Bug#877419: [Help] Exclusion did not worked (Was: Bug#877419: Bug#877700: RM: pandas [arm64 armel armhf mips mips64el mipsel s390x] ...)
Hi, for arm64 the method I uploaded has seemed to work but for mips and s390x it ends up in ... ERRORS ERROR collecting debian/tmp/usr/lib/python2.7/dist-packages/pandas/tests/io/test_stata.py ../debian/tmp/usr/lib/python2.7/dist-packages/pandas/tests/io/test_stata.py:27: in raise nose.SkipTest("known failure of test_stata on non-little endian") E NameError: name 'nose' is not defined !!! Interrupted: 1 errors during collection = 10 tests deselected == = 2 skipped, 10 deselected, 1 error in 144.89 seconds == XIO: fatal IO error 11 (Resource temporarily unavailable) on X server ":99" after 11 requests (8 known processed) with 0 events remaining. debian/rules:112: recipe for target 'python-test2.7' failed ... If someone has an idea how to fix this please go on. Kind regards Andreas. -- http://fam-tille.de -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
python-bayespy 0.5.11-1 MIGRATED to testing
FYI: The status of the python-bayespy source package in Debian's testing distribution has changed. Previous version: 0.5.8-1 Current version: 0.5.11-1 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will receive later changes on the next day. See https://release.debian.org/testing-watch/ for more information. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
pyzo 4.4.3-1 MIGRATED to testing
FYI: The status of the pyzo source package in Debian's testing distribution has changed. Previous version: 4.4.1-1 Current version: 4.4.3-1 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will receive later changes on the next day. See https://release.debian.org/testing-watch/ for more information. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
p4est 1.1-5 MIGRATED to testing
FYI: The status of the p4est source package in Debian's testing distribution has changed. Previous version: 1.1-4 Current version: 1.1-5 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will receive later changes on the next day. See https://release.debian.org/testing-watch/ for more information. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
scilab-ann is marked for autoremoval from testing
scilab-ann 0.4.2.4-1 is marked for autoremoval from testing on 2017-11-08 It (build-)depends on packages with these RC bugs: 876733: jeuclid: Unclear licensing -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
sciscipy is marked for autoremoval from testing
sciscipy 1.0.1-2 is marked for autoremoval from testing on 2017-11-08 It (build-)depends on packages with these RC bugs: 876733: jeuclid: Unclear licensing -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
scilab-plotlib is marked for autoremoval from testing
scilab-plotlib 0.42-1 is marked for autoremoval from testing on 2017-11-08 It (build-)depends on packages with these RC bugs: 876733: jeuclid: Unclear licensing -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
scilab-celestlab is marked for autoremoval from testing
scilab-celestlab 3.0.0-1-2 is marked for autoremoval from testing on 2017-11-08 It (build-)depends on packages with these RC bugs: 876733: jeuclid: Unclear licensing -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#878617: libspooles-dev: installs .pc/ files into a binary package
Package: libspooles-dev Version: 2.2-12+b1 Severity: normal Hi! I'm afraid your package installs some quilt droppings: /usr/include/spooles/.pc /usr/include/spooles/.pc/fix_FTBFS_timings.patch /usr/include/spooles/.pc/fix_FTBFS_timings.patch/timings.h Meow! -- System Information: Debian Release: buster/sid APT prefers unstable-debug APT policy: (500, 'unstable-debug'), (500, 'unstable'), (500, 'testing'), (150, 'experimental') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 4.13.6+ (SMP w/6 CPU cores) Locale: LANG=C.UTF-8, LC_CTYPE=C.UTF-8 (charmap=UTF-8), LANGUAGE=C.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: sysvinit (via /sbin/init) Versions of packages libspooles-dev depends on: ii libspooles2.22.2-12+b1 ii mpi-default-dev 1.9 libspooles-dev recommends no packages. Versions of packages libspooles-dev suggests: pn spooles-doc -- no debconf information -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#878596: theano: FTBFS on big-endian systems - test_pooling_with_tensor_vars fails
