Processed: Re: python-cartopy: FTBFS on *i386: test_lambert_azimuthal_equal_area fails

2017-01-31 Thread Debian Bug Tracking System
Processing control commands:

> reassign -1 src:proj
Bug #848634 [src:python-cartopy] python-cartopy: FTBFS on *i386: 
test_lambert_azimuthal_equal_area fails
Bug reassigned from package 'src:python-cartopy' to 'src:proj'.
No longer marked as found in versions python-cartopy/0.14.2+dfsg1-1.
Ignoring request to alter fixed versions of bug #848634 to the same values 
previously set

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Processed: your mail

2017-01-31 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> forwarded 853541 https://github.com/Macaulay2/mathicgb/issues/8
Bug #853541 [src:mathicgb] mathicgb: ftbfs with GCC-7
Set Bug forwarded-to-address to 
'https://github.com/Macaulay2/mathicgb/issues/8'.
> thanks
Stopping processing here.

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Processed: your mail

2017-01-31 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> forwarded 853399 https://github.com/linbox-team/fflas-ffpack/issues/74
Bug #853399 [src:fflas-ffpack] fflas-ffpack: ftbfs with GCC-7
Set Bug forwarded-to-address to 
'https://github.com/linbox-team/fflas-ffpack/issues/74'.
> thanks
Stopping processing here.

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Bug#843728: marked as done (pytango: enable parallel builds)

2017-02-01 Thread Debian Bug Tracking System
Your message dated Wed, 01 Feb 2017 08:49:12 +
with message-id 
and subject line Bug#843728: fixed in pytango 9.2.1-1~exp1
has caused the Debian Bug report #843728,
regarding pytango: enable parallel builds
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


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Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: pytango
Version: 9.2.0-2
Severity: wishlist

Hi,

Your package takes some time to build, yet it doesn't enable
parallel builds. It would be nice if you could enable that (just
add --parallel to the dh call, or bump the debhelper compat to 10),
provided that that works fine with your package.

Thanks,
Emilio

-- System Information:
Debian Release: stretch/sid
  APT prefers unstable
  APT policy: (800, 'unstable'), (700, 'experimental'), (650, 'testing'), (500, 
'unstable-debug')
Architecture: amd64 (x86_64)
Foreign Architectures: i386, armhf

Kernel: Linux 4.7.0-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_GB.utf8, LC_CTYPE=en_GB.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
--- End Message ---
--- Begin Message ---
Source: pytango
Source-Version: 9.2.1-1~exp1

We believe that the bug you reported is fixed in the latest version of
pytango, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 843...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sandor Bodo-Merle  (supplier of updated pytango package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 31 Jan 2017 12:56:49 +0100
Source: pytango
Binary: python-pytango python-tango python3-pytango python3-tango 
python-tango-doc
Architecture: source
Version: 9.2.1-1~exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Sandor Bodo-Merle 
Description:
 python-pytango - transitional dummy package for python-tango
 python-tango - API for the TANGO control system (Python 2)
 python-tango-doc - API for the TANGO control system
 python3-pytango - transitional dummy package for python3-tango
 python3-tango - API for the TANGO control system (Python 3)
Closes: 843728
Changes:
 pytango (9.2.1-1~exp1) experimental; urgency=medium
 .
   * Import Upstream version 9.2.1
   * debian/patch
 - drop 0001-correct-typo-s-lenght-length.patch (aplied upstream)
   * Use compat level 10 (Closes: #843728)
Checksums-Sha1:
 06dfec42efcfccf29cbcadc73b02b98a56d82ea7 2568 pytango_9.2.1-1~exp1.dsc
 7a6439a5672a2f92775ab4f0a41988c17f414ed5 3336297 pytango_9.2.1.orig.tar.gz
 e0eaa140e795330ae4a97d1c00dfce1397192f85 5224 
pytango_9.2.1-1~exp1.debian.tar.xz
 5cb317437465fdcab398f00815b3e3ccd0d0a579 7594 
pytango_9.2.1-1~exp1_source.buildinfo
Checksums-Sha256:
 0ebe992b3c9bc9826a0214d3cac9e39ff6e737cacccab0492f19633137a40346 2568 
pytango_9.2.1-1~exp1.dsc
 6c665e3d7a705645d0421126ef13df8119b0a1440a0f0406b156747d96f0e34c 3336297 
pytango_9.2.1.orig.tar.gz
 c3f80b8f789975099f6bb400671305877598eafa7288bbddd8bf7a0329935c50 5224 
pytango_9.2.1-1~exp1.debian.tar.xz
 d2b9453a6357aea3e560a13f20ea74ad1ea15b56d8810e9e4b784bade1cb81f2 7594 
pytango_9.2.1-1~exp1_source.buildinfo
Files:
 cd97b10fbd06c48b405e9da8d1b5d20e 2568 science extra pytango_9.2.1-1~exp1.dsc
 af0f9b4ae2c92cf108505aeb5b483ea8 3336297 science extra 
pytango_9.2.1.orig.tar.gz
 c24d6a2011a76057d1aee9eb43c11333 5224 science extra 
pytango_9.2.1-1~exp1.debian.tar.xz
 d23d54a7f16eb6abf5f87433dc18e7b0 7594 science extra 
pytango_9.2.1-1~exp1_source.buildinfo

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ayT+DuBRAslv7vE1CpB

Bug#852305: marked as done (depends on non existing package libblosc1)

2017-02-01 Thread Debian Bug Tracking System
Your message dated Wed, 1 Feb 2017 10:03:19 +0100
with message-id <88251549-cdff-856f-3eb0-fd5ec3e35...@danielstender.com>
and subject line Re: depends on non existing package libblosc1
has caused the Debian Bug report #852305,
regarding depends on non existing package libblosc1
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
852305: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=852305
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: python-bcolz
Version: 1.1.0+ds1-2
Severity: serious

Dear Maintainer,

on searching what to install to make

[…]/pkg-fio> tools/hist/fiologparser_hist.py
Traceback (most recent call last):
  File "tools/hist/fiologparser_hist.py", line 18, in 
import pandas
ImportError: No module named pandas

work, I came across python-bcolz.

Yet this is not installable:

[…]~> LANG=C sudo apt install python-bcolz
Reading package lists... Done
Building dependency tree
Reading state information... Done
Some packages could not be installed. This may mean that you have
requested an impossible situation or if you are using the unstable
distribution that some required packages have not yet been created
or been moved out of Incoming.
The following information may help to resolve the situation:

The following packages have unmet dependencies:
 python-bcolz : Depends: libblosc1 (>= 1.9.0) but it is not installable
Recommends: python-numexpr but it is not installable
E: Unable to correct problems, you have held broken packages.


[…]~> LANG=C apt-cache policy libblosc1
libblosc1:
  Installed: (none)
  Candidate: (none)
  Version table:

[…]~> LANG=C apt-cache policy python-numexpr
python-numexpr:
  Installed: (none)
  Candidate: (none)
  Version table:


I see no bcolz related upload in 2017, so this issue may be there for quite
some time already.

Thanks,
Martin

-- System Information:
Debian Release: 9.0
  APT prefers experimental
  APT policy: (200, 'experimental')

This is crap. This is unstable with *some* packages from experimental. It does
certainly not prefer experimental.

Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.10.0-rc5-tp520+ (SMP w/4 CPU cores; PREEMPT)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: sysvinit (via /sbin/init)
--- End Message ---
--- Begin Message ---
On Thu, 26 Jan 2017 11:32:24 +0100 Daniel Stender  
wrote:
> Tell me if I miss something ... otherwise I'm going to close this issue in 
> the next days.

DS

-- 
4096R/DF5182C8
Debian Developer (sten...@debian.org)
http://www.danielstender.com/



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Processed: closing

2017-02-01 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> close 689850
Bug #689850 [libcoin60-doc] libcoin60-doc: no whatis info in manpages
Marked Bug as done
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Bug#831245: marked as done (gts: FTBFS: Tests failures)

2017-02-02 Thread Debian Bug Tracking System
Your message dated Thu, 02 Feb 2017 13:48:48 +
with message-id 
and subject line Bug#831245: fixed in gts 0.7.6+darcs121130-3
has caused the Debian Bug report #831245,
regarding gts: FTBFS: Tests failures
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
831245: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831245
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: gts
Version: 0.7.6+darcs121130-1.2
Severity: serious
Tags: stretch sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20160714 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part (hopefully):
> Makefile:693: recipe for target 'test-suite.log' failed
> make[6]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130/test/boolean'
> Makefile:799: recipe for target 'check-TESTS' failed
> make[5]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130/test/boolean'
> make[4]: *** [check-am] Error 2
> Makefile:872: recipe for target 'check-am' failed
> make[4]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130/test/boolean'
> make[3]: *** [check-recursive] Error 1
> Makefile:372: recipe for target 'check-recursive' failed
> make[3]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130/test'
> make[2]: *** [check-recursive] Error 1
> Makefile:475: recipe for target 'check-recursive' failed
> make[2]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130'
> dh_auto_test: make -j1 check VERBOSE=1 returned exit code 2
> make[1]: *** [override_dh_auto_test] Error 2
> debian/rules:18: recipe for target 'override_dh_auto_test' failed

The full build log is available from:
   
http://people.debian.org/~lucas/logs/2016/07/14/gts_0.7.6+darcs121130-1.2_unstable_gcc5.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Source: gts
Source-Version: 0.7.6+darcs121130-3

We believe that the bug you reported is fixed in the latest version of
gts, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 831...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille  (supplier of updated gts package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 02 Feb 2017 13:57:06 +0100
Source: gts
Binary: libgts-0.7-5 libgts-dev libgts-dbg libgts-bin
Architecture: source amd64
Version: 0.7.6+darcs121130-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Andreas Tille 
Description:
 libgts-0.7-5 - library to deal with 3D computational surface meshes
 libgts-bin - utility binaries for libgts
 libgts-dbg - debugging symbols for libgts
 libgts-dev - development files for libgts
Closes: 831245
Changes:
 gts (0.7.6+darcs121130-3) unstable; urgency=medium
 .
   * Team upload
   * Remove further tests failing for i386 and ppc64el
 Closes: #831245 (for all architectures)
Checksums-Sha1:
 7e9a0251776453d30f3fd38e8e747d0e106add95 2170 gts_0.7.6+darcs121130-3.dsc
 c660aa1e68fb586373272dcfdb67aaeffc23c1a0 13791 
gts_0.7.6+darcs121130-3.debian.tar.bz2
 35348f9004d150810da87164572b9fafabab79d0 6452 
gts_0.7.6+darcs121130-3_amd64.buildinfo
 fc49f4fddeb52db840f34983f6e6124076592a46 157774 
libgts-0.7-5_0.7.6+darcs121130-3_amd64.deb
 3db33dacb86704624830df719fde59f77c733d53 105124 
libgts-bin-dbgsym_0.7.6+darcs121130-3_amd64.deb
 c15b1edb069b95645983b1c8d4717517d69634e0 50668 
libgts-bin_0.7.6+darcs121130-3_amd64.deb
 0b1fb375d759f7cf5d2a1645381d137d7dba2c01 531962 
libgts-dbg_0.7.6+darcs121130-3_amd64.deb
 285964b4c0d14fdb8082bd6e35961ca91ad38fca 178338 
libgts-dev_0.7.6+darcs121130-3_amd64.deb
Checksums-Sha256:
 b26a3feb1fa68452132dc88ade1a872d

Bug#853941: marked as done (Remove myself from Uploaders)

2017-02-02 Thread Debian Bug Tracking System
Your message dated Fri, 3 Feb 2017 08:02:00 +0100
with message-id 

and subject line Re: Bug#853941: Remove myself from Uploaders
has caused the Debian Bug report #853941,
regarding Remove myself from Uploaders
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
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Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:flann


Please remove me from the Uploaders list in d/control. I cannot do it myself:

$ git push
Counting objects: 5, done.
Delta compression using up to 2 threads.
Compressing objects: 100% (5/5), done.
Writing objects: 100% (5/5), 548 bytes | 0 bytes/s, done.
Total 5 (delta 4), reused 0 (delta 0)
remote: error: insufficient permission for adding an object to
repository database ./objects
remote: fatal: failed to write object
error: unpack failed: unpack-objects abnormal exit
To ssh://git.debian.org/git/debian-science/packages/flann.git
 ! [remote rejected] master -> master (unpacker error)
error: failed to push some refs to
'ssh://git.debian.org/git/debian-science/packages/flann.git'


Thanks.
--- End Message ---
--- Begin Message ---
Hi,

On Thu, Feb 2, 2017 at 8:52 PM, Mattia Rizzolo  wrote:
> On Thu, Feb 02, 2017 at 12:24:33PM +0100, Mathieu Malaterre wrote:
>> Package: src:flann
>>
>>
>> Please remove me from the Uploaders list in d/control. I cannot do it myself:
>
> After talking to the alioth admin, I think the permissions are now
> fixed (the idea is that all DD can push to the repos), can you try
> again?

