Bug#859579: python-cvxopt-doc: fails to upgrade from 'sid' - trying to overwrite /usr/share/doc-base/cvxopt

2017-04-04 Thread Andreas Beckmann
Package: python-cvxopt-doc
Version: 1.1.8+dfsg-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'sid' to 'experimental'.
It installed fine in 'sid', then the upgrade to 'experimental' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
https://www.debian.org/doc/debian-policy/ch-relationships.html#s-replaces

>From the attached log (scroll to the bottom...):

  Selecting previously unselected package python-cvxopt-doc.
  Preparing to unpack .../10-python-cvxopt-doc_1.1.8+dfsg-1_all.deb ...
  Unpacking python-cvxopt-doc (1.1.8+dfsg-1) ...
  dpkg: error processing archive 
/tmp/apt-dpkg-install-zhgQWq/10-python-cvxopt-doc_1.1.8+dfsg-1_all.deb 
(--unpack):
   trying to overwrite '/usr/share/doc-base/cvxopt', which is also in package 
python-cvxopt 1.1.4-1.5
  Errors were encountered while processing:
   /tmp/apt-dpkg-install-zhgQWq/10-python-cvxopt-doc_1.1.8+dfsg-1_all.deb


cheers,

Andreas


python-cvxopt=1.1.4-1.5_python-cvxopt-doc=1.1.8+dfsg-1.log.gz
Description: application/gzip
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Bug#859080: marked as done (spyder-memory-profiler: FTBFS: AttributeError: 'NoneType' object has no attribute 'toUtf8')

2017-04-04 Thread Debian Bug Tracking System
Your message dated Tue, 04 Apr 2017 19:34:31 +
with message-id 
and subject line Bug#859080: fixed in spyder 3.1.3+dfsg1-3
has caused the Debian Bug report #859080,
regarding spyder-memory-profiler: FTBFS: AttributeError: 'NoneType' object has 
no attribute 'toUtf8'
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
859080: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=859080
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: spyder-memory-profiler
Version: 0.1.0-1
Severity: serious
Justification: fails to build from source
User: reproducible-bui...@lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org

Dear Maintainer,

spyder-memory-profiler fails to build from source in unstable/amd64:

  […]

  = test session starts 
==
  platform linux -- Python 3.5.3, pytest-3.0.6, py-1.4.32, pluggy-0.4.0
  PyQt5 5.7 -- Qt runtime 5.7.1 -- Qt compiled 5.7.1
  rootdir: «BUILDDIR», inifile: 
  plugins: xvfb-1.0.0, qt-2.1.0
  collected 0 items / 1 errors
  
   ERRORS 

   ERROR collecting 
.pybuild/pythonX.Y_3.5/build/spyder_memory_profiler/widgets/tests/test_memoryprofiler.py
 
  /usr/lib/python3/dist-packages/py/_path/local.py:662: in pyimport
  __import__(modname)
  spyder_memory_profiler/__init__.py:12: in 
  from .memoryprofiler import MemoryProfiler
  spyder_memory_profiler/memoryprofiler.py:14: in 
  from spyder.utils.qthelpers import qapplication
  /usr/lib/python3/dist-packages/spyder/utils/qthelpers.py:26: in 
  from spyder.config.gui import get_shortcut
  /usr/lib/python3/dist-packages/spyder/config/gui.py:26: in 
  from spyder.config.main import CONF
  /usr/lib/python3/dist-packages/spyder/config/main.py:22: in 
  from spyder.config.user import UserConfig
  /usr/lib/python3/dist-packages/spyder/config/user.py:26: in 
  from spyder.utils.programs import check_version
  /usr/lib/python3/dist-packages/spyder/utils/programs.py:33: in 
  username = encoding.to_unicode_from_fs(os.environ.get('USER'))
  /usr/lib/python3/dist-packages/spyder/utils/encoding.py:65: in 
to_unicode_from_fs
  string = to_text_string(string.toUtf8(), 'utf-8')
  E   AttributeError: 'NoneType' object has no attribute 'toUtf8'
  !!! Interrupted: 1 errors during collection 

  === 1 error in 0.32 seconds 

  E: pybuild pybuild:283: test: plugin distutils failed with: exit code=2: cd 
«BUILDDIR»/.pybuild/pythonX.Y_3.5/build; python3.5 -m pytest 
  dh_auto_test: pybuild --test --test-pytest -i python{version} -p 3.5 returned 
exit code 13
  debian/rules:12: recipe for target 'build' failed
  make: *** [build] Error 25
  dpkg-buildpackage: error: debian/rules build gave error exit status 2

  […]

The full build log is attached.


