Re: vtk7_7.1.1+dfsg1-1~exp1_amd64.changes REJECTED
Hi Gert et al., Thanks again for re-uploading; I have just ACCEPTed it. > [I] replicated here what I did, kind of to acknowledge the review and > the changes it required (a habit from scinetific paper reviews, nothing > more) Thanks! I was mostly making sure for next time; it is a good habit to be applauded. Best wishes, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: vtk7_7.1.1+dfsg1-1~exp1_amd64.changes REJECTED
Hi Gert, > > The comments were listed as being "for" version 7.1.1+dfsg1-1~exp1 — > > did you upload with the same version number? That would explain why I > > thought they remained unaddressed. > > Yes, I did upload with the same version. The policy is not clear about > this Oh, this has nothing to do with any policy, more that it this time I got confused. > Regarding the reported problems: Thank you for sharing these, but please could you add such things to your debian/copyright instead of here? The ftpmaster mailbox is a poor place for them to be recorded as they are not only entire hidden from the rest of the Project, they cannot be seen by our downstream distributions nor anyone doing an entirely separate audit. :) Thanks for re-uploading. Best wishes, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: Comments regarding vnlog_1.5-1_amd64.changes
Dima, > Hi. Thanks for pushing this through NEW so quickly. I acknowledge Chris > Venter's copyright in the README. What would you suggest for a better > attribution? Just add that he is the author? I mean, just to give some kind of credit... Best wishes, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding vnlog_1.5-1_amd64.changes
Hi, would be nice to attribute credit to Chris Venter for b64_encode.c, even if not necessary :) -- Chris Lamb <la...@debian.org> Sun, 01 Apr 2018 10:09:43 + -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: vtk7_7.1.1+dfsg1-1~exp1_amd64.changes REJECTED
Hi all, > these are the comments I got last year The comments were listed as being "for" version 7.1.1+dfsg1-1~exp1 — did you upload with the same version number? That would explain why I thought they remained unaddressed. If so, please re-upload and ping me and I will happily take a look. :) Best wishes, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
vtk7_7.1.1+dfsg1-1~exp1_amd64.changes REJECTED
Forwarding notes, please include Luca in any reply. See, also:
Thu 29 16:38 < mapreri> lamby: can I ask you to either *) forward me the
comments and I'll see what to do next *) accept and open a bunch of RC bugs
as needed *) plain reject with those comments. Whatever feels more sensible
for you in this case (guess it depends on what the comments say…)
-- Chris Lamb <la...@debian.org> Thu, 29 Mar 2018 15:40:20 +
Author: Luca Falavigna
Version: 7.1.1+dfsg1-1~exp1
Timestamp: 2017-09-01 21:05:53.165364+00:00
* Accelerators/Dax/* have different copyright terms than the one mentioned in
d/copyright
* Please mention license of the font under Charts/Core/Testing/Data/Fonts
* Common/Core/CaseFolding.txt is licensed under
http://www.unicode.org/copyright.html
* Examples/GUI/QT/* are copyright Sandia Corp. and have different licensing
terms
* Same as above applies for
Examples/Infovis/Cxx/{CustomLinkView,EasyView,StatsView}
* Same as above applies for Examples/Statistics/*
* Same as above applies for
Infovis/Layout/{vtkCosmicTreeLayoutStrategy.h,vtkTreeOrbitLayoutStrategy.h}
* Rendering/VolumeOpenGL/vtkHAVSVolumeMapper* are copyright University of Utah
===
Please feel free to respond to this email if you don't understand why
your files were rejected, or if you upload new files which address our
concerns.
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Bug#892019: python-meshio: Installs test files to /usr/lib/python3/dist-packages
Source: python-meshio
Version: 1.11.7-1
Severity: serious
Tags: patch
User: reproducible-bui...@lists.alioth.debian.org
Usertags: randomness
X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org
Hi,
Whilst working on the Reproducible Builds effort [0], we noticed
that python-meshio installs test files to /usr/lib/python3/dist-packages,
for example:
/usr/lib/python3/dist-packages/test.med
Patch attached. These were found as the files vary between runs.
[0] https://reproducible-builds.org/
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
--- a/debian/rules 2018-03-04 08:29:37.637307710 +
--- b/debian/rules 2018-03-04 08:43:11.509093514 +
@@ -6,6 +6,9 @@
export PYBUILD_NAME=meshio
export PYBUILD_DESTDIR_python3=debian/python3-$(PYBUILD_NAME)
+# Don't install files generated by the testsuite.
+export PYBUILD_AFTER_TEST := find {build_dir} -type f -maxdepth 1 -delete
+
%:
dh $@ --with python3 --buildsystem=pybuild
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Bug#891264: shark: please make the build reproducible
Source: shark Version: 3.1.4+ds1-1 Severity: wishlist Tags: patch User: reproducible-bui...@lists.alioth.debian.org Usertags: buildpath X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org Hi, Whilst working on the Reproducible Builds effort [0], we noticed that shark could not be built reproducibly. This is because it includes the full path to the original source in "TODO" entries in docs. Patch attached that disables this `todo_link_only` [1]. [0] https://reproducible-builds.org/ [1] https://sources.debian.org/src/sphinx/1.6.6-1/sphinx/ext/todo.py/#L151-L159 Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- diff --git a/doc/sphinx_pages/conf.py.in b/doc/sphinx_pages/conf.py.in index fd86bf9..f49ba52 100644 --- a/doc/sphinx_pages/conf.py.in +++ b/doc/sphinx_pages/conf.py.in @@ -13,6 +13,7 @@ mathjax_path = 'http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS- #delay nicked from https://groups.google.com/forum/#!msg/mathjax-users/J-36V22-G9Q/AW3ncCbJzS8J todo_include_todos = True +todo_link_only = True #set up doxylink tag file print 'current working directory', os.path.abspath(os.path.curdir) -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#891075: clfft: please make the build (partly) reproducible
Source: clfft Version: 2.12.2-1 Severity: wishlist Tags: patch User: reproducible-bui...@lists.alioth.debian.org Usertags: buildpath X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org Hi, Whilst working on the Reproducible Builds effort [0], we noticed that clfft could not be built reproducibly. Patch attached that fixes the documentation (at least), but this does not resolve all the issues in the package — an "unrelated" binary is also not reproducible. [0] https://reproducible-builds.org/ Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- diff --git a/docs/clFFT.doxy b/docs/clFFT.doxy index 131a454..c2241f2 100644 --- a/docs/clFFT.doxy +++ b/docs/clFFT.doxy @@ -140,7 +140,7 @@ INLINE_INHERITED_MEMB = NO # shortest path that makes the file name unique will be used # The default value is: YES. -FULL_PATH_NAMES= YES +FULL_PATH_NAMES= NO # The STRIP_FROM_PATH tag can be used to strip a user-defined part of the path. # Stripping is only done if one of the specified strings matches the left-hand -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#891073: clblas: please make the build reproducible
Source: clblas Version: 2.12-1 Severity: wishlist Tags: patch User: reproducible-bui...@lists.alioth.debian.org Usertags: buildpath X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org Hi, Whilst working on the Reproducible Builds effort [0], we noticed that clblas could not be built reproducibly. Patch attached. You probably want to merge it with the existing patch against the Doxygen config file. :) [0] https://reproducible-builds.org/ Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- --- a/debian/patches/reproducible-build-2.patch 1970-01-01 01:00:00.0 +0100 --- b/debian/patches/reproducible-build-2.patch 2018-02-22 08:11:35.109200418 + @@ -0,0 +1,15 @@ +Description: Make the build reproducible +Author: Chris Lamb <la...@debian.org> +Last-Update: 2018-02-22 + +--- clblas-2.12.orig/doc/clBLAS.doxy clblas-2.12/doc/clBLAS.doxy +@@ -119,7 +119,7 @@ INLINE_INHERITED_MEMB = NO + # path before files name in the file list and in the header files. If set + # to NO the shortest path that makes the file name unique will be used. + +-FULL_PATH_NAMES= YES ++FULL_PATH_NAMES= NO + + # If the FULL_PATH_NAMES tag is set to YES then the STRIP_FROM_PATH tag + # can be used to strip a user-defined part of the path. Stripping is --- a/debian/patches/series 2018-02-22 08:03:54.400483178 + --- b/debian/patches/series 2018-02-22 08:11:34.165191547 + @@ -5,3 +5,4 @@ reproducible-build.patch use-boost-dynamic-libs.patch Detect-CBLAS-when-building-the-client.patch +reproducible-build-2.patch -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#890577: tkgate: please make the build reproducible
Source: tkgate
Version: 2.0~b10-5
Severity: wishlist
Tags: patch
User: reproducible-bui...@lists.alioth.debian.org
Usertags: buildpath
X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org
Hi,
Whilst working on the Reproducible Builds effort [0], we noticed
that tkgate could not be built reproducibly.
This is because it includes the output of `pwd` in the resulting
binary (which is useless/broken for an end-user, as well as being
a privacy leak of the builder).
Patch attached that sets TKGATE_SECONDARYHOME from TKGATE_HOMEDIR.
This is cleaner than removing the TKGATE_SECONDARYHOME mechanism
as the patch for _that_ would be:
--- a/src/tkgate/tkgate.c 2018-02-16 07:56:06.421183383 +
--- b/src/tkgate/tkgate.c 2018-02-16 08:27:09.286827217 +
@@ -122,32 +122,29 @@
* 1) Directory specified by TKGATE_HOME environment variable
* 2) Current directory
* 3) Directory specified by TKGATE_HOMEDIR in config.h
- * 4) Directory specified by TKGATE_SECONDARYHOME in config.h
*
* The #define value TKGATE_HOMEDIR is normally generated automatically by
the
* configure script using TKGATE_HOMEDIRBASE as a prefix and tkgate-x.y
(where
- * x.y is the version number) the subdirectory. The #define value
TKGATE_SECONDARYHOME
- * is normally set to the directory in which tkgate was configured/compiled.
+ * x.y is the version number) the subdirectory.
*
*/
void findTkGateHome(char *homeDir)
{
char buf[STRMAX];
- char *trydirs[4];
+ char *trydirs[3];
int i;
trydirs[0] = getenv("TKGATE_HOME");
trydirs[1] = getcwd(buf,STRMAX);
trydirs[2] = TKGATE_HOMEDIR;
- trydirs[3] = TKGATE_SECONDARYHOME;
- for (i = 0;i < 4;i++) {
+ for (i = 0;i < 3;i++) {
if (!trydirs[i]) continue;
strcpy(homeDir,trydirs[i]);
if (testHome(homeDir)) break;
}
- if (i == 4) {
+ if (i == 3) {
printf("\n");
printf("I could not locate the tkgate home directory. I tried looking
in:\n");
if (trydirs[0]) printf(" %s (environment variable)\n", trydirs[0]);
.. which is a little bizarre, not helped by the "magic numbers" used by
upstream :)
[0] https://reproducible-builds.org/
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
--- a/debian/patches/reproduible-build.patch1970-01-01 01:00:00.0
+0100
--- b/debian/patches/reproduible-build.patch2018-02-16 08:20:36.644564932
+
@@ -0,0 +1,15 @@
+Description: Make the build reproducible
+Author: Chris Lamb <la...@debian.org>
+Last-Update: 2018-02-16
+
+--- tkgate-2.0~b10.orig/configure.ac
tkgate-2.0~b10/configure.ac
+@@ -105,7 +105,7 @@ AH_BOTTOM([
+ # TkGate Installation Directories
+ #
+ currentDirectory=`pwd`
+-AC_DEFINE_UNQUOTED(TKGATE_SECONDARYHOME, "$currentDirectory", [Backup
location for TkGate home directory])
++AC_DEFINE_UNQUOTED(TKGATE_SECONDARYHOME, TKGATE_HOMEDIR, [Backup location for
TkGate home directory])
+
+ #
+ # Standard compiler checks
--- a/debian/patches/series 2018-02-16 07:56:06.417183359 +
--- b/debian/patches/series 2018-02-16 08:20:35.632559104 +
@@ -3,3 +3,4 @@
hardening.patch
remove-shebang-line.patch
typos.patch
+reproduible-build.patch
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Comments regarding neuron_7.5-1_amd64.changes
Just missing Kenneth Kundert I think. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#888540: mclibs: Missing patches due to incomplete quilt conversion?