Seems to have worked, maybe someone could remove the false sense of error:

$ git push
Counting objects: 5, done.
Delta compression using up to 2 threads.
Compressing objects: 100% (5/5), done.
Writing objects: 100% (5/5), 543 bytes | 0 bytes/s, done.
Total 5 (delta 4), reused 0 (delta 0)
remote: YAML Error: Couldn't open
/home/groups/debian-science/kgb/kgb-client.conf for input:\nNo such
file or directory
remote:Code: YAML_LOAD_ERR_FILE_INPUT
remote:  at /usr/share/perl5/YAML.pm line 71
remote: Sending notification emails to:
debian-science-comm...@lists.alioth.debian.org,
dispa...@tracker.debian.org
To ssh://git.debian.org/git/debian-science/packages/flann.git
   87b8f9a..fc85bf6  master -> master

Thanks much !--- End Message ---
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Bug#831245: marked as done (gts: FTBFS: Tests failures)

2017-02-03 Thread Debian Bug Tracking System
Your message dated Fri, 03 Feb 2017 10:33:40 +
with message-id 
and subject line Bug#831245: fixed in gts 0.7.6+darcs121130-4
has caused the Debian Bug report #831245,
regarding gts: FTBFS: Tests failures
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
831245: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831245
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: gts
Version: 0.7.6+darcs121130-1.2
Severity: serious
Tags: stretch sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20160714 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part (hopefully):
> Makefile:693: recipe for target 'test-suite.log' failed
> make[6]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130/test/boolean'
> Makefile:799: recipe for target 'check-TESTS' failed
> make[5]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130/test/boolean'
> make[4]: *** [check-am] Error 2
> Makefile:872: recipe for target 'check-am' failed
> make[4]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130/test/boolean'
> make[3]: *** [check-recursive] Error 1
> Makefile:372: recipe for target 'check-recursive' failed
> make[3]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130/test'
> make[2]: *** [check-recursive] Error 1
> Makefile:475: recipe for target 'check-recursive' failed
> make[2]: Leaving directory '/«BUILDDIR»/gts-0.7.6+darcs121130'
> dh_auto_test: make -j1 check VERBOSE=1 returned exit code 2
> make[1]: *** [override_dh_auto_test] Error 2
> debian/rules:18: recipe for target 'override_dh_auto_test' failed

The full build log is available from:
   
http://people.debian.org/~lucas/logs/2016/07/14/gts_0.7.6+darcs121130-1.2_unstable_gcc5.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Source: gts
Source-Version: 0.7.6+darcs121130-4

We believe that the bug you reported is fixed in the latest version of
gts, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 831...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille  (supplier of updated gts package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Fri, 03 Feb 2017 11:04:42 +0100
Source: gts
Binary: libgts-0.7-5 libgts-dev libgts-dbg libgts-bin
Architecture: source amd64
Version: 0.7.6+darcs121130-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Andreas Tille 
Description:
 libgts-0.7-5 - library to deal with 3D computational surface meshes
 libgts-bin - utility binaries for libgts
 libgts-dbg - debugging symbols for libgts
 libgts-dev - development files for libgts
Closes: 831245
Changes:
 gts (0.7.6+darcs121130-4) unstable; urgency=medium
 .
   * Team upload
   * Remove further tests failing for i386 and x32
 Closes: #831245 (for i386 and x32)
Checksums-Sha1:
 e2137248ac56951c9b7b76cdd7bb483c0aada38c 2170 gts_0.7.6+darcs121130-4.dsc
 abff82278f9c783383d6951a790d9ca5306cc6ad 13837 
gts_0.7.6+darcs121130-4.debian.tar.bz2
 158a94684a9e10eadaa19b3895cbdf53c982974e 6452 
gts_0.7.6+darcs121130-4_amd64.buildinfo
 bb7e65e0bda428aa3034a003d881b73cd30161fe 157550 
libgts-0.7-5_0.7.6+darcs121130-4_amd64.deb
 f9742134014858624227fefbb4b06a65864cdc4f 105148 
libgts-bin-dbgsym_0.7.6+darcs121130-4_amd64.deb
 41b4c34d3211db573a61811f46689fb73024c956 50750 
libgts-bin_0.7.6+darcs121130-4_amd64.deb
 e1b6c4be5d72893b2b81865da8d741af4108329f 531986 
libgts-dbg_0.7.6+darcs121130-4_amd64.deb
 786cdfaa6bf12a9771e519676ac3b6f6357e6685 178424 
libgts-dev_0.7.6+darcs121130-4_amd64.deb
Checksums-Sha256:
 3d7dbf72a2194891a485d03f8a002e8d149dc59a915a7bb

Processed: user debian...@lists.debian.org, usertagging 850794, affects 850794, usertagging 854126 ...

2017-02-04 Thread Debian Bug Tracking System
rts
Added indication that 779522 affects usertag, 710257, and piuparts
Added indication that 789038 affects usertag, 710257, and piuparts
Added indication that 831232 affects usertag, 710257, and piuparts
Added indication that 833902 affects usertag, 710257, and piuparts
> found 854059 2016.20170123-1
Bug #854059 [texlive-lang-japanese] texlive-base: failure during 
texlive-lang-japanese jessie->stretch upgrade test
Bug #852611 [texlive-lang-japanese] needs stricter dependency on new 
texlive-base for ptex-fontmap changes
Bug #853937 [texlive-lang-japanese] [package:tex-common] dist-upgrade fails on 
ann error of updmap-sys, teaving tex-common unconfigured
Bug #853939 [texlive-lang-japanese] upgrade failed
Bug #853946 [texlive-lang-japanese] tex-common: apt upgrade fails for tex-common
Bug #853948 [texlive-lang-japanese] tex-common: aptitude dist-upgrade and 
install fails with tex-common updmap-sys failed
Marked as found in versions texlive-lang/2016.20170123-1.
Marked as found in versions texlive-lang/2016.20170123-1.
Marked as found in versions texlive-lang/2016.20170123-1.
Marked as found in versions texlive-lang/2016.20170123-1.
Marked as found in versions texlive-lang/2016.20170123-1.
Marked as found in versions texlive-lang/2016.20170123-1.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
760853: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=760853
771085: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=771085
779521: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=779521
779522: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=779522
782155: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=782155
782156: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=782156
789038: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=789038
807216: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=807216
825265: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=825265
831232: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831232
833902: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=833902
843312: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=843312
843315: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=843315
845848: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=845848
846219: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=846219
847354: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=847354
850794: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=850794
851264: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=851264
852125: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=852125
852611: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=852611
852925: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=852925
853937: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853937
853939: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853939
853946: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853946
853948: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853948
854059: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=854059
854126: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=854126
Debian Bug Tracking System
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Processed (with 1 error): your mail

2017-02-05 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 850243 glm 0.9.8.3-1
Bug #850243 {Done: Ghislain Antony Vaillant } [src:forge] 
forge: FTBFS on multiple architectures
Bug reassigned from package 'src:forge' to 'glm'.
No longer marked as found in versions forge/0.9.2-2.
No longer marked as fixed in versions glm/0.9.8.3-2.
Bug #850243 {Done: Ghislain Antony Vaillant } [glm] forge: 
FTBFS on multiple architectures
There is no source info for the package 'glm' at version '0.9.8.3-1' with 
architecture ''
Unable to make a source version for version '0.9.8.3-1'
Marked as found in versions 0.9.8.3-1.
> forcemerge 850277 850243
Bug #850277 {Done: Ghislain Antony Vaillant } [src:glm] 
src:glm: CMake detection fails on !x64
Unable to merge bugs because:
package of #850243 is 'glm' not 'src:glm'
Failed to forcibly merge 850277: Did not alter merged bugs.

>
End of message, stopping processing here.

Please contact me if you need assistance.
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850243: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=850243
850277: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=850277
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Processed (with 1 error): your mail

2017-02-05 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 850243 src:glm 0.9.8.3-1
Bug #850243 {Done: Ghislain Antony Vaillant } [glm] forge: 
FTBFS on multiple architectures
Bug reassigned from package 'glm' to 'src:glm'.
No longer marked as found in versions 0.9.8.3-1.
Ignoring request to alter fixed versions of bug #850243 to the same values 
previously set
Bug #850243 {Done: Ghislain Antony Vaillant } [src:glm] 
forge: FTBFS on multiple architectures
Marked as found in versions glm/0.9.8.3-1.
> forcemerge 850277 850243
Bug #850277 {Done: Ghislain Antony Vaillant } [src:glm] 
src:glm: CMake detection fails on !x64
Bug #850243 {Done: Ghislain Antony Vaillant } [src:glm] 
forge: FTBFS on multiple architectures
Severity set to 'important' from 'serious'
Failed to forcibly merge 850277: It is nonsensical for a bug to block itself 
(or a merged partner): 850243.

>
End of message, stopping processing here.

Please contact me if you need assistance.
-- 
850243: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=850243
850277: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=850277
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Bug#852514: marked as done (libpetsc3.7-dev: leaves alternatives after purge: /usr/lib/petscdir/{3.7, 3.7-real})

2017-02-05 Thread Debian Bug Tracking System
Your message dated Sun, 05 Feb 2017 22:03:36 +
with message-id 
and subject line Bug#852514: fixed in petsc 3.7.5+dfsg1-4
has caused the Debian Bug report #852514,
regarding libpetsc3.7-dev: leaves alternatives after purge: 
/usr/lib/petscdir/{3.7, 3.7-real}
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
852514: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=852514
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libpetsc3.7-dev
Version: 3.7.5+dfsg1-3
Severity: important
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package left unowned files on
the system after purge, which is a violation of policy 6.8:

https://www.debian.org/doc/debian-policy/ch-maintainerscripts.html#s-removedetails

The leftover files are actually alternatives that were installed by the
package but have not been properly removed.

This was observed after a stretch->sid upgrade, the packages in stretch
and sid itself work fine. Therefore I assume you obsoleted some
alternative in the sid package. To clean this up, you should unregister
the obsolete alternative in the postinst script.