Regards,

-- 
  ,''`.
 : :'  : Chris Lamb
 `. `'`  la...@debian.org / chris-lamb.co.uk
   `-


spyder-memory-profiler.0.1.0-1.unstable.amd64.log.txt.gz
Description: Binary data
--- End Message ---
--- Begin Message ---
Source: spyder
Source-Version: 3.1.3+dfsg1-3

We believe that the bug you reported is fixed in the latest version of
spyder, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 859...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ghislain Antony Vaillant  (supplier of updated spyder 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 04 Apr 2017 12:05:55 +0100
Source: spyder
Binary: spyder python-spyderlib python-spyder python-spyderlib-doc spyder-doc 
spyder3 python3-spyderlib python3-spyder spyder-common
Architecture: source
Version: 3.1.3+dfsg1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ghislain Antony Vaillant 
Description:
 python-spyder - Python IDE for scientists (Python 2 modules)
 python-spyderlib - transitional dummy package for python-spyder
 python-spyderlib-doc - transitional dummy package for spyder-doc
 p

Bug#837915: marked as done (aster: FTBFS due to install failures)

2017-04-04 Thread Debian Bug Tracking System
Your message dated Tue, 04 Apr 2017 19:36:08 +
with message-id 
and subject line Bug#859406: Removed package(s) from unstable
has caused the Debian Bug report #837915,
regarding aster: FTBFS due to install failures
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
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Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: aster
Version: 11.5.0+dfsg2-4
Severity: serious
Justification: makes the package in question unusable or mostly so
Control: block 836917 by -1

Dear Maintainer,

The upload of openmpi (2.0.1-3) to unstable has triggered an
uncoordinated transition (#836917). Unfortunately your package FTBFS due
to install failures:

 stdout: 
--
 It looks like orte_init failed for some reason; your parallel process is
 likely to abort.  There are many reasons that a parallel process can
 fail during orte_init; some of which are due to configuration or
 environment problems.  This failure appears to be an internal failure;
 here's some additional information (which may only be relevant to an
 Open MPI developer):
 
   init pmix failed
   --> Returned value Unreachable (-12) instead of ORTE_SUCCESS
 --
 --
 It looks like orte_init failed for some reason; your parallel process is
 likely to abort.  There are many reasons that a parallel process can
 fail during orte_init; some of which are due to configuration or
 environment problems.  This failure appears to be an internal failure;
 here's some additional information (which may only be relevant to an
 Open MPI developer):
 
   orte_ess_init failed
   --> Returned value Unreachable (-12) instead of ORTE_SUCCESS
 --
 --
 It looks like MPI_INIT failed for some reason; your parallel process is
 likely to abort.  There are many reasons that a parallel process can
 fail during MPI_INIT; some of which are due to configuration or environment
 problems.  This failure appears to be an internal failure; here's some
 additional information (which may only be relevant to an Open MPI
 developer):
 
   ompi_mpi_init: ompi_rte_init failed
   --> Returned "Unreachable" (-12) instead of "Success" (0)
 --
 
 stderr: [babin:16923] PMIX ERROR: UNREACHABLE in file src/client/pmix_client.c 
at line 983
 [babin:16924] PMIX ERROR: INVALID-CREDENTIAL in file 
src/server/pmix_server_listener.c at line 540
 [babin:16923] PMIX ERROR: UNREACHABLE in file src/client/pmix_client.c at line 
199
 *** An error occurred in MPI_Init
 *** on a NULL communicator
 *** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
 ***and potentially your MPI job)
 [babin:16923] Local abort before MPI_INIT completed completed successfully, 
but am not able to aggregate error messages, and not able to guarantee that all 
other processes were killed!
 
 To run manually, set:
 BINDIR="/«BUILDDIR»/aster-11.5.0+dfsg2/debian/tmp/usr/bin"
 PYTHONDIR="/usr/lib/python2.7/dist-packages"
 and copy/paste the command line below:
 Command 
'LD_LIBRARY_PATH="/«BUILDDIR»/aster-11.5.0+dfsg2/debian/tmp/usr/lib:/usr/lib/x86_64-linux-gnu/libfakeroot:/usr/lib64/libfakeroot:/usr/lib32/libfakeroot"
 ${BINDIR}/aster 
/«BUILDDIR»/aster-11.5.0+dfsg2/debian/tmp/usr/lib/aster/Execution/E_SUPERV.py 
-commandes /«BUILDDIR»/aster-11.5.0+dfsg2/build/release/fort.1 -memjeveux 500 
-tpmax 120 --bibpyt /«BUILDDIR»/aster-11.5.0+dfsg2/debian/tmp/usr/lib/aster' 
returned 1
 debian/rules:45: recipe for target 'override_dh_auto_install' failed

Kind Regards,

Bas
--- End Message ---
--- Begin Message ---
Version: 11.5.0+dfsg2-4+rm

Dear submitter,

as the package aster has just been removed from the Debian archive
unstable we hereby close the associated bug reports.  We are sorry
that we couldn't deal with your issue properly.

For details on the removal, please see https://bugs.debian.org/859406

The version of this package that was in Debian prior to this removal
can still be found using http://snapshot.debian.org/.

This message was generated automatically; if you believe that there is
a problem with it please contact the archive administrators by mailing
ftpmas...@ftp-master.debian.org.