Package: mclibs
Version: 20061220+dfsg3-3.1
Severity: important
Hi,
You are using source format "3.0 (quilt)" but have a bunch of
dpatch patches in debian/patches along with a 00list instead
of a "series" file.
Are the patches being applied? :)
Regards,
--
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: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
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Bug#888538: cernlib: Missing patches due to incomplete quilt conversion?
Package: cernlib
Version: 20061220+dfsg3-4.3
Severity: important
Hi,
You are using source format "3.0 (quilt)" but have a bunch of
dpatch patches in debian/patches along with a 00list instead
of a "series" file.
Are the patches being applied? :)
Regards,
--
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: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
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Bug#888541: paw: Missing patches due to incomplete quilt conversion?
Package: paw
Version: 1:2.14.04.dfsg.2-9.1+b1
Severity: important
Hi,
You are using source format "3.0 (quilt)" but have a bunch of
dpatch patches in debian/patches along with a 00list instead
of a "series" file.
Are the patches being applied? :)
Regards,
--
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: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
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Bug#888539: geant321: Missing patches due to incomplete quilt conversion?
Package: geant321
Version: 1:3.21.14.dfsg-11
Severity: important
You are using source format "3.0 (quilt)" but have a bunch of
dpatch patches in debian/patches along with a 00list instead
of a "series" file.
Are the patches being applied? :)
Regards,
--
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`. `'` la...@debian.org / chris-lamb.co.uk
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r-cran-plotly_4.7.1+dfsg-1_amd64.changes REJECTED
Hi, Looks like debian/JS/plotly/plotly.js has more embedded/concatenated files (without reference/attribution) eg. for Brandon Jones etc. -- Chris Lamb <la...@debian.org> Sun, 21 Jan 2018 05:32:31 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: r-cran-ggvis_0.4.3+dfsg-1_amd64.changes REJECTED
Hi Andreas Tille,
> > MIssing/unattributed code copy of (at least) Vega..?
>
> The copyright has:
>
> Files: inst/www/lib/vega/*
> Copyright: 2015-2017, University of Washington Interactive Data Lab
Maybe the copyright line didn't match up with the file properly. I
don't have easy access to the source to check, sorry.
If I'm wrong please re-upload.
Regards,
--
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r-cran-ggvis_0.4.3+dfsg-1_amd64.changes REJECTED
MIssing/unattributed code copy of (at least) Vega..? -- Chris Lamb <la...@debian.org> Mon, 15 Jan 2018 21:57:42 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
r-cran-utf8_1.1.3-1_amd64.changes REJECTED
Whilst you reference Unicode in the copyright file this masks that its a different license and/or a code copy. At the very least the disctinction could be clarified better. Thanks! (might be other issues, I stopped looking there...) -- Chris Lamb <la...@debian.org> Sun, 14 Jan 2018 02:35:30 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding r-cran-git2r_0.21.0-1_amd64.changes
derrived -> derived ;) -- Chris Lamb <la...@debian.org> Sat, 13 Jan 2018 03:17:45 + -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
r-cran-git2r_0.21.0-1_amd64.changes REJECTED
Contains embedded/unattributed/unmentioned code copy of libgit. -- Chris Lamb <la...@debian.org> Wed, 10 Jan 2018 16:22:53 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#886703: normaliz: please make the build reproducible
Source: normaliz
Version: 3.5.1+ds-2
Severity: wishlist
Tags: patch
User: reproducible-bui...@lists.alioth.debian.org
Usertags: timestamps
X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org
Hi,
Whilst working on the Reproducible Builds effort [0], we noticed
that normaliz could not be built reproducibly.
Patch attached.
[0] https://reproducible-builds.org/
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
--- a/debian/patches/reproducible-build.patch 1970-01-01 05:30:00.0
+0530
--- b/debian/patches/reproducible-build.patch 2018-01-09 08:45:39.684620084
+0530
@@ -0,0 +1,15 @@
+Description: Make the build reproducible
+Author: Chris Lamb <la...@debian.org>
+Last-Update: 2018-01-09
+
+--- normaliz-3.5.1+ds.orig/doc/Normaliz.tex
normaliz-3.5.1+ds/doc/Normaliz.tex
+@@ -132,7 +132,7 @@
+
+ \centerline{\Large\textbf{Normaliz \version}} \vspace*{0.5cm}
+
+-\centerline{\today}
++\centerline{}
+
+ \vspace*{1cm}
+
--- a/debian/patches/series 2018-01-09 08:32:32.355619975 +0530
--- b/debian/patches/series 2018-01-09 08:45:38.304606601 +0530
@@ -1 +1,2 @@
debianization.patch
+reproducible-build.patch
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Bug#885873: cypari2: please make the build reproducible
tags 885873 + fixed-upstream thanks Merged upstream :) Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#885873: cypari2: please make the build reproducible
forwarded 885873 https://github.com/defeo/cypari2/pull/48 thanks I've forwarded this upstream here: https://github.com/defeo/cypari2/pull/48 Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#885873: cypari2: please make the build reproducible
Source: cypari2
Version: 1.0.0-3
Severity: wishlist
Tags: patch
User: reproducible-bui...@lists.alioth.debian.org
Usertags: buildpath
X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org
Hi,
Whilst working on the Reproducible Builds effort [0], we noticed
that cypari2 could not be built reproducibly as it embeds the
absolute build path in the generated .pxd files.
Patch attached.
[0] https://reproducible-builds.org/
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
--- a/debian/patches/reproducible_build.patch 1970-01-01 01:00:00.0
+0100
--- b/debian/patches/reproducible_build.patch 2017-12-30 18:09:41.607997970
+
@@ -0,0 +1,24 @@
+Description: Make the build reproducible
+Author: Chris Lamb <la...@debian.org>
+Last-Update: 2017-12-30
+
+--- cypari2-1.0.0.orig/autogen/generator.py
cypari2-1.0.0/autogen/generator.py
+@@ -34,7 +34,7 @@ cdef class Gen_auto:
+ This class is not meant to be used directly, use the derived class
+ :class:`Gen` instead.
+ """
+-'''.format(__file__)
++'''.format(os.path.relpath(__file__, os.getcwd()))
+
+ instance_banner = '''# This file is auto-generated by {}
+
+@@ -45,7 +45,7 @@ cdef class Pari_auto:
+ You must never use this class directly (in fact, Sage may crash if
+ you do), use the derived class :class:`Pari` instead.
+ """
+-'''.format(__file__)
++'''.format(os.path.relpath(__file__, os.getcwd()))
+
+
+ function_re = re.compile(r"^[A-Za-z][A-Za-z0-9_]*$")
--- a/debian/patches/series 1970-01-01 01:00:00.0 +0100
--- b/debian/patches/series 2017-12-30 18:06:02.966591684 +
@@ -0,0 +1 @@
+reproducible_build.patch
--
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Bug#885853: sasview: please make the build reproducible
Source: sasview Version: 4.2.0~git20171031-2 Severity: wishlist Tags: patch User: reproducible-bui...@lists.alioth.debian.org Usertags: buildpath X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org Hi, Whilst working on the Reproducible Builds effort [0], we noticed that sasview could not be built reproducibly. This is because of absolute build paths in the documentation. Patch attached. [0] https://reproducible-builds.org/ Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- diff --git a/debian/rules b/debian/rules index 694b22c..4b07bdd 100755 --- a/debian/rules +++ b/debian/rules @@ -34,6 +34,9 @@ override_dh_auto_build: # reassemble the docs from dependent packages to make the overall ./debian/fetchdocs python ./docs/sphinx-docs/build_sphinx.py + # Strip absolute build paths from HTML documentation + find -type f -name '*.html' -print0 | \ + xargs -0r sed -i -e "s@$(CURDIR)/`echo build/lib.*`@path/to@g" ln -sf /usr/share/javascript/mathjax/ docs/sphinx-docs/build/html/_static/mathjax touch test/__init__.py -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#885734: opencv: Source includes "samples/data/lena_tmpl.jpg" listed in Files-Excluded header
Source: opencv Version: 3.2.0+dfsg-4 Severity: important User: la...@debian.org Usertags: files-excluded Dear Maintainer, opencv lists "samples/data/lena.jpg" in the Files-Excluded field in debian/copyright but the source tree contains samples/data/lena_tmpl.jpg. This might be a DFSG violation, the referenced files are probably not attributed in debian/copyright or the upstream tarball was simply not repacked as intended. Alternatively, the field is simply out of date. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#885700: testu01: Source includes "mylib/num.h" listed in Files-Excluded header
Source: testu01 Version: 1.2.3+ds-2 Severity: normal User: la...@debian.org Usertags: files-excluded Dear Maintainer, testu01 lists "mylib/num.h" in the Files-Excluded field in debian/copyright but the source tree contains this file. This might be a DFSG violation, the referenced files are probably not attributed in debian/copyright or the upstream tarball was simply not repacked as intended. Alternatively, the field is simply out of date. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#884256: pysph: please make the build reproducible
Source: pysph Version: 0~20160514.git91867dc-4 Severity: wishlist Tags: patch User: reproducible-bui...@lists.alioth.debian.org Usertags: kernel X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org Hi, Whilst working on the Reproducible Builds effort [0], we noticed that pysph could not be built reproducibly. This is because it generates a Python .egg in a directory that is named with the current kernel version. On the Debian i386 architecture this can either be i686 or x86_64 when running the 64-bit kernel. Patch attached that uses --single-version-externally-managed instead, preventing the generation of the egg in the first place. [0] https://reproducible-builds.org/ Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- --- a/debian/rules 2017-12-12 21:27:30.217492858 + --- b/debian/rules 2017-12-12 22:39:47.621834301 + @@ -13,8 +13,7 @@ override_dh_auto_install: dh_numpy - mkdir -p $(CURDIR)/debian/tmp/usr/lib/python2.7/site-packages/ - python setup.py install --prefix=$(CURDIR)/debian/tmp/usr + python setup.py install --root=$(CURDIR)/debian/tmp --single-version-externally-managed --install-layout=deb --no-compile rm -rf $(CURDIR)/debian/tmp/usr/lib/python2.7/site-packages/setuptools.pth rm -rf $(CURDIR)/debian/tmp/usr/lib/python2.7/site-packages/sit* -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#884090: superlu: Source includes "SRC/mc64ad.c" listed in Files-Excluded header
Hi Drew! > Looks like you're looking at the SRC dir after debian patches have been > applied. Indeed; thanks for pointing that out and for closing the bugs. :) (FYI as Lintian will report a warning on this in recent versions, you may need to specify an override with a suitable explanatory comment.) Thanks again. Best wishes, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#883842: superlu: Source includes "SRC/mc64ad.c" listed in Files-Excluded header
Hi Drew! > Looks like you're looking at the SRC dir after debian patches have been > applied. Indeed; thanks for pointing that out and for closing the bugs. :) (FYI as Lintian will report a warning on this in recent versions, you may need to specify an override with a suitable explanatory comment.) Thanks again. Best wishes, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#884090: superlu-dist: Source includes "SRC/mc64ad_dist.c" listed in Files-Excluded header
Source: superlu-dist Version: 5.2.2+dfsg1-3 Severity: serious User: la...@debian.org Usertags: files-excluded Dear Maintainer, superlu-dist lists "SRC/mc64ad_dist.*" in the Files-Excluded field in debian/copyright but the source tree contains SRC/mc64ad_dist.c. This might be a DFSG violation, the referenced files are probably not attributed in debian/copyright or the upstream tarball was simply not repacked as intended. Alternatively, the field is simply out of date. (See also: #883842) Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#884083: ignition-math2: Source includes "test/gtest/include/gtest/gtest.h" etc. listed in Files-Excluded header
Source: ignition-math2 Version: 2.8.0-4 Severity: important User: la...@debian.org Usertags: files-excluded Dear Maintainer, ignition-math2 lists "test/gtest" in the Files-Excluded field in debian/copyright but the source tree contains test/gtest/include/gtest/gtest.h etc. This might be a DFSG violation, or at least the upstream tarball was not repacked as intended. Alternatively, the field is simply out of date. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#883842: superlu: Source includes "SRC/mc64ad.c" listed in Files-Excluded header