>From the attached log (scroll to the bottom...):

2m18.4s INFO: Warning: Package purging left files on system:
  /etc/alternatives/petsc3.7 -> /usr/lib/petscdir/3.7.4/x86_64-linux-gnu-real   
 not owned
  /etc/alternatives/petsc3.7-real -> 
/usr/lib/petscdir/3.7.4/x86_64-linux-gnu-real   not owned
  /usr/lib/petscdir/ owned by: libpetsc3.7.5-dev:amd64, 
libpetsc3.7.4-dev:amd64
  /usr/lib/petscdir/3.7 -> /etc/alternatives/petsc3.7not owned
  /usr/lib/petscdir/3.7-real -> /etc/alternatives/petsc3.7-real  not owned


cheers,

Andreas


libpetsc3.7-dev_3.7.5+dfsg1-3.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: petsc
Source-Version: 3.7.5+dfsg1-4

We believe that the bug you reported is fixed in the latest version of
petsc, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 852...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Drew Parsons  (supplier of updated petsc package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Mon, 06 Feb 2017 05:03:51 +0800
Source: petsc
Binary: libpetsc3.7-dev libpetsc3.7.5-dev petsc-dev libpetsc3.7.5 
libpetsc3.7.5-dbg petsc3.7.5-doc libpetsc-complex-3.7-dev 
libpetsc-complex-3.7.5-dev libpetsc-complex-3.7.5 libpetsc-complex-3.7.5-dbg
Architecture: source
Version: 3.7.5+dfsg1-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Drew Parsons 
Description:
 libpetsc-complex-3.7-dev - Static libraries, shared links, header files for 
PETSc
 libpetsc-complex-3.7.5 - Shared libraries for version 3.7 of PETSc with 
Complex Numbers
 libpetsc-complex-3.7.5-dbg - Debugging libraries for PETSc
 libpetsc-complex-3.7.5-dev - Static libraries, shared links, header files for 
PETSc
 libpetsc3.7-dev - Static libraries, shared links, header files for PETSc
 libpetsc3.7.5 - Shared libraries for version 3.7 of PETSc
 libpetsc3.7.5-dbg - Debugging libraries for PETSc
 libpetsc3.7.5-dev - Static libraries, shared links, header files for PETSc
 petsc-dev  - Virtual package depending on latest PETSc development package
 petsc3.7.5-doc - Documentation and examples for PETSc
Closes: 852514
Changes:
 petsc (3.7.5+dfsg1-4) unstable; urgency=medium
 .
   * Don't duplicate -dev dependencies. -lhdf5 and -lsuperlu are
 invoked in PETSc.pc, so we Depend on their dev packages, we don't
 simply Recommend them.
   * Move petsc3.7 and petsc3.7-real alternatives handling from
 libpetsc3.7-dev to libpetsc3.7.5-dev. Similarly petsc3.7-complex.
 Otherwise alternatives for older patch versions are left unowned.
 Closes: #852514.
Checksums-Sha1:
 640c57a3e31f0c5738ab8155977b169c6143e225 3051 petsc_3.7.5+dfsg1-4.dsc
 759c01e0ec7799df7f4b9878966e4b4ecf7c75b1 36016 
petsc_3.7.5+dfsg1-4.debian.tar.xz
Checksums-Sha256:
 3f1f253f64a061954175cb7ff364d8c4b12edee20c7306ca2b600ed2c4b091c3 3051 
petsc_3.7.5+dfsg1-4.dsc
 9b53b1f3e7d5fc709e0dd7cb081be462d3053e91b8

Processed: found 827199 in 3.9.0~r4595-3

2017-02-06 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> # From: Tino Didriksen 
> # To: 827...@bugs.debian.org
> # Subject: Re: Bug#827199: hfst: FTBFS: twolc test fails on big-endian systems
> # Date: Wed, 15 Jun 2016 17:03:20 +0200
> # ...
> # While it did successfully build in the past, that was only because the test
> # suite was disabled until recently.
> # Therefore, this also affects the testing version, even if not in the form of
> # FTBFS, but rather of just "not working", probably.
> found 827199 3.9.0~r4595-3
Bug #827199 [src:hfst] hfst: FTBFS: twolc test fails on big-endian systems
Marked as found in versions hfst/3.9.0~r4595-3.
>
End of message, stopping processing here.

Please contact me if you need assistance.
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Processed: Fwd: Re: [linbox-team/givaro] test-crt (sometimes) fails (#38)

2017-02-06 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 fixed-upstream
Bug #852995 [src:givaro] givaro: FTBFS randomly (failing tests)
Added tag(s) fixed-upstream.

-- 
852995: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=852995
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Processed: retry

2017-02-06 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> forwarded 831540 https://github.com/Theano/Theano/issues/5498
Bug #831540 [src:theano] theano: assertion error in test_fit_int64 on i386 and 
hurd/kreebsd-i386
Changed Bug forwarded-to-address to 
'https://github.com/Theano/Theano/issues/5498' from 
'https://groups.google.com/forum/#!topic/theano-dev/y4e0ABnb_8o'.
> tags 831540 patch
Bug #831540 [src:theano] theano: assertion error in test_fit_int64 on i386 and 
hurd/kreebsd-i386
Added tag(s) patch.
> tags 848764 patch
Bug #848764 [src:theano] theano: test failures with Numpy 1.12
Added tag(s) patch.
>
End of message, stopping processing here.

Please contact me if you need assistance.
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831540: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831540
848764: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848764
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Bug#820797: marked as done (clhep: non-free file; incomplete copyright)

2017-02-07 Thread Debian Bug Tracking System
Your message dated Tue, 07 Feb 2017 11:33:39 +
with message-id 
and subject line Bug#820797: fixed in clhep 2.1.4.1+dfsg-1
has caused the Debian Bug report #820797,
regarding clhep: non-free file; incomplete copyright
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


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820797: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=820797
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Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: clhep
Version: 2.1.4.1-1.2
Severity: serious

File "GenericFunctions/doc/psfig.sty" is non-free:

  Permission is granted for use and non-profit distribution of psfig/tex
  providing that this notice is clearly maintained. The right to
  distribute any portion of psfig/tex for profit or as part of any commercial
  product is specifically reserved for the author(s) of that portion.

Also files: 

  

  Utility/Utility/memory.h  

  Utility/test/testCategories.cc

  Utility/test/testIsSame.cc

  Utility/test/testPrimaryTraits.cc 

  Utility/test/testSharedPtr.cc 

  Utility/test/testSharedPtrBasic.cc

  Utility/test/testSharedPtrConvertible.cc  

  Utility/test/testWeakPtr.cc   


are BSL-1.0 licensed yet this information is not mentioned in copyright file.

-- 
Regards,
 Dmitry Smirnov
 GPG key : 4096R/53968D1B


signature.asc
Description: This is a digitally signed message part.
--- End Message ---
--- Begin Message ---
Source: clhep
Source-Version: 2.1.4.1+dfsg-1

We believe that the bug you reported is fixed in the latest version of
clhep, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 820...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ole Streicher  (supplier of updated clhep package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 07 Feb 2017 12:01:31 +0100
Source: clhep
Binary: libclhep2.1v5 libclhep-dev clhep-doc
Architecture: source
Version: 2.1.4.1+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ole Streicher 
Description:
 clhep-doc  - Documentation of CLHEP
 libclhep-dev - CLHEP: A Class Library for High Energy Physics - development
 libclhep2.1v5 - CLHEP: A Class Library for High Energy Physics
Closes: 820797
Changes:
 clhep (2.1.4.1+dfsg-1) unstable; urgency=medium
 .
   [ Andreas Tille ]
   * Team upload
   * Replace psfig by graphicx
 Closes: #820797
   * DEP5 copyright to enable using Files-Excluded: */psfig.sty
Checksums-Sha1:
 b8f50aabd0472dd782a8d7c6d34bd82d5451de4a 2143 clhep_2.1.4.1+dfsg-1.dsc
 8cb5c800c13add4165bfd4048491993bb1b411b4 1860127 clhep_2.1.4.1+dfsg.orig.tar.gz
 426660d8fac8b90cffa4eb1b0e2f79dc9b2cd0c7 6496 
clhep_2.1.4.1+dfsg-1.debian.tar.xz
Checksums-Sha256:
 7b11dc76939c6580e0c0e34e562fb0656e03f695dcef5dc9a53b11cd9cc7b26d 2143 
clhep_2.1.4.1+dfsg-1.dsc
 5fa203ade32adda9b70b994569cfb8b7ebb8ba556826a79cd888288d3f7cf5d9 1860127 
clhep_2.1.4.1+dfsg.orig.tar.gz
 9e5b3dbf74219ed50797952f6ae1a9c363d67804e62c13e07826c31d6a992884 6496 
clhep_2.1.

Bug#748130: marked as done (on wheezy/amd64: libscotch-5.1 depends on mpich while mpi-default is openmpi)

2017-02-07 Thread Debian Bug Tracking System
Your message dated Wed, 08 Feb 2017 07:03:16 +0800
with message-id <1486508596.20064.53.ca...@debian.org>
and subject line Re: on wheezy/amd64: libscotch-5.1 depends on mpich while 
mpi-default is openmpi
has caused the Debian Bug report #748130,
regarding on wheezy/amd64: libscotch-5.1 depends on mpich while mpi-default is 
openmpi
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


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Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libscotch-5.1
Version: 5.1.12b.dfsg-2+b1
Severity: serious

Hi all,

The stable (wheezy) debian package "libscotch-5.1" depends on MPI lib as :

  dep: libmpich2-3   [amd64, mips, mipsel, s390, s390x]
  dep: libopenmpi1.3 [not amd64, mips, mipsel, s390, s390x]

while the "mpi-default-bin" package has the following dependencies :

  dep: mpich2   [mips, mipsel, s390, s390x]
  dep: openmpi-bin  [not mips, mipsel, s390, s390x]

The same bug occurs for all MPI-dependent packages from the "scotch" source 
package.
Thus, on amd64, the scotch library is not usable:
package depending on scotch will compile but segfault at run time.

A possible solution should be to recompile the wheezy/amd64 scotch package.

-- System Information:
Debian Release: wheezy
  APT prefers stable
  APT policy: (500, 'stable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 3.2.0-4-amd64 (SMP w/6 CPU cores)
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages libscotch-5.1 depends on:
ii  libc6  2.13-38+deb7u1
ii  libcr0 0.8.5-2
ii  libmpich2-31.4.1-4.2
ii  zlib1g 1:1.2.7.dfsg-13

libscotch-5.1 recommends no packages.
libscotch-5.1 suggests no packages.
-- no debconf information

Yours sincerely,

Pierre Saramito
-- 
pierre.saram...@imag.fr
Directeur de Recherche CNRS
Laboratoire Jean Kuntzmann, Grenoble, France
http://www-ljk.imag.fr/membres/Pierre.Saramito
--- End Message ---
--- Begin Message ---
On Wed, 14 May 2014 17:42:48 +0200 Pierre Saramito  wrote:
> 
> The stable (wheezy) debian package "libscotch-5.1" depends on MPI lib
as :
> 
>   dep: libmpich2-3   [amd64, mips, mipsel, s390, s390x]
>   dep: libopenmpi1.3 [not amd64, mips, mipsel, s390, s390x]
> 
> while the "mpi-default-bin" package has the following dependencies :
> 
>   dep: mpich2   [mips, mipsel, s390, s390x]
>   dep: openmpi-bin  [not mips, mipsel, s390, s390x]
> 
... 
> A possible solution should be to recompile the wheezy/amd64 scotch
package.


The current version of scotch (5.1.12b.dfsg-2) in unstable and testing
depends on libopenmpi2 with mpi-default-dev.

So this bug can be closed now.

Drew--- End Message ---
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Processed: user debian...@lists.debian.org, usertagging 837915, affects 837915, usertagging 710257 ...

2017-02-07 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> user debian...@lists.debian.org
Setting user to debian...@lists.debian.org (was a...@debian.org).
> usertags 837915 piuparts
There were no usertags set.
Usertags are now: piuparts.
> affects 837915 + code-aster-mpi-engine
Bug #837915 [src:aster] aster: FTBFS due to install failures
Added indication that 837915 affects code-aster-mpi-engine
> usertags 710257 piuparts
There were no usertags set.
Usertags are now: piuparts.
> tags 854512 + sid stretch
Bug #854512 [src:ftpcopy] ftpcopy: FTBFS: dpkg-shlibdeps: error: cannot read 
«BUILDDIR»/debian/ftpcopy/usr/bin/ftpcp
Added tag(s) stretch and sid.
> found 846441 1:1.1-3
Bug #846441 {Done: Ralf Treinen } [src:mccs] mccs: add 
libfl-dev to Build-Depends
Marked as found in versions mccs/1:1.1-3.
> tags 846441 + sid stretch
Bug #846441 {Done: Ralf Treinen } [src:mccs] mccs: add 
libfl-dev to Build-Depends
Added tag(s) sid and stretch.
> thanks
Stopping processing here.

