lua-torch-xlua_0~20160719-g41308fe-6_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Tue, 13 Feb 2018 06:07:31 +
Source: lua-torch-xlua
Binary: lua-torch-xlua
Architecture: source
Version: 0~20160719-g41308fe-6
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Mo Zhou 
Description:
 lua-torch-xlua - Lua Extension Package for Torch Framework
Changes:
 lua-torch-xlua (0~20160719-g41308fe-6) unstable; urgency=medium
 .
   * Change Architecture back to all. Since i386 build was re-enabled
 by lua-torch-torch7, this time the package should be able to migrate.
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Accepted lua-torch-xlua 0~20160719-g41308fe-6 (source) into unstable

[Mo Zhou]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Tue, 13 Feb 2018 06:07:31 +
Source: lua-torch-xlua
Binary: lua-torch-xlua
Architecture: source
Version: 0~20160719-g41308fe-6
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Mo Zhou 
Description:
 lua-torch-xlua - Lua Extension Package for Torch Framework
Changes:
 lua-torch-xlua (0~20160719-g41308fe-6) unstable; urgency=medium
 .
   * Change Architecture back to all. Since i386 build was re-enabled
 by lua-torch-torch7, this time the package should be able to migrate.
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Processing of lua-torch-xlua_0~20160719-g41308fe-6_source.changes

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lua-torch-xlua_0~20160719-g41308fe-6_source.changes uploaded successfully to 
localhost
along with the files:
  lua-torch-xlua_0~20160719-g41308fe-6.dsc
  lua-torch-xlua_0~20160719-g41308fe-6.debian.tar.xz
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libquantum 1.1.1-5 MIGRATED to testing

[Debian testing watch]

FYI: The status of the libquantum source package
in Debian's testing distribution has changed.

  Previous version: 1.1.1-4
  Current version:  1.1.1-5

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neuron 7.5-1 MIGRATED to testing

[Debian testing watch]

FYI: The status of the neuron source package
in Debian's testing distribution has changed.

  Previous version: (not in testing)
  Current version:  7.5-1

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Accepted lua-torch-torch7 0~20170926-g89ede3b-2 (source) into unstable

[Mo Zhou]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Tue, 13 Feb 2018 02:51:38 +
Source: lua-torch-torch7
Binary: lua-torch-torch7 lua-torch-torch7-dev libtorch-th libtorch-th-dev 
libtorch-luat libtorch-luat-dev
Architecture: source
Version: 0~20170926-g89ede3b-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Mo Zhou 
Description:
 libtorch-luat - libluaT.so of Torch Package for Torch Framework
 libtorch-luat-dev - libluaT.so of Torch Package for Torch Framework (dev)
 libtorch-th - libTH.so of Torch Package for Torch Framework
 libtorch-th-dev - libTH.so of Torch Package for Torch Framework (dev)
 lua-torch-torch7 - Torch Package for Torch Framework
 lua-torch-torch7-dev - Torch Package for Torch Framework (dev)
Changes:
 lua-torch-torch7 (0~20170926-g89ede3b-2) unstable; urgency=medium
 .
   * Add patch to fix i386 build.
   * Enable build on i386. This unblocks migration of rdeps with Arch=all.
   * Bump debhelper compat level to 11.
   * Don't set DEB_HOST_{,MULTI}ARCH in rules.
   * Check DEB_BUILD_OPTIONS for overrided dh_auto_test target.
   * Use https URI in copyright.
   * Point Vcs-* fields to Salsa.
   * Bump Standards-Version to 4.1.3 (no change).
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lua-torch-torch7_0~20170926-g89ede3b-2_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Tue, 13 Feb 2018 02:51:38 +
Source: lua-torch-torch7
Binary: lua-torch-torch7 lua-torch-torch7-dev libtorch-th libtorch-th-dev 
libtorch-luat libtorch-luat-dev
Architecture: source
Version: 0~20170926-g89ede3b-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Mo Zhou 
Description:
 libtorch-luat - libluaT.so of Torch Package for Torch Framework
 libtorch-luat-dev - libluaT.so of Torch Package for Torch Framework (dev)
 libtorch-th - libTH.so of Torch Package for Torch Framework
 libtorch-th-dev - libTH.so of Torch Package for Torch Framework (dev)
 lua-torch-torch7 - Torch Package for Torch Framework
 lua-torch-torch7-dev - Torch Package for Torch Framework (dev)
Changes:
 lua-torch-torch7 (0~20170926-g89ede3b-2) unstable; urgency=medium
 .
   * Add patch to fix i386 build.
   * Enable build on i386. This unblocks migration of rdeps with Arch=all.
   * Bump debhelper compat level to 11.
   * Don't set DEB_HOST_{,MULTI}ARCH in rules.
   * Check DEB_BUILD_OPTIONS for overrided dh_auto_test target.
   * Use https URI in copyright.
   * Point Vcs-* fields to Salsa.
   * Bump Standards-Version to 4.1.3 (no change).
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Bug#890231: sagemath should use gdb, not gdb-python2, to be removed for buster

[Ximin Luo]

Ah, understood regarding gdb-python3.

sagemath uses cysignals-CSI from the cysignals-tools package to print out a 
more detailed backtrace containing native, cython and python code, when tests 
fail. 

cysignals-CSI starts gdb and writes the contents of cysignals-CSI-helper.py [1] 
into gdb. That script does things like "from Cython.Debugger import libpython, 
libcython". If gdb (instead of gdb-python2) is used then this fails with an 
error like:

Traceback (most recent call last):
  File "", line 26, in 
ModuleNotFoundError: No module named 'Cython'
Error while executing Python code.

because currently we only install cython for python2 when building sagemath. 
So, gdb's libpython3 can't find the Cython module.

After replacing gdb with gdb-python2 I get a nice Cython backtrace instead.

X

[1] The Debian package installs this file into 
/usr/lib/python3/dist-packages/cysignals_gdb/cysignals-CSI-helper.py but that 
is a Debian-specific innovation by the package maintainer that is slightly 
misleading; the file is just meant to be read into gdb rather than imported in 
a python program.

Matthias Klose:
> On 12.02.2018 15:41, Ximin Luo wrote:
>> Understood, but the entirety of sagemath is python2 at the moment and 
>> doesn't support python3 (upstream is working on it).
>>
>> What's the timeframe for removal of gdb-python2 and will there be a 
>> gdb-python3 alternative?
> 
> gdb is built using python3.  So maybe there is a misunderstanding, but how 
> does
> sagemath use python for debugging? Does it add it's own pretty printers so 
> that
> it needs python2? How is the gdb usage related to Python2?
> 


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sdformat_6.0.0+dfsg-2_amd64.changes is NEW

[Debian FTP Masters]

binary:libsdformat6 is NEW.
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[1]: https://ftp-master.debian.org/new.html
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Processing of sdformat_6.0.0+dfsg-2_amd64.changes

[Debian FTP Masters]

sdformat_6.0.0+dfsg-2_amd64.changes uploaded successfully to localhost
along with the files:
  sdformat_6.0.0+dfsg-2.dsc
  sdformat_6.0.0+dfsg-2.debian.tar.xz
  libsdformat6-dev_6.0.0+dfsg-2_amd64.deb
  libsdformat6_6.0.0+dfsg-2_amd64.deb
  sdformat-doc_6.0.0+dfsg-2_all.deb
  sdformat-sdf_6.0.0+dfsg-2_all.deb
  sdformat_6.0.0+dfsg-2_amd64.buildinfo

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Bug#890231: sagemath should use gdb, not gdb-python2, to be removed for buster

[Matthias Klose]

On 12.02.2018 15:41, Ximin Luo wrote:
> Understood, but the entirety of sagemath is python2 at the moment and doesn't 
> support python3 (upstream is working on it).
> 
> What's the timeframe for removal of gdb-python2 and will there be a 
> gdb-python3 alternative?

gdb is built using python3.  So maybe there is a misunderstanding, but how does
sagemath use python for debugging? Does it add it's own pretty printers so that
it needs python2? How is the gdb usage related to Python2?

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Bug#890278: scotch: Please add documentation

[Samuel Thibault]

Package: scotch
Version: 6.0.4.dfsg1-8
Severity: normal

Hello,

scotch 6.0.5 now includes the LaTeX source for the documentation, so
while packaging that version, please add rules to build and install it.

(cd doc/src/ptscotch && pdflatex p.tex && bibtex p && pdflatex p.tex && 
pdflatex p.tex)

(cd doc/src/scotch && pdflatex m.tex && pdflatex m.tex)

seem to be working fine.

Samuel

-- System Information:
Debian Release: buster/sid
  APT prefers testing
  APT policy: (990, 'testing'), (500, 'unstable-debug'), (500, 
'testing-debug'), (500, 'stable-debug'), (500, 'oldoldstable'), (500, 
'buildd-unstable'), (500, 'unstable'), (500, 'stable'), (500, 'oldstable'), (1, 
'experimental-debug'), (1, 'buildd-experimental'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.15.0 (SMP w/4 CPU cores)
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), 
LANGUAGE=fr_FR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages scotch depends on:
ii  libc6  2.26-4
ii  libopenmpi22.1.1-8
ii  libscotch-6.0  6.0.4.dfsg1-8
ii  zlib1g 1:1.2.8.dfsg-5

scotch recommends no packages.

scotch suggests no packages.

-- no debconf information

-- 
Samuel
***e trouve un .xls
***e passe un moment à se demander quelle version de xml c'est ça, le .xls
e: donc j'ai fait un file
 -+- #sos - on n'a pas forcément les mêmes références que tout le monde -+-

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Bug#890254: marked as done (gf2x: baseline violations on i386/amd64)

[Debian Bug Tracking System]

Your message dated Mon, 12 Feb 2018 17:49:10 +
with message-id 
and subject line Bug#890254: fixed in gf2x 1.2-4
has caused the Debian Bug report #890254,
regarding gf2x: baseline violations on i386/amd64
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
890254: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=890254
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: gf2x
Version: 1.1-2
Severity: serious
Control: affects -1 src:sagemath

A FTBFS in sagemath boiled down to gf2x violating
the amd64 baseline by building with
"-msse2 -msse3 -mssse3 -msse4.1 -mpclmul".

The same problem exists on i386 with
"-msse2 -msse3 -mssse3".

gf2x 1.1-2 has similar problems by building with
"-msse2 -mpclmul" if supported during the build,
and building with "-msse2" on i386.

gf2x must not ever set any of these flags
(-msse2 on amd64 is harmless since it is
 already enabled by default, but therefore
 also pointless).
--- End Message ---
--- Begin Message ---
Source: gf2x
Source-Version: 1.2-4

We believe that the bug you reported is fixed in the latest version of
gf2x, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 890...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ximin Luo  (supplier of updated gf2x package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Mon, 12 Feb 2018 18:26:47 +0100
Source: gf2x
Binary: libgf2x1 libgf2x-dev
Architecture: source
Version: 1.2-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ximin Luo 
Description:
 libgf2x-dev - Routines for fast arithmetic in GF(2)[x] (development files)
 libgf2x1   - Routines for fast arithmetic in GF(2)[x]
Closes: 890254
Changes:
 gf2x (1.2-4) unstable; urgency=medium
 .
   * Team upload.
   * Actually disable HW-specific code also on i386. (Closes: #890254)
Checksums-Sha1:
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Accepted gf2x 1.2-4 (source) into unstable

[Ximin Luo]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Mon, 12 Feb 2018 18:26:47 +0100
Source: gf2x
Binary: libgf2x1 libgf2x-dev
Architecture: source
Version: 1.2-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ximin Luo 
Description:
 libgf2x-dev - Routines for fast arithmetic in GF(2)[x] (development files)
 libgf2x1   - Routines for fast arithmetic in GF(2)[x]
Closes: 890254
Changes:
 gf2x (1.2-4) unstable; urgency=medium
 .
   * Team upload.
   * Actually disable HW-specific code also on i386. (Closes: #890254)
Checksums-Sha1:
 358990355ddb56845fbd4ac1011ee81f6262eb89 1994 gf2x_1.2-4.dsc
 177b85d451c395d7b6253639e19ae49f628db6b5 2884 gf2x_1.2-4.debian.tar.xz
 5e0c05609608b45e4617878dc5af4400ba1a93a1 5378 gf2x_1.2-4_source.buildinfo
Checksums-Sha256:
 457d365e70bb761d3deaceec080ef0c0c0f3edb2e16ac4e9728c0d0d65c96e0c 1994 
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gf2x_1.2-4.debian.tar.xz
 f3faa3f045f0a3334471cb4a3de114cf0e2484761332e16097953cfadbe66bec 5378 
gf2x_1.2-4_source.buildinfo
Files:
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 153ed98364e0f8d260df27648cf806dd 2884 math optional gf2x_1.2-4.debian.tar.xz
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gf2x_1.2-4_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Mon, 12 Feb 2018 18:26:47 +0100
Source: gf2x
Binary: libgf2x1 libgf2x-dev
Architecture: source
Version: 1.2-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ximin Luo 
Description:
 libgf2x-dev - Routines for fast arithmetic in GF(2)[x] (development files)
 libgf2x1   - Routines for fast arithmetic in GF(2)[x]
Closes: 890254
Changes:
 gf2x (1.2-4) unstable; urgency=medium
 .
   * Team upload.
   * Actually disable HW-specific code also on i386. (Closes: #890254)
Checksums-Sha1:
 358990355ddb56845fbd4ac1011ee81f6262eb89 1994 gf2x_1.2-4.dsc
 177b85d451c395d7b6253639e19ae49f628db6b5 2884 gf2x_1.2-4.debian.tar.xz
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Checksums-Sha256:
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gf2x_1.2-4_source.buildinfo
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Processing of gf2x_1.2-4_source.changes

[Debian FTP Masters]

gf2x_1.2-4_source.changes uploaded successfully to localhost
along with the files:
  gf2x_1.2-4.dsc
  gf2x_1.2-4.debian.tar.xz
  gf2x_1.2-4_source.buildinfo

Greetings,

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Processed: [bts-link] source package src:morse-simulator

[Debian Bug Tracking System]

Processing commands for cont...@bugs.debian.org:

> #
> # bts-link upstream status pull for source package src:morse-simulator
> # see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html
> #
> user bts-link-upstr...@lists.alioth.debian.org
Setting user to bts-link-upstr...@lists.alioth.debian.org (was 
bts-link-de...@lists.alioth.debian.org).
> # remote status report for #853557 (http://bugs.debian.org/853557)
> # Bug title: morse-simulator FTBFS: ImportError: No module named 'version'
> #  * https://github.com/morse-simulator/morse/pull/766
> #  * remote status changed: open -> closed
> #  * closed upstream
> tags 853557 + fixed-upstream
Bug #853557 [src:morse-simulator] morse-simulator FTBFS: ImportError: No module 
named 'version'
Bug #867496 [src:morse-simulator] morse-simulator FTBFS: ImportError: No module 
named 'version'
Added tag(s) fixed-upstream.
Added tag(s) fixed-upstream.
> usertags 853557 - status-open
Usertags were: status-open.
Usertags are now: .
> usertags 853557 + status-closed
There were no usertags set.
Usertags are now: status-closed.
> # remote status report for #867496 (http://bugs.debian.org/867496)
> # Bug title: morse-simulator FTBFS: ImportError: No module named 'version'
> #  * https://github.com/morse-simulator/morse/pull/766
> #  * remote status changed: open -> closed
> #  * closed upstream
> tags 867496 + fixed-upstream
Bug #867496 [src:morse-simulator] morse-simulator FTBFS: ImportError: No module 
named 'version'
Bug #853557 [src:morse-simulator] morse-simulator FTBFS: ImportError: No module 
named 'version'
Ignoring request to alter tags of bug #867496 to the same tags previously set
Ignoring request to alter tags of bug #853557 to the same tags previously set
> usertags 867496 - status-open
Usertags were: status-open.
Usertags are now: .
> usertags 867496 + status-closed
There were no usertags set.
Usertags are now: status-closed.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
853557: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853557
867496: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=867496
Debian Bug Tracking System
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Processed: [bts-link] source package src:opencv

[Debian Bug Tracking System]

Processing commands for cont...@bugs.debian.org:

> #
> # bts-link upstream status pull for source package src:opencv
> # see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html
> #
> user bts-link-upstr...@lists.alioth.debian.org
Setting user to bts-link-upstr...@lists.alioth.debian.org (was 
bts-link-de...@lists.alioth.debian.org).
> # remote status report for #886674 (http://bugs.debian.org/886674)
> # Bug title: opencv: CVE-2018-5268
> #  * https://github.com/opencv/opencv/issues/10541
> #  * remote status changed: (?) -> closed
> #  * closed upstream
> tags 886674 + fixed-upstream
Bug #886674 [src:opencv] opencv: CVE-2018-5268
Added tag(s) fixed-upstream.
> usertags 886674 + status-closed
There were no usertags set.
Usertags are now: status-closed.
> # remote status report for #886675 (http://bugs.debian.org/886675)
> # Bug title: opencv: CVE-2018-5269
> #  * https://github.com/opencv/opencv/issues/10540
> #  * remote status changed: (?) -> closed
> #  * closed upstream
> tags 886675 + fixed-upstream
Bug #886675 [src:opencv] opencv: CVE-2018-5269
Added tag(s) fixed-upstream.
> usertags 886675 + status-closed
There were no usertags set.
Usertags are now: status-closed.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
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[bts-link] source package src:graywolf

[bts-link-upstream]

#
# bts-link upstream status pull for source package src:graywolf
# see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html
#

user bts-link-upstr...@lists.alioth.debian.org

# remote status report for #887760 (http://bugs.debian.org/887760)
# Bug title: graywolf FTBFS with glibc 2.26
#  * https://github.com/rubund/graywolf/issues/16
#  * remote status changed: (?) -> closed
usertags 887760 + status-closed

thanks

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[bts-link] source package src:morse-simulator

[bts-link-upstream]

#
# bts-link upstream status pull for source package src:morse-simulator
# see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html
#

user bts-link-upstr...@lists.alioth.debian.org

# remote status report for #853557 (http://bugs.debian.org/853557)
# Bug title: morse-simulator FTBFS: ImportError: No module named 'version'
#  * https://github.com/morse-simulator/morse/pull/766
#  * remote status changed: open -> closed
#  * closed upstream
tags 853557 + fixed-upstream
usertags 853557 - status-open
usertags 853557 + status-closed

# remote status report for #867496 (http://bugs.debian.org/867496)
# Bug title: morse-simulator FTBFS: ImportError: No module named 'version'
#  * https://github.com/morse-simulator/morse/pull/766
#  * remote status changed: open -> closed
#  * closed upstream
tags 867496 + fixed-upstream
usertags 867496 - status-open
usertags 867496 + status-closed

thanks

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[bts-link] source package src:opencv

[bts-link-upstream]

#
# bts-link upstream status pull for source package src:opencv
# see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html
#

user bts-link-upstr...@lists.alioth.debian.org

# remote status report for #886674 (http://bugs.debian.org/886674)
# Bug title: opencv: CVE-2018-5268
#  * https://github.com/opencv/opencv/issues/10541
#  * remote status changed: (?) -> closed
#  * closed upstream
tags 886674 + fixed-upstream
usertags 886674 + status-closed

# remote status report for #886675 (http://bugs.debian.org/886675)
# Bug title: opencv: CVE-2018-5269
#  * https://github.com/opencv/opencv/issues/10540
#  * remote status changed: (?) -> closed
#  * closed upstream
tags 886675 + fixed-upstream
usertags 886675 + status-closed

thanks

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Processed: notfixed 890254 in 1.2-3

[Debian Bug Tracking System]

Processing commands for cont...@bugs.debian.org:

> notfixed 890254 1.2-3
Bug #890254 [src:gf2x] gf2x: baseline violations on i386/amd64
No longer marked as fixed in versions gf2x/1.2-3.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
890254: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=890254
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

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Bug#890254: control

[Adrian Bunk]

Control: not fixed -1 1.2-3

On Mon, Feb 12, 2018 at 02:14:00PM +, Ximin Luo wrote:
> Control: fixed -1 1.2-3
> 
> Already fixed there, version in stretch still affected.

That only fixed it for amd64, i386 still builds with -msse2:
https://buildd.debian.org/status/fetch.php?pkg=gf2x=i386=1.2-3=1518451597=0

> X

cu
Adrian

-- 

   "Is there not promise of rain?" Ling Tan asked suddenly out
of the darkness. There had been need of rain for many days.
   "Only a promise," Lao Er said.
   Pearl S. Buck - Dragon Seed

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yorick_2.2.04+dfsg1-7_amd64.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 07 Feb 2018 10:45:31 +0100
Source: yorick
Binary: yorick yorick-data yorick-dev yorick-mpy-mpich2 yorick-mpy-openmpi 
yorick-mpy-common yorick-doc yorick-full
Architecture: source all amd64
Version: 2.2.04+dfsg1-7
Distribution: unstable
Urgency: low
Maintainer: Debian Science Maintainers 

Changed-By: Thibaut Paumard 
Description:
 yorick - interpreted language and scientific graphics
 yorick-data - interpreted library for the Yorick language
 yorick-dev - development files for the Yorick interpreted language
 yorick-doc - documentation for the Yorick interpreted language
 yorick-full - full installation of the Yorick interpreter and add-ons
 yorick-mpy-common - Message Passing Yorick (common files)
 yorick-mpy-mpich2 - Message Passing Yorick (MPICH2 build)
 yorick-mpy-openmpi - Message Passing Yorick (OpenMPI build)
Changes:
 yorick (2.2.04+dfsg1-7) unstable; urgency=low
 .
   * Move YAO and Spydr from Depends to Suggests of yorick-full, because
 they both depend on python-gtk which is deprecated.
   * Bump debhelper compat version to 10.
Checksums-Sha1:
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yorick_2.2.04+dfsg1-7.debian.tar.xz
 bab6d3f4765828c8fe680f67a34d39fd456c7190 495440 
yorick-data_2.2.04+dfsg1-7_all.deb
 9af144122f399f7b9c029edbf41dc5f3bc558d4d 1490708 
yorick-dbgsym_2.2.04+dfsg1-7_amd64.deb
 26120777028d5a19690cf8a222c81e7640555fc4 19068 
yorick-dev-dbgsym_2.2.04+dfsg1-7_amd64.deb
 55ceb37d5cf91f48ea1516935677731f31da5fe9 638200 
yorick-dev_2.2.04+dfsg1-7_amd64.deb
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yorick-doc_2.2.04+dfsg1-7_all.deb
 bfddcabdef54ac292b2b4eae5fe20dbc5d4dd244 10504 
yorick-full_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-common_2.2.04+dfsg1-7_all.deb
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yorick-mpy-mpich2-dbgsym_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-mpich2_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-openmpi-dbgsym_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-openmpi_2.2.04+dfsg1-7_amd64.deb
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yorick_2.2.04+dfsg1-7_amd64.buildinfo
 57e97a56277d5956296e95126a460e2cac1d2301 690700 yorick_2.2.04+dfsg1-7_amd64.deb
Checksums-Sha256:
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yorick_2.2.04+dfsg1-7.dsc
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yorick_2.2.04+dfsg1-7.debian.tar.xz
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yorick-data_2.2.04+dfsg1-7_all.deb
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yorick-dbgsym_2.2.04+dfsg1-7_amd64.deb
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yorick-dev-dbgsym_2.2.04+dfsg1-7_amd64.deb
 6ef21b34634eea3d71d5c8740596a56e629f73b3355b680a025bc8826f89baec 638200 
yorick-dev_2.2.04+dfsg1-7_amd64.deb
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yorick-doc_2.2.04+dfsg1-7_all.deb
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yorick-full_2.2.04+dfsg1-7_amd64.deb
 124f48a15bcb3f1494a094eb7122d828e2e8dc3be9c438a32a50f95ce04b323f 32732 
yorick-mpy-common_2.2.04+dfsg1-7_all.deb
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yorick-mpy-mpich2-dbgsym_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-mpich2_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-openmpi-dbgsym_2.2.04+dfsg1-7_amd64.deb
 aa2646cef96fa5d6c48b2f24d070444389c02cfc0b57f674685e5f01a36754ff 520628 
yorick-mpy-openmpi_2.2.04+dfsg1-7_amd64.deb
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yorick_2.2.04+dfsg1-7_amd64.buildinfo
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yorick_2.2.04+dfsg1-7_amd64.deb
Files:
 d8b4f93117a105b08b6a786c2e10e11e 3214 science optional 
yorick_2.2.04+dfsg1-7.dsc
 1b4021e07e8b7fdcf385368543e6e2ae 34856 science optional 
yorick_2.2.04+dfsg1-7.debian.tar.xz
 b7eb4e29c55304d933342b846d2e0d8e 495440 science optional 
yorick-data_2.2.04+dfsg1-7_all.deb
 3a7624dd3f9af735e096e8eecabe7832 1490708 debug optional 
yorick-dbgsym_2.2.04+dfsg1-7_amd64.deb
 2481872bb48cf7a1865b8a329aa6789e 19068 debug optional 
yorick-dev-dbgsym_2.2.04+dfsg1-7_amd64.deb
 d240068b0eaa25369db57eb407f7298f 638200 science optional 
yorick-dev_2.2.04+dfsg1-7_amd64.deb
 4684b6ccfbbedf015bbd1a13ad820f6d 853564 doc optional 
yorick-doc_2.2.04+dfsg1-7_all.deb
 e18392be92be4c395f6c060028bb7c84 10504 science optional 

Accepted yorick 2.2.04+dfsg1-7 (source all amd64) into unstable

[Thibaut Paumard]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 07 Feb 2018 10:45:31 +0100
Source: yorick
Binary: yorick yorick-data yorick-dev yorick-mpy-mpich2 yorick-mpy-openmpi 
yorick-mpy-common yorick-doc yorick-full
Architecture: source all amd64
Version: 2.2.04+dfsg1-7
Distribution: unstable
Urgency: low
Maintainer: Debian Science Maintainers 

Changed-By: Thibaut Paumard 
Description:
 yorick - interpreted language and scientific graphics
 yorick-data - interpreted library for the Yorick language
 yorick-dev - development files for the Yorick interpreted language
 yorick-doc - documentation for the Yorick interpreted language
 yorick-full - full installation of the Yorick interpreter and add-ons
 yorick-mpy-common - Message Passing Yorick (common files)
 yorick-mpy-mpich2 - Message Passing Yorick (MPICH2 build)
 yorick-mpy-openmpi - Message Passing Yorick (OpenMPI build)
Changes:
 yorick (2.2.04+dfsg1-7) unstable; urgency=low
 .
   * Move YAO and Spydr from Depends to Suggests of yorick-full, because
 they both depend on python-gtk which is deprecated.
   * Bump debhelper compat version to 10.
Checksums-Sha1:
 bda5e263355a2c92b8672f246e1a34f18896e57a 3214 yorick_2.2.04+dfsg1-7.dsc
 28b933b01cf036466cab319b96378bb99c2b8953 34856 
yorick_2.2.04+dfsg1-7.debian.tar.xz
 bab6d3f4765828c8fe680f67a34d39fd456c7190 495440 
yorick-data_2.2.04+dfsg1-7_all.deb
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yorick-dbgsym_2.2.04+dfsg1-7_amd64.deb
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yorick-dev-dbgsym_2.2.04+dfsg1-7_amd64.deb
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yorick-dev_2.2.04+dfsg1-7_amd64.deb
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yorick-doc_2.2.04+dfsg1-7_all.deb
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yorick-full_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-common_2.2.04+dfsg1-7_all.deb
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yorick-mpy-mpich2-dbgsym_2.2.04+dfsg1-7_amd64.deb
 d7738bd13090f24b673eeddcef66426f45b05e5e 520404 
yorick-mpy-mpich2_2.2.04+dfsg1-7_amd64.deb
 fb4936fcc4f223459f24b29a7c2e5d8e6e9f 1102444 
yorick-mpy-openmpi-dbgsym_2.2.04+dfsg1-7_amd64.deb
 0e9458f824586d06354c73b4f5765d78579f387b 520628 
yorick-mpy-openmpi_2.2.04+dfsg1-7_amd64.deb
 1e0176551380f1d6dcd1e09bc81211aaa8553678 12272 
yorick_2.2.04+dfsg1-7_amd64.buildinfo
 57e97a56277d5956296e95126a460e2cac1d2301 690700 yorick_2.2.04+dfsg1-7_amd64.deb
Checksums-Sha256:
 144cc22027253c5cf2e10f927c789fcb2b9cb0197665d8df502c3176e46507fc 3214 
yorick_2.2.04+dfsg1-7.dsc
 efb399edca6eaa2c526312f17f29d57405fbcc1b866794c7115df874980a0fdc 34856 
yorick_2.2.04+dfsg1-7.debian.tar.xz
 313db46ae97073ca2053f3b82b8d5137c0070aa4d17fe8109c112f798d189e04 495440 
yorick-data_2.2.04+dfsg1-7_all.deb
 b40b36324d5539dc9c2bd463eb997db768ba0f35b684c183df2e2150143535b2 1490708 
yorick-dbgsym_2.2.04+dfsg1-7_amd64.deb
 f78693df1637b921fc83afa1d53fd8c8d2dfbb29d044d37c91cb1802bc80c803 19068 
yorick-dev-dbgsym_2.2.04+dfsg1-7_amd64.deb
 6ef21b34634eea3d71d5c8740596a56e629f73b3355b680a025bc8826f89baec 638200 
yorick-dev_2.2.04+dfsg1-7_amd64.deb
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yorick-doc_2.2.04+dfsg1-7_all.deb
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yorick-full_2.2.04+dfsg1-7_amd64.deb
 124f48a15bcb3f1494a094eb7122d828e2e8dc3be9c438a32a50f95ce04b323f 32732 
yorick-mpy-common_2.2.04+dfsg1-7_all.deb
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yorick-mpy-mpich2-dbgsym_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-mpich2_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-openmpi-dbgsym_2.2.04+dfsg1-7_amd64.deb
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yorick-mpy-openmpi_2.2.04+dfsg1-7_amd64.deb
 e9ace293dd5f81de9467d0e4c1e2a01be7f01467b24c5e42acd48210169730aa 12272 
yorick_2.2.04+dfsg1-7_amd64.buildinfo
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yorick_2.2.04+dfsg1-7_amd64.deb
Files:
 d8b4f93117a105b08b6a786c2e10e11e 3214 science optional 
yorick_2.2.04+dfsg1-7.dsc
 1b4021e07e8b7fdcf385368543e6e2ae 34856 science optional 
yorick_2.2.04+dfsg1-7.debian.tar.xz
 b7eb4e29c55304d933342b846d2e0d8e 495440 science optional 
yorick-data_2.2.04+dfsg1-7_all.deb
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yorick-dbgsym_2.2.04+dfsg1-7_amd64.deb
 2481872bb48cf7a1865b8a329aa6789e 19068 debug optional 
yorick-dev-dbgsym_2.2.04+dfsg1-7_amd64.deb
 d240068b0eaa25369db57eb407f7298f 638200 science optional 
yorick-dev_2.2.04+dfsg1-7_amd64.deb
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yorick-doc_2.2.04+dfsg1-7_all.deb
 e18392be92be4c395f6c060028bb7c84 10504 science optional 

Accepted gf2x 1.2-3 (source) into unstable

[Ximin Luo]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Mon, 12 Feb 2018 14:39:24 +0100
Source: gf2x
Binary: libgf2x1 libgf2x-dev
Architecture: source
Version: 1.2-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ximin Luo 
Description:
 libgf2x-dev - Routines for fast arithmetic in GF(2)[x] (development files)
 libgf2x1   - Routines for fast arithmetic in GF(2)[x]
Changes:
 gf2x (1.2-3) unstable; urgency=medium
 .
   * Team upload.
   * Actually disable HW-specific code.
Checksums-Sha1:
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Checksums-Sha256:
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gf2x_1.2-3.dsc
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gf2x_1.2-3.debian.tar.xz
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gf2x_1.2-3_source.buildinfo
Files:
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gf2x_1.2-3_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Mon, 12 Feb 2018 14:39:24 +0100
Source: gf2x
Binary: libgf2x1 libgf2x-dev
Architecture: source
Version: 1.2-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ximin Luo 
Description:
 libgf2x-dev - Routines for fast arithmetic in GF(2)[x] (development files)
 libgf2x1   - Routines for fast arithmetic in GF(2)[x]
Changes:
 gf2x (1.2-3) unstable; urgency=medium
 .
   * Team upload.
   * Actually disable HW-specific code.
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Thank you for your contribution to Debian.

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Bug#890231: sagemath should use gdb, not gdb-python2, to be removed for buster

[Ximin Luo]

Understood, but the entirety of sagemath is python2 at the moment and doesn't 
support python3 (upstream is working on it).

What's the timeframe for removal of gdb-python2 and will there be a gdb-python3 
alternative?

X

Matthias Klose:
> Package: src:sagemath
> Version: 8.2-3
> Severity: important
> Tags: sid buster
> 
> sagemath should use gdb, not gdb-python2, to be removed for buster.  Please
> don't introduce new python2 (build) dependencies.
> 


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Bug#890254: control

[Ximin Luo]

Control: fixed -1 1.2-3

Already fixed there, version in stretch still affected.

X

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Processed: control

[Debian Bug Tracking System]

Processing control commands:

> fixed -1 1.2-3
Bug #890254 [src:gf2x] gf2x: baseline violations on i386/amd64
The source 'gf2x' and version '1.2-3' do not appear to match any binary packages
Marked as fixed in versions gf2x/1.2-3.

-- 
890254: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=890254
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Bug#890254: gf2x: baseline violations on i386/amd64

[Adrian Bunk]

Source: gf2x
Version: 1.1-2
Severity: serious
Control: affects -1 src:sagemath

A FTBFS in sagemath boiled down to gf2x violating
the amd64 baseline by building with
"-msse2 -msse3 -mssse3 -msse4.1 -mpclmul".

The same problem exists on i386 with
"-msse2 -msse3 -mssse3".

gf2x 1.1-2 has similar problems by building with
"-msse2 -mpclmul" if supported during the build,
and building with "-msse2" on i386.

gf2x must not ever set any of these flags
(-msse2 on amd64 is harmless since it is
 already enabled by default, but therefore
 also pointless).

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Processed: gf2x: baseline violations on i386/amd64

[Debian Bug Tracking System]

Processing control commands:

> affects -1 src:sagemath
Bug #890254 [src:gf2x] gf2x: baseline violations on i386/amd64
Added indication that 890254 affects src:sagemath

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Processing of yorick_2.2.04+dfsg1-7_amd64.changes

[Debian FTP Masters]

yorick_2.2.04+dfsg1-7_amd64.changes uploaded successfully to localhost
along with the files:
  yorick_2.2.04+dfsg1-7.dsc
  yorick_2.2.04+dfsg1-7.debian.tar.xz
  yorick-data_2.2.04+dfsg1-7_all.deb
  yorick-dbgsym_2.2.04+dfsg1-7_amd64.deb
  yorick-dev-dbgsym_2.2.04+dfsg1-7_amd64.deb
  yorick-dev_2.2.04+dfsg1-7_amd64.deb
  yorick-doc_2.2.04+dfsg1-7_all.deb
  yorick-full_2.2.04+dfsg1-7_amd64.deb
  yorick-mpy-common_2.2.04+dfsg1-7_all.deb
  yorick-mpy-mpich2-dbgsym_2.2.04+dfsg1-7_amd64.deb
  yorick-mpy-mpich2_2.2.04+dfsg1-7_amd64.deb
  yorick-mpy-openmpi-dbgsym_2.2.04+dfsg1-7_amd64.deb
  yorick-mpy-openmpi_2.2.04+dfsg1-7_amd64.deb
  yorick_2.2.04+dfsg1-7_amd64.buildinfo
  yorick_2.2.04+dfsg1-7_amd64.deb

Greetings,

Your Debian queue daemon (running on host usper.debian.org)

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Processing of gf2x_1.2-3_source.changes

[Debian FTP Masters]

gf2x_1.2-3_source.changes uploaded successfully to localhost
along with the files:
  gf2x_1.2-3.dsc
  gf2x_1.2-3.debian.tar.xz
  gf2x_1.2-3_source.buildinfo

Greetings,

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Re: Maintaining a package (JASP)

[Boris Pek]

Hi Joris,

> I am a member of the core team of JASP, we develop a GPL'd statistics
> program that aims to replace SPSS while adding bayesian statics to the mix.
> We would like to make this as widely available as possible and therefore
> would like to contribute it to the debian repositories.
>
> To this end I have entered an intent-to-package in the wnpp
> (https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=887598) and tried to
> make the software adhere to the standards set by debian-policy.
>
> To actually get it into the repositories we would need to have a sponsor
> is what i've understood. Maybe there is someone in the debian-science team
> that would be willing to assist somewhat in that field?

Use mailing list [1] for discussions with team members. Some info about
joining to Debian Science team you may find at [2]. Also have in mind that
git repositories for our packages were recently moved from Alioth [3][4] to
Salsa [5], and I am not sure that our documentation have been updated...

[1] 
[2] https://wiki.debian.org/DebianScience#How_to_join
[3] https://alioth.debian.org/projects/debian-science/
[4] https://anonscm.debian.org/cgit/debian-science/
[5] https://salsa.debian.org/science-team

Best wishes,
Boris


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Maintaining a package (JASP)

[jo...@jorisgoosen.nl]

Hello all,

I am a member of the core team of JASP, we develop a GPL'd statistics
program that aims to replace SPSS while adding bayesian statics to the mix.
We would like to make this as widely available as possible and therefore
would like to contribute it to the debian repositories.

To this end I have entered an intent-to-package in the wnpp (
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=887598) and tried to make
the software adhere to the standards set by debian-policy.

To actually get it into the repositories we would need to have a sponsor is
what i've understood. Maybe there is someone in the debian-science team
that would be willing to assist somewhat in that field?

Best regards,
Joris Goosen
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Bug#890237: yade FTBFS on mips/mipsel: virtual memory exhausted: Cannot allocate memory

[Adrian Bunk]

Source: yade
Version: 2018.02a-2
Severity: important
Tags: patch

https://buildd.debian.org/status/package.php?p=yade

...
virtual memory exhausted: Cannot allocate memory
CMakeFiles/yade.dir/build.make:521: recipe for target 
'CMakeFiles/yade.dir/pkg/common/Cylinder.cpp.o' failed
make[3]: *** [CMakeFiles/yade.dir/pkg/common/Cylinder.cpp.o] Error 1


Fix:

--- debian/rules.old2018-02-11 13:26:34.803924197 +
+++ debian/rules2018-02-11 13:29:11.853915345 +
@@ -1,4 +1,7 @@
 #!/usr/bin/make -f
+
+include /usr/share/dpkg/architecture.mk
+
 BUILDDIR = $(CURDIR)/debian/build
 tmpInstall = $(CURDIR)/debian/tmp
 tmpDirMatplotLib = $(CURDIR)/debian/matplotlib
@@ -8,6 +11,12 @@
 
 export DEB_LDFLAGS_MAINT_APPEND = -Wl,--as-needed,-no-keep-memory
 
+# less debug info to avoid running
+# out of address space when linking
+ifneq (,$(filter $(DEB_HOST_ARCH), mips mipsel))
+  export DEB_CXXFLAGS_MAINT_APPEND += -g1
+endif
+
 # Check, whether Build-Depends-Indep are installed
 BUILD_DOC=$(shell dpkg -s python-sphinx | grep -q "^Status:.* installed$$" && 
echo yes)
 

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ignition-common_1.0.1-1_amd64.changes ACCEPTED into unstable, unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 05 Feb 2018 16:10:10 +
Source: ignition-common
Binary: libignition-common libignition-common-dev
Architecture: source amd64
Version: 1.0.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Jose Luis Rivero 
Description:
 libignition-common - Collection of useful code used by robotics apps - Shared 
library
 libignition-common-dev - Collection of useful code used by robotics apps - Dev 
files
Closes: 832806
Changes:
 ignition-common (1.0.1-1) unstable; urgency=medium
 .
   * Imported Upstream version 0.1.0
 (Closes: #832806)
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ignition-common_1.0.1-1.debian.tar.xz
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libignition-common-dbgsym_1.0.1-1_amd64.deb
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libignition-common-dev_1.0.1-1_amd64.deb
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Thank you for your contribution to Debian.

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Bug#890231: sagemath should use gdb, not gdb-python2, to be removed for buster

[Matthias Klose]

Package: src:sagemath
Version: 8.2-3
Severity: important
Tags: sid buster

sagemath should use gdb, not gdb-python2, to be removed for buster.  Please
don't introduce new python2 (build) dependencies.

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