Debian distribution maintena

Bug#775225: marked as done (code-aster-mpi-engine: Segmentation fault code: Address not mapped)

2017-04-04 Thread Debian Bug Tracking System
Your message dated Tue, 04 Apr 2017 19:36:08 +
with message-id 
and subject line Bug#859406: Removed package(s) from unstable
has caused the Debian Bug report #775225,
regarding code-aster-mpi-engine: Segmentation fault code: Address not mapped
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
775225: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=775225
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: code-aster-mpi-engine
Version: 11.5.0+dfsg2-3+b1
Severity: grave
Justification: renders package unusable

Dear Maintainer,

I did the following

1. cp /usr/share/aster/tests/sdll108b.* ./

2. edit the sdll108b.export file as follows
P actions make_etude
P memory_limit 512
P mode interactif
P mpi_nbcpu 1
P mpi_nbnoeud 1
P ncpus 1
P rep_trav /scratch/fairlead-fairlead17-interactif.7092/
P testlist R
P time_limit 60
P version 12.1
A memjeveux 64.0
A tpmax 900
F comm sdll108b.comm D  1
F mmed sdll108b.mmed D  20

as_run sdll108b.export

Code aster gave a sgementaion fault


 Code_Aster run

 Command line 1 :
 ./aster Python/Execution/E_SUPERV.py -eficas_path ./Python -commandes 
fort.1  -num_job 20207 -mode interactif -rep_outils /usr/lib/codeaster/outils 
-rep_mat /usr/lib/codeaster/STABLE/materiau -rep_dex 
/usr/lib/codeaster/STABLE/datg -suivi_batch -memjeveux 64.0 -tpmax 900
[fairlead17:20250] *** Process received signal ***
[fairlead17:20250] Signal: Segmentation fault (11)
[fairlead17:20250] Signal code: Address not mapped (1)
[fairlead17:20250] Failing at address: 0xed7
[fairlead17:20250] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0xf8d0) 
[0x7f9eda0d38d0]
[fairlead17:20250] [ 1] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x55b8eb) 
[0x7f9ed4ece8eb]
[fairlead17:20250] [ 2] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x58cb23) 
[0x7f9ed4effb23]
[fairlead17:20250] [ 3] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x5de103) 
[0x7f9ed4f51103]
[fairlead17:20250] [ 4] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x5de14f) 
[0x7f9ed4f5114f]
[fairlead17:20250] [ 5] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x5e155a) 
[0x7f9ed4f5455a]
[fairlead17:20250] [ 6] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x4f89f6) 
[0x7f9ed4e6b9f6]
[fairlead17:20250] [ 7] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x4f97cb) 
[0x7f9ed4e6c7cb]
[fairlead17:20250] [ 8] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x4f9ad6) 
[0x7f9ed4e6cad6]
[fairlead17:20250] [ 9] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x4a6824) 
[0x7f9ed4e19824]
[fairlead17:20250] [10] /usr/lib/x86_64-linux-gnu/libamdocl64.so(+0x4c726e) 
[0x7f9ed4e3a26e]
[fairlead17:20250] [11] 
/usr/lib/x86_64-linux-gnu/libamdocl64.so(clIcdGetPlatformIDsKHR+0x93) 
[0x7f9ed4e02d73]
[fairlead17:20250] [12] /usr/lib/x86_64-linux-gnu/libOpenCL.so.1(+0x4341) 
[0x7f9ed76aa341]
[fairlead17:20250] [13] /lib64/ld-linux-x86-64.so.2(+0xe9fa) [0x7f9edb33c9fa]
[fairlead17:20250] [14] /lib64/ld-linux-x86-64.so.2(+0xeae3) [0x7f9edb33cae3]
[fairlead17:20250] [15] /lib64/ld-linux-x86-64.so.2(+0x12c48) [0x7f9edb340c48]
[fairlead17:20250] [16] /lib64/ld-linux-x86-64.so.2(+0xe8b4) [0x7f9edb33c8b4]
[fairlead17:20250] [17] /lib64/ld-linux-x86-64.so.2(+0x1243b) [0x7f9edb34043b]
[fairlead17:20250] [18] /lib/x86_64-linux-gnu/libdl.so.2(+0x102b) 
[0x7f9ed9b1802b]
[fairlead17:20250] [19] /lib64/ld-linux-x86-64.so.2(+0xe8b4) [0x7f9edb33c8b4]
[fairlead17:20250] [20] /lib/x86_64-linux-gnu/libdl.so.2(+0x15dd) 
[0x7f9ed9b185dd]
[fairlead17:20250] [21] /lib/x86_64-linux-gnu/libdl.so.2(dlopen+0x31) 
[0x7f9ed9b180c1]
[fairlead17:20250] [22] /usr/lib/x86_64-linux-gnu/libltdl.so.7(+0x68a2) 
[0x7f9eda2e78a2]
[fairlead17:20250] [23] /usr/lib/x86_64-linux-gnu/libltdl.so.7(+0x31e0) 
[0x7f9eda2e41e0]
[fairlead17:20250] [24] /usr/lib/x86_64-linux-gnu/libltdl.so.7(+0x4e73) 
[0x7f9eda2e5e73]
[fairlead17:20250] [25] 
/usr/lib/x86_64-linux-gnu/libltdl.so.7(lt_dlopenadvise+0x138) [0x7f9eda2e68e8]
[fairlead17:20250] [26] 
/usr/lib/x86_64-linux-gnu/libltdl.so.7(lt_dlopenext+0x40) [0x7f9eda2e69c0]
[fairlead17:20250] [27] /usr/lib/x86_64-linux-gnu/libhwloc.so.5(+0x1417b) 
[0x7f9eda4ff17b]
[fairlead17:20250] [28] /usr/lib/x86_64-linux-gnu/libltdl.so.7(+0x3dfb) 
[0x7f9eda2e4dfb]
[fairlead17:20250] [29] /usr/lib/x86_64-linux-gnu/libltdl.so.7(+0x3831) 
[0x7f9eda2e4831]
[fairlead17:20250] *** End of error message ***
Segmentation fault (core dumped)
EXIT_COMMAND_20207_0018=139
 Code_Aster run ended, diagnostic : _ABNORMAL_ABORT