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Bug#848701: marked as done (statsmodels: FTBFS on i386)

2017-02-08 Thread Debian Bug Tracking System
Your message dated Wed, 8 Feb 2017 13:15:27 -0500
with message-id <20170208181527.wluojw3rcqys3...@hopa.kiewit.dartmouth.edu>
and subject line was fixed
has caused the Debian Bug report #848701,
regarding statsmodels: FTBFS on i386
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


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--- Begin Message ---
Source: statsmodels
Version: 0.8.0~rc1+git59-gef47cd9-1

Hi,

your package statsmodels currently FTBFS on i386 and as such does
not migrate to testing.

Build logs from the buildds can be found here:
https://buildd.debian.org/status/logs.php?arch=i386&pkg=statsmodels&ver=0.8.0%7Erc1%2Bgit59-gef47cd9-1

I also note that your package is due to be removed from testing
today, and the freeze is approaching rather quickly.

-- 
christian hofstaedtler 
--- End Message ---
--- Begin Message ---
Version: 0.8.0~rc1+git59-gef47cd9-3 

as https://buildd.debian.org/status/logs.php?pkg=statsmodels&arch=i386
shows it built fine on i386 thanks to Ole:

statsmodels (0.8.0~rc1+git59-gef47cd9-3) unstable; urgency=medium

  * Work around a Pandas readttable bug to fix (temporary) FTBFS on i386

 -- Ole Streicher   Mon, 26 Dec 2016 11:46:23 +0100


-- 
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Phone: +1 (603) 646-9834   Fax: +1 (603) 646-1419
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Processed: forwarded upstream

2017-02-08 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> forwarded 853416 https://gna.org/bugs/index.php?25501
Bug #853416 [src:getfem++] getfem++: ftbfs with GCC-7
Set Bug forwarded-to-address to 'https://gna.org/bugs/index.php?25501'.
>
End of message, stopping processing here.

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Processed: Blocked by #854692

2017-02-09 Thread Debian Bug Tracking System
Processing control commands:

> block -1 by 854692
Bug #854502 [pybind11-dev] pybind11-dev: cmake configuration scripts are not 
installed
854502 was not blocked by any bugs.
854502 was not blocking any bugs.
Added blocking bug(s) of 854502: 854692

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Processed: Fwd: Re: [linbox-team/fflas-ffpack] Fails to build with gcc 7 (#74)

2017-02-10 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 fixed-upstream
Bug #853399 [src:fflas-ffpack] fflas-ffpack: ftbfs with GCC-7
Added tag(s) fixed-upstream.

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Processed: forwarded upstream

2017-02-10 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> forwarded 848859 https://gna.org/bugs/index.php?25503
Bug #848859 [src:getfem++] getfem++: FTBFS randomly (failing tests)
Set Bug forwarded-to-address to 'https://gna.org/bugs/index.php?25503'.
>
End of message, stopping processing here.

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Processed: your mail

2017-02-11 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> fixed 853124 3.0.0+dfsg-1~exp1
Bug #853124 {Done: Julian Andres Klode } [src:opencv] opencv: 
Add Breaks to old packages to assist in upgrades
Marked as fixed in versions opencv/3.0.0+dfsg-1~exp1.
> --
Stopping processing here.

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Processed: your mail

2017-02-11 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 844067 libopencv-dev
Bug #844067 [src:opencv] opencv: Uninstallable package libopencv-dev after 
binNMU
Bug reassigned from package 'src:opencv' to 'libopencv-dev'.
No longer marked as found in versions opencv/3.1.0+dfsg-1~exp2.
Ignoring request to alter fixed versions of bug #844067 to the same values 
previously set
> forcemerge 849476 844067
Bug #849476 [libopencv-dev] libopencv-dev: fails to install on experimental due 
to inconsistent version suffix '+b1'
Bug #844067 [libopencv-dev] opencv: Uninstallable package libopencv-dev after 
binNMU
Severity set to 'serious' from 'important'
Marked as found in versions opencv/3.1.0+dfsg-1~exp2.
Merged 844067 849476
> # closing this - let's keep the discussion in the newer 675542
> close 525023
Bug #525023 [libcv-dev] libcv-dev: circular dependency with libcvaux-dev and 
libhighgui-dev
Marked Bug as done
> found 818739 3.0.0+dfsg-1~exp1
Bug #818739 [src:opencv] opencv: Please package opencv 3.1
Marked as found in versions opencv/3.0.0+dfsg-1~exp1.
> notfound 818739 3.0
Bug #818739 [src:opencv] opencv: Please package opencv 3.1
The source 'opencv' and version '3.0' do not appear to match any binary packages
No longer marked as found in versions opencv/3.0.
> --
Stopping processing here.

Please contact me if you need assistance.
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Bug#818739: marked as done (opencv: Please package opencv 3.1)

2017-02-11 Thread Debian Bug Tracking System
Your message dated Sat, 11 Feb 2017 10:16:56 +0100
with message-id <20170211091652.ifjbxwltyn4dh...@mapreri.org>
and subject line Re: Bug#818739: opencv: Please package opencv 3.1
has caused the Debian Bug report #818739,
regarding opencv: Please package opencv 3.1
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


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--- Begin Message ---
Source: opencv
Version: 3.0
Severity: wishlist

Its now out and working (tried manaul compil and use it compiling digikam 5)

-- System Information:
Debian Release: stretch/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.4.5 (SMP w/8 CPU cores; PREEMPT)
Locale: LANG=fr_FR.UTF8, LC_CTYPE=fr_FR.UTF8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
--- End Message ---
--- Begin Message ---
Version: 3.1.0+dfsg-1~exp0

On Sun, Mar 20, 2016 at 11:07:44AM +0100, Eric Valette wrote:
> Source: opencv
> Version: 3.0
> Severity: wishlist
> 
> Its now out and working (tried manaul compil and use it compiling digikam 5)


In experimental for a while.

-- 
regards,
Mattia Rizzolo

GPG Key: 66AE 2B4A FCCF 3F52 DA18  4D18 4B04 3FCD B944 4540  .''`.
more about me:  https://mapreri.org : :'  :
Launchpad user: https://launchpad.net/~mapreri  `. `'`
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Processed: No longer blocked by #854692

2017-02-11 Thread Debian Bug Tracking System
Processing control commands:

> unblock -1 by 854692
Bug #854502 [pybind11-dev] pybind11-dev: cmake configuration scripts are not 
installed
854502 was blocked by: 854692
854502 was not blocking any bugs.
Removed blocking bug(s) of 854502: 854692

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Processed: tagging 854905

2017-02-11 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 854905 + sid
Bug #854905 [libpetsc3.7.5-dev] libpetsc3.7.5-dev: Package uninstallable: 
libopenmpi-dev dependency unsatisfiable
Added tag(s) sid.
> thanks
Stopping processing here.

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Processed: nmu: petsc_3.7.5+dfsg1-4

2017-02-11 Thread Debian Bug Tracking System
Processing control commands:

> reassign -1 release.debian.org
Bug #854905 [libpetsc3.7.5-dev] libpetsc3.7.5-dev: Package uninstallable: 
libopenmpi-dev dependency unsatisfiable
Bug reassigned from package 'libpetsc3.7.5-dev' to 'release.debian.org'.
Ignoring request to alter found versions of bug #854905 to the same values 
previously set
Ignoring request to alter fixed versions of bug #854905 to the same values 
previously set
> retitle -1 nmu: petsc_3.7.5+dfsg1-4
Bug #854905 [release.debian.org] libpetsc3.7.5-dev: Package uninstallable: 
libopenmpi-dev dependency unsatisfiable
Changed Bug title to 'nmu: petsc_3.7.5+dfsg1-4' from 'libpetsc3.7.5-dev: 
Package uninstallable: libopenmpi-dev dependency unsatisfiable'.
> severity -1 normal
Bug #854905 [release.debian.org] nmu: petsc_3.7.5+dfsg1-4
Severity set to 'normal' from 'grave'
> tags -1 - sid
Bug #854905 [release.debian.org] nmu: petsc_3.7.5+dfsg1-4
Removed tag(s) sid.
> affects -1 libpetsc3.7.5-dev
Bug #854905 [release.debian.org] nmu: petsc_3.7.5+dfsg1-4
Added indication that 854905 affects libpetsc3.7.5-dev

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Processed: Bug#818739: not yet resolved by any complete Debian suite (Re: Bug#818739: opencv: Please package opencv 3.1)

2017-02-12 Thread Debian Bug Tracking System
Processing control commands:

> reopen -1
Bug #818739 {Done: Mattia Rizzolo } [src:opencv] opencv: 
Please package opencv 3.1
'reopen' may be inappropriate when a bug has been closed with a version;
all fixed versions will be cleared, and you may need to re-add them.
Bug reopened
No longer marked as fixed in versions 3.1.0+dfsg-1~exp0.
> tags -1 + fixed-in-experimental
Bug #818739 [src:opencv] opencv: Please package opencv 3.1
Added tag(s) fixed-in-experimental.

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Processed: Bug#818739: opencv: Please package opencv 3.1

2017-02-12 Thread Debian Bug Tracking System
Processing control commands:

> fixed -1 opencv/3.1.0+dfsg-1~exp0
Bug #818739 [src:opencv] opencv: Please package opencv 3.1
Marked as fixed in versions opencv/3.1.0+dfsg-1~exp0.

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Bug#848764: marked as done (theano: test failures with Numpy 1.12)

2017-02-13 Thread Debian Bug Tracking System
Your message dated Mon, 13 Feb 2017 17:48:36 +
with message-id 
and subject line Bug#848764: fixed in theano 0.8.2-4
has caused the Debian Bug report #848764,
regarding theano: test failures with Numpy 1.12
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
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--- Begin Message ---
Source: theano
Version: 0.8.2-3
Severity: serious
Tags: stretch sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20161219 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part (hopefully):
> self.with_linker(gof.PerformLinker(), scalar.and_, dtype=dtype)
>   File "/<>/theano/tensor/tests/test_elemwise.py", line 455, in 
> with_linker
> (f_xv, zv, xsh, tosum))
> AssertionError: (array(1, dtype=int8), array(-1, dtype=int8), (5, 0), [0, 1])
> 
> --
> Ran 2995 tests in 5904.778s
> 
> FAILED (SKIP=113, errors=3, failures=2)
> 0.0581646137166
> 0.0581646137166
> 0.0581646137166
> 0.0581646137166
> E: pybuild pybuild:276: test: plugin custom failed with: exit code=1: 
> PYTHONPATH=. python2.7 bin/theano-nose -v
> dh_auto_test: pybuild --test --test-nose -i python{version} -p 2.7 returned 
> exit code 13
> debian/rules:23: recipe for target 'override_dh_auto_test' failed

The full build log is available from:
   http://aws-logs.debian.net/2016/12/19/theano_0.8.2-3_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Source: theano
Source-Version: 0.8.2-4