Package: python-theano Version: 0.9.0+dfsg-1 Severity: serious Suspect the problem is theano/theano/tensor/signal/pool.py:650, which effectively does int32 = *(int64 *)(pointer_to_some_int_type) - if some_int_type is int32, that works on little-endian but not big-endian. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#878595: gazebo7: please update depends on fonts-liberation
Package: gazebo7 Version: 0.3.2.1-1 Severity: important user: qa.debian@packages.debian.org usertags: transitional Please update gazebo7's depends and depend on fonts-liberation instead of ttf-liberation, which will be going away next week (after being a transitional package since wheezy), at which point your package will become uninstallable and RC-buggy. Thanks for maintaining gazebo7! -- cheers, Holger signature.asc Description: PGP signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
pandas_0.20.3-4_source.changes ACCEPTED into unstable
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 14 Oct 2017 19:49:01 +0200 Source: pandas Binary: python-pandas python3-pandas python-pandas-doc python-pandas-lib python3-pandas-lib Architecture: source Version: 0.20.3-4 Distribution: unstable Urgency: medium Maintainer: Debian Science TeamChanged-By: Andreas Tille Description: python-pandas - data structures for "relational" or "labeled" data python-pandas-doc - documentation and examples for pandas python-pandas-lib - low-level implementations and bindings for pandas python3-pandas - data structures for "relational" or "labeled" data - Python 3 python3-pandas-lib - low-level implementations and bindings for pandas - Python 3 Changes: pandas (0.20.3-4) unstable; urgency=medium . * Mark those tests @pytest.mark.intel that pass only on Intel architectures * d/rules: try to exclude tests that were marked "intel" (Concerns bug #877419) Checksums-Sha1: 18f8c9b7da8d7b25627ada929a2be3973eeb6fad 3611 pandas_0.20.3-4.dsc 5b0629857e0ee9956cf3cbc4e6b7067a94e565a0 2873736 pandas_0.20.3-4.debian.tar.xz 79b0f748dec80632f10ac17e64effb815d07e96a 18163 pandas_0.20.3-4_source.buildinfo Checksums-Sha256: 89f4e79cf49780d882e9f7641dd312e9dd39d5b54a8a4d67b10b99a716f7873f 3611 pandas_0.20.3-4.dsc abcf9d8451c2942050bbe46898f6a28812270bb2d9dd75f30ce7834302e5877b 2873736 pandas_0.20.3-4.debian.tar.xz 792197682e7dfe8b442dcaf494ab26d748f5a0316d78c1c092f97fefedeaf7f1 18163 pandas_0.20.3-4_source.buildinfo Files: c62329c867442a776ca2995ca3c8f7e7 3611 python optional pandas_0.20.3-4.dsc 979903b629fd43ffee40023c1a717ff0 2873736 python optional pandas_0.20.3-4.debian.tar.xz a2311201f16b8c988dbe772f67e51fb6 18163 python optional pandas_0.20.3-4_source.buildinfo -BEGIN PGP SIGNATURE- iQJCBAEBCAAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlnieMkOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtEgyRAAkZlZz0QeU7H2CtnKvA4YG5VVuR6F/84w3Xx5 db2W8SNbK7JpbnGJEaFof8CkNAQPLCRPxHZaqHrDEgnA3+0j8xBguZho+ofHdxiQ pF4JBQalQcqQYw7FVMrvzZzsoEO9f1JIqx6Ni3Tf7neYJnBxRtZ8pnILqFfEJI1G EltITkB2vn+DiKJTaPvVwYDl2WgpxJfDQlZVkG7hGRedKXvqJnny99l8hCRYWqYP of6ebwZQTg48e1Fp3zCvpKjLysTpJmWiBtegdD11BKbZdpS4FGcpE5jQjLpJv4W/ l92vdmqOjPUlitypbBag4JJD+IyuK/gan2/qZ6hPR40LzK2XmCkDGxD82DobKaUI iqbWjFjuGTivwcnwTxhTPjlxdQprBrEV3ps0iO8iMX5NV/jaF1N0ji5ENKMITQaU UbfnloDaIVCvqacYGv7/w4piAzarsWg1NJwm8uJOXAwBCPWrh3SicqZAlp00eb/T 9aDsVJBCP5KR8Sl0Y1inUWcGNqtRDDuZLHdKgowpDUz/PGHaFJ4nrrwOmWaUhrme A8kwd/qL/7yRRqsPbS5iK0B5Svk8ttwwL42FjYMxsnMziA8ZNhEoHZFTNb3VUwS+ ePQZ8yBhaX1ejAiD5jus6N4NA35CkITEx7Rc4NRY1d2JHHWVYOb+x+HTUQuRvUGs SRmqi3E= =XhLU -END PGP SIGNATURE- Thank you for your contribution to Debian. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#877419: [Help] Exclusion did not worked (Was: Bug#877419: Bug#877700: RM: pandas [arm64 armel armhf mips mips64el mipsel s390x] ...)