_CORE_FILE  Code_Aster run created a coredump

 core file name : core

---

Bug#687385: marked as done (code-aster-engine: FTBFS on architectures where openmpi is not the default mpi implementation)

2017-04-04 Thread Debian Bug Tracking System
Your message dated Tue, 04 Apr 2017 19:36:08 +
with message-id 
and subject line Bug#859406: Removed package(s) from unstable
has caused the Debian Bug report #687385,
regarding code-aster-engine: FTBFS on architectures where openmpi is not the 
default mpi implementation
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
687385: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=687385
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: code-aster-engine
Version: 10.6.0-1-4
Severity: normal

code-aster packages FTBFS on architectures where openmpi is not
the default implementation; the error is

/build/buildd-aster_10.6.0-1-4-s390-ZzgFHf/aster-10.6.0-1/debian/tmp/usr/lib/codeaster/STA10.6_mpi/bibf90/debug/dbgmpi.F:73.64:

CALL MPI_ERRHANDLER_SET(MPI_COMM_WORLD,MPI_ERRORS_RETURN,IERMPI)
1
Error: Symbol 'mpi_errors_return' at (1) has no IMPLICIT type

-- System Information:
Debian Release: wheezy/sid
  APT prefers testing
  APT policy: (900, 'testing'), (500, 'unstable')
Architecture: amd64 (x86_64)

Kernel: Linux 3.2.0-2-amd64 (SMP w/2 CPU cores)
Locale: LANG=it_IT.UTF-8, LC_CTYPE=it_IT.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages code-aster-engine depends on:
ii  libatlas3gf-base [liblapack.so.3gf]  3.8.3-27
ii  libblas3gf [libblas.so.3gf]  1.2.20110419-2
ii  libc62.13-27
ii  libgcc1  1:4.7.0-1
ii  libgfortran3 4.7.0-1
ii  libgomp1 4.7.0-1
ii  libhdf5-openmpi-71.8.8-9
ii  liblapack3gf [liblapack.so.3gf]  3.3.1-1
ii  libmed1  3.0.3-3
ii  libmumps-seq-4.10.0  4.10.0.dfsg-3
ii  libpython2.6 2.6.7-4
ii  libpython2.7 2.7.2-8
ii  libquadmath0 4.7.0-1
ii  libscotch-5.15.1.12b.dfsg-1
ii  libstdc++6   4.7.0-1
ii  omniidl  4.1.6-2
ii  zlib1g   1:1.2.6.dfsg-2

code-aster-engine recommends no packages.

Versions of packages code-aster-engine suggests:
ii  eficas 2.0.3-1-1
ii  gmsh   2.5.1~beta2~svn11845~dfsg-2
ii  grace  
ii  metis-edf  4.1-2-2

-- no debconf information
--- End Message ---
--- Begin Message ---
Version: 11.5.0+dfsg2-4+rm

Dear submitter,

as the package aster has just been removed from the Debian archive
unstable we hereby close the associated bug reports.  We are sorry
that we couldn't deal with your issue properly.

For details on the removal, please see https://bugs.debian.org/859406

The version of this package that was in Debian prior to this removal
can still be found using http://snapshot.debian.org/.

This message was generated automatically; if you believe that there is
a problem with it please contact the archive administrators by mailing
ftpmas...@ftp-master.debian.org.

Debian distribution maintenance software
pp.
Chris Lamb (the ftpmaster behind the curtain)--- End Message ---
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http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers

Bug#687383: marked as done (code-aster-engine: CA can't read MED files on 64bit architectures)

2017-04-04 Thread Debian Bug Tracking System
Your message dated Tue, 04 Apr 2017 19:36:08 +
with message-id 
and subject line Bug#859406: Removed package(s) from unstable
has caused the Debian Bug report #687383,
regarding code-aster-engine: CA can't read MED files on 64bit architectures
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
687383: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=687383
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: code-aster-engine
Version: 10.6.0-1-4
Severity: important

On 64bit architecture CA can't read MED files; this is due somewhat
to the int default size, but I haven't an exact clue of where is
the problem.