We believe that the bug you reported is fixed in the latest version of
theano, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 848...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Daniel Stender  (supplier of updated theano package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Mon, 13 Feb 2017 15:04:06 +0100
Source: theano
Binary: python-theano python3-theano theano-doc
Architecture: source amd64 all
Version: 0.8.2-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Daniel Stender 
Description:
 python-theano - CPU/GPU math expression compiler for Python
 python3-theano - CPU/GPU math expression compiler for Python 3
 theano-doc - CPU/GPU math expression compiler for Python (docs)
Closes: 848764
Changes:
 theano (0.8.2-4) unstable; urgency=medium
 .
   * add fixes-for-numpy-1.12.patch (Closes: #848764) [thanks to
 Rebecca N. Palmer].
Checksums-Sha1:
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Checksums-Sha256:
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theano_0.8.2-4.dsc
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theano_0.8.2-4.debian.tar.xz
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python-theano_0.8.2-4_amd64.deb
 d0e95f63862ff4174c369b2cc41286407266fc5cb4ae15d844b3e6ed584760b6 1951828 
python3-theano_0.8.2-4_amd64.deb
 f461d58fec05

Processed: theano: FTBFS on amd64 (fail of test_csr_correct_output_faster_than_scipy)

2017-02-13 Thread Debian Bug Tracking System
Processing control commands:

> severity -1 serious
Bug #835531 [src:theano] theano: FTBFS on amd64 (fail of 
test_csr_correct_output_faster_than_scipy)
Severity set to 'serious' from 'important'

-- 
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Processed: retitle 835531

2017-02-13 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> retitle 835531 theano: fail of test_csr_correct_output_faster_than_scipy at 
> times (FTBFS)
Bug #835531 [src:theano] theano: FTBFS on amd64 (fail of 
test_csr_correct_output_faster_than_scipy)
Changed Bug title to 'theano: fail of test_csr_correct_output_faster_than_scipy 
at times (FTBFS)' from 'theano: FTBFS on amd64 (fail of 
test_csr_correct_output_faster_than_scipy)'.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Bug#831540: marked as done (theano: assertion error in test_fit_int64 on i386 and hurd/kreebsd-i386)

2017-02-13 Thread Debian Bug Tracking System
Your message dated Mon, 13 Feb 2017 23:49:36 +
with message-id 
and subject line Bug#831540: fixed in theano 0.8.2-5~exp1
has caused the Debian Bug report #831540,
regarding theano: assertion error in test_fit_int64 on i386 and 
hurd/kreebsd-i386
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
831540: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831540
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: theano
Version: 0.8.2-2
Severity: normal

There is a single assertion error in the tests running on Python 3.5 on i386 
[1]:


FAIL: test_fit_int64 (theano.tensor.tests.test_basic.T_long_tensor)
--
Traceback (most recent call last):
  File "/«PKGBUILDDIR»/theano/tensor/tests/test_basic.py", line 6675, in 
test_fit_int64
assert vector_ct.dtype == 'int64'
AssertionError

--
Ran 2995 tests in 6746.401s


The same single error occurs on kfreebsd-i386 [2], and hurd-i386 [3].

This is a regression from 0.8.2-2 (0.8.2-1 was build with `FAST_COMPILE`).
dh_auto_tests is temporarily failsafed, this is going to be removed when this
problem is solved.

Thanks,
DS

[1] 
https://buildd.debian.org/status/fetch.php?pkg=theano&arch=i386&ver=0.8.2-2&stamp=1468619301

[2] 
https://buildd.debian.org/status/fetch.php?pkg=theano&arch=kfreebsd-i386&ver=0.8.2-2&stamp=1468626553

[3] 
https://buildd.debian.org/status/fetch.php?pkg=theano&arch=hurd-i386&ver=0.8.2-2&stamp=1468689994

-- System Information:
Debian Release: stretch/sid
  APT prefers testing
  APT policy: (500, 'testing'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.5.0-2-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
--- End Message ---
--- Begin Message ---
Source: theano
Source-Version: 0.8.2-5~exp1

We believe that the bug you reported is fixed in the latest version of
theano, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 831...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Daniel Stender  (supplier of updated theano package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Mon, 13 Feb 2017 23:53:19 +0100
Source: theano
Binary: python-theano python3-theano theano-doc
Architecture: source amd64 all
Version: 0.8.2-5~exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Daniel Stender 
Description:
 python-theano - CPU/GPU math expression compiler for Python
 python3-theano - CPU/GPU math expression compiler for Python 3
 theano-doc - CPU/GPU math expression compiler for Python (docs)
Closes: 831540
Changes:
 theano (0.8.2-5~exp1) experimental; urgency=medium
 .
   * add fix-test_fit_int64-for-python3-32bit.patch (Closes: #831540)
 [thanks to Rebecca N. Palmer].
   * deb/rules: remove test failsafes completely.
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python3-theano_0.8.2-5~exp1_amd64.deb
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theano-doc_0.8.2-5~exp1_all.deb
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theano_0.8.2-5~exp1_amd64.buildinfo
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python-theano_0.8.2-5~exp1_amd64.deb
 8d88282f8a7d91c47d4df7786fe2b41c594

Processed: theano: SamplingDot broken on negative-stride arrays

2017-02-13 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 upstream
Bug #855102 [theano] theano: SamplingDot broken on negative-stride arrays
Added tag(s) upstream.

-- 
855102: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855102
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Processed: 855130 found in release 3.0.6-10.1

2017-02-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> found 855130 3.0.6-10.1
Bug #855130 [src:med-fichier] med-fichier: MED library is not compatible with 
HDF5 1.10
Marked as found in versions med-fichier/3.0.6-10.1.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
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Processed: Re: saga: ftbfs with GCC-7

2017-02-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 853650 src:libvigraimpex
Bug #853650 [src:saga] saga: ftbfs with GCC-7
Bug reassigned from package 'src:saga' to 'src:libvigraimpex'.
No longer marked as found in versions saga/2.3.1+dfsg-3.
Ignoring request to alter fixed versions of bug #853650 to the same values 
previously set
> affects 853650 src:saga
Bug #853650 [src:libvigraimpex] saga: ftbfs with GCC-7
Added indication that 853650 affects src:saga
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
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Processed: Re: Processed (with 1 error):

2017-02-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 855102 patch
Bug #855102 [theano] theano: SamplingDot broken on negative-stride arrays
Added tag(s) patch.
> tags 831541 patch
Bug #831541 [src:theano] theano: single GradientError and WrongValues in tests 
on s390x, ppc64 and sparc
Added tag(s) patch.
> tags 835531 patch
Bug #835531 [src:theano] theano: fail of 
test_csr_correct_output_faster_than_scipy at times (FTBFS)
Added tag(s) patch.
>
End of message, stopping processing here.

Please contact me if you need assistance.
-- 
831541: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831541
835531: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=835531
855102: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855102
Debian Bug Tracking System
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Processed: severity 835531

2017-02-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> severity 835531 important
Bug #835531 [src:theano] theano: fail of 
test_csr_correct_output_faster_than_scipy at times (FTBFS)
Severity set to 'important' from 'serious'
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
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Bug#831541: marked as done (theano: single GradientError and WrongValues in tests on s390x, ppc64 and sparc)

2017-02-14 Thread Debian Bug Tracking System
Your message dated Tue, 14 Feb 2017 23:34:06 +
with message-id 
and subject line Bug#831541: fixed in theano 0.8.2-6~exp1
has caused the Debian Bug report #831541,
regarding theano: single GradientError and WrongValues in tests on s390x, ppc64 
and sparc
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
831541: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831541
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: theano
Version: 0.8.2-2
Severity: normal

The tests on s390x came up with three single errors (shortened) [1]:


ERROR: test_grad (theano.sparse.tests.test_basic.SamplingDotTester)
--
GradientError: GradientError: numeric gradient and analytic gradient exceed 
tolerance:
At position 0 of argument 0,
abs. error = 4.801748,  abs. tolerance = 0.000100
rel. error = 1.00,  rel. tolerance = 0.000100
Exception args: 
The error happened with the following inputs:, [array([[ 4.,  2.,  2.],
   [ 0.,  1.,  3.],
   [ 1.,  0.,  0.],



ERROR: test_op (theano.sparse.tests.test_basic.SamplingDotTester)
--
WrongValue: WrongValue
   : shape, dtype, strides, min, max, n_inf, n_nan:
  Expected : (4, 5) float64 (40, 8) 0.0 28.0 0 0 
  Value: (4, 5) float64 (40, 8) 0.0 0.0 0 0 
  expected: [[ 28.   0.   0.   0.   0.]
 [ 12.   9.  11.   0.   0.]
 [  4.   1.   0.   2.   0.]
 [  0.   8.   0.   0.   0.]]



ERROR: test (theano.sparse.tests.test_basic.UsmmTests)
--
Traceback (most recent call last):
  File "/«PKGBUILDDIR»/theano/sparse/tests/test_basic.py", line 1458, in test
utt.assert_allclose(f_a_out, f_b_out, rtol=rtol, atol=atol)
  File "/«PKGBUILDDIR»/theano/tests/unittest_tools.py", line 339, in 
assert_allclose
raise WrongValue(val1, val2, rtol, atol)
WrongValue: WrongValue
   : shape, dtype, strides, min, max, n_inf, n_nan:
  Expected : (10, 200) float32 (800, 4) -0.999263 0.999721 0 0 
  Value: (10, 200) float32 (800, 4) -20.3578 20.3085 0 0 
  expected: [[ 0.43297213 -0.99617213 -0.94651264 ...,  0.90926737  
0.87269104
   0.18024164]


The same errors occurs on ppc64 [2].

This is a regression from 0.8.2-2 (0.8.2-1 was build with `FAST_COMPILE` and 
this didn't
came up then). dh_auto_test is temporarily failsafed, this is going to be 
removed when
this problem is solved.

Thanks,
DS

[1] 
https://buildd.debian.org/status/fetch.php?pkg=theano&arch=s390x&ver=0.8.2-2&stamp=1468619676

[2] 
https://buildd.debian.org/status/fetch.php?pkg=theano&arch=ppc64&ver=0.8.2-3&stamp=1468725341

-- System Information:
Debian Release: stretch/sid
  APT prefers testing
  APT policy: (500, 'testing'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.5.0-2-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
--- End Message ---
--- Begin Message ---
Source: theano
Source-Version: 0.8.2-6~exp1

We believe that the bug you reported is fixed in the latest version of
theano, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 831...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Daniel Stender  (supplier of updated theano package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 15 Feb 2017 00:08:13 +0100
Source: theano
Binary: python-theano python3-theano theano-doc
Architecture: source amd64 all
Version: 0.8.2-6~exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Daniel Stender 
Description:
 python-theano - CPU/GPU math expression compiler for Python
 python3-theano - CPU/GPU math expression compiler for Python 3
 theano-doc - CPU/GPU math expression compiler for Python (docs)
Closes: 831541 835531 855102
Changes:
 theano (0.8.2-6~exp1) experimental; urgency=medium
 .
   * add disable-ov

Bug#835531: marked as done (theano: fail of test_csr_correct_output_faster_than_scipy at times (FTBFS))

2017-02-14 Thread Debian Bug Tracking System
Your message dated Tue, 14 Feb 2017 23:34:06 +
with message-id 
and subject line Bug#835531: fixed in theano 0.8.2-6~exp1
has caused the Debian Bug report #835531,
regarding theano: fail of test_csr_correct_output_faster_than_scipy at times 
(FTBFS)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
835531: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=835531
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: theano
Version: 0.8.2-3
Severity: serious
Justification: fails to build from source (but built successfully in the past)

Current theano now fails also on amd64:


FAIL: test_csr_correct_output_faster_than_scipy 
(theano.sparse.tests.test_basic.test_structureddot)
--
Traceback (most recent call last):
  File "/build-1st/theano-0.8.2/theano/sparse/tests/test_basic.py", line 1218, 
in test_csr_correct_output_faster_than_scipy
scipy_time, overhead_rtol, overhead_tol))
AssertionError: (0.016754150390625, 0.015386821746826172, 0.012169837951660156, 
1.1, 0.002)

--
Ran 2995 tests in 17686.047s

FAILED (SKIP=113, failures=1)