Hi Sébastien, > However, a new (free) SRC/mc64ad.c is regenerated through a patch > (debian/patches/mc64ad-stub.patch) in order to make the package compile > despite > the removal of the non-free files. Ah, interesting. :) So, I would add an override for the "source-includes-file-in-files-excluded" Lintian tag and include an explanation there. That should cover it I think. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#883842: superlu: Source includes "SRC/mc64ad.c" listed in Files-Excluded header
Source: superlu Version: 5.2.1+dfsg1-3 Severity: serious User: la...@debian.org Usertags: files-excluded Dear Maintainer, superlu lists "SRC/mc64ad.*" in the Files-Excluded field in debian/copyright but the source tree contains SRC/mc64ad.c. This is probably a DFSG violation, or at the upstream tarball was not repacked as intended. Alternatively, the field is simply out of date. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#883757: ignition-transport: Includes "test/gtest/cmake/internal_utils.cmake" listed in Files-Excluded header
Source: ignition-transport Version: 1.3.0-5 Severity: serious User: la...@debian.org Usertags: files-excluded Dear Maintainer, ignition-transport lists "test/gtest" in the Files-Excluded field in debian/copyright but the source tree contains test/gtest/cmake/internal_utils.cmake. This is probably a DFSG violation, or at the upstream tarball was not repacked as intended. Alternatively, the field is simply out of date. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#882639: sfepy: please make the documentation reproducible
Source: sfepy Version: 2016.2-4 Severity: wishlist Tags: patch User: reproducible-bui...@lists.alioth.debian.org Usertags: timestamps X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org Hi, Whilst working on the Reproducible Builds effort [0], we noticed that sfepy's documentation could not be built reproducibly. (The package will still be unreproducible due to a change in the terms.x86_64-linux-gnu.so file generated from terms.pyx, unfortunately.) Patch attached. [0] https://reproducible-builds.org/ Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: r-cran-rgenoud_5.7-12.4-1_amd64.changes REJECTED
Hi Andreas Tille, > Should I upload again since I actually don't know what to write in > d/copyright that would make any sense? Why not: R is simply issuing a copyright statement and this is a plain R output to compare with a test run. ;) Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
r-cran-sfsmisc_1.1-1-1_amd64.changes REJECTED
Hi, 7 Copyright: 2015-2017 Martin Maechler et al. .. is, I'm afraid, not up to the quality we expect in Debian.. :) -- Chris Lamb <la...@debian.org> Sat, 04 Nov 2017 23:17:25 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
r-cran-rgenoud_5.7-12.4-1_amd64.changes REJECTED
Hi Missing attribution for tests/tests.Rout.save? -- Chris Lamb <la...@debian.org> Sat, 04 Nov 2017 23:16:19 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding r-cran-lmertest_2.0-33-1_amd64.changes
Hi, Please add "The R Foundation for Statistical Computing" (and possibly others) to debian/copyright on your next upload. -- Chris Lamb <la...@debian.org> Tue, 29 Aug 2017 19:13:23 + -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
cypari2_1.0.0-1_amd64.changes REJECTED
Hi maintainer, Sorry but I'm going to have to reject your package due to missing attributions for at least Jeroen Demeyer, Luca De Feo, Vincent Delecroix, William Stein etc. Please check over your entire package as I stopped looking there. -- Chris Lamb <la...@debian.org> Wed, 16 Aug 2017 14:43:45 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#868652: ros-vcstools FTBFS: CalledProcessError: Command 'git commit -m initial' returned non-zero exit status 128
reopen 868652 found 0.1.39-4 thanks (Just following up from IRC) This appears to be still affecting 0.1.39-4. Regards, -- ,''`. : :' : Chris Lamb, Debian Project Leader `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: sundials_2.7.0+dfsg-1~exp1_amd64.changes REJECTED
Dima Kogan wrote: > Thanks for finding these. Did you do this manually, or do you have some > tool to check debian/copyright for completeness? Beyond a grep for "copyright", no tool :) Regards, -- ,''`. : :' : Chris Lamb, Debian Project Leader `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#834653: nlopt: typo in debian/rules (override_dh_auto_reconf -> override_dh_autoreconf)
Hi Sergey,
> Chris, could you review and upload package (I don't have
> permissions for this package, as before).
>
> Package was uploaded to m.d.n:
> https://mentors.debian.net/package/nlopt
Uploaded :) Do upgrade your lintian for your next package preparation
(eg. for at least Standards-Version: 4.0.0)
Best wishes,
--
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sundials_2.7.0+dfsg-1~exp1_amd64.changes REJECTED
Looks like a bunch of missing attributions under examples/templates/* and config/. -- Chris Lamb <la...@debian.org> Sat, 01 Jul 2017 14:25:04 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#863117: scilab: please make the build reproducible
Source: scilab Version: 5.5.2-4 Severity: wishlist Tags: patch User: reproducible-bui...@lists.alioth.debian.org Usertags: timestamps X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org Hi, Whilst working on the Reproducible Builds effort [0], we noticed that scilab could not be built reproducibly as it embeds the current year into the generated binaries. Patch attached. [0] https://reproducible-builds.org/ Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- diff --git a/configure.ac b/configure.ac index 433059f..813e488 100644 --- a/configure.ac +++ b/configure.ac @@ -1882,6 +1882,9 @@ if test ! -f modules/core/src/c/banier.c; then fi CURRENT_YEAR=`date "+%Y"` +if test -n "$SOURCE_DATE_EPOCH"; then + CURRENT_YEAR=`date --utc --date="@$SOURCE_DATE_EPOCH" "+%Y"` +fi DETECTED_YEAR=`grep "Copyright (c) 2011-" modules/core/src/c/banier.c|sed -e "s/.*Copyright (c) 2011-\([[0-9]]*\).*/\1/g"` if test "$CURRENT_YEAR" != "$DETECTED_YEAR"; then -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#861767: libgetdata: Incomplete debian/copyright?
Source: libgetdata Version: 0.10.0-1 Severity: serious Justication: Policy 12.5 X-Debbugs-CC: Alastair McKinstry <mckins...@debian.org> Hi, I just ACCEPTed libgetdata from NEW but noticed it was missing attribution in debian/copyright for at least m4/ax_compare_version.m4. (This is not exhaustive so please check over the entire package carefully and address these on your next upload.) Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#860278: openigtlink: please make the build reproducible
Source: openigtlink
Version: 1.11.0-1
Severity: wishlist
Tags: patch
User: reproducible-bui...@lists.alioth.debian.org
Usertags: buildpath
X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org
Hi,
Whilst working on the Reproducible Builds effort [0], we noticed
that openigtlink could not be built reproducibly.
This is due to it including the build path in the resulting binary.
As the OpenIGTLink_SOURCE_DIR variable is kinda useless anyway
(see the surrounding comment), we can just patch it out AFAICT.
Patch attached.
[0] https://reproducible-builds.org/
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
--- a/debian/patches/reproducible_build.patch 1970-01-01 01:00:00.0
+0100
--- b/debian/patches/reproducible_build.patch 2017-04-13 22:40:48.186741142
+0100
@@ -0,0 +1,15 @@
+Description: Make the build reproducible
+Author: Chris Lamb <la...@debian.org>
+Last-Update: 2017-04-13
+
+--- openigtlink-1.11.0.orig/GenerateOpenIGTLinkConfig.cmake
openigtlink-1.11.0/GenerateOpenIGTLinkConfig.cmake
+@@ -14,7 +14,7 @@ SET(OpenIGTLink_CONFIG_CODE "
+ # it is highly probable that it will cause more harm than being useful.
+ # Use OpenIGTLink_INCLUDE_DIRS instead, since OpenIGTLink_SOURCE_DIR may
point to non-existent directory
+ IF(NOT OpenIGTLink_LEGACY_REMOVE)
+- SET(OpenIGTLink_SOURCE_DIR \"${OpenIGTLink_SOURCE_DIR}\")
++ SET(OpenIGTLink_SOURCE_DIR \"/nonexistent\")
+ ENDIF(NOT OpenIGTLink_LEGACY_REMOVE)"
+ )
+
--- a/debian/patches/series 2017-04-13 22:35:22.277260413 +0100
--- b/debian/patches/series 2017-04-13 22:40:45.938730380 +0100
@@ -1 +1,2 @@
install_path.patch
+reproducible_build.patch
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Bug#859492: mumps: Incomplete debian/copyright?
Source: mumps Version: 5.1.1-1exp1 Severity: serious Justication: Policy 12.5 X-Debbugs-CC: Drew Parsons <dpars...@debian.org> Hi, I just ACCEPTed mumps from NEW but noticed it was missing attribution in debian/copyright for at least src/ana_orderings.F. (This is not exhaustive so please check over the entire package carefully and address these on your next upload.) Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#859080: spyder-memory-profiler: FTBFS: AttributeError: 'NoneType' object has no attribute 'toUtf8'
Ghislain Vaillant wrote: > Do you believe the RC severity remains justified though? Not sure; I'll leave that to your judgement :) Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#859080: spyder-memory-profiler: FTBFS: AttributeError: 'NoneType' object has no attribute 'toUtf8'
Ghislain Vaillant wrote:
> I am going to need some more context here. The build ran fine on the
> builders when the package was initially uploaded, and still runs fine on
> both my unstable chroot and debomatic [1].
/usr/lib/python3/dist-packages/spyder/utils/programs.py:33: in
username = encoding.to_unicode_from_fs(os.environ.get('USER'))
^ Looks like it assumes that a USER environment variable exists. Is this
a fair assumption to make?
Regards,
--
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Bug#859080: spyder-memory-profiler: FTBFS: AttributeError: 'NoneType' object has no attribute 'toUtf8'
Source: spyder-memory-profiler
Version: 0.1.0-1
Severity: serious
Justification: fails to build from source
User: reproducible-bui...@lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org
Dear Maintainer,
spyder-memory-profiler fails to build from source in unstable/amd64:
[…]
= test session starts
==
platform linux -- Python 3.5.3, pytest-3.0.6, py-1.4.32, pluggy-0.4.0
PyQt5 5.7 -- Qt runtime 5.7.1 -- Qt compiled 5.7.1
rootdir: «BUILDDIR», inifile:
plugins: xvfb-1.0.0, qt-2.1.0
collected 0 items / 1 errors
ERRORS
ERROR collecting
.pybuild/pythonX.Y_3.5/build/spyder_memory_profiler/widgets/tests/test_memoryprofiler.py
/usr/lib/python3/dist-packages/py/_path/local.py:662: in pyimport
__import__(modname)
spyder_memory_profiler/__init__.py:12: in
from .memoryprofiler import MemoryProfiler
spyder_memory_profiler/memoryprofiler.py:14: in
from spyder.utils.qthelpers import qapplication
/usr/lib/python3/dist-packages/spyder/utils/qthelpers.py:26: in
from spyder.config.gui import get_shortcut
/usr/lib/python3/dist-packages/spyder/config/gui.py:26: in
from spyder.config.main import CONF
/usr/lib/python3/dist-packages/spyder/config/main.py:22: in
from spyder.config.user import UserConfig
/usr/lib/python3/dist-packages/spyder/config/user.py:26: in
from spyder.utils.programs import check_version
/usr/lib/python3/dist-packages/spyder/utils/programs.py:33: in
username = encoding.to_unicode_from_fs(os.environ.get('USER'))
/usr/lib/python3/dist-packages/spyder/utils/encoding.py:65: in
to_unicode_from_fs
string = to_text_string(string.toUtf8(), 'utf-8')
E AttributeError: 'NoneType' object has no attribute 'toUtf8'
!!! Interrupted: 1 errors during collection
=== 1 error in 0.32 seconds
E: pybuild pybuild:283: test: plugin distutils failed with: exit code=2: cd
«BUILDDIR»/.pybuild/pythonX.Y_3.5/build; python3.5 -m pytest
dh_auto_test: pybuild --test --test-pytest -i python{version} -p 3.5 returned
exit code 13
debian/rules:12: recipe for target 'build' failed
make: *** [build] Error 25
dpkg-buildpackage: error: debian/rules build gave error exit status 2
[…]
The full build log is attached.
Regards,
--
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: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
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spyder-memory-profiler.0.1.0-1.unstable.amd64.log.txt.gz
Description: Binary data
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ffc_2016.2.0-2_amd64.changes REJECTED
REJECTing due to inactivity/no response -- please re-upload and/or followup to previous mails :) -- Chris Lamb <la...@debian.org> Wed, 29 Mar 2017 17:33:05 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
openmeca_2.1.7-1_amd64.changes REJECTED
Dear Maintainer, Missing a lot of references so this cannot pass NEW (eg. SRC/Qwt/src/qwt_text_label.cpp but I stopped looking around there). Please check your package in its entirity and update d/copyright. :) -- Chris Lamb <la...@debian.org> Wed, 29 Mar 2017 17:32:26 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#859032: hfst-ospell: Incomplete debian/copyright?