Hi Yaroslav, thanks for those hints that somehow came to late since I just read it after I implemented some hopefully working solution. I just uploaded and we'll see what might happen. Every reader here is invited to fix it if not / enhance it if not happy. :-) Kind regards Andreas. On Sat, Oct 14, 2017 at 01:13:56PM -0400, Yaroslav Halchenko wrote: > > FWIW my 1c to make someone pay 1$ (in proportion of time to be spent to > actually do it): > > yeah, with nosetests it was possible to exclude in the command line... on a > quick google I didn't find for pytest (not that it doesn't exist), but > started to wonder if indeed would be better to provide a patch (to upstream) > for tests which are known to be failing on specific architectures, something > like > > @known_to_fail_on(archs=['armel', ...]) > @known_to_fail_on_bigendian > @known_to_fail_on_nonx32 > > see https://docs.pytest.org/en/latest/skipping.html#id1 on how to > establish those for now based on skipif . "For now", since ideally there > should be an easy way to trigger another behavior -- test which tests > known to fail before now pass. (we have got something like that in > datalad now for demarkating tests which fail atm with v6 of git-annex > repo) > > upstream actually already has some tests marked up: > > pandas/tests/indexes/test_interval.py: > @pytest.mark.skipif(compat.is_platform_32bit(), > pandas/tests/io/json/test_pandas.py: > @pytest.mark.skipif(is_platform_32bit(), > pandas/tests/io/json/test_ujson.py: > @pytest.mark.skipif(compat.is_platform_32bit(), > pandas/tests/io/json/test_ujson.py: > @pytest.mark.skipif(compat.is_platform_windows() and not compat.PY3, > > # and here comes a demo of the cool -p switch for git grep: > > $> git grep -p skip.*endian pandas > pandas/tests/frame/test_constructors.py=class > TestDataFrameConstructors(TestData): > pandas/tests/frame/test_constructors.py:pytest.skip("known > failure of test on non-little endian") > pandas/tests/io/test_pickle.py=def test_pickles(current_pickle_data, version): > pandas/tests/io/test_pickle.py:pytest.skip("known failure on > non-little endian") > > -- > Yaroslav O. Halchenko > Center for Open Neuroscience http://centerforopenneuroscience.org > Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 > Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 > WWW: http://www.linkedin.com/in/yarik > -- http://fam-tille.de -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of pandas_0.20.3-4_source.changes
pandas_0.20.3-4_source.changes uploaded successfully to localhost along with the files: pandas_0.20.3-4.dsc pandas_0.20.3-4.debian.tar.xz pandas_0.20.3-4_source.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#877419: [Help] Exclusion did not worked (Was: Bug#877419: Bug#877700: RM: pandas [arm64 armel armhf mips mips64el mipsel s390x] ...)
On Sat, 14 Oct 2017, Ghislain Vaillant wrote: > On 14/10/17 07:54, Andreas Tille wrote: > > On Fri, Oct 13, 2017 at 08:00:36PM +0200, Andreas Tille wrote: > > ... > > pandas_datareader: None > > usage: pytest.py [options] [file_or_dir] [file_or_dir] [...] > > pytest.py: error: unrecognized arguments: --exclude > >inifile: /<>/setup.cfg > >rootdir: /<> > > debian/rules:109: recipe for target 'python-test2.7' failed > > ... > > I confirm that I have not found the --exclude option for pytest. > > I'm not that experienced with pytest. From some short research I had > > the idea to quilt patch some "slow" markers for the failing tests and > > for the affected architectures ignore those "slow" tests. > > Any better technical idea? > Indeed you could use a custom "slow" marker for it. The corresponding patch > should be upstreamable too if appropriately motivated. FWIW my 1c to make someone pay 1$ (in proportion of time to be spent to actually do it): yeah, with nosetests it was possible to exclude in the command line... on a quick google I didn't find for pytest (not that it doesn't exist), but started to wonder if indeed would be better to provide a patch (to upstream) for tests which are known to be failing on specific architectures, something like @known_to_fail_on(archs=['armel', ...]) @known_to_fail_on_bigendian @known_to_fail_on_nonx32 see https://docs.pytest.org/en/latest/skipping.html#id1 on how to establish those for now based on skipif . "For now", since ideally there should be an easy way to trigger another behavior -- test which tests known to fail before now pass. (we have got something like that in datalad now for demarkating tests which fail atm with v6 of git-annex repo) upstream actually already has some tests marked up: pandas/tests/indexes/test_interval.py: @pytest.mark.skipif(compat.is_platform_32bit(), pandas/tests/io/json/test_pandas.py:@pytest.mark.skipif(is_platform_32bit(), pandas/tests/io/json/test_ujson.py: @pytest.mark.skipif(compat.is_platform_32bit(), pandas/tests/io/json/test_ujson.py: @pytest.mark.skipif(compat.is_platform_windows() and not compat.PY3, # and here comes a demo of the cool -p switch for git grep: $> git grep -p skip.*endian pandas pandas/tests/frame/test_constructors.py=class TestDataFrameConstructors(TestData): pandas/tests/frame/test_constructors.py:pytest.skip("known failure of test on non-little endian") pandas/tests/io/test_pickle.py=def test_pickles(current_pickle_data, version): pandas/tests/io/test_pickle.py:pytest.skip("known failure on non-little endian") -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
silx_0.6.0+dfsg-1~bpo9+1_i386.changes REJECTED
python-silx-dbg-dbgsym_0.6.0+dfsg-1~bpo9+1_i386.deb: trying to install to backports-new, but could not find source binary:python-silx-dbg is NEW. binary:python-silx is NEW. binary:python3-silx-dbg is NEW. binary:python3-silx is NEW. === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of silx_0.6.0+dfsg-1~bpo9+1_i386.changes
silx_0.6.0+dfsg-1~bpo9+1_i386.changes uploaded successfully to localhost along with the files: python-silx-dbg-dbgsym_0.6.0+dfsg-1~bpo9+1_i386.deb python-silx-dbg_0.6.0+dfsg-1~bpo9+1_i386.deb python-silx-dbgsym_0.6.0+dfsg-1~bpo9+1_i386.deb python-silx_0.6.0+dfsg-1~bpo9+1_i386.deb python3-silx-dbg-dbgsym_0.6.0+dfsg-1~bpo9+1_i386.deb python3-silx-dbg_0.6.0+dfsg-1~bpo9+1_i386.deb python3-silx-dbgsym_0.6.0+dfsg-1~bpo9+1_i386.deb python3-silx_0.6.0+dfsg-1~bpo9+1_i386.deb silx_0.6.0+dfsg-1~bpo9+1_i386.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#867370: marked as done (src:theano: Unnecessary python3-all-dev build-depends complicate transition)
Your message dated Sat, 14 Oct 2017 09:10:09 + with message-idand subject line Bug#867370: fixed in theano 0.9.0+dfsg-1 has caused the Debian Bug report #867370, regarding src:theano: Unnecessary python3-all-dev build-depends complicate transition to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 867370: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=867370 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems --- Begin Message --- Package: src:theano Version: 0.8.2-6 Severity: important As far as I can tell, python3-theano does not install any compiled content that requires access to the Python headers (e.g. Python.h). As a result, the package build-depend on python3-all-dev is excessive. We use build-depends on python3-all-dev and python3-dev to track which package need rebuilding for a python3 transition and as far as I can determine, this one does not. I rebuilt the package without any python-dev package installed and the result, according to debdiff, was identical. Not including a patch for the trivial change of changing the build-depends on python3-all-dev to python3-all. Marking important because of the potential for impact on transition planning. Scott K --- End Message --- --- Begin Message --- Source: theano Source-Version: 0.9.0+dfsg-1 We believe that the bug you reported is fixed in the latest version of theano, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 867...