DS

-- System Information:
Debian Release: stretch/sid
  APT prefers testing
  APT policy: (500, 'testing'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.5.0-2-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
--- End Message ---
--- Begin Message ---
Source: theano
Source-Version: 0.8.2-6~exp1

We believe that the bug you reported is fixed in the latest version of
theano, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 835...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Daniel Stender  (supplier of updated theano package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 15 Feb 2017 00:08:13 +0100
Source: theano
Binary: python-theano python3-theano theano-doc
Architecture: source amd64 all
Version: 0.8.2-6~exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Daniel Stender 
Description:
 python-theano - CPU/GPU math expression compiler for Python
 python3-theano - CPU/GPU math expression compiler for Python 3
 theano-doc - CPU/GPU math expression compiler for Python (docs)
Closes: 831541 835531 855102
Changes:
 theano (0.8.2-6~exp1) experimental; urgency=medium
 .
   * add disable-overly-environment-dependent-test.patch (Closes: #835531).
   * add fix-invalid-casts-negative-stride-handling.patch
 (Closes: #831541,#855102) [thanks again to Rebecca N. Palmer].
Checksums-Sha1:
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theano_0.8.2-6~exp1_amd64.buildinfo
Files:
 452c973913ba400

Bug#855102: marked as done (theano: SamplingDot broken on negative-stride arrays)

2017-02-14 Thread Debian Bug Tracking System
Your message dated Tue, 14 Feb 2017 23:34:06 +
with message-id 
and subject line Bug#855102: fixed in theano 0.8.2-6~exp1
has caused the Debian Bug report #855102,
regarding theano: SamplingDot broken on negative-stride arrays
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
855102: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855102
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---

Package: theano
Version: 0.8.2-3
Severity: important
Control: tags -1 upstream

Because Numpy arrays' data pointer is the first element in *index* order 
but BLAS expects the first element in *memory* order, simply calling a 
BLAS function as in SamplingDotCSR 
(https://sources.debian.net/src/theano/0.8.2-4/theano/sparse/opt.py/#L1902) 
doesn't work on negative-stride arrays:


import theano
import theano.sparse
import theano.tensor
import numpy as np
import scipy.sparse
x=[theano.tensor.matrix(),theano.tensor.matrix(),theano.sparse.csr_matrix()]
f=theano.function(x,theano.sparse.sampling_dot(*x))
m1=np.random.rand(3,5)
m2=np.random.rand(8,5)
m3=m2[::-1,::-1]#negative strides
p=scipy.sparse.csr_matrix(np.zeros((3,8)))
p[1,2]=1
print(f(m1,m2,p)[1,2],np.dot(m1,m2.T)[1,2])#equal
print(f(m1,m3,p)[1,2],np.dot(m1,m3.T)[1,2],f(m1,np.array(m3),p)[1,2])#should 
be equal, but aren't


I expect to post a fix tonight (mostly a copy from UsmmCscDense, plus 
c_code_cache_version bump).
--- End Message ---
--- Begin Message ---
Source: theano
Source-Version: 0.8.2-6~exp1

We believe that the bug you reported is fixed in the latest version of
theano, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 855...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Daniel Stender  (supplier of updated theano package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 15 Feb 2017 00:08:13 +0100
Source: theano
Binary: python-theano python3-theano theano-doc
Architecture: source amd64 all
Version: 0.8.2-6~exp1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Daniel Stender 
Description:
 python-theano - CPU/GPU math expression compiler for Python
 python3-theano - CPU/GPU math expression compiler for Python 3
 theano-doc - CPU/GPU math expression compiler for Python (docs)
Closes: 831541 835531 855102
Changes:
 theano (0.8.2-6~exp1) experimental; urgency=medium
 .
   * add disable-overly-environment-dependent-test.patch (Closes: #835531).
   * add fix-invalid-casts-negative-stride-handling.patch
 (Closes: #831541,#855102) [thanks again to Rebecca N. Palmer].
Checksums-Sha1:
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theano-doc_0.8.2-6~exp1_all.deb
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Checksums-Sha256:
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python3-theano_0.8.2-6~exp1_amd64.deb
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theano-doc_0.8.2-6~exp1_all.deb
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theano_0.8.2-6~exp1_amd64.buildinfo
Files:
 452c973913ba40026fe76cc9e40ccf8e 2711 science optional theano_0.8.2-6~exp1.dsc
 157870e0bd8f71b4f751f9c1416f5ad5 5440296 science optional 
theano_0.8.2.orig.tar.xz
 433b9615edb396cb2b673848

Processed: 855130 notfound in release 3.0.6-11

2017-02-14 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> notfound 855130 3.0.6-11
Bug #855130 [src:med-fichier] med-fichier: MED library is not compatible with 
HDF5 1.10
The source 'med-fichier' and version '3.0.6-11' do not appear to match any 
binary packages
No longer marked as found in versions med-fichier/3.0.6-11.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
855130: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855130
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Processed: Re: med-fichier: MED library is not compatible with HDF5 1.10

2017-02-15 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 + patch
Bug #855130 [src:med-fichier] med-fichier: MED library is not compatible with 
HDF5 1.10
Added tag(s) patch.

-- 
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Processed: Re: Bug#855204: libpetsc3.7.5-dev: uninstallable - Depends: libopenmpi-dev (< 2.0.2~git.20161226)

2017-02-15 Thread Debian Bug Tracking System
Processing control commands:

> reassign -1 release.debian.org
Bug #855204 [libpetsc3.7.5-dev] libpetsc3.7.5-dev: uninstallable - Depends: 
libopenmpi-dev (< 2.0.2~git.20161226)
Bug reassigned from package 'libpetsc3.7.5-dev' to 'release.debian.org'.
No longer marked as found in versions petsc/3.7.5+dfsg1-3.
Ignoring request to alter fixed versions of bug #855204 to the same values 
previously set
> forcemerge 854905 -1
Bug #854905 [release.debian.org] nmu: petsc_3.7.5+dfsg1-4
Bug #854905 [release.debian.org] nmu: petsc_3.7.5+dfsg1-4
Added tag(s) stretch and sid.
Bug #855204 [release.debian.org] libpetsc3.7.5-dev: uninstallable - Depends: 
libopenmpi-dev (< 2.0.2~git.20161226)
Severity set to 'normal' from 'serious'
Added indication that 855204 affects libpetsc3.7.5-dev
Merged 854905 855204

-- 
854905: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=854905
855204: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855204
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Processed: Re: Bug#855130: med-fichier: MED library is not compatible with HDF5 1.10

2017-02-15 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 - patch
Bug #855130 [src:med-fichier] med-fichier: MED library is not compatible with 
HDF5 1.10
Removed tag(s) patch.

-- 
855130: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855130
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Bug#855076: marked as done (giac: FTBFS: .../giac-doc/...: No such file or directory)

2017-02-15 Thread Debian Bug Tracking System
Your message dated Wed, 15 Feb 2017 19:34:12 +
with message-id 
and subject line Bug#855076: fixed in giac 1.2.3.25+dfsg1-2
has caused the Debian Bug report #855076,
regarding giac: FTBFS: .../giac-doc/...: No such file or directory
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
855076: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855076
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: giac
Version: 1.2.3.25+dfsg1-1
Severity: serious
Justification: fails to build from source (but built successfully in the past)

Builds of giac covering only its architecture-dependent binary
packages have been failing:

  find debian/giac-doc/usr/share/giac/examples/ \
\( -name '*.cas' -o -name '*.xws' -o -name '*.cxx' \) -exec chmod -x '{}' \;
  find: 'debian/giac-doc/usr/share/giac/examples/': No such file or directory
  debian/rules:26: recipe for target 'override_dh_fixperms' failed
  make[1]: *** [override_dh_fixperms] Error 1
  make[1]: Leaving directory '/«BUILDDIR»/giac-1.2.3.25+dfsg1'
  debian/rules:7: recipe for target 'binary-arch' failed
  make: *** [binary-arch] Error 2

(On some architectures, the build fails earlier, due to unrelated
issues I'll report separately.)

Please conditionalize the debian/rules commands that work with
giac-doc appropriately, for instance by renaming override_dh_fixperms
to override_dh_fixperms-indep.

Thanks!

FTR, even though giac is new to Debian, I'm classifying this bug as a
regression because it would affect potential binNMUs.

-- 
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
--- End Message ---
--- Begin Message ---
Source: giac
Source-Version: 1.2.3.25+dfsg1-2

We believe that the bug you reported is fixed in the latest version of
giac, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 855...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ximin Luo  (supplier of updated giac package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 15 Feb 2017 20:15:55 +0100
Source: giac
Binary: libgiac0 libgiac-dev xcas giac-doc
Architecture: source
Version: 1.2.3.25+dfsg1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ximin Luo 
Description:
 giac-doc   - Computer Algebra System - documentation
 libgiac-dev - Computer Algebra System C++ library - Development files
 libgiac0   - Computer Algebra System C++ library
 xcas   - Computer Algebra System - console and graphical calculator
Closes: 855076
Changes:
 giac (1.2.3.25+dfsg1-2) unstable; urgency=medium
 .
   * Fix arch-dep builds. (Closes: #855076)
Checksums-Sha1:
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giac_1.2.3.25+dfsg1-2.debian.tar.xz
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Checksums-Sha256:
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giac_1.2.3.25+dfsg1-2_source.buildinfo
Files:
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 2a652c7b29e2acf7eb6abdde441259c1 267660 science extra 
giac_1.2.3.25+dfsg1-2.debian.tar.xz
 775c9b90cddc46d55f0e1d651d780f36 10350 science extra 
giac_1.2.3.25+dfsg1-2_source.buildinfo

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Processed: openmpi / petsc / deal.ii

2017-02-16 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> block 855328 by 854905
Bug #855328 [release.debian.org] nmu: deal.ii_8.4.2-2
855328 was not blocked by any bugs.
855328 was not blocking any bugs.
Added blocking bug(s) of 855328: 855204 and 854905
> block 849764 by 855328
Bug #849764 [libdeal.ii-dev] libdeal.ii-dev: fatal error: mpi.h: No such file 
or directory
849764 was not blocked by any bugs.
849764 was not blocking any bugs.
Added blocking bug(s) of 849764: 855328
> severity 849764 important
Bug #849764 [libdeal.ii-dev] libdeal.ii-dev: fatal error: mpi.h: No such file 
or directory
Severity set to 'important' from 'normal'
> user release.debian@packages.debian.org
Setting user to release.debian@packages.debian.org (was gin...@debian.org).
> usertag 854905 binnmu
Usertags were: nmu.
Usertags are now: binnmu nmu.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
849764: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=849764
854905: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=854905
855328: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855328
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Processed: add nmu patch for this bug, however encountered FTBFS due to testsuite failure

2017-02-17 Thread Debian Bug Tracking System
Processing control commands:

> tags -1 +patch
Bug #851578 [python-numba] python-numba: fails to install: SyntaxError: invalid 
syntax
Added tag(s) patch.

-- 
851578: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=851578
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Processed: Re: Bug#855130: med-fichier: MED library is not compatible with HDF5 1.10

2017-02-17 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 + patch
Bug #855130 [src:med-fichier] med-fichier: MED library is not compatible with 
HDF5 1.10
Added tag(s) patch.

-- 
855130: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855130
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Bug#851578: marked as done (python-numba: fails to install: SyntaxError: invalid syntax)

2017-02-17 Thread Debian Bug Tracking System
Your message dated Fri, 17 Feb 2017 18:48:39 +
with message-id 
and subject line Bug#851578: fixed in numba 0.30.0-3
has caused the Debian Bug report #851578,
regarding python-numba: fails to install: SyntaxError: invalid syntax
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
851578: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=851578
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: python-numba
Version: 0.30.0-2
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package failed to install. As
per definition of the release team this makes the package too buggy for
a release, thus the severity.

>From the attached log (scroll to the bottom...):

  Selecting previously unselected package python-numba.
  (Reading database ... 
(Reading database ... 5949 files and directories currently installed.)
  Preparing to unpack .../python-numba_0.30.0-2_amd64.deb ...
  Unpacking python-numba (0.30.0-2) ...
  Setting up python-numba (0.30.0-2) ...
File "/usr/lib/python2.7/dist-packages/numba/tests/annotation_usecases.py", 
line 12
  def __init__(self, v: int):
  ^
  SyntaxError: invalid syntax
  
  dpkg: error processing package python-numba (--configure):
   subprocess installed post-installation script returned error exit status 101
  Errors were encountered while processing:
   python-numba


cheers,

Andreas


python-numba_0.30.0-2.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: numba
Source-Version: 0.30.0-3

We believe that the bug you reported is fixed in the latest version of
numba, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 851...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Daniel Stender  (supplier of updated numba package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Fri, 17 Feb 2017 19:11:48 +0100
Source: numba
Binary: python-numba python3-numba numba-doc
Architecture: source all amd64
Version: 0.30.0-3
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Daniel Stender 
Description:
 numba-doc  - native machine code compiler for Python (docs)
 python-numba - native machine code compiler for Python 2
 python3-numba - native machine code compiler for Python 3
Closes: 851578
Changes:
 numba (0.30.0-3) experimental; urgency=medium
 .
   [ lumin ]
   * Remove unwanted file "annotation_usecases.py" for the python2
 package (Closes: #851578).
   * Add basic autopkgtest support.
Checksums-Sha1:
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python3-numba_0.30.0-3_amd64.deb
Checksums-Sha256:
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numba_0.30.0-3_amd64.buildinfo
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python-numba-dbgsym_0.30.0-3_amd64.deb
 3ced33d434d5ff4bee48d470d1d4f1cec08b6569376d3a91d50174f2c4a5493c 837420 
python-numba_0.30.0-3_amd64.deb
 a5556bce3f56d264f5074eebd60ecf20658de203d05b381bc02c6ddc7483b2d

Processed (with 1 error): reassign 816699

2017-02-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 816699 src:ga
Bug #816699 [src:ga,libarmci-mpi-dev] libga-dev and libarmci-mpi-dev: error 
when trying to install together
Bug reassigned from package 'src:ga,libarmci-mpi-dev' to 'src:ga'.
No longer marked as found in versions libarmci-mpi-dev/0.0~git20160222-1 and 
ga/5.3+dfsg-1.
Ignoring request to alter fixed versions of bug #816699 to the same values 
previously set
> found 816699 src:ga/5.3+dfsg-1
Unknown command or malformed arguments to command.
> thanks
Stopping processing here.

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Processed: unarchiving 845851, found 845851 in 1.8.1-1, user debian...@lists.debian.org, usertagging 845851 ...

2017-02-20 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> unarchive 845851
Bug #845851 {Done: Gert Wollny } [gnustep-sqlclient] 
gnustep-sqlclient: switch to build depend on the metapackage 
default-libmysqlclient-dev
Unarchived Bug 845851
> found 845851 1.8.1-1
Bug #845851 {Done: Gert Wollny } [gnustep-sqlclient] 
gnustep-sqlclient: switch to build depend on the metapackage 
default-libmysqlclient-dev
There is no source info for the package 'gnustep-sqlclient' at version 
'1.8.1-1' with architecture ''
Unable to make a source version for version '1.8.1-1'
Marked as found in versions 1.8.1-1 and reopened.
> user debian...@lists.debian.org
Setting user to debian...@lists.debian.org (was a...@debian.org).
> usertags 845851 piuparts
There were no usertags set.
Usertags are now: piuparts.
> affects 845851 + libsqlclient1.8
Bug #845851 [gnustep-sqlclient] gnustep-sqlclient: switch to build depend on 
the metapackage default-libmysqlclient-dev
Added indication that 845851 affects libsqlclient1.8
> found 845848 0.6.30+dfsg-1
Bug #845848 [gnokii] gnokii: switch to build depend on the metapackage 
default-libmysqlclient-dev
Marked as found in versions gnokii/0.6.30+dfsg-1.
> affects 845848 + gnokii-smsd-mysql
Bug #845848 [gnokii] gnokii: switch to build depend on the metapackage 
default-libmysqlclient-dev
Added indication that 845848 affects gnokii-smsd-mysql
> usertags 845848 piuparts
There were no usertags set.
Usertags are now: piuparts.
> affects 789927 + gcin-anthy
Bug #789927 [libanthyinput0] libanthyinput0: fails to upgrade from 'sid' - 
trying to overwrite /usr/lib/x86_64-linux-gnu/libanthyinput.so.0.0.0'
Added indication that 789927 affects gcin-anthy
> found 789927 gcin-anthy/2.8.5+dfsg1-1~exp1
Bug #789927 [libanthyinput0] libanthyinput0: fails to upgrade from 'sid' - 
trying to overwrite /usr/lib/x86_64-linux-gnu/libanthyinput.so.0.0.0'
The source gcin-anthy and version 2.8.5+dfsg1-1~exp1 do not appear to match any 
binary packages
Marked as found in versions gcin-anthy/2.8.5+dfsg1-1~exp1.
> found 851578 0.30.0-1
Bug #851578 {Done: Daniel Stender } [python-numba] 
python-numba: fails to install: SyntaxError: invalid syntax
Marked as found in versions numba/0.30.0-1.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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789927: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=789927
845848: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=845848
845851: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=845851
851578: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=851578
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Processed: src:nlopt: Please provide binary package for cxx library

2017-02-20 Thread Debian Bug Tracking System
Processing control commands:

> block 855597 by -1
Bug #855597 [wnpp] ITP: phyx -- phylogenetic analyses on trees and sequences 
for UNIX
855597 was not blocked by any bugs.
855597 was not blocking any bugs.
Added blocking bug(s) of 855597: 855600

-- 
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Processed: Fixed

2017-02-21 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> fixed 855789 1:7.600.2+dfsg-2
Bug #855789 [armadillo] aliasing bug while setting array sizes
There is no source info for the package 'armadillo' at version 
'1:7.600.2+dfsg-2' with architecture ''
Unable to make a source version for version '1:7.600.2+dfsg-2'
Marked as fixed in versions 1:7.600.2+dfsg-2.
> tags 855789 + patch
Bug #855789 [armadillo] aliasing bug while setting array sizes
Added tag(s) patch.
> thanks
Stopping processing here.

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Processed: Re: Bug#794856: fixed in opencv 3.0.0+dfsg-1~exp1

2017-02-21 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 794856 pending
Bug #794856 {Done: Nobuhiro Iwamatsu } [src:opencv] 
opencv: non DFSG file in the source package
Added tag(s) pending.
> thanks
Stopping processing here.

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Bug#794856: marked as done (opencv: non DFSG file in the source package)

2017-02-22 Thread Debian Bug Tracking System
Your message dated Wed, 22 Feb 2017 08:50:22 +
with message-id 
and subject line Bug#794856: fixed in opencv 2.4.9.1+dfsg1-1
has caused the Debian Bug report #794856,
regarding opencv: non DFSG file in the source package
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
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Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: opencv
Version: 2.4.9.1+dfsg-1.1
Severity: Serious
Justification: non DFSG file in the source package
User: locutusofb...@debian.org
Usertags: license-problem-non-free-img-lenna

Hi opencv Maintainer(s),
your package has been found to contain a copy of a non DFSG
file, that makes your package non DFSG.

This image (called lenna.jpg, or lena.jpg with some variants)
is an image of Lena Söderberg, photographed by Dwight Hooker,
cropped from the centerfold of the November 1972 issue of Playboy magazine.

This file is to be considered distributable but non free
(at the end of this bug report you will find a link to the lintian tag,
with a more complete description of the issue and references)

Below a list of the affected files:
- samples/c/lena.jpg
- samples/cpp/lena.jpg
- samples/cpp/tutorial_code/images/lena.png
- doc/tutorials/introduction/clojure_dev_intro/images/lena.png
- doc/tutorials/introduction/desktop_java/images/lena.png
- modules/java/android_test/res/drawable/lena.jpg
- samples/winrt/OcvImageProcessing/OcvImageProcessing/Assets/Lena.png
- samples/java/clojure/simple-sample/resources/images/lena.png

note, I did stop checking for the all files as soon as I found one
good match, so they might be not all bad references, please update
this bug if not correct.

More information about this issue can be found on the
license-problem-non-free-img-lenna lintian tag [1] and Debian bug [2]

[1] https://lintian.debian.org/tags/license-problem-non-free-img-lenna.html
[2] https://bugs.debian.org/771191

thanks,

Gianfranco
--- End Message ---
--- Begin Message ---
Source: opencv
Source-Version: 2.4.9.1+dfsg1-1

We believe that the bug you reported is fixed in the latest version of
opencv, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 794...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Jochen Sprickerhof  (supplier of updated opencv package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Sun, 19 Feb 2017 17:15:16 +0100
Source: opencv
Binary: opencv-doc libcv-dev libcv2.4 libhighgui-dev libhighgui2.4 libcvaux-dev 
libcvaux2.4 libopencv-dev opencv-data libopencv-core-dev libopencv-core2.4v5 
libopencv-ml-dev libopencv-ml2.4v5 libopencv-imgproc-dev libopencv-imgproc2.4v5 
libopencv-video-dev libopencv-video2.4v5 libopencv-objdetect-dev 
libopencv-objdetect2.4v5 libopencv-highgui-dev libopencv-highgui2.4-deb0 
libopencv-calib3d-dev libopencv-calib3d2.4v5 libopencv-flann-dev 
libopencv-flann2.4v5 libopencv-features2d-dev libopencv-features2d2.4v5 
libopencv-legacy-dev libopencv-legacy2.4v5 libopencv-contrib-dev 
libopencv-contrib2.4v5 libopencv-ts-dev libopencv-ts2.4v5 libopencv-photo-dev 
libopencv-photo2.4v5 libopencv-videostab-dev libopencv-videostab2.4v5 
libopencv-stitching-dev libopencv-stitching2.4v5 libopencv-gpu-dev 
libopencv-gpu2.4v5 libopencv-superres-dev libopencv-superres2.4v5 
libopencv-ocl-dev libopencv-ocl2.4v5 libopencv2.4-java libopencv2.4-jni 
python-opencv
Architecture: source
Version: 2.4.9.1+dfsg1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Jochen Sprickerhof 
Description:
 libcv-dev  - Translation package for libcv-dev
 libcv2.4   - computer vision library - libcv* translation package
 libcvaux-dev - Translation package for libcvaux-dev
 libcvaux2.4 - computer vision library - libcvaux translation package
 libhighgui-dev - Translation package for libhighgui-dev
 libhighgui2.4 - computer vision library - libhighgui translation package
 libopencv-calib3d-dev - development files for libopencv-calib3d
 libopencv-calib3d2.4v5 - computer vision Camera Calibration library
 libopencv-contrib-dev - development files for libopencv-contrib
 libopencv-contrib2.4v5

Processed: tagging 855078

2017-02-22 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 855078 + upstream
Bug #855078 [src:giac] giac: FTBFS: [algo.pdf] Error 139 (Segmentation fault)
Added tag(s) upstream.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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debian-science-maintainers@lists.alioth.debian.org

2017-02-22 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> forwarded 855078 http://xcas.e.ujf-grenoble.fr/XCAS/viewtopic.php?f=4&t=1785
Bug #855078 [src:giac] giac: FTBFS: [algo.pdf] Error 139 (Segmentation fault)
Set Bug forwarded-to-address to 
'http://xcas.e.ujf-grenoble.fr/XCAS/viewtopic.php?f=4&t=1785'.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Processed: reassign 850229 dune-grid