Source: hfst-ospell Version: 0.4.3~r338-1 Severity: serious Justication: Policy 12.5 X-Debbugs-CC: Kartik Mistry <kar...@debian.org> Hi, I just ACCEPTed hfst-ospell from NEW but noticed it was missing attribution in debian/copyright for at least: office.cc:4: Copyright 2015 Tino Didriksen <m...@tinodidriksen.com> (This is not exhaustive so please check over the entire package carefully and address these on your next upload.) Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
cvxopt_1.1.8+dfsg-1_amd64.changes REJECTED
Hi, Sorry but I'm going to have to reject your package. Please update debian/copyright explaining the copyright (etc.) stuff that is mentioned in (for example) doc/source/copyright.rst: 34 * **AMD** Version 2.4.1. Copyright (c) 2009-2014 by Timothy A. Davis,_ 35 Patrick R. Amestoy, and Iain S. Duff.__ 36 37 * **CHOLMOD** Version 3.0.6. Copyright (c) 2005-2015 by the 38 University of Florida, Timothy A. Davis, and W. Hager. 39 40 * **COLAMD** Version 2.9.1. Copyright (c) 1998-2014 by Timothy A. Davis. 41 42 * **UMFPACK** Version 5.7.1. Copyright (c) 1995-2014 by Timothy A. Davis. Even if these are "harmless", I feel like it needs clarification in debian/copyright for our users an downstream distributions (rather than in a private conversation here). -- la...@debian.org === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#857088: graywolf: Incomplete debian/copyright?
Source: graywolf Version: 0.1.4+20170307gite1bf319-1 Severity: serious Justication: Policy 12.5 X-Debbugs-CC: Ruben Undheim <ruben.undh...@gmail.com> Hi, I just ACCEPTed graywolf from NEW but noticed it was missing attribution in debian/copyright for at least Staf Verhaegen. (This is not exhaustive so please check over the entire package carefully and address these on your next upload.) Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: r-cran-mcmcpack_1.3-8-1_amd64.changes REJECTED
Andreas Tille wrote:
> BTW, if I might give some hints about priorities inside new queue from
> the Debian Med perspective besides r-cran-mcmcpack:
>
>1. libbio-coordinate-perl (helps fixing 2 RC bugs)
>2. r-cran-prettyunits (helps upgrading r-cran-rncl)
>3. r-cran-progress (helps upgrading r-cran-rncl)
>4. camp (helps re-introducing fw4spl and rewards work of newcomer)
Processed. :)
Regards,
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r-cran-mcmcpack_1.3-8-1_amd64.changes REJECTED
Please recheck d/copyright; missing attributions for at least src/lecuyer.h and src/mersenne.h (I stopped looking there) -- Chris Lamb <la...@debian.org> Sat, 17 Dec 2016 22:27:09 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
sagemath_7.4-1_amd64.changes REJECTED
I'm afraid we are missing too many attributions in debian/copyright here which makes me worry about the rest of the package. For example: sage/src/sage/tensor/modules/free_module_* sage/src/sage/symbolic/random_tests.py sage/src/sage/typeset/character_art.py sage/src/sage/symbolic/maxima_wrapper.py (many more not listed, and I stopped looking anyway). -- Chris Lamb <la...@debian.org> Sat, 17 Dec 2016 22:34:10 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#847172: sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128)
Ximin Luo wrote: > I can't reproduce this, even when setting the locale to various non-UTF > values Not sure why you were trying this specifically; I don't do anything special by default — or I would mention it! — and build under en_GB.UTF-8 etc. (See the top of the full build log). If it "helps", I can still reproduce this on the today's sid. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#847172: sagenb-export: FTBFS: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128)
Source: sagenb-export Version: 2.0-1 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org Dear Maintainer, sagenb-export fails to build from source in unstable/amd64: […] py27 runtests: PYTHONHASHSEED='256193135' py27 runtests: commands[0] | python2.7 -m unittest discover ...E.. == ERROR: test_aleksandra_slapik_44 (test.test_sagenb_writer.ReadSageNB) -- Traceback (most recent call last): File "«BUILDDIR»/test/test_sagenb_writer.py", line 39, in test_aleksandra_slapik_44 ipynb.write(self.tmp_filename(u'WDI projekt - R\xf3\u017cankowski, Kie\u0142pi\u0144ski, Kozok.ipynb')) File "«BUILDDIR»/sagenb_export/ipynb_writer.py", line 58, in write write(ipynb, filename) File "/usr/lib/python2.7/dist-packages/nbformat/__init__.py", line 163, in write with io.open(fp, 'w', encoding='utf-8') as f: UnicodeEncodeError: 'ascii' codec can't encode characters in position 41-42: ordinal not in range(128) -- Ran 6 tests in 0.028s FAILED (errors=1) ERROR: InvocationError: '«BUILDDIR»/.tox/py27/bin/python2.7 -m unittest discover' py35 create: «BUILDDIR»/.tox/py35 py35 inst: «BUILDDIR»/.tox/dist/sagenb_export-2.0.zip py35 installed: decorator==4.0.6,devscripts==2.16.11,entrypoints==0.2.2.post2,ipykernel==4.5.0,ipython==5.1.0,ipython-genutils==0.1.0,Jinja2==2.8,jsonschema==2.5.1,jupyter-client==4.4.0,jupyter-core==4.2.0,MarkupSafe==0.23,mistune==0.7.3,nbconvert==4.2.0,nbformat==4.1.0,notebook==4.2.3,pexpect==4.2.0,pickleshare==0.7.4,pkg-resources==0.0.0,pluggy==0.4.0,prompt-toolkit==1.0.9,ptyprocess==0.5.1,py==1.4.31,Pygments==2.1.3,pyzmq==15.4.0,sagenb-export==2.0,simplegeneric==0.8.1,six==1.10.0,terminado==0.6,tornado==4.4.2,tox==2.5.0,traitlets==4.3.1,virtualenv==15.1.0,wcwidth==0.1.7 py35 runtests: PYTHONHASHSEED='256193135' py35 runtests: commands[0] | python3.5 -m unittest discover E. == ERROR: test_aleksandra_slapik_44 (test.test_sagenb_writer.ReadSageNB) -- Traceback (most recent call last): File "«BUILDDIR»/test/test_sagenb_writer.py", line 39, in test_aleksandra_slapik_44 ipynb.write(self.tmp_filename(u'WDI projekt - R\xf3\u017cankowski, Kie\u0142pi\u0144ski, Kozok.ipynb')) File "«BUILDDIR»/sagenb_export/ipynb_writer.py", line 58, in write write(ipynb, filename) File "/usr/lib/python3/dist-packages/nbformat/__init__.py", line 163, in write with io.open(fp, 'w', encoding='utf-8') as f: UnicodeEncodeError: 'ascii' codec can't encode characters in position 43-44: ordinal not in range(128) -- Ran 6 tests in 0.020s FAILED (errors=1) ERROR: InvocationError: '«BUILDDIR»/.tox/py35/bin/python3.5 -m unittest discover' ___ summary ERROR: py27: commands failed ERROR: py35: commands failed debian/rules:23: recipe for target 'override_dh_auto_test' failed make[1]: *** [override_dh_auto_test] Error 1 make[1]: Leaving directory '«BUILDDIR»' debian/rules:9: recipe for target 'build' failed make: *** [build] Error 2 dpkg-buildpackage: error: debian/rules build gave error exit status 2 […] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- sagenb-export.2.0-1.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#844199: ros-message-generation: FTBFS: INSTALL cannot find "/home/lamby/temp/cdt.20161113092941.NnUukgDcPF.db.ros-message-generation/ros-message-generation-0.4.0/obj-x86_64-linux-gnu/gtest/libgtes
le INSTALL cannot find
"/home/lamby/temp/cdt.20161113092941.NnUukgDcPF.db.ros-message-generation/ros-message-generation-0.4.0/obj-x86_64-linux-gnu/gtest/libgtest.so".
Call Stack (most recent call first):
cmake_install.cmake:134 (include)
Makefile:64: recipe for target 'install' failed
make[2]: *** [install] Error 1
make[2]: Leaving directory
'/home/lamby/temp/cdt.20161113092941.NnUukgDcPF.db.ros-message-generation/ros-message-generation-0.4.0/obj-x86_64-linux-gnu'
dh_auto_install: make -j9 install
DESTDIR=/home/lamby/temp/cdt.20161113092941.NnUukgDcPF.db.ros-message-generation/ros-message-generation-0.4.0/debian/tmp
AM_UPDATE_INFO_DIR=no returned exit code 2
debian/rules:8: recipe for target 'override_dh_auto_install-indep' failed
make[1]: *** [override_dh_auto_install-indep] Error 2
make[1]: Leaving directory
'/home/lamby/temp/cdt.20161113092941.NnUukgDcPF.db.ros-message-generation/ros-message-generation-0.4.0'
debian/rules:5: recipe for target 'binary' failed
make: *** [binary] Error 2
[…]
The full build log is attached.
Regards,
--
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Description: Binary data
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Bug#840098: fpga-icestorm: please make the build reproducible
Source: fpga-icestorm
Version: 0~20160913git266e758-1
Severity: wishlist
Tags: patch
User: reproducible-bui...@lists.alioth.debian.org
Usertags: randomness
X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org
Hi,
Whilst working on the Reproducible Builds effort [0], we noticed
that fpga-icestorm could not be built reproducibly.
Patch attached. There already exists a reproducible patch - will let
you merge them rather than send you a diff-of-a-diff-of-a-… :)
[0] https://reproducible-builds.org/
Regards,
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--- a/debian/patches/reproducible2.patch1970-01-01 01:00:00.0
+0100
--- b/debian/patches/reproducible2.patch2016-10-08 10:29:21.796839994
+0100
@@ -0,0 +1,15 @@
+Description: Make the build reproducible
+Author: Chris Lamb <la...@debian.org>
+Last-Update: 2016-10-08
+
+--- fpga-icestorm-0~20160913git266e758.orig/icebox/icebox_chipdb.py
fpga-icestorm-0~20160913git266e758/icebox/icebox_chipdb.py
+@@ -262,7 +262,7 @@ for pllid in ic.pll_list():
+ if pllid in icebox.noplls_db[entry]:
+ locked_pkgs.append(entry.split("-")[1])
+ if len(locked_pkgs) > 0:
+-print("LOCKED %s" % " ".join(locked_pkgs))
++print("LOCKED %s" % " ".join(sorted(locked_pkgs)))
+ for key in sorted(pllinfo):
+ if key != "LOC":
+ print("%s %s" % (key, " ".join([str(k) for k in pllinfo[key]])))
--- a/debian/patches/series 2016-10-08 10:21:09.334585609 +0100
--- b/debian/patches/series 2016-10-08 10:29:20.248820313 +0100
@@ -1,3 +1,4 @@
01_installpath.patch
03_cxxflags.patch
reproducible.patch
+reproducible2.patch
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Comments regarding glbinding_2.1.1-1_amd64.changes
Please clarify (at least): - source/tests/googletest/googlemock/scripts/* on your next upload... -- Chris Lamb <la...@debian.org> Mon, 05 Sep 2016 19:52:50 + -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding bcolz_1.1.0+ds1-1_amd64.changes
Please mention (at least) the NumPy attribution on you next upload. -- Chris Lamb <la...@debian.org> Sun, 04 Sep 2016 17:59:12 + -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding pytango_9.2.0-1~exp1_i386.changes
Why isn't "European Synchrotron Radiation Facility" mentioned in d/copyright? Please clarify in your next upload. -- Chris Lamb <la...@debian.org> Sat, 03 Sep 2016 21:30:57 + -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#836070: r-cran-sem: FTBFS: ERROR: dependencies 'MASS', 'boot' are not available for package 'sem'
libthai0:amd64 (0.1.25-1) ... Setting up libicu-dev (57.1-3) ... Setting up libjpeg-dev (1:1.5.0-1) ... Setting up libice6:amd64 (2:1.0.9-1+b1) ... Setting up libpng-dev:amd64 (1.6.24-2) ... Setting up libxcb1:amd64 (1.11.1-1.1) ... Setting up gfortran (4:6.1.1-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libfontconfig1:amd64 (2.11.0-6.7) ... Setting up libsm6:amd64 (2:1.2.2-1+b1) ... Setting up libxcb-render0:amd64 (1.11.1-1.1) ... Setting up libblas-dev (3.6.1-2) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libx11-6:amd64 (2:1.6.3-1) ... Setting up libxcb-shm0:amd64 (1.11.1-1.1) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libxrender1:amd64 (1:0.9.9-2) ... Setting up libxft2:amd64 (2.3.2-1) ... Setting up fontconfig (2.11.0-6.7) ... Regenerating fonts cache... done. Setting up liblapack-dev (3.6.1-2) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libxext6:amd64 (2:1.3.3-1) ... Setting up libxss1:amd64 (1:1.2.2-1) ... Setting up libpango-1.0-0:amd64 (1.40.1-1) ... Setting up libcairo2:amd64 (1.14.6-1+b1) ... Setting up libtk8.6:amd64 (8.6.6-1) ... Setting up libpangoft2-1.0-0:amd64 (1.40.1-1) ... Setting up libpangocairo-1.0-0:amd64 (1.40.1-1) ... Setting up r-base-core (3.3.1-1+b1) ... Creating config file /etc/R/Renviron with new version Setting up r-base-dev (3.3.1-1) ... Setting up r-cran-matrixcalc (1.0.3-2) ... Setting up r-cran-mi (1.0-4) ... Setting up r-cran-sem-build-deps (3.1.7-3) ... Processing triggers for libc-bin (2.23-5) ... Processing triggers for systemd (231-5) ... Processing triggers for ca-certificates (20160104) ... Updating certificates in /etc/ssl/certs... 173 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. ** ** Environment ** ** PATH=/home/lamby/git/projects/dotfiles/dotfiles/..//bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin HOSTNAME=784ee88ee7f8 TERM=xterm PAGER=more DISPLAY=:0 DOCKER_IMAGE=lamby-debian-sid DEB_BUILD_OPTIONS=parallel=9 PIP_DOWNLOAD_CACHE=/home/lamby/.cache/pip HOME=/home/lamby LOGNAME=lamby SHLVL=1 PWD=/home/lamby/temp/cdt.20160830123358.Uwe7SlUpUo.db.r-cran-sem/r-cran-sem-3.1.7 OLDPWD=/home/lamby/temp/cdt.20160830123358.Uwe7SlUpUo.db.r-cran-sem GPG_TTY=/dev/console QUILT_PATCHES=debian/patches QUILT_NO_DIFF_INDEX=1 QUILT_REFRESH_ARGS=-p ab --no-timestamps --no-index DEBEMAIL=la...@debian.org DEBFULLNAME=Chris Lamb EDITOR=vim LESS=-cgiFx4M GPG_KEY=1E953E27D4311E58 BLASTER=A220 I5 D1 H5 P330 T6 _=/usr/bin/env ** ** Building r-cran-sem 3.1.7-3 on amd64 ** ** dpkg-buildpackage -rfakeroot -D -us -uc -b dpkg-buildpackage: info: source package r-cran-sem dpkg-buildpackage: info: source version 3.1.7-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Joost van Baal-Ili <joos...@debian.org> dpkg-source --before-build r-cran-sem-3.1.7 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean test -x debian/rules dh_clean if test -d src; then \ find src -regex ".*\.o" | \ xargs --no-run-if-empty -r rm; \ fi rm -f config.log config.status debian/rules build test -x debian/rules mkdir -p "." fakeroot debian/rules binary test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "." dh_installdirsusr/lib/R/site-library echo "R:Depends=r-base-core (>= 3.3.1-1), r-api-3" >> debian/r-cran-sem.substvars if test -f /usr/bin/xvfb-run; then\ xvfb-run -a\ R CMD INSTALL -l /home/lamby/temp/cdt.20160830123358.Uwe7SlUpUo.db.r-cran-sem/r-cran-sem-3.1.7/debian/r-cran-sem/usr/lib/R/site-library --clean \ . \ "--built-timestamp=\"Mon, 29 Aug 2016 16:36:01 +0200\"" \
Bug#835284: urdfdom: FTBFS: Could not find a configuration file for package "urdfdom_headers" that is 367 compatible with requested version "0.4".
//ADVANCED property for variable: CMAKE_MODULE_LINKER_FLAGS_MINSIZEREL CMAKE_MODULE_LINKER_FLAGS_MINSIZEREL-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_MODULE_LINKER_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS_RELEASE-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_NM CMAKE_NM-ADVANCED:INTERNAL=1 //number of local generators CMAKE_NUMBER_OF_MAKEFILES:INTERNAL=1 //ADVANCED property for variable: CMAKE_OBJCOPY CMAKE_OBJCOPY-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_OBJDUMP CMAKE_OBJDUMP-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_RANLIB CMAKE_RANLIB-ADVANCED:INTERNAL=1 //Path to CMake installation. CMAKE_ROOT:INTERNAL=/usr/share/cmake-3.6 //ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS CMAKE_SHARED_LINKER_FLAGS-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS_DEBUG CMAKE_SHARED_LINKER_FLAGS_DEBUG-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS_MINSIZEREL CMAKE_SHARED_LINKER_FLAGS_MINSIZEREL-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS_RELEASE CMAKE_SHARED_LINKER_FLAGS_RELEASE-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS_RELWITHDEBINFO CMAKE_SHARED_LINKER_FLAGS_RELWITHDEBINFO-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_SKIP_INSTALL_RPATH CMAKE_SKIP_INSTALL_RPATH-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_SKIP_RPATH CMAKE_SKIP_RPATH-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS CMAKE_STATIC_LINKER_FLAGS-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS_DEBUG CMAKE_STATIC_LINKER_FLAGS_DEBUG-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS_RELEASE CMAKE_STATIC_LINKER_FLAGS_RELEASE-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO-ADVANCED:INTERNAL=1 //ADVANCED property for variable: CMAKE_STRIP CMAKE_STRIP-ADVANCED:INTERNAL=1 //uname command CMAKE_UNAME:INTERNAL=/bin/uname //ADVANCED property for variable: CMAKE_VERBOSE_MAKEFILE CMAKE_VERBOSE_MAKEFILE-ADVANCED:INTERNAL=1 //Details about finding TinyXML FIND_PACKAGE_MESSAGE_DETAILS_TinyXML:INTERNAL=[/usr/lib/x86_64-linux-gnu/libtinyxml.so][/usr/include][v()] //Test HAS_VISIBILITY HAS_VISIBILITY:INTERNAL=1 //ADVANCED property for variable: TinyXML_INCLUDE_DIR TinyXML_INCLUDE_DIR-ADVANCED:INTERNAL=1 //ADVANCED property for variable: TinyXML_LIBRARY TinyXML_LIBRARY-ADVANCED:INTERNAL=1 //CMAKE_INSTALL_PREFIX during last run _GNUInstallDirs_LAST_CMAKE_INSTALL_PREFIX:INTERNAL=/usr dh_auto_configure: cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var returned exit code 1 debian/rules:7: recipe for target 'build' failed make: *** [build] Error 2 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- urdfdom.0.4.1-1.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#834653: nlopt: typo in debian/rules (override_dh_auto_reconf -> override_dh_autoreconf)
Source: nlopt Version: 2.4.2+dfsg-2 Severity: minor Tags: patch Hi, I believe there is a typo in your debian/rules (override_dh_auto_reconf -> override_dh_autoreconf). I don't believe this affects the working of the package, but if anyone in the future added the "dh $@ --with=autoreconf" magic, then it would _not_ be able to see your override. Therefore, I suggest you normalise the name. Patch attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- diff --git a/debian/rules b/debian/rules index 615db51..c25c58e 100755 --- a/debian/rules +++ b/debian/rules @@ -12,7 +12,7 @@ bpath = $(shell octave-config -p LOCALOCTFILEDIR)/nlopt %: dh $@ --buildsystem=autoconf --builddirectory=$(BUILDDIR) --with python2 -override_dh_auto_reconf: +override_dh_autoreconf: [ -e bin/scripts ] || mkdir -p bin/scripts cp -f /usr/share/misc/config.guess /usr/share/misc/config.sub bin/scripts libtoolize --force --automake @@ -20,7 +20,7 @@ override_dh_auto_reconf: autoreconf -i automake -override_dh_auto_configure: override_dh_auto_reconf +override_dh_auto_configure: override_dh_autoreconf for v in $(PYVERS); do \ dh_auto_configure --builddirectory=$(BUILDDIR)$$v \ -- $(extra_flags) \ -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
libgap-sage_4.8.3+ds-1_amd64.changes REJECTED
Lots of files missing attribution, for example: src/intfuncs.c src/sctable.c src/sctable.h src/vec8bit.h src/weakptr.c I stopped looking here. -- Chris Lamb <la...@debian.org> Sun, 14 Aug 2016 13:11:21 + === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#833905: dimbl: FTBFS: include/dimbl/DimProcs.h:37:29: error: expected ')' before '&' token
) ...
Setting up cdbs (0.4.142) ...
Setting up libmpx0:amd64 (5.4.1-1) ...
Setting up libboost-regex1.61.0:amd64 (1.61.0+dfsg-2.1) ...
Setting up libasan2:amd64 (5.4.1-1) ...
Setting up pkg-config (0.29-4) ...
Setting up libtar0 (1.2.20-6) ...
Setting up libgcc-5-dev:amd64 (5.4.1-1) ...
Setting up icu-devtools (57.1-2) ...
Setting up libticcutils2v5 (0.13.1-1+b1) ...
Setting up libstdc++-5-dev:amd64 (5.4.1-1) ...
Setting up libticcutils2-dev (0.13.1-1+b1) ...
Setting up libtimbl4 (6.4.8-1) ...
Setting up libicu-dev (57.1-2) ...
Setting up libxml2-dev:amd64 (2.9.4+dfsg1-1+b1) ...
Setting up libtimbl4-dev (6.4.8-1) ...
Setting up dimbl-build-deps (0.12-2) ...
Processing triggers for libc-bin (2.23-4) ...
**
** Environment
**
**
PATH=/home/lamby/git/projects/dotfiles/dotfiles/..//bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
HOSTNAME=25fe2635c768
TERM=xterm
PAGER=more
DISPLAY=:0
DOCKER_IMAGE=lamby-debian-sid
DEB_BUILD_OPTIONS=parallel=9
PIP_DOWNLOAD_CACHE=/home/lamby/.cache/pip
HOME=/home/lamby
LOGNAME=lamby
SHLVL=1
PWD=/home/lamby/temp/cdt.20160810084053.cX2EXg73ka.dimbl/dimbl-0.12
OLDPWD=/home/lamby/temp/cdt.20160810084053.cX2EXg73ka.dimbl
GPG_TTY=/dev/console
QUILT_PATCHES=debian/patches
QUILT_NO_DIFF_INDEX=1
QUILT_REFRESH_ARGS=-p ab --no-timestamps --no-index
DEBEMAIL=la...@debian.org
DEBFULLNAME=Chris Lamb
EDITOR=vim
LESS=-cgiFx4M
GPG_KEY=1E953E27D4311E58
BLASTER=A220 I5 D1 H5 P330 T6
_=/usr/bin/env
**
** Building dimbl 0.12-2 on amd64
**
**
dpkg-buildpackage -rfakeroot -D -us -uc -b
dpkg-buildpackage: info: source package dimbl
dpkg-buildpackage: info: source version 0.12-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Joost van Baal-Ili
<joos...@debian.org>
dpkg-source --before-build dimbl-0.12
dpkg-buildpackage: info: host architecture amd64
fakeroot debian/rules clean
dh_listpackages: -s/--same-arch is deprecated; please use -a/--arch instead
test -x debian/rules
rm -f debian/stamp-makefile-build debian/stamp-makefile-install
/usr/bin/make -C . -k distclean
make[1]: Entering directory
'/home/lamby/temp/cdt.20160810084053.cX2EXg73ka.dimbl/dimbl-0.12'
make[1]: *** No rule to make target 'distclean'.
make[1]: Leaving directory
'/home/lamby/temp/cdt.20160810084053.cX2EXg73ka.dimbl/dimbl-0.12'
/usr/share/cdbs/1/class/makefile.mk:91: recipe for target 'makefile-clean'
failed
make: [makefile-clean] Error 2 (ignored)
rm -f debian/stamp-autotools
rmdir --ignore-fail-on-non-empty .
rmdir: failed to remove '.': Invalid argument
/usr/share/cdbs/1/class/autotools.mk:64: recipe for target 'makefile-clean'
failed
make: [makefile-clean] Error 1 (ignored)
set -e;
dh_clean
rm -f debian/stamp-autotools-files
debian/rules build
dh_listpackages: -s/--same-arch is deprecated; please use -a/--arch instead
test -x debian/rules
mkdir -p "."
set -e; mv ./config.guess ./config.guess.cdbs-orig; cp --remove-destination
/usr/share/misc/config.guess ./config.guess;
set -e; mv ./config.sub ./config.sub.cdbs-orig; cp --remove-destination
/usr/share/misc/config.sub ./config.sub;
touch debian/stamp-autotools-files
chmod a+x
/home/lamby/temp/cdt.20160810084053.cX2EXg73ka.dimbl/dimbl-0.12/./configure
mkdir -p .
cd . && CFLAGS="-g -O2
-fdebug-prefix-map=/home/lamby/temp/cdt.20160810084053.cX2EXg73ka.dimbl/dimbl-0.12=.
