3depict is marked for autoremoval from testing

[Debian testing autoremoval watch]

3depict 0.0.19-1 is marked for autoremoval from testing on 2016-10-17

It (build-)depends on packages with these RC bugs:
835680: mathgl: FTBFS: complex_io.cpp:32:18: fatal error: hdf5.h: No such file 
or directory


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spyder_3.0.0+dfsg1-1~exp1_i386.changes REJECTED

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spyder3: lintian output: 'non-standard-toplevel-dir share/', automatically 
rejected package.
spyder3: If you have a good reason, you may override this lintian tag.
spyder: lintian output: 'non-standard-toplevel-dir share/', automatically 
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spyder: If you have a good reason, you may override this lintian tag.

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Processing of spyder_3.0.0+dfsg1-1~exp1_i386.changes

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spyder_3.0.0+dfsg1-1~exp1_i386.changes uploaded successfully to localhost
along with the files:
  spyder_3.0.0+dfsg1-1~exp1.dsc
  spyder_3.0.0+dfsg1.orig.tar.gz
  spyder_3.0.0+dfsg1-1~exp1.debian.tar.xz
  python-spyder_3.0.0+dfsg1-1~exp1_all.deb
  python-spyderlib-doc_3.0.0+dfsg1-1~exp1_all.deb
  python-spyderlib_3.0.0+dfsg1-1~exp1_all.deb
  python3-spyder_3.0.0+dfsg1-1~exp1_all.deb
  python3-spyderlib_3.0.0+dfsg1-1~exp1_all.deb
  spyder-common_3.0.0+dfsg1-1~exp1_all.deb
  spyder-doc_3.0.0+dfsg1-1~exp1_all.deb
  spyder3_3.0.0+dfsg1-1~exp1_all.deb
  spyder_3.0.0+dfsg1-1~exp1_all.deb

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esys-particle 2.3.4+dfsg1-3 MIGRATED to testing

[Debian testing watch]

FYI: The status of the esys-particle source package
in Debian's testing distribution has changed.

  Previous version: (not in testing)
  Current version:  2.3.4+dfsg1-3

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hkl 5.0.0.2173-1 MIGRATED to testing

[Debian testing watch]

FYI: The status of the hkl source package
in Debian's testing distribution has changed.

  Previous version: 5.0.0.2080-1
  Current version:  5.0.0.2173-1

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Bug#837914: esys-particle: FTBFS due to test failures

[Anton Gladky]

Thanks Michael for the discovery! I temporarily disabled
compile-time tests, but it seems the package is fully functional.

Will try to retarget build-tests.

Best regards

Anton


2016-09-25 13:17 GMT+02:00 Michael Banck :
> Hi,
>
> as I just diagnosed this for a different package: the problem appears to
> be that mpirun is run during binary-arch, i.e. under fakeroot. Latest
> openmpi does not like that apparenlty and crashes.
>
> So the tests should be run as part of the build-arch or build-indep
> targets.
>
>
> Michael
>
> --
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Bug#837914: esys-particle: FTBFS due to test failures

[Michael Banck]

Hi,

as I just diagnosed this for a different package: the problem appears to
be that mpirun is run during binary-arch, i.e. under fakeroot. Latest
openmpi does not like that apparenlty and crashes.

So the tests should be run as part of the build-arch or build-indep
targets.


Michael

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Bug#836677: marked as done (FTBFS: superlu patch needs updating for superlu 5.2)

[Debian Bug Tracking System]

Your message dated Sun, 25 Sep 2016 07:58:01 +
with message-id 
and subject line Bug#836677: fixed in pysparse 1.1.1-1
has caused the Debian Bug report #836677,
regarding FTBFS: superlu patch needs updating for superlu 5.2
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
836677: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=836677
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: pysparse
Version: 1.1-1.3
Severity: important

superlu 5.2 is currently in experimental but will soon be released to
unstable.

pysparse FTBFS against libsuperlu-dev 5.2, with the error:

  In file included from Src/superlu3module.c:12:0:
  /usr/include/superlu/slu_ddefs.h:151:16: note: expected ‘SuperLUStat_t * {aka 
struct  *}’ but argument is of type ‘int *’
   extern voiddgstrf (superlu_options_t*, SuperMatrix*,
  ^~
  Src/superlu3module.c:270:3: error: too few arguments to function ‘dgstrf’
 dgstrf(>options, , relax, panel_size,
 ^~


Curiously, debian/patches/superlu-4.3.patch is the one that removes an
argument to dgstrf.

I don't know what's going on between superlu 4.3 and 5.2 with respect
to dgstrf, but if superlu-4.3.patch is not applied, then the build
of pysparse against superlu 5.2 does complete successfully.

The bug is no more severe than "important" while superlu 5.2 is in
experimental, but will become serious once it is released to unstable.


-- System Information:
Debian Release: stretch/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.7.0-1-amd64 (SMP w/8 CPU cores)
Locale: LANG=en_AU.utf8, LC_CTYPE=en_AU.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
--- End Message ---
--- Begin Message ---
Source: pysparse
Source-Version: 1.1.1-1

We believe that the bug you reported is fixed in the latest version of
pysparse, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 836...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ghislain Antony Vaillant  (supplier of updated pysparse 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA1

Format: 1.8
Date: Fri, 23 Sep 2016 14:45:44 +0100
Source: pysparse
Binary: python-sparse python-sparse-examples
Architecture: source
Version: 1.1.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ghislain Antony Vaillant 
Description:
 python-sparse - Sparse linear algebra extension for Python
 python-sparse-examples - Sparse linear algebra extension for Python: 
documentation
Closes: 836677
Changes:
 pysparse (1.1.1-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream version 1.1.1
   * Update patch queue.
 - Drop no-g2c.patch, applied upstream.
 - Refresh suitesparse-4.1.patch.
 - Drop superlu-4.3.patch, no longer applicable.
   * Add patch fixing FTBFS with SuperLU v5.x.
 Thanks to Drew Parsons for reporting (Closes: #836677)
   * Use pybuild.
   * Use dh-python.
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pysparse_1.1.1-1_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA1

Format: 1.8
Date: Fri, 23 Sep 2016 14:45:44 +0100
Source: pysparse
Binary: python-sparse python-sparse-examples
Architecture: source
Version: 1.1.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ghislain Antony Vaillant 
Description:
 python-sparse - Sparse linear algebra extension for Python
 python-sparse-examples - Sparse linear algebra extension for Python: 
documentation
Closes: 836677
Changes:
 pysparse (1.1.1-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream version 1.1.1
   * Update patch queue.
 - Drop no-g2c.patch, applied upstream.
 - Refresh suitesparse-4.1.patch.
 - Drop superlu-4.3.patch, no longer applicable.
   * Add patch fixing FTBFS with SuperLU v5.x.
 Thanks to Drew Parsons for reporting (Closes: #836677)
   * Use pybuild.
   * Use dh-python.
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Thank you for your contribution to Debian.

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Processing of pysparse_1.1.1-1_source.changes

[Debian FTP Masters]

pysparse_1.1.1-1_source.changes uploaded successfully to ftp-master.debian.org
along with the files:
  pysparse_1.1.1-1.dsc
  pysparse_1.1.1.orig.tar.gz
  pysparse_1.1.1-1.debian.tar.xz

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