2017-02-22 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 850229 dune-grid
Bug #850229 [openmpi-bin] openmpi-bin: default for oversubscription changed
Bug #850559 [openmpi-bin] openmpi-bin: default for oversubscription changed
Bug reassigned from package 'openmpi-bin' to 'dune-grid'.
Bug reassigned from package 'openmpi-bin' to 'dune-grid'.
No longer marked as found in versions openmpi/2.0.2~git.20161225-8.
No longer marked as found in versions openmpi/2.0.2~git.20161225-8.
Ignoring request to alter fixed versions of bug #850229 to the same values 
previously set
Ignoring request to alter fixed versions of bug #850559 to the same values 
previously set
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
850229: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=850229
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Processed: reassign 850229 to src:dune-common, severity of 850229 is minor, tagging 850229

2017-02-22 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 850229 src:dune-common
Bug #850229 [dune-grid] openmpi-bin: default for oversubscription changed
Bug #850559 [dune-grid] openmpi-bin: default for oversubscription changed
Bug reassigned from package 'dune-grid' to 'src:dune-common'.
Bug reassigned from package 'dune-grid' to 'src:dune-common'.
Ignoring request to alter found versions of bug #850229 to the same values 
previously set
Ignoring request to alter found versions of bug #850559 to the same values 
previously set
Ignoring request to alter fixed versions of bug #850229 to the same values 
previously set
Ignoring request to alter fixed versions of bug #850559 to the same values 
previously set
> severity 850229 minor
Bug #850229 [src:dune-common] openmpi-bin: default for oversubscription changed
Bug #850559 [src:dune-common] openmpi-bin: default for oversubscription changed
Severity set to 'minor' from 'serious'
Severity set to 'minor' from 'serious'
> tags 850229 + pending
Bug #850229 [src:dune-common] openmpi-bin: default for oversubscription changed
Bug #850559 [src:dune-common] openmpi-bin: default for oversubscription changed
Added tag(s) pending.
Added tag(s) pending.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
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Processed: your mail

2017-02-22 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 855883 gcc-6
Bug #855883 [src:pybind11] pybind11: FTBFS in stretch
Bug reassigned from package 'src:pybind11' to 'gcc-6'.
No longer marked as found in versions pybind11/2.0.1-1.
Ignoring request to alter fixed versions of bug #855883 to the same values 
previously set
> affects 855883 pybind11
Bug #855883 [gcc-6] pybind11: FTBFS in stretch
Added indication that 855883 affects pybind11
>
End of message, stopping processing here.

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Processed: user debian...@lists.debian.org, usertagging 846695, usertagging 843527, affects 843527 ...

2017-02-23 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> user debian...@lists.debian.org
Setting user to debian...@lists.debian.org (was a...@debian.org).
> usertags 846695 piuparts
Usertags were: qa-ftbfs-20161202 qa-ftbfs.
Usertags are now: qa-ftbfs-20161202 piuparts qa-ftbfs.
> usertags 843527 piuparts
There were no usertags set.
Usertags are now: piuparts.
> affects 843527 + libghc-fail-doc
Bug #843527 [src:haskell-fail] haskell-fail: FTBFS: haddock: No input file(s).
Added indication that 843527 affects libghc-fail-doc
> usertags 851987 piuparts
There were no usertags set.
Usertags are now: piuparts.
> usertags 813083 piuparts
There were no usertags set.
Usertags are now: piuparts.
> affects 813083 + python-pyviennacl python3-pyviennacl
Bug #813083 [src:pyviennacl] pyviennacl: FTBFS: src/ viennacl/vector.h:225:34: 
error: no matches converting function ‘project’ to type ‘class 
viennacl::vector range >
Added indication that 813083 affects python-pyviennacl and python3-pyviennacl
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Bug#854502: marked as done (pybind11-dev: cmake configuration scripts are not installed)

2017-02-23 Thread Debian Bug Tracking System
Your message dated Fri, 24 Feb 2017 07:48:47 +
with message-id 
and subject line Bug#854502: fixed in pybind11 2.0.1-2
has caused the Debian Bug report #854502,
regarding pybind11-dev: cmake configuration scripts are not installed
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


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Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: pybind11-dev
Version: 2.0.1-1
Severity: important

Dear Maintainer,

pybind11 includes cmake scripts (as of 2.0) to enable CMake-using projects to
correctly set up compiler flags and include directories using a cmake standard:

find_package(pybind11)

This fails with the current pybind11 package as the cmake scripts aren't being
installed.

Tagging this 'important' as this is the upstream-recommended way to properly
use pybind11 in CMake projects.



-- System Information:
Debian Release: 9.0
  APT prefers unstable
  APT policy: (500, 'unstable'), (500, 'testing'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.9.0-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_CA.UTF-8, LC_CTYPE=en_CA.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)

pybind11-dev depends on no packages.

pybind11-dev recommends no packages.

Versions of packages pybind11-dev suggests:
ii  libeigen3-dev  3.3.2-1
pn  pybind11-doc   
--- End Message ---
--- Begin Message ---
Source: pybind11
Source-Version: 2.0.1-2

We believe that the bug you reported is fixed in the latest version of
pybind11, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 854...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ghislain Antony Vaillant  (supplier of updated pybind11 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 23 Feb 2017 13:16:46 +
Source: pybind11
Binary: pybind11-dev pybind11-doc python-pybind11 python3-pybind11
Architecture: source
Version: 2.0.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ghislain Antony Vaillant 
Description:
 pybind11-dev - seamless operability between C++11 and Python
 pybind11-doc - documentation for pybind11
 python-pybind11 - pybind11 helper module for Python 2
 python3-pybind11 - pybind11 helper module for Python 3
Closes: 854502
Changes:
 pybind11 (2.0.1-2) unstable; urgency=medium
 .
   * Fix missing CMake package configuration in -dev package
 - New patch 0002-Arch-indep-CMake-package-configuration.patch
 - Install the missing CMake package configuration
 - Use CMake to build the autopkgtest example tests
 Thanks to Jason Rhinelander for reporting (Closes: #854502)
Checksums-Sha1:
 051431e4caf654fe18d255941f754c1cc64caf24 2454 pybind11_2.0.1-2.dsc
 ff8345f61496c7f69dd7c2ca41beef2645c0b728 5824 pybind11_2.0.1-2.debian.tar.xz
Checksums-Sha256:
 d7876f30661bb381532efd32545894760457e8d122be073ba569a3cf783e3f2c 2454 
pybind11_2.0.1-2.dsc
 9fac941217e1970bf4c36ca2b1dcfd858a05b34b5347d018caf004092e3f4e86 5824 
pybind11_2.0.1-2.debian.tar.xz
Files:
 c5aa3d560eeb72469c06f2c94b08fb6a 2454 libs optional pybind11_2.0.1-2.dsc
 7855b3a7fb2b049fcefe8e03b130f0a1 5824 libs optional 
pybind11_2.0.1-2.debian.tar.xz

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Bug#855615: marked as done (tachyon: not binNMU safe)

2017-02-24 Thread Debian Bug Tracking System
Your message dated Fri, 24 Feb 2017 15:51:21 +
with message-id 
and subject line Bug#855615: fixed in tachyon 0.99~b6+dsx-8
has caused the Debian Bug report #855615,
regarding tachyon: not binNMU safe
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
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Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: tachyon
Version: 0.99~b6+dsx-7
Severity: serious

Hi,

tachyon was recently binNMUed on mips* as part of fixing the fallout of
the binutils symbol table bug (#844227) but unfortunately it is now
uninstallable on mips.

Multiple packages are affected, but for example the Depends line of
libtachyon-mpich-0-dev contains this on mips which is obviously
unsatisfiable:

Depends: libtachyon-dev-common (= 0.99~b6+dsx-7), libtachyon-mpich-0 (= 
0.99~b6+dsx-7+b1), libtachyon-dev-common (= 0.99~b6+dsx-7+b1)

This is likely caused by the use of dh_installdocs --link-doc (see
#747141)

Thanks,
James



signature.asc
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: tachyon
Source-Version: 0.99~b6+dsx-8

We believe that the bug you reported is fixed in the latest version of
tachyon, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 855...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Jerome Benoit  (supplier of updated tachyon package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Fri, 24 Feb 2017 13:51:03 +
Source: tachyon
Binary: libtachyon-serial-0 libtachyon-serial-0-dev libtachyon-mt-0 
libtachyon-mt-0-dev libtachyon-openmpi-0 libtachyon-openmpi-0-dev 
libtachyon-mpich-0 libtachyon-mpich-0-dev libtachyon-dev-common 
libtachyon-mpi-dev tachyon tachyon-bin-nox tachyon-bin-ogl tachyon-doc
Architecture: source
Version: 0.99~b6+dsx-8
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Jerome Benoit 
Description:
 libtachyon-dev-common - Parallel/Multiprocessor Ray Tracing Library - 
development - commo
 libtachyon-mpi-dev - Parallel/Multiprocessor Ray Tracing Library - development 
- defau
 libtachyon-mpich-0 - Parallel/Multiprocessor Ray Tracing Library - runtime - 
MPICH fla
 libtachyon-mpich-0-dev - Parallel/Multiprocessor Ray Tracing Library - 
development - MPICH
 libtachyon-mt-0 - Parallel/Multiprocessor Ray Tracing Library - runtime - MT 
flavou
 libtachyon-mt-0-dev - Parallel/Multiprocessor Ray Tracing Library - 
development - MT fl
 libtachyon-openmpi-0 - Parallel/Multiprocessor Ray Tracing Library - runtime - 
OpenMPI f
 libtachyon-openmpi-0-dev - Parallel/Multiprocessor Ray Tracing Library - 
development - OpenM
 libtachyon-serial-0 - Parallel/Multiprocessor Ray Tracing Library - runtime - 
serial fl
 libtachyon-serial-0-dev - Parallel/Multiprocessor Ray Tracing Library - 
development - seria
 tachyon- Parallel/Multiprocessor Standalone Ray Tracer - metapackage
 tachyon-bin-nox - Parallel/Multiprocessor Standalone Ray Tracer - with no X 
support
 tachyon-bin-ogl - Parallel/Multiprocessor Standalone Ray Tracer - with OpenGL 
displ
 tachyon-doc - Parallel/Multiprocessor Ray Tracing System - reference manual
Closes: 855615
Changes:
 tachyon (0.99~b6+dsx-8) unstable; urgency=medium
 .
   * Serious bug fix release (Closes: #855615) / Debianization:
 - d/rules:
   - link-doc, drop (See: #747141);
 - d/control:
   - -dev Depends fields, harden.
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Files:
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Bug#855130: marked as done (med-fichier: MED library is not compatible with HDF5 1.10)

2017-02-24 Thread Debian Bug Tracking System
Your message dated Sat, 25 Feb 2017 00:19:09 +
with message-id 
and subject line Bug#855130: fixed in med-fichier 3.0.6-11
has caused the Debian Bug report #855130,
regarding med-fichier: MED library is not compatible with HDF5 1.10
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
855130: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855130
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: med-fichier
Version: 3.0.6-11
Severity: grave
Justification: renders package unusable

Hi,

From the Salome Platform support forum [1]:

> Problems with Salome and Code Saturne in Debian
> Posted by Elektrix at January 03. 2017
> 
> Hello all,
> 
> I'm trying to set up a CFD case with Salome, export the mesh in a MED file 
> and then process it with Code Saturne. CS doesn't read the MED file and gives 
> the error in the preprocessing stage:
> 
> _MEDdatasetRd.c [139] : Erreur à la lecture du dataset
> _MEDdatasetRd.c [139] : COO
> HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
>   #000: ../../../src/H5Dio.c line 170 in H5Dread(): can't read data
> major: Dataset
> minor: Read failed
>   #001: ../../../src/H5Dio.c line 418 in H5D__read(): unable to set up type 
> info
> major: Dataset
> minor: Unable to initialize object
>