-- System Information:
Debian Release: wheezy/sid
  APT prefers testing
  APT policy: (900, 'testing'), (500, 'unstable')
Architecture: amd64 (x86_64)

Kernel: Linux 3.2.0-2-amd64 (SMP w/2 CPU cores)
Locale: LANG=it_IT.UTF-8, LC_CTYPE=it_IT.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages code-aster-engine depends on:
ii  libatlas3gf-base [liblapack.so.3gf]  3.8.3-27
ii  libblas3gf [libblas.so.3gf]  1.2.20110419-2
ii  libc62.13-27
ii  libgcc1  1:4.7.0-1
ii  libgfortran3 4.7.0-1
ii  libgomp1 4.7.0-1
ii  libhdf5-openmpi-71.8.8-9
ii  liblapack3gf [liblapack.so.3gf]  3.3.1-1
ii  libmed1  3.0.3-3
ii  libmumps-seq-4.10.0  4.10.0.dfsg-3
ii  libpython2.6 2.6.7-4
ii  libpython2.7 2.7.2-8
ii  libquadmath0 4.7.0-1
ii  libscotch-5.15.1.12b.dfsg-1
ii  libstdc++6   4.7.0-1
ii  omniidl  4.1.6-2
ii  zlib1g   1:1.2.6.dfsg-2

code-aster-engine recommends no packages.

Versions of packages code-aster-engine suggests:
ii  eficas 2.0.3-1-1
ii  gmsh   2.5.1~beta2~svn11845~dfsg-2
ii  grace  
ii  metis-edf  4.1-2-2

-- no debconf information
--- End Message ---
--- Begin Message ---
Version: 11.5.0+dfsg2-4+rm

Dear submitter,

as the package aster has just been removed from the Debian archive
unstable we hereby close the associated bug reports.  We are sorry
that we couldn't deal with your issue properly.

For details on the removal, please see https://bugs.debian.org/859406

The version of this package that was in Debian prior to this removal
can still be found using http://snapshot.debian.org/.

This message was generated automatically; if you believe that there is
a problem with it please contact the archive administrators by mailing
ftpmas...@ftp-master.debian.org.

Debian distribution maintenance software
pp.
Chris Lamb (the ftpmaster behind the curtain)--- End Message ---
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Bug#859406: Removed package(s) from unstable

2017-04-04 Thread Debian FTP Masters
Version: 11.5.0+dfsg2-4+rm

Dear submitter,

as the package aster has just been removed from the Debian archive
unstable we hereby close the associated bug reports.  We are sorry
that we couldn't deal with your issue properly.

For details on the removal, please see https://bugs.debian.org/859406

The version of this package that was in Debian prior to this removal
can still be found using http://snapshot.debian.org/.

This message was generated automatically; if you believe that there is
a problem with it please contact the archive administrators by mailing
ftpmas...@ftp-master.debian.org.

Debian distribution maintenance software
pp.
Chris Lamb (the ftpmaster behind the curtain)

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Bug#859406: Removed package(s) from unstable

2017-04-04 Thread Debian FTP Masters
We believe that the bug you reported is now fixed; the following
package(s) have been removed from unstable:

 aster | 11.5.0+dfsg2-4 | source
code-aster | 11.5.0+dfsg2-4+b3 | amd64, armel, armhf, i386, mips, mipsel, 
powerpc
code-aster-mpi-engine | 11.5.0+dfsg2-4+b3 | amd64, armel, armhf, i386, mips, 
mipsel, powerpc
code-aster-test | 11.5.0+dfsg2-4 | all

--- Reason ---
ROM; unmaintained, FTBFS
--

Note that the package(s) have simply been removed from the tag
database and may (or may not) still be in the pool; this is not a bug.
The package(s) will be physically removed automatically when no suite
references them (and in the case of source, when no binary references
it).  Please also remember that the changes have been done on the
master archive and will not propagate to any mirrors until the next
dinstall run at the earliest.

Packages are usually not removed from testing by hand. Testing tracks
unstable and will automatically remove packages which were removed
from unstable when removing them from testing causes no dependency
problems. The release team can force a removal from testing if it is
really needed, please contact them if this should be the case.

We try to close bugs which have been reported against this package
automatically. But please check all old bugs, if they were closed
correctly or should have been re-assigned to another package.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 859...@bugs.debian.org.

The full log for this bug can be viewed at https://bugs.debian.org/859406

This message was generated automatically; if you believe that there is
a problem with it please contact the archive administrators by mailing
ftpmas...@ftp-master.debian.org.

Debian distribution maintenance software
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spyder_3.1.3+dfsg1-3_source.changes ACCEPTED into unstable

2017-04-04 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 04 Apr 2017 12:05:55 +0100
Source: spyder
Binary: spyder python-spyderlib python-spyder python-spyderlib-doc spyder-doc 
spyder3 python3-spyderlib python3-spyder spyder-common
Architecture: source
Version: 3.1.3+dfsg1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ghislain Antony Vaillant 
Description:
 python-spyder - Python IDE for scientists (Python 2 modules)
 python-spyderlib - transitional dummy package for python-spyder
 python-spyderlib-doc - transitional dummy package for spyder-doc
 python3-spyder - Python IDE for scientists (Python 3 modules)
 python3-spyderlib - transitional dummy package for python3-spyder
 spyder - Python IDE for scientists (Python 2)
 spyder-common - Python IDE for scientists (common files)
 spyder-doc - Python IDE for scientists (Documentation)
 spyder3- Python IDE for scientists (Python 3)
Closes: 859080
Changes:
 spyder (3.1.3+dfsg1-3) unstable; urgency=medium
 .
   * Cherry-pick upstream fix for overreliance on the USER envvar.
 New patch More-robust-username-query.patch
 Thanks to Chris Lamb for reporting (Closes: #859080)
   * Release to unstable
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Thank you for your contribution to Debian.