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Rebecca N. Palmer (supplier of updated theano package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 30 Sep 2017 13:50:38 +0100 Source: theano Binary: python-theano python3-theano theano-doc Architecture: all amd64 source Version: 0.9.0+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Rebecca N. Palmer Closes: 852138 867370 Description: python3-theano - CPU/GPU math expression compiler for Python 3 python-theano - CPU/GPU math expression compiler for Python theano-doc - CPU/GPU math expression compiler for Python (docs) Changes: theano (0.9.0+dfsg-1) unstable; urgency=medium . * New upstream release. * Drop patches applied upstream, refresh others. * Only remove the privacy-violating part of doc/index.txt, not all of News and Download. * Change Uploaders. (Closes: #852138) * Update and sort d/copyright. * Disable another wall-clock speed test (similar to #835531). * Bump Standards-Version to 4.1.1 (no changes needed). * Bump compat to 10. * Recommend python(3)-pygpu and g++. * Use the Python 3 versions of sphinx and pygments. * Build-depend on python3-sphinx-rtd-theme. * Use the version in doc->source links, not a (usually non-existent) git commit number. * Make tests work with older nose-parameterized. * Use python(3)-dev not -all-dev. (Closes: #867370) * Remove pre-minified Javascript, and instead minify at build time. * Use libjs-d3 instead of the embedded copy, but re-minify to work around #745688. * Clean up properly after build. * Use Suggests, not Recommends, between package and documentation. Checksums-Sha1: d19f93ec3ae87d2c47dc97eeb24a971293528a2c 2879 theano_0.9.0+dfsg-1.dsc 734abf7da9c09022cff0af2f21bc1066f536e098 13296847 theano_0.9.0+dfsg.orig.tar.gz cec0b986d1e5b5f79fbad8698d2ab4568602ec04 91388 theano_0.9.0+dfsg-1.debian.tar.xz bfb5b68a8f7388d7b7e0ee04b1447299dc6497da 2156134 python-theano_0.9.0+dfsg-1_amd64.deb 42a572bd623d745f2c42b408ae076fcefcf323b3 2156200 python3-theano_0.9.0+dfsg-1_amd64.deb ffcd2aa694b93360f35033027ba8ca0d1b52c65d 5751054 theano-doc_0.9.0+dfsg-1_all.deb 9e7ca2f7a6e5b6d517f7b03d78cc6058714d964b 13202 theano_0.9.0+dfsg-1_amd64.buildinfo Checksums-Sha256: 33ed19308ffadfc2ecaf15482706bf1d07e75911095ef53e1e829b9a29440e8e 2879 theano_0.9.0+dfsg-1.dsc 380b6fd721c7a925993b0c324b510c25a5dcd01c8d2aad42e5777e547835d799 13296847 theano_0.9.0+dfsg.orig.tar.gz
theano_0.9.0+dfsg-1_multi.changes ACCEPTED into unstable
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 30 Sep 2017 13:50:38 +0100 Source: theano Binary: python-theano python3-theano theano-doc Architecture: all amd64 source Version: 0.9.0+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Science MaintainersChanged-By: Rebecca N. Palmer Closes: 852138 867370 Description: python3-theano - CPU/GPU math expression compiler for Python 3 python-theano - CPU/GPU math expression compiler for Python theano-doc - CPU/GPU math expression compiler for Python (docs) Changes: theano (0.9.0+dfsg-1) unstable; urgency=medium . * New upstream release. * Drop patches applied upstream, refresh others. * Only remove the privacy-violating part of doc/index.txt, not all of News and Download. * Change Uploaders. (Closes: #852138) * Update and sort d/copyright. * Disable another wall-clock speed test (similar to #835531). * Bump Standards-Version to 4.1.1 (no changes needed). * Bump compat to 10. * Recommend python(3)-pygpu and g++. * Use the Python 3 versions of sphinx and pygments. * Build-depend on python3-sphinx-rtd-theme. * Use the version in doc->source links, not a (usually non-existent) git commit number. * Make tests work with older nose-parameterized. * Use python(3)-dev not -all-dev. (Closes: #867370) * Remove pre-minified Javascript, and instead minify at build time. * Use libjs-d3 instead of the embedded copy, but re-minify to work around #745688. * Clean up properly after build. * Use Suggests, not Recommends, between package and documentation. Checksums-Sha1: d19f93ec3ae87d2c47dc97eeb24a971293528a2c 2879 theano_0.9.0+dfsg-1.dsc 734abf7da9c09022cff0af2f21bc1066f536e098 13296847 theano_0.9.0+dfsg.orig.tar.gz cec0b986d1e5b5f79fbad8698d2ab4568602ec04 91388 theano_0.9.0+dfsg-1.debian.tar.xz bfb5b68a8f7388d7b7e0ee04b1447299dc6497da 2156134 python-theano_0.9.0+dfsg-1_amd64.deb 42a572bd623d745f2c42b408ae076fcefcf323b3 2156200 python3-theano_0.9.0+dfsg-1_amd64.deb ffcd2aa694b93360f35033027ba8ca0d1b52c65d 