-fstack-protector-strong -Wformat -Werror=format-security" CXXFLAGS="-g -O2
-fdebug-prefix-map=/home/lamby/temp/cdt.20160810084053.cX2EXg73ka.dimbl/dimbl-0.12=.
-fstack-protector-strong -Wformat -Werror=format-security"
CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro"
/home/lamby/temp/cdt.20160810084053.cX2EXg73ka.dimbl/dimbl-0.12/./configure
--build=x86_64-linux-gnu --prefix=/usr --includedir="\${prefix}/include"
--mandir="\${prefix}/share/man" --infodir="\${prefix}/share/info"
--sysconfdir=/etc --localstatedir=/var --libexecdir="\${prefix}/lib/dimbl"
--srcdir=. --disable-maintainer-mode --disable-dependency-tracking
--disable-silent-rules
configure: WARNING: unrecognized options: --disable-maintainer-mode,
--disable-silent-rules
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p...
Bug#833714: ucto: FTBFS: libucto.so: undefined reference to `folia::UnicodeToUTF8[abi:cxx11](icu_57::UnicodeString const&)'
Source: ucto Version: 0.8.0-2 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org Dear Maintainer, ucto fails to build from source in unstable/amd64: [..] libtool: link: ( cd ".libs" && rm -f "libucto.la" && ln -s "../libucto.la" "libucto.la" ) g++ -DHAVE_CONFIG_H -I. -I.. -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -DSYSCONF_PATH=\"/etc\" -I/usr/include/libxml2 -g -O2 -fdebug-prefix-map=/home/lamby/temp/cdt.20160808092914.EeWNGCIr8D.ucto/ucto-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -I/usr/include/libxml2 -fopenmp -c -o ucto.o ucto.cxx /bin/bash ../libtool --tag=CXX --mode=link g++ -DSYSCONF_PATH=\"/etc\" -I/usr/include/libxml2 -g -O2 -fdebug-prefix-map=/home/lamby/temp/cdt.20160808092914.EeWNGCIr8D.ucto/ucto-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -I/usr/include/libxml2 -fopenmp -Wl,-z,relro -o ucto ucto.o libucto.la -lfolia -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -licuio -lxml2 -lticcutils libtool: link: g++ -DSYSCONF_PATH=\"/etc\" -I/usr/include/libxml2 -g -O2 -fdebug-prefix-map=/home/lamby/temp/cdt.20160808092914.EeWNGCIr8D.ucto/ucto-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -I/usr/include/libxml2 -fopenmp -Wl,-z -Wl,relro -o .libs/ucto ucto.o ./.libs/libucto.so -lfolia -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -licuio -lxml2 -lticcutils -fopenmp /usr/bin/ld: warning: libicui18n.so.55, needed by /usr/lib/x86_64-linux-gnu/libfolia.so, may conflict with libicui18n.so.57 /usr/bin/ld: warning: libicuuc.so.55, needed by /usr/lib/x86_64-linux-gnu/libfolia.so, may conflict with libicuuc.so.57 /usr/bin/ld: warning: libicudata.so.55, needed by /usr/lib/x86_64-linux-gnu/libfolia.so, may conflict with libicudata.so.57 /usr/bin/ld: warning: libicuio.so.55, needed by /usr/lib/x86_64-linux-gnu/libfolia.so, may conflict with libicuio.so.57 /usr/lib/x86_64-linux-gnu/libfolia.so: undefined reference to `TiCC::split_at(std::__cxx11::basic_string<char, std::char_traits, std::allocator > const&, std::vector<std::__cxx11::basic_string<char, std::char_traits, std::allocator >, std::allocator<std::__cxx11::basic_string<char, std::char_traits, std::allocator > > >&, std::__cxx11::basic_string<char, std::char_traits, std::allocator > const&)' ./.libs/libucto.so: undefined reference to `folia::UnicodeToUTF8[abi:cxx11](icu_57::UnicodeString const&)' /usr/lib/x86_64-linux-gnu/libfolia.so: undefined reference to `TiCC::split_at_first_of(std::__cxx11::basic_string<char, std::char_traits, std::allocator > const&, std::vector<std::__cxx11::basic_string<char, std::char_traits, std::allocator >, std::allocator<std::__cxx11::basic_string<char, std::char_traits, std::allocator > > >&, std::__cxx11::basic_string<char, std::char_traits, std::allocator > const&)' collect2: error: ld returned 1 exit status Makefile:665: recipe for target 'ucto' failed make[3]: *** [ucto] Error 1 make[3]: Leaving directory '/home/lamby/temp/cdt.20160808092914.EeWNGCIr8D.ucto/ucto-0.8.0/src' Makefile:481: recipe for target 'all-recursive' failed make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory '/home/lamby/temp/cdt.20160808092914.EeWNGCIr8D.ucto/ucto-0.8.0' Makefile:388: recipe for target 'all' failed make[1]: *** [all] Error 2 make[1]: Leaving directory '/home/lamby/temp/cdt.20160808092914.EeWNGCIr8D.ucto/ucto-0.8.0' /usr/share/cdbs/1/class/makefile.mk:77: recipe for target 'debian/stamp-makefile-build' failed make: *** [debian/stamp-makefile-build] Error 2 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- ucto.0.8.0-2.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#831406: yorick: FTBFS: dpkg-shlibdeps: error: no dependency information found for /usr/lib/libmpich.so.12 (used by debian/yorick-mpy-mpich2/usr/lib/yorick/bin/mpy.mpich2)
frames(wall sec) Yorick comprehensive graphics test. Each frame will be described at the terminal. Test 1 Commands: window, 0, wait=1, dpi=100; plg, [0,1] Test 2 Commands: window, 0, wait=1; plg, [0,1] Test 3 Commands: plg, [1,0] Test 4 Commands: logxy, 1, 0 Test 5 Commands: logxy, 0, 0 Test 6 Commands: limits, 1.2, 1.8, 0.2, 0.8 Test 7 Commands: range, 0.4, 0.6 Test 8 Commands: limits Test 9 Commands: fma; plg, sin(x), x Five cycles of a sine wave on a new frame. Before you continue, try clicking with the mouse buttons: Left button zooms in, right button zooms out, middle no zoom In each case, the point where you press the mouse button will be translated to the point where you release the mouse button. Test 10 Commands: pledit, marks=0, width=6, type="dash" Test 11 Commands: plg, r*sin(x), r*cos(x), color=-4-i Test 12 Commands: pltitle, "Colored nested cardioids"; plq 1: A: plg, r*sin(x), r*cos(x) 2: B: plg, r*sin(x), r*cos(x) 3: C: plg, r*sin(x), r*cos(x) 4: D: plg, r*sin(x), r*cos(x) 5: E: plg, r*sin(x), r*cos(x) 6: F: plg, r*sin(x), r*cos(x) Adds the title above the upper tick marks. Test 13 Commands: pledit, color="fg", type=0, marker=i Changes the colors to foreground, types to no lines. Test 14 Commands: pledit, marks=0, type=i Changes line types to solid, dash, dot, dashdo, dashdotdot. Test 15 Commands: plm, y, x Test 16 Commands: plv, v, u, y, x Test 17 Commands: plc, z, y,x; plm, y,x, boundary=1, type=2 Test 18 Commands: plf, zncen(z), y,x; plc, z, y,x Test 19 Commands: palette, ".gp" After each new palette is installed, hit for the next, or q to begin test 20. There are 6 palettes altogether. Test 20 Commands: window, style=".gs" After each new style is installed, hit for the next, or q to begin test 21. There are 5 styles altogether. Test 21 Commands: pli, image Test 22 Commands: pldj, x0, y0, x1, y1 Test 23 Commands: plfp, z, y, x, n Test 24 Commands: plfc, z, y,x; plm, y,x, boundary=1, type=2 Yorick comprehensive plt command test. Each frame will be described at the terminal. Test 1 Justification right|center|left cap|half|base Test 2 Justification right|center|left top|half|bottom Test 3 multiline version, short line first Test 4 multiline version, long line first Test 5 escape sequences, cap|half|base Test 6 escape sequences, top|half|bottom Test 7 multiline escape sequences Test 8 multiline escape sequences part 2 Test 9 text orientation /usr/bin/make -f debian/rules DH_OPTIONS=-a binary-common make[1]: Entering directory '/home/lamby/temp/cdt.20160715182504.pdcokDfkyE.yorick/yorick-2.2.04+dfsg1' dh_testdir dh_testroot dh_prep dh_installdirs dh_install dh_installchangelogs dh_installdocs dh_installexamples dh_installmenu dh_installinfo dh_installdebconf dh_installman dh_link dh_strip -pyorick --dbg-package=yorick-dbg dh_strip -pyorick-dev -pyorick-mpy-openmpi -pyorick-mpy-mpich2 dh_usrlocal dh_compress dh_fixperms dh_installdeb dh_shlibdeps dpkg-shlibdeps: warning: /usr/lib/libmpich.so.12 has an unexpected SONAME (libmpi.so.12) dpkg-shlibdeps: error: no dependency information found for /usr/lib/libmpich.so.12 (used by debian/yorick-mpy-mpich2/usr/lib/yorick/bin/mpy.mpich2) Hint: check if the library actually comes from a package. dh_shlibdeps: dpkg-shlibdeps -Tdebian/yorick-mpy-mpich2.substvars debian/yorick-mpy-mpich2/usr/lib/yorick/bin/mpy.mpich2 returned exit code 2 debian/rules:121: recipe for target 'binary-common' failed make[1]: *** [binary-common] Error 2 make[1]: Leaving directory '/home/lamby/temp/cdt.20160715182504.pdcokDfkyE.yorick/yorick-2.2.04+dfsg1' debian/rules:152: recipe for target 'binary-arch' failed make: *** [binary-arch] Error 2 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- yorick.2.2.04+dfsg1-5.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: Comments regarding ipe_7.2.4-1_amd64.changes
> > please clarify src/ipelib/ipebitmap.cpp > > Can I request that you ask a more specific question, please? In your next upload of this package, please clarify the copyright status of this file (it probably contains some unreferenced copyright holders, I cannot recall now). Hope that helps :) Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding apertium-isl-eng_0.1.0~r66083-1_amd64.changes
lexchoicebil.xsl ... -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding apertium-isl-eng_0.1.0~r66083-1_amd64.changes
lexchoicebil.xsl -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding apertium-isl-eng_0.1.0~r66083-1_amd64.changes
lexchoicebil.xsl again.. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding apertium-isl-eng_0.1.0~r66083-1_amd64.changes
Another missing alicante reference.. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding apertium-isl-eng_0.1.0~r66083-1_amd64.changes
please clarify lexchoicebil.xsl on next upload -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding apertium-isl-eng_0.1.0~r66083-1_amd64.changes
please clarify lexchoicebil.xsl on next upload -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding python-vispy_0.4.0-1_i386.changes
please check vispy/util/svg/geometry.py (and maybe a few others, I stopped looking) /lamby -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#829166: jhdf: FTBFS: dh_clean: Please specify the compatibility level in debian/compat
-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up default-jdk (2:1.8-57) ... Setting up jhdf-build-deps (2.11.0+dfsg-1) ... Processing triggers for libc-bin (2.22-13) ... Processing triggers for systemd (230-3) ... Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.34.0-1) ... ** ** Environment ** ** PATH=/home/lamby/git/projects/dotfiles/dotfiles/..//bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin HOSTNAME=f0487e8bb196 TERM=xterm PAGER=more DISPLAY=:0 DOCKER_IMAGE=lamby-debian-sid DEB_BUILD_OPTIONS=parallel=9 PIP_DOWNLOAD_CACHE=/home/lamby/.cache/pip HOME=/home/lamby LOGNAME=lamby SHLVL=1 PWD=/home/lamby/temp/cdt.20160701082958.uaoL0V1h5X.jhdf/jhdf-2.11.0+dfsg OLDPWD=/home/lamby/temp/cdt.20160701082958.uaoL0V1h5X.jhdf GPG_TTY=/dev/console QUILT_PATCHES=debian/patches QUILT_NO_DIFF_INDEX=1 QUILT_REFRESH_ARGS=-p ab --no-timestamps --no-index DEBEMAIL=la...@debian.org DEBFULLNAME=Chris Lamb EDITOR=vim LESS=-cgiFx4M BLASTER=A220 I5 D1 H5 P330 T6 _=/usr/bin/env ** ** Building jhdf 2.11.0+dfsg-1 on amd64 ** ** dpkg-buildpackage -rfakeroot -D -us -uc -b dpkg-buildpackage: info: source package jhdf dpkg-buildpackage: info: source version 2.11.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Gilles Filippini <p...@debian.org> dpkg-source --before-build jhdf-2.11.0+dfsg dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean debian/rules:8: warning: overriding recipe for target 'debian/stamp-autotools-files' /usr/share/cdbs/1/class/autotools-files.mk:68: warning: ignoring old recipe for target 'debian/stamp-autotools-files' test -x debian/rules rm -f debian/stamp-makefile-build debian/stamp-makefile-install /usr/bin/make -C . -k distclean make[1]: Entering directory '/home/lamby/temp/cdt.20160701082958.uaoL0V1h5X.jhdf/jhdf-2.11.0+dfsg' make[1]: *** No rule to make target 'distclean'. make[1]: Leaving directory '/home/lamby/temp/cdt.20160701082958.uaoL0V1h5X.jhdf/jhdf-2.11.0+dfsg' /usr/share/cdbs/1/class/makefile.mk:91: recipe for target 'makefile-clean' failed make: [makefile-clean] Error 2 (ignored) rm -f debian/stamp-autotools rmdir --ignore-fail-on-non-empty . rmdir: failed to remove '.': Invalid argument /usr/share/cdbs/1/class/autotools.mk:64: recipe for target 'makefile-clean' failed make: [makefile-clean] Error 1 (ignored) set -e; dh_clean dh_clean: Please specify the compatibility level in debian/compat /usr/share/cdbs/1/rules/debhelper.mk:217: recipe for target 'clean' failed make: *** [clean] Error 2 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- jhdf.2.11.0+dfsg-1.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#828984: dune-functions: FTBFS: 63% tests passed, 3 tests failed out of 8
