09 Aug 2016 06:01:28 +0200
Source: yorick
Binary: yorick yorick-dbg yorick-data yorick-dev yorick-mpy-mpich2 
yorick-mpy-openmpi yorick-mpy-common yorick-doc yorick-full
Architecture: source
Version: 2.2.04+dfsg1-6
Distribution: unstable
Urgency: low
Maintainer: Debian Science Maintainers 

Changed-By: Thibaut Paumard 
Description:
 yorick - interpreted language and scientific graphics
 yorick-data - interpreted library for the Yorick language
 yorick-dbg - debugging symbols for Yorick
 yorick-dev - development files for the Yorick interpreted language
 yorick-doc - documentation for the Yorick interpreted language
 yorick-full - full installation of the Yorick interpreter and add-ons
 yorick-mpy-common - Message Passing Yorick (common files)
 yorick-mpy-mpich2 - Message Passing Yorick (MPICH2 build)
 yorick-mpy-openmpi - Message Passing Yorick (OpenMPI build)
Closes: 831406
Changes:
 yorick (2.2.04+dfsg1-6) unstable; urgency=low
 .
   * Bug fix: "FTBFS: dpkg-shlibdeps: error: no dependency information
 found for /usr/lib/libmpich.so.12 (used by
 debian/yorick-mpy-mpich2/usr/lib/yorick/bin/mpy.mpich2)", thanks to
 Chris Lamb (Closes: #831406): introduce debian/shlibs.local.
   * Check against policy 3.9.8.
Checksums-Sha1:
 68273ede01f8790129005033ef9177a8ba9ffdec 3189 yorick_2.2.04+dfsg1-6.dsc
 bd63acf465ba55ae9d583f5339eebc774c6f3909 40740 
yorick_2.2.04+dfsg1-6.debian.tar.xz
Checksums-Sha256:
 2497fe76975678a543542509e378dd04837c3ff1c17a5c2067aaf425d019dc2a 3189 
yorick_2.2.04+dfsg1-6.dsc
 28fd4e3e5b5871fdcb0cae0304918de509e184c6e6e041b784a05be5182d2133 40740 
yorick_2.2.04+dfsg1-6.debian.tar.xz
Files:
 e9628574434d854242cf4b58d36bc72f 3189 science extra yorick_2.2.04+dfsg1-6.dsc
 95c2ad5ea751f46a4c19d93bba52c8f3 40740 science extra 
yorick_2.2.04+dfsg1-6.debian.tar.xz

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