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Processing of spyder_3.1.3+dfsg1-3_source.changes

2017-04-04 Thread Debian FTP Masters
spyder_3.1.3+dfsg1-3_source.changes uploaded successfully to localhost
along with the files:
  spyder_3.1.3+dfsg1-3.dsc
  spyder_3.1.3+dfsg1-3.debian.tar.xz
  spyder_3.1.3+dfsg1-3_source.buildinfo

Greetings,

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Bug#859529: should we RM imview-doc ?

2017-04-04 Thread Mattia Rizzolo
Source: imview-doc
Version: 1.0.1-3
Severity: serious
X-Debbugs-cc: debian-scie...@lists.debian.org

should we remove imview-doc ?
It has an outstanding license issue https://bugs.debian.org/708955
and it seems nobody cared about it since 2008.

-- 
regards,
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GPG Key: 66AE 2B4A FCCF 3F52 DA18  4D18 4B04 3FCD B944 4540  .''`.
more about me:  https://mapreri.org : :'  :
Launchpad user: https://launchpad.net/~mapreri  `. `'`
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Bug#859512: marked as done (heaptrack: Could not find heaptrack interpreter executable: heaptrack_interpret)

2017-04-04 Thread Debian Bug Tracking System
Your message dated Tue, 04 Apr 2017 16:18:47 +
with message-id 
and subject line Bug#859512: fixed in heaptrack 1.0.0-2
has caused the Debian Bug report #859512,
regarding heaptrack: Could not find heaptrack interpreter executable: 
heaptrack_interpret
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
859512: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=859512
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: heaptrack
Version: 1.0.0-1
Severity: grave
Justification: renders package unusable

Dear Maintainer,

sorry I cannot be of more help since I was merely evaluating the
package, but when I try to trace the execution of any program, I get
the error:

$ heaptrack /bin/ls
Could not find heaptrack interpreter executable: 
/usr/bin/../lib/heaptrack/libexec/heaptrack_interpret

Certainly, I cannot find any heaptrack_interpret file on my system.

I am using the fish shell, but nothing changed when using bash.

Thanks!

-- System Information:
Debian Release: 9.0
  APT prefers testing
  APT policy: (500, 'testing'), (300, 'unstable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.9.0-1-amd64 (SMP w/8 CPU cores)
Locale: LANG=es_ES.UTF-8, LC_CTYPE=es_ES.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages heaptrack depends on:
ii  libboost-iostreams1.62.01.62.0+dfsg-4
ii  libboost-program-options1.62.0  1.62.0+dfsg-4
ii  libboost-regex1.62.01.62.0+dfsg-4
ii  libc6   2.24-9
ii  libgcc1 1:6.3.0-11
ii  libstdc++6  6.3.0-11
ii  zlib1g  1:1.2.8.dfsg-5

heaptrack recommends no packages.

heaptrack suggests no packages.

-- no debconf information
--- End Message ---
--- Begin Message ---
Source: heaptrack
Source-Version: 1.0.0-2

We believe that the bug you reported is fixed in the latest version of
heaptrack, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 859...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Anton Gladky  (supplier of updated heaptrack package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 04 Apr 2017 18:09:48 +0200
Source: heaptrack
Binary: heaptrack heaptrack-gui libheaptrack
Architecture: source
Version: 1.0.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Anton Gladky 
Description:
 heaptrack  - Heap memory profiler for Linux
 heaptrack-gui - Heap memory profiler for Linux
 libheaptrack - Heap memory profiler for Linux
Closes: 859512
Changes:
 heaptrack (1.0.0-2) unstable; urgency=medium
 .
   * [cf6520a] Add kio-dev as a build-dependency.
   * [8879be4] Add libheaptrack as a dependency of (Closes: #859512)
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heaptrack_1.0.0-2_source.changes ACCEPTED into unstable

2017-04-04 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 04 Apr 2017 18:09:48 +0200
Source: heaptrack
Binary: heaptrack heaptrack-gui libheaptrack
Architecture: source
Version: 1.0.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Anton Gladky 
Description:
 heaptrack  - Heap memory profiler for Linux
 heaptrack-gui - Heap memory profiler for Linux
 libheaptrack - Heap memory profiler for Linux
Closes: 859512
Changes:
 heaptrack (1.0.0-2) unstable; urgency=medium
 .
   * [cf6520a] Add kio-dev as a build-dependency.
   * [8879be4] Add libheaptrack as a dependency of (Closes: #859512)
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Thank you for your contribution to Debian.

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Processing of heaptrack_1.0.0-2_source.changes

2017-04-04 Thread Debian FTP Masters
heaptrack_1.0.0-2_source.changes uploaded successfully to localhost
along with the files:
  heaptrack_1.0.0-2.dsc
  heaptrack_1.0.0-2.debian.tar.xz
  heaptrack_1.0.0-2_source.buildinfo

Greetings,

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Bug#859512: heaptrack: Could not find heaptrack interpreter executable: heaptrack_interpret

2017-04-04 Thread Alberto Luaces
Package: heaptrack
Version: 1.0.0-1
Severity: grave
Justification: renders package unusable

Dear Maintainer,

sorry I cannot be of more help since I was merely evaluating the
package, but when I try to trace the execution of any program, I get
the error:

$ heaptrack /bin/ls
Could not find heaptrack interpreter executable: 
/usr/bin/../lib/heaptrack/libexec/heaptrack_interpret

Certainly, I cannot find any heaptrack_interpret file on my system.

I am using the fish shell, but nothing changed when using bash.

Thanks!

-- System Information:
Debian Release: 9.0
  APT prefers testing
  APT policy: (500, 'testing'), (300, 'unstable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.9.0-1-amd64 (SMP w/8 CPU cores)
Locale: LANG=es_ES.UTF-8, LC_CTYPE=es_ES.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages heaptrack depends on:
ii  libboost-iostreams1.62.01.62.0+dfsg-4
ii  libboost-program-options1.62.0  1.62.0+dfsg-4
ii  libboost-regex1.62.01.62.0+dfsg-4
ii  libc6   2.24-9
ii  libgcc1 1:6.3.0-11
ii  libstdc++6  6.3.0-11
ii  zlib1g  1:1.2.8.dfsg-5

heaptrack recommends no packages.

heaptrack suggests no packages.

-- no debconf information

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mumps_5.1.1-1exp1_amd64.changes ACCEPTED into experimental, experimental

2017-04-04 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 29 Mar 2017 21:17:12 +0800
Source: mumps
Binary: libmumps-dev libmumps-seq-dev libmumps-5.1.1 libmumps-seq-5.1.1 
libmumps-scotch-5.1.1 libmumps-scotch-dev libmumps-ptscotch-5.1.1 
libmumps-ptscotch-dev mumps-test
Architecture: source amd64
Version: 5.1.1-1exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Drew Parsons 
Description:
 libmumps-5.1.1 - Direct linear systems solver - parallel shared libraries
 libmumps-dev - Direct linear systems solver - parallel development files
 libmumps-ptscotch-5.1.1 - Direct linear systems solver - PTScotch-version 
shared libraries
 libmumps-ptscotch-dev - Direct linear systems solver - PTScotch-version 
development files
 libmumps-scotch-5.1.1 - Direct linear systems solver - Scotch-version shared 
libraries
 libmumps-scotch-dev - Direct linear systems solver - Scotch-version 
development files
 libmumps-seq-5.1.1 - Direct linear systems solver - non-parallel shared 
libraries
 libmumps-seq-dev - Direct linear systems solver - non-parallel development 
files
 mumps-test - Example/test binaries using MUMPS
Closes: 825824
Changes:
 mumps (5.1.1-1exp1) experimental; urgency=medium
 .
   * Team upload.
   * New upstream version. Closes: #825824.
 - copyright now licenced under CeCILL-C
   * Standards-Version: 3.9.8
   * Place libs in multiarch subdirs. Build-Depends: dh-exec (>=0.3).
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Bug#825824: marked as done (libmumps-dev: MUMPS 5.0.1 version bump)

2017-04-04 Thread Debian Bug Tracking System
Your message dated Tue, 04 Apr 2017 10:00:14 +
with message-id 
and subject line Bug#825824: fixed in mumps 5.1.1-1exp1
has caused the Debian Bug report #825824,
regarding libmumps-dev: MUMPS 5.0.1 version bump
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
825824: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=825824
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libmumps-dev
Version: 4.10.0.dfsg-4
Severity: wishlist

MUMPS 5.0.1 has been released a while ago. Please bump.



-- System Information:
Debian Release: stretch/sid
  APT prefers xenial-updates
  APT policy: (500, 'xenial-updates'), (500, 'xenial-security'), (500, 
'xenial'), (100, 'xenial-backports')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.4.0-22-generic (SMP w/4 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages libmumps-dev depends on:
ii  libmumps-4.10.0   4.10.0.dfsg-4
ii  libscalapack-mpi-dev  1.8.0-12.3
ii  mpi-default-dev   1.4

libmumps-dev recommends no packages.

libmumps-dev suggests no packages.

-- no debconf information
--- End Message ---
--- Begin Message ---
Source: mumps
Source-Version: 5.1.1-1exp1