Source: dune-functions Version: 2.4~20160406ge6b3b4c-1 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org Dear Maintainer, dune-functions fails to build from source in unstable/amd64: [..] make[3]: Entering directory '/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu' cd "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/examples" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu/examples" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu/examples/CMakeFiles/stokes-taylorhood.dir/DependInfo.cmake" --color= make[3]: Entering directory '/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu' cd "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/examples" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu/examples" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu/examples/CMakeFiles/advection-reaction-dg.dir/DependInfo.cmake" --color= make[3]: Entering directory '/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu' cd "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/examples" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu/examples" "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu/examples/CMakeFiles/poisson-pq2.dir/DependInfo.cmake" --color= Scanning dependencies of target poisson-pq2 make[3]: Leaving directory '/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/poisson-pq2.dir/build.make examples/CMakeFiles/poisson-pq2.dir/build make[3]: Entering directory '/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu' Scanning dependencies of target stokes-taylorhood Scanning dependencies of target advection-reaction-dg make[3]: Leaving directory '/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu' make[3]: Leaving directory '/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/advection-reaction-dg.dir/build.make examples/CMakeFiles/advection-reaction-dg.dir/build make -f examples/CMakeFiles/stokes-taylorhood.dir/build.make examples/CMakeFiles/stokes-taylorhood.dir/build make[3]: Entering directory '/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu' make[3]: Entering directory '/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu' [ 16%] Building CXX object examples/CMakeFiles/poisson-pq2.dir/poisson-pq2.cc.o cd "/home/lamby/temp/cdt.20160629153731.qPUdNMHeCo.dune-functions/dune-functions-2.4~20160406ge6b3b4c/obj-x86_64-linux-gnu/examples" && /usr/bin/c++ -DHAVE_CONFIG_H
Comments regarding ipe_7.2.4-1_amd64.changes
please clarify src/ipelib/ipebitmap.cpp -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#828716: python-hdf5storage: FTBFS: sphinx.ext.mathjax: other math package is already loaded
:amd64 (1.8.16+docs-8) ... Setting up python-h5py (2.6.0-1+b1) ... Setting up python-alabaster (0.7.8-1) ... Setting up python-babel-localedata (2.3.4+dfsg.1-2) ... Setting up python-tz (2015.7+dfsg-0.1) ... Setting up python-babel (2.3.4+dfsg.1-2) ... update-alternatives: using /usr/bin/pybabel-python2 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python-roman (2.0.0-2) ... Setting up sgml-base (1.28) ... Setting up xml-core (0.13+nmu2) ... Setting up python-imagesize (0.7.1-1) ... Setting up python-markupsafe (0.23-2+b2) ... Setting up python-jinja2 (2.8-1) ... Setting up python-pygments (2.1.3+dfsg-1) ... Setting up libjs-jquery (1.12.4-1) ... Setting up libjs-underscore (1.7.0~dfsg-1) ... Setting up libjs-sphinxdoc (1.4.4-2) ... Setting up sphinx-common (1.4.4-2) ... Setting up python-nose (1.3.7-1) ... Setting up python-setuptools (20.10.1-1.1) ... Setting up python-decorator (4.0.6-1) ... Setting up python-scipy (0.17.1-1) ... Setting up python3-all (3.5.1-4) ... Setting up python3-numpy (1:1.11.1~rc1-1) ... Setting up python3-six (1.10.0-3) ... Setting up python3-h5py (2.6.0-1+b1) ... Setting up python3-pkg-resources (20.10.1-1.1) ... Setting up python3-nose (1.3.7-1) ... Setting up python3-setuptools (20.10.1-1.1) ... Setting up python3-decorator (4.0.6-1) ... Setting up python3-scipy (0.17.1-1) ... Processing triggers for sgml-base (1.28) ... Setting up docutils-common (0.12+dfsg-1) ... Processing triggers for sgml-base (1.28) ... Setting up python-docutils (0.12+dfsg-1) ... update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python-sphinx (1.4.4-2) ... Setting up python-numpydoc (0.5-2) ... Setting up python-hdf5storage-build-deps (0.1.13-1) ... Processing triggers for libc-bin (2.22-12) ... ** ** Environment ** ** PATH=/home/lamby/git/projects/dotfiles/dotfiles/..//bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin HOSTNAME=53e0310eb5a5 TERM=xterm PAGER=more DISPLAY=:0 DOCKER_IMAGE=lamby-debian-sid DEB_BUILD_OPTIONS=parallel=9 PIP_DOWNLOAD_CACHE=/home/lamby/.cache/pip HOME=/home/lamby LOGNAME=lamby SHLVL=1 PWD=/home/lamby/temp/cdt.20160627075546.TwGD1OkcVX.python-hdf5storage/python-hdf5storage-0.1.13 OLDPWD=/home/lamby/temp/cdt.20160627075546.TwGD1OkcVX.python-hdf5storage GPG_TTY=/dev/console QUILT_PATCHES=debian/patches QUILT_NO_DIFF_INDEX=1 QUILT_REFRESH_ARGS=-p ab --no-timestamps --no-index DEBEMAIL=la...@debian.org DEBFULLNAME=Chris Lamb EDITOR=vim LESS=-cgiFx4M BLASTER=A220 I5 D1 H5 P330 T6 _=/usr/bin/env ** ** Building python-hdf5storage 0.1.13-1 on amd64 ** ** dpkg-buildpackage -rfakeroot -D -us -uc -b dpkg-buildpackage: info: source package python-hdf5storage dpkg-buildpackage: info: source version 0.1.13-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Ghislain Antony Vaillant <ghisv...@gmail.com> dpkg-source --before-build python-hdf5storage-0.1.13 dpkg-buildpackage: info: host architecture amd64 fa
Bug#828017: frog: please make the build reproducible
Source: frog Version: 0.12.20-1 Severity: wishlist Tags: patch User: reproducible-bui...@lists.alioth.debian.org Usertags: randomness X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org Hi, Whilst working on the "reproducible builds" effort [0], we noticed that frog could not be built reproducibly due to it including .pyo and .pyc files via upstream's ./py-compile. Patch attached. [0] https://wiki.debian.org/ReproducibleBuilds Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- --- a/debian/rules 2016-06-23 15:25:51.762816987 +0200 --- b/debian/rules 2016-06-23 21:43:10.202744894 +0200 @@ -5,6 +5,7 @@ include /usr/share/cdbs/1/rules/debhelper.mk include /usr/share/cdbs/1/class/python-distutils.mk +DEB_DH_INSTALL_ARGS_frog = -X.pyc -X.pyo DEB_PYTHON2_MODULE_PACKAGES = frog libfrog1 include /usr/share/cdbs/1/class/autotools.mk -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
python-vispy_0.4.0-1_i386.changes REJECTED
please clarify twitter.js, vispy/ext/png.py.. in fact, everything under ext/ - I stopped looking after that. :) === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#824830: etsf-io: FTBFS: cp: cannot stat './AUTHORS-XAUTHORS': No such file or directory
debian/tmp//usr/share/doc/libetsf-io-doc' make[4]: Leaving directory '/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4/doc/www' make[3]: Leaving directory '/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4/doc/www' make[2]: Leaving directory '/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4/doc/www' make[2]: Entering directory '/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4' make[3]: Entering directory '/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4' make[3]: Nothing to be done for 'install-exec-am'. test -z "/usr/share/man/man1" || /bin/mkdir -p "/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4/debian/tmp//usr/share/man/man1" /usr/bin/install -c -m 644 doc/etsf_io.1 '/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4/debian/tmp//usr/share/man/man1' make[3]: Leaving directory '/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4' make[2]: Leaving directory '/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4' make[1]: Leaving directory '/home/lamby/temp/cdt.20160520091739.FsMSv1BkSf.etsf-io/etsf-io-1.0.4' touch debian/stamp-makefile-install Adding cdbs dependencies to debian/libetsf-io-doc.substvars dh_installdirs -plibetsf-io-doc \ dh_installdocs -plibetsf-io-doc ./README ./NEWS ./TODO ./AUTHORS-XAUTHORS -XREADME -XNEWS -XTODO cp: cannot stat './AUTHORS-XAUTHORS': No such file or directory dh_installdocs: cp --reflink=auto -a ./AUTHORS-XAUTHORS debian/libetsf-io-doc/usr/share/doc/libetsf-io-doc returned exit code 1 /usr/share/cdbs/1/rules/debhelper.mk:240: recipe for target 'binary-install/libetsf-io-doc' failed make: *** [binary-install/libetsf-io-doc] Error 2 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- etsf-io.1.0.4-1~exp1.1.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding r-cran-knitr_1.12.3-1_amd64.changes
Please look at inst/misc/framed.sty (and others?) on next upload. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding r-cran-markdown_0.7.7-1_amd64.changes
For next upload please check RStudio and R Foundation copyrights (probably more, I stopped looking) -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding pyfr_1.3.0-1_amd64.changes
Please check (at least) doc/ext/tikz.py -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#820866: r-cran-tgp: FTBFS: cmath:171:3: error: template with C linkage
: previous declaration 'float std::pow(float, float)' pow(float __x, float __y) ^ /usr/include/c++/5/cmath: At global scope: /usr/include/c++/5/cmath:431:3: error: template with C linkage template ^ /usr/include/c++/5/cmath: In function 'long double std::sin(long double)': /usr/include/c++/5/cmath:448:22: error: conflicting declaration of C function 'long double std::sin(long double)' sin(long double __x) ^ /usr/include/c++/5/cmath:444:3: note: previous declaration 'float std::sin(float)' sin(float __x) ^ /usr/include/c++/5/cmath: At global scope: /usr/include/c++/5/cmath:452:3: error: template with C linkage template ^ /usr/include/c++/5/cmath: In function 'long double std::sinh(long double)': /usr/include/c++/5/cmath:467:23: error: conflicting declaration of C function 'long double std::sinh(long double)' sinh(long double __x) ^ /usr/include/c++/5/cmath:463:3: note: previous declaration 'float std::sinh(float)' sinh(float __x) ^ /usr/include/c++/5/cmath: At global scope: /usr/include/c++/5/cmath:471:3: error: template with C linkage template ^ /usr/include/c++/5/cmath: In function 'long double std::sqrt(long double)': /usr/include/c++/5/cmath:486:23: error: conflicting declaration of C function 'long double std::sqrt(long double)' sqrt(long double __x) ^ /usr/include/c++/5/cmath:482:3: note: previous declaration 'float std::sqrt(float)' sqrt(float __x) ^ /usr/include/c++/5/cmath: At global scope: /usr/include/c++/5/cmath:490:3: error: template with C linkage template ^ /usr/include/c++/5/cmath: In function 'long double std::tan(long double)': /usr/include/c++/5/cmath:505:22: error: conflicting declaration of C function 'long double std::tan(long double)' tan(long double __x) ^ /usr/include/c++/5/cmath:501:3: note: previous declaration 'float std::tan(float)' tan(float __x) ^ /usr/include/c++/5/cmath: At global scope: /usr/include/c++/5/cmath:509:3: error: template with C linkage template ^ /usr/include/c++/5/cmath: In function 'long double std::tanh(long double)': /usr/include/c++/5/cmath:524:23: error: conflicting declaration of C function 'long double std::tanh(long double)' tanh(long double __x) ^ /usr/include/c++/5/cmath:520:3: note: previous declaration 'float std::tanh(float)' tanh(float __x) ^ /usr/include/c++/5/cmath: At global scope: /usr/include/c++/5/cmath:528:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:831:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:841:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:850:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:859:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:868:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:877:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:890:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:899:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:908:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:917:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:926:3: error: template with C linkage template ^ /usr/include/c++/5/cmath:935:3: error: template with C linkage template ^ /usr/lib/R/etc/Makeconf:139: recipe for target 'base.o' failed make[1]: *** [base.o] Error 1 make[1]: Leaving directory '/home/lamby/temp/cdt.20160413100854.Po7RDyxvZA.r-cran-tgp/r-cran-tgp-2.4-9/src' make[1]: Entering directory '/home/lamby/temp/cdt.20160413100854.Po7RDyxvZA.r-cran-tgp/r-cran-tgp-2.4-9/src' make[1]: Leaving directory '/home/lamby/temp/cdt.20160413100854.Po7RDyxvZA.r-cran-tgp/r-cran-tgp-2.4-9/src' ERROR: compilation failed for package 'tgp' * removing '/home/lamby/temp/cdt.20160413100854.Po7RDyxvZA.r-cran-tgp/r-cran-tgp-2.4-9/debian/r-cran-tgp/usr/lib/R/site-library/tgp' /usr/share/R/debian/r-cran.mk:98: recipe for target 'R_any_arch' failed make: *** [R_any_arch] Error 1 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- r-cran-tgp.2.4-9-1.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Comments regarding python-arrayfire_3.3.20160328-1_amd64.changes
Check examples/financial/heston_model.py etc for next upload please -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#818990: flint: FTBFS: recipe for target '../build/fmpz_poly/test/t-taylor_shift_multi_mod_threaded_RUN' failed
Source: flint Version: 2.5.2-3 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org Dear Maintainer, flint fails to build from source in unstable/amd64: [..] hensel_lift_without_only_inversetaylor_shift_multi_modPASS zeroPASS evaluate_fmpqPASS gcd_heuristicFAIL 19 -249235319812053768066756523017109383 2417851639229258349412224 -143562377820341249335529306112 7091896 -87106970317851321012376281599601035706368 19342813113834066795298800 169479165610967355730377935627850121184 7 76162400418194400863059971 2700991936471983835044812564682474750207 -43555976812380727428966865999506794610687 0 10383959891769541142360244306968575 166153484579148386461870350057605119 -5178 151115727451828646838256 -590295529431338319871 -10859 77371216680990428173958912 19 6083557938917753236783704797683427523495684845336950844019413341416788041 271707040221959526865449737324140237736411775104025377790150078462787006 5730548927805000137797421964569656040204835178555387991809577139656956 75836098062280676122546260568231565599662259404231713775228991805031 705654275594260756243784143367787580921523546885307934518426686391 4902726355120462779172919069736859933779749733627802768727163194 26358436556034608376627609487437609960724545429573349106844151 112122927770399830703496118575185290165594233562123188634271 382551520068520819383837979317788050636970678659128670027 1054729483612562412331302998829076538187385757720244544 2355471385934983047337450650878590160556432239809787 4250790781886725309557011318221154075545740908110 6152920791741929644696503799886150453398158490 7046673105180744371220272929491465999645111 6244835997017341302027221898668276908742 4132232256094232151858562213317703816 1922564635280684795214156006953344 561250805803904565973897936789 77371216680990428173958912 ../Makefile.subdirs:91: recipe for target '../build/fmpz_poly/test/t-taylor_shift_multi_mod_threaded_RUN' failed make[3]: *** [../build/fmpz_poly/test/t-taylor_shift_multi_mod_threaded_RUN] Aborted (core dumped) make[3]: *** Waiting for unfinished jobs PASS PASS PASS PASS PASS PASS PASS PASS make[3]: Leaving directory '/home/lamby/temp/cdt.20160322235513.FJmzQ8b0pI/flint-2.5.2/fmpz_poly' Makefile:211: recipe for target 'check' failed make[2]: *** [check] Error 2 make[2]: Leaving directory '/home/lamby/temp/cdt.20160322235513.FJmzQ8b0pI/flint-2.5.2' dh_auto_test: make -j9 check VERBOSE=1 AT= QUIET_CXX= QUIET_CC= QUIET_AR= INCS=-I/home/lamby/temp/cdt.20160322235513.FJmzQ8b0pI/flint-2.5.2 ABI_FLAG=-Wl,-z,relro returned exit code 2 debian/rules:28: recipe for target 'override_dh_auto_test' failed make[1]: *** [override_dh_auto_test] Error 2 make[1]: Leaving directory '/home/lamby/temp/cdt.20160322235513.FJmzQ8b0pI/flint-2.5.2' debian/rules:9: recipe for target 'build' failed make: *** [build] Error 2 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- flint.2.5.2-3.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#816579: arachne-pnr: FTBFS: src/chipdb.cc:852: void ChipDB::finalize(): Assertion `tile_pos_cell[t][pos] == 0' failed.
Source: arachne-pnr Version: 0~20150927gitefdb026-2 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org Dear Maintainer, arachne-pnr fails to build from source in unstable/amd64: [..] g++ -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -Isrc -std=c++11 -Wall -Wshadow -Wsign-compare -Werror -fPIE -pie -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o bin/arachne-pnr src/arachne-pnr.o src/netlist.o src/blif.o src/pack.o src/place.o src/util.o src/io.o src/route.o src/chipdb.o src/location.o src/configuration.o src/line_parser.o src/pcf.o src/global.o src/constant.o src/designstate.o -lm mkdir -p share/arachne-pnr bin/arachne-pnr -d 1k -c /usr/share/fpga-icestorm/chipdb/chipdb-1k.txt --write-binary-chipdb share/arachne-pnr/chipdb-1k.bin seed: 1 device: 1k read_chipdb /usr/share/fpga-icestorm/chipdb/chipdb-1k.txt... arachne-pnr: src/chipdb.cc:852: void ChipDB::finalize(): Assertion `tile_pos_cell[t][pos] == 0' failed. Makefile:25: recipe for target 'share/arachne-pnr/chipdb-1k.bin' failed make[1]: *** [share/arachne-pnr/chipdb-1k.bin] Aborted (core dumped) make[1]: Leaving directory '/home/lamby/temp/cdt.20160303075549.jMwsadjjqr/arachne-pnr-0~20150927gitefdb026' dh_auto_build: make -j1 returned exit code 2 debian/rules:11: recipe for target 'build' failed make: *** [build] Error 2 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- arachne-pnr.0~20150927gitefdb026-2.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#815741: r-cran-arm: FTBFS: ERROR: dependencies 'MASS', 'Matrix', 'lme4', 'abind', 'coda', 'nlme' are not available for package 'arm'
Source: r-cran-arm Version: 1.8-6-1 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org Dear Maintainer, r-cran-arm fails to build from source in unstable/amd64: [..] dpkg-buildpackage -rfakeroot -D -us -uc -b dpkg-buildpackage: source package r-cran-arm dpkg-buildpackage: source version 1.8-6-1 dpkg-buildpackage: source distribution unstable dpkg-buildpackage: source changed by Daniel Pocock <dan...@pocock.pro> dpkg-source --before-build r-cran-arm-1.8-6 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean test -x debian/rules dh_clean if test -d src; then \ find src -regex ".*\.o" | \ xargs --no-run-if-empty -r rm; \ fi rm -f config.log config.status debian/rules build test -x debian/rules mkdir -p "." fakeroot debian/rules binary test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "." dh_installdirsusr/lib/R/site-library echo "R:Depends=r-base-core (>= 3.2.3-6), r-api-3" >> debian/r-cran-arm.substvars if test -f /usr/bin/xvfb-run; then\ xvfb-run -a\ R CMD INSTALL -l /home/lamby/temp/cdt.20160224081417.Fxz5143g8S/r-cran-arm-1.8-6/debian/r-cran-arm/usr/lib/R/site-library --clean \ . \ "--built-timestamp=\"Thu, 18 Feb 2016 21:43:55 +0100\"" \ ; \ else\ R CMD INSTALL -l /home/lamby/temp/cdt.20160224081417.Fxz5143g8S/r-cran-arm-1.8-6/debian/r-cran-arm/usr/lib/R/site-library \ --clean . \ "--built-timestamp=\"Thu, 18 Feb 2016 21:43:55 +0100\"" \ ; \ fi ERROR: dependencies 'MASS', 'Matrix', 'lme4', 'abind', 'coda', 'nlme' are not available for package 'arm' * removing '/home/lamby/temp/cdt.20160224081417.Fxz5143g8S/r-cran-arm-1.8-6/debian/r-cran-arm/usr/lib/R/site-library/arm' /usr/share/R/debian/r-cran.mk:98: recipe for target 'R_any_arch' failed make: *** [R_any_arch] Error 1 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- r-cran-arm.1.8-6-1.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#815744: ros-pluginlib: FTBFS: dh_install: pluginlib-dev missing files: usr/lib/*/pluginlib
Source: ros-pluginlib Version: 1.10.1-2 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org Dear Maintainer, ros-pluginlib fails to build from source in unstable/amd64: [..] running install running install_egg_info Creating /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/lib/python2.7/dist-packages/ Writing /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/lib/python2.7/dist-packages/pluginlib-1.10.1.egg-info -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/pluginlib.pc -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/share/pluginlib/cmake/pluginlibConfig.cmake -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/share/pluginlib/cmake/pluginlibConfig-version.cmake -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/share/pluginlib/package.xml -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/lib/pluginlib/plugin_tool -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/include/pluginlib -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/include/pluginlib/class_desc.h -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/include/pluginlib/class_list_macros.h -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/include/pluginlib/class_loader_base.h -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/include/pluginlib/class_loader_imp.h -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/include/pluginlib/class_loader.h -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/include/pluginlib/pluginlib_exceptions.h -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/share/pluginlib/typed_class_loader_template.cpp -- Installing: /home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/debian/tmp/usr/lib/pluginlib/plugin_macro_update make[2]: Leaving directory '/home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1/build' make[1]: Leaving directory '/home/lamby/temp/cdt.20160224081630.7zpa0JrVPD/ros-pluginlib-1.10.1' dh_install -O--buildsystem=cmake -O--builddirectory=build dh_install: pluginlib-dev missing files: usr/lib/*/pluginlib dh_install: missing files, aborting debian/rules:6: recipe for target 'binary' failed make: *** [binary] Error 2 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `- ros-pluginlib.1.10.1-2.unstable.amd64.log.txt.gz Description: Binary data -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