5751054 theano-doc_0.9.0+dfsg-1_all.deb 9e7ca2f7a6e5b6d517f7b03d78cc6058714d964b 13202 theano_0.9.0+dfsg-1_amd64.buildinfo Checksums-Sha256: 33ed19308ffadfc2ecaf15482706bf1d07e75911095ef53e1e829b9a29440e8e 2879 theano_0.9.0+dfsg-1.dsc 380b6fd721c7a925993b0c324b510c25a5dcd01c8d2aad42e5777e547835d799 13296847 theano_0.9.0+dfsg.orig.tar.gz 23ba1086701d13db965c831acbbed423e06d5fdb5676ea8e1cf5f625df19d57a 91388 theano_0.9.0+dfsg-1.debian.tar.xz 76f058e1e82260d218b8da970c8a9376e24523a2e144dcc206ef144a37b49c3d 2156134 python-theano_0.9.0+dfsg-1_amd64.deb 3294250c4fa836532c2fcf6fc14b20c7d1ab9413d949bfbea6a2edaae6fda535 2156200 python3-theano_0.9.0+dfsg-1_amd64.deb c7b6801219e5ab617f8d104c2dd0d3741be8d644d615e8bec69b5ba35e3537f0 5751054 theano-doc_0.9.0+dfsg-1_all.deb 913d636b7378b6232e8922c55093bf7e0219b4be9868e3518931db2666394047 13202 theano_0.9.0+dfsg-1_amd64.buildinfo Files: ca701b76acd02cbb6e9b03ee3d034e31 2879 science optional theano_0.9.0+dfsg-1.dsc a476eab0a42ae02da38ecb42ea8f82ff 13296847 science optional theano_0.9.0+dfsg.orig.tar.gz 842cfbcfa67b34ff56c028f3c8d40d84 91388 science optional theano_0.9.0+dfsg-1.debian.tar.xz b8cd7fdf91e32738ff7ce7c1c9d1e5e2 2156134 python optional python-theano_0.9.0+dfsg-1_amd64.deb c750b3f51fa3c23a9f49fa2c53af7f24 2156200 python optional python3-theano_0.9.0+dfsg-1_amd64.deb 807964e424b150f0f4eecfe1e18402ce 5751054 doc optional theano-doc_0.9.0+dfsg-1_all.deb 1f27ed590724cafdc06efeb2bb9f3130 13202 science optional theano_0.9.0+dfsg-1_amd64.buildinfo -BEGIN PGP SIGNATURE- iQIzBAEBCgAdFiEERsscqJ6jt0N2dh25FeCa9N9RgsgFAlnhx2IACgkQFeCa9N9R gsgLRBAAjKWn9Cx6QUWn+7JUXZGUwalvMqfjPDlg7utk977wKGZ6me2lvFa7q1t8 YT4XFCQE5myyvuPvw5nQ2FxDXzbwY7YJkuHxclQCaDGBcen6/dhg35UddzkO5Cfm nc159L7wY0kOXHNE3cKyEkZP05ow58bdJefebu1NEJYGrjPH/PXgS5oC0PeSOg2R QIhU7DNdERRcaurQuPJNdwDmWVGmq9JwabOnqvlDbI9PXHlFdIxBvV9rYb5V8aFM eWZZ9y9etepnL7ZyDDCguqzap2CPQqZhdPpA6a+xtYpIGkEaGuAzcbiMPFgtK2wL 54bGa9MZ9NzPyaA0JtPbxyykY7CAcSAmAlms0Fz1qqT2eMoXYNzPKMJn8MGUPavR Ko6/P/F9LY0WaKu3PSRCI7MK/dedwyIWKJOe3ZiSw0KqhV79o8UzBrZvhi1eJH4h CoqibiS5CioW7jgtQ+Q25LR/OnJvmjYWvAv39q2yXACltRmgqxNftCwOd3zlvBND 8dtOjYzktvvKQUGsTYXECgClJIaI8udFZMN59VtRTjcgZpndZ4hViJai86zoqq1X lio37Qok8uRFoPBbrJOZkNjleP0z6RGR2WmE7spfN6db4UITQ9JjDcojUFz/WraC YqmQcepBoMWLCVqPCcdHtDxvehM2m2JUR1nWNB1V7OYBsCcsfdA= =X4IC -END PGP SIGNATURE- Thank you for your contribution to Debian. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
r-cran-isocodes_2017.09.27-1_source.changes ACCEPTED into unstable
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 14 Oct 2017 10:39:22 +0200 Source: r-cran-isocodes Binary: r-cran-isocodes Architecture: source Version: 2017.09.27-1 Distribution: unstable Urgency: medium Maintainer: Debian Science TeamChanged-By: Sébastien Villemot Description: r-cran-isocodes - GNU R package providing tables for several ISO codes Changes: r-cran-isocodes (2017.09.27-1) unstable; urgency=medium . * New upstream version 2017.09.27 * Add d/missing-sources/iso_3166.R, used to generate some datasets. * Document *.rda files in README.source. Checksums-Sha1: f1783fe41dac80dd41262875807f6309440036d9 2128 r-cran-isocodes_2017.09.27-1.dsc 7a5f31f5d2fe6f2406930dedd13cdfcdb3d7ae41 194253 r-cran-isocodes_2017.09.27.orig.tar.gz de9e6b36cd2f1ff69d23823cf3f04c4e2364fb94 2528 r-cran-isocodes_2017.09.27-1.debian.tar.xz b115c4493da7f786f4ffbcf2cddc73f9d0249b58 8210 r-cran-isocodes_2017.09.27-1_amd64.buildinfo Checksums-Sha256: bc4d1999c5f25a4a0f91fea968ada2b4b06bda1122d2e24baae2fcd281b9 2128 r-cran-isocodes_2017.09.27-1.dsc 57b6c6e335075995d1b56801ed7b3c72b47284cd2fb66de29a8c7e0742b8cbda 194253 r-cran-isocodes_2017.09.27.orig.tar.gz 2df59f885ac47e6117062815f271b20e04ce19b9e254b055dd161be41d272661 2528 r-cran-isocodes_2017.09.27-1.debian.tar.xz a565662fc636278e1ba28c03471e858297127f76069acd5e561b2b0c1187e21b 8210 r-cran-isocodes_2017.09.27-1_amd64.buildinfo Files: 9fa26aef3bbe3aed8e17714fbcaf54ae 2128 gnu-r optional r-cran-isocodes_2017.09.27-1.dsc c0732f443ba18fed02ad0790cd28be52 194253 gnu-r optional r-cran-isocodes_2017.09.27.orig.tar.gz b4200334891d2fad5661f82e2310474e 