We believe that the bug you reported is fixed in the latest version of
mumps, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 825...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Drew Parsons  (supplier of updated mumps package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 29 Mar 2017 21:17:12 +0800
Source: mumps
Binary: libmumps-dev libmumps-seq-dev libmumps-5.1.1 libmumps-seq-5.1.1 
libmumps-scotch-5.1.1 libmumps-scotch-dev libmumps-ptscotch-5.1.1 
libmumps-ptscotch-dev mumps-test
Architecture: source amd64
Version: 5.1.1-1exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Drew Parsons 
Description:
 libmumps-5.1.1 - Direct linear systems solver - parallel shared libraries
 libmumps-dev - Direct linear systems solver - parallel development files
 libmumps-ptscotch-5.1.1 - Direct linear systems solver - PTScotch-version 
shared libraries
 libmumps-ptscotch-dev - Direct linear systems solver - PTScotch-version 
development files
 libmumps-scotch-5.1.1 - Direct linear systems solver - Scotch-version shared 
libraries
 libmumps-scotch-dev - Direct linear systems solver - Scotch-version 
development files
 libmumps-seq-5.1.1 - Direct linear systems solver - non-parallel shared 
libraries
 libmumps-seq-dev - Direct linear systems solver - non-parallel development 
files
 mumps-test - Example/test binaries using MUMPS
Closes: 825824
Changes:
 mumps (5.1.1-1exp1) experimental; urgency=medium
 .
   * Team upload.
   * New upstream version. Closes: #825824.
 - copyright now licenced under CeCILL-C
   * Standards-Version: 3.9.8
   * Place libs in multiarch subdirs. Build-Depends: dh-exec (>=0.3).
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Bug#859492: mumps: Incomplete debian/copyright?

2017-04-04 Thread Drew Parsons
tags 859492 + fixed pending
thanks

On Tue, 2017-04-04 at 10:03 +0100, Chris Lamb wrote:
> 
> I just ACCEPTed mumps from NEW but noticed it was missing
> attribution 
> in debian/copyright for at least src/ana_orderings.F.
> 
> (This is not exhaustive so please check over the entire package 
> carefully and address these on your next upload.)
> 

Thanks Chris, I've added a copyright entry in git.

A copyright grep doesn't show up any other anomalies.

Drew

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r-cran-shinyjs_0.9-1_amd64.changes ACCEPTED into unstable, unstable

2017-04-04 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 22 Mar 2017 09:58:10 +0100
Source: r-cran-shinyjs
Binary: r-cran-shinyjs
Architecture: source all
Version: 0.9-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Leopold Palomo-Avellaneda 
Description:
 r-cran-shinyjs - Easily Improve the User Experience of Your Shiny Apps in 
Seconds
Closes: 858443
Changes:
 r-cran-shinyjs (0.9-1) unstable; urgency=medium
 .
   * Initial release (closes: #858443)
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Thank you for your contribution to Debian.

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Processed: Re: Bug#859492: mumps: Incomplete debian/copyright?

2017-04-04 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 859492 + fixed pending
Bug #859492 [src:mumps] mumps: Incomplete debian/copyright?
Added tag(s) fixed and pending.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
859492: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=859492
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

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Bug#859492: mumps: Incomplete debian/copyright?

2017-04-04 Thread Chris Lamb
Source: mumps
Version: 5.1.1-1exp1
Severity: serious
Justication: Policy 12.5
X-Debbugs-CC: Drew Parsons 

Hi,

I just ACCEPTed mumps from NEW but noticed it was missing attribution 
in debian/copyright for at least src/ana_orderings.F.

(This is not exhaustive so please check over the entire package 
carefully and address these on your next upload.)


Regards,

-- 
  ,''`.
 : :'  : Chris Lamb
 `. `'`  la...@debian.org / chris-lamb.co.uk
   `-

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heaptrack_1.0.0-1_amd64.changes ACCEPTED into unstable, unstable

2017-04-04 Thread Debian FTP Masters


Accepted:

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Hash: SHA256

Format: 1.8
Date: Fri, 20 Jan 2017 20:14:59 +0100
Source: heaptrack
Binary: heaptrack heaptrack-gui libheaptrack
Architecture: source amd64
Version: 1.0.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Anton Gladky 
Description:
 heaptrack  - Heap memory profiler for Linux
 heaptrack-gui - Heap memory profiler for Linux
 libheaptrack - Heap memory profiler for Linux
Closes: 858858
Changes:
 heaptrack (1.0.0-1) unstable; urgency=medium
 .
   * Initial upload. (Closes: #858858)
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heaptrack_1.0.0-1.debian.tar.xz
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heaptrack-dbgsym_1.0.0-1_amd64.deb
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heaptrack-gui-dbgsym_1.0.0-1_amd64.deb
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heaptrack-gui_1.0.0-1_amd64.deb
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heaptrack_1.0.0-1_amd64.deb
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Thank you for your contribution to Debian.

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spyder-line-profiler_0.1.1-1_i386.changes ACCEPTED into unstable, unstable

2017-04-04 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 27 Mar 2017 22:25:45 +0100
Source: spyder-line-profiler
Binary: python3-spyder-line-profiler
Architecture: source all
Version: 0.1.1-1
Distribution: unstable
Urgency: low
Maintainer: Debian Science Maintainers 

Changed-By: Ghislain Antony Vaillant 
Description:
 python3-spyder-line-profiler - line profiling plugin for the Spyder IDE
Closes: 858862
Changes:
 spyder-line-profiler (0.1.1-1) unstable; urgency=low
 .
   * Initial release. (Closes: #858862)
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spyder-line-profiler_0.1.1.orig.tar.gz
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spyder-line-profiler_0.1.1-1.debian.tar.xz
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python3-spyder-line-profiler_0.1.1-1_all.deb
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Thank you for your contribution to Debian.

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