2528 gnu-r optional r-cran-isocodes_2017.09.27-1.debian.tar.xz b82915a03addac3772c2da6e0be56ff2 8210 gnu-r optional r-cran-isocodes_2017.09.27-1_amd64.buildinfo -BEGIN PGP SIGNATURE- iQIzBAEBCAAdFiEEU5UdlScuDFuCvoxKLOzpNQ7OvkoFAlnhzhAACgkQLOzpNQ7O vkqYjw/+NwvDZIvKVbPAFqwEi/MhfR6YgGN1Cmgx7Hijxzlujdss/I0UKeconIpm v1GkE/tdJBAUnl8lARNxIUfnPS1wkc+V5DavGhqpxMasUj0dx6BSiaftLz/a6wH+ 2Fq5oXs7YJNs7pc0kITIIXg32c9EATCwIVnvWRgsYx4ylDByKwKVLFq1JTCw1B9w tGo7M2xWBSMesuQEg2zIXqUZP1PRwgAJObEqfZQeIurYpP9bdm/kyJ2LZrtj489v DrWtBO/+1sXrrAnJaQ4c2OzELz+23JYfLjLMhMz/qMgl/AUsoPSJGkCrw1Acae3z TQYVjT1W+syXaH6/IwYkDpPIA6Fp1DvPnACp6IXYgVPy9MW85xhNObWVISduR/k9 rO3+rYS9t9h8MiDaFjHa75wXNNWfnrrTKWgAjaRpLRUL1XB9umzegcdP4tc2QzfV fh/u7+NkIg1dLR/lf0UfOtIuFcggFXUKpb93Vbtrc15Wzf4w99LljJ67NQDdAv5u KTSL92QkQrjZCwFRI9HA3Fw79KeV5pFIub+JVMxn3Rzz+XJtnBv8jlU/AjazrHou cKcPx/8fmbzpKAKvpcLWoZjtpA8c/ggk1m26MwkhOe55vlKaVyVbWzt+VdcgmEYC 21SkowRPVI4dHkvzzMddS6rVXAKqrFDijF8Jmdnyx/RU21aIZq0= =2anH -END PGP SIGNATURE- Thank you for your contribution to Debian. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#877419: [Help] Exclusion did not worked (Was: Bug#877419: Bug#877700: RM: pandas [arm64 armel armhf mips mips64el mipsel s390x] ...)
On 14/10/17 07:54, Andreas Tille wrote: On Fri, Oct 13, 2017 at 08:00:36PM +0200, Andreas Tille wrote: I might try to pick some of the failed tests from the logs. I did so once with kind of iterative uploads for python-cogent package by checking the logs of the failing architectures. If you think the proper way would be to login to each single architecture and build there this would not fit into my time frame I'm willing to spent on this task. I treid to approach this by re-using the exclusion mechanism that was used before (but not activated) in the rules file of pandas[1]: diff --git a/debian/rules b/debian/rules index 286e36561..186ae36f1 100755 --- a/debian/rules +++ b/debian/rules @@ -24,17 +24,8 @@ UVER_PYSHORT := $(shell echo $(UVER_PY) | sed -e 's,+git.*,,g') MIN_CYTHONVER = 0.23 -ifneq ($(DEB_HOST_ARCH),amd64) - # obtained by grep -e 'ERROR:' -e 'FAIL:' pandas-sid.log |awk '{print $2;}' | sed -e 's,^test,,g' | tr '\n' '|' - # on log of failed tests on mips build box on pandas 0.19.2-1 - # Majority of them is probably due to a bug in NumPy https://github.com/numpy/numpy/issues/8325 - # of incorrectly treating NaT on non-amd64 platforms - # So for stretch release for now disabling those tests on non-amd64 -# plot ones are excluded due to seems to be a bug in matplotlib which shows up -# on s390 - # EXCLUDE_TESTS_ARCH := --exclude 'test(_frame_from_json_to_json|_misc_example|ArrayNumpyLabelled|DataFrameNumpyLabelled|_resample_timedelta_values|_timestamp_compare|_where_timedelta|ArrayNumpyExcept|_resample_datetime_values|_NaT_cast|_where_datetime|_where_datetime|_datetimelikes_nan|_value_counts_normalized|_agg_dict_parameter_cast_result_dtypes|_boxplot|_boxplot_vertical|_errorbar_plot|_hist_df|_line_area_stacked|_plot|_round_trip_valid_encodings)' -# Try without excludes now that we are so much in the future ;) - EXCLUDE_TESTS_ARCH := +ifeq ($(DEB_HOST_ARCH),$(filter $(DEB_HOST_ARCH), arm64 armel armhf mips mips64el mipsel s390x alpha hppa powerpc ppc64)) + EXCLUDE_TESTS_ARCH := --exclude 'test(test_value_counts_normalized|test_resample_timedelta_values|test_resample_datetime_values|test_datetimelikes_nan|test_where_datetime|test_timestamp_compare|test_agg_dict_parameter_cast_result_dtypes|test_NaT_cast|test_where_datetime|test_where_timedelta)' else EXCLUDE_TESTS_ARCH := endif Unfortunately this ends up in: ... pandas_datareader: None usage: pytest.py [options] [file_or_dir] [file_or_dir] [...] pytest.py: error: unrecognized arguments: --exclude inifile: /<>/setup.cfg rootdir: /<> debian/rules:109: recipe for target 'python-test2.7' failed ... I confirm that I have not found the --exclude option for pytest. I'm not that experienced with pytest. From some short research I had the idea to quilt patch some "slow" markers for the failing tests and for the affected architectures ignore those "slow" tests. Any better technical idea? Indeed you could use a custom "slow" marker for it. The corresponding patch should be upstreamable too if appropriately motivated. Ghis -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of r-cran-isocodes_2017.09.27-1_source.changes
r-cran-isocodes_2017.09.27-1_source.changes uploaded successfully to localhost along with the files: r-cran-isocodes_2017.09.27-1.dsc r-cran-isocodes_2017.09.27.orig.tar.gz r-cran-isocodes_2017.09.27-1.debian.tar.xz r-cran-isocodes_2017.09.27-1_amd64.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of theano_0.9.0+dfsg-1_multi.changes
theano_0.9.0+dfsg-1_multi.changes uploaded successfully to localhost along with the files: theano_0.9.0+dfsg-1.dsc theano_0.9.0+dfsg.orig.tar.gz theano_0.9.0+dfsg-1.debian.tar.xz python-theano_0.9.0+dfsg-1_amd64.deb python3-theano_0.9.0+dfsg-1_amd64.deb theano-doc_0.9.0+dfsg-1_all.deb theano_0.9.0+dfsg-1_amd64.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#877419: [Help] Exclusion did not worked (Was: Bug#877419: Bug#877700: RM: pandas [arm64 armel armhf mips mips64el mipsel s390x] ...)
On Fri, Oct 13, 2017 at 08:00:36PM +0200, Andreas Tille wrote: > > I might try to pick some of the failed tests from the logs. I did so > once with kind of iterative uploads for python-cogent package by > checking the logs of the failing architectures. If you think the proper > way would be to login to each single architecture and build there this > would not fit into my time frame I'm willing to spent on this task. I treid to approach this by re-using the exclusion mechanism that was used before (but not activated) in the rules file of pandas[1]: diff --git a/debian/rules b/debian/rules index 286e36561..186ae36f1 100755 --- a/debian/rules +++ b/debian/rules @@ -24,17 +24,8 @@ UVER_PYSHORT := $(shell echo $(UVER_PY) | sed -e 's,+git.*,,g') MIN_CYTHONVER = 0.23 -ifneq ($(DEB_HOST_ARCH),amd64) - # obtained by grep -e 'ERROR:' -e 'FAIL:' pandas-sid.log |awk '{print $2;}' | sed -e 's,^test,,g' | tr '\n' '|' - # on log of failed tests on mips build box on pandas 0.19.2-1 - # Majority of them is probably due to a bug in NumPy https://github.com/numpy/numpy/issues/8325 - # of incorrectly treating NaT on non-amd64 platforms - # So for stretch release for now disabling those tests on non-amd64 -# plot ones are excluded due to seems to be a bug in matplotlib which shows up -# on s390 - # EXCLUDE_TESTS_ARCH := --exclude 'test(_frame_from_json_to_json|_misc_example|ArrayNumpyLabelled|DataFrameNumpyLabelled|_resample_timedelta_values|_timestamp_compare|_where_timedelta|ArrayNumpyExcept|_resample_datetime_values|_NaT_cast|_where_datetime|_where_datetime|_datetimelikes_nan|_value_counts_normalized|_agg_dict_parameter_cast_result_dtypes|_boxplot|_boxplot_vertical|_errorbar_plot|_hist_df|_line_area_stacked|_plot|_round_trip_valid_encodings)' -# Try without excludes now that we are so much in the future ;) - EXCLUDE_TESTS_ARCH := +ifeq ($(DEB_HOST_ARCH),$(filter $(DEB_HOST_ARCH), arm64 armel armhf mips mips64el mipsel s390x alpha hppa powerpc ppc64)) + EXCLUDE_TESTS_ARCH := --exclude 'test(test_value_counts_normalized|test_resample_timedelta_values|test_resample_datetime_values|test_datetimelikes_nan|test_where_datetime|test_timestamp_compare|test_agg_dict_parameter_cast_result_dtypes|test_NaT_cast|test_where_datetime|test_where_timedelta)' else EXCLUDE_TESTS_ARCH := endif Unfortunately this ends up in: ... pandas_datareader: None usage: pytest.py [options] [file_or_dir] [file_or_dir] [...] pytest.py: error: unrecognized arguments: --exclude inifile: /<>/setup.cfg rootdir: /<> debian/rules:109: recipe for target 'python-test2.7' failed ... I confirm that I have not found the --exclude option for pytest. I'm not that experienced with pytest. From some short research I had the idea to quilt patch some "slow" markers for the failing tests and for the affected architectures ignore those "slow" tests. Any better technical idea? Kind regards Andreas. [1] https://anonscm.debian.org/git/debian-science/packages/pandas.git -- http://fam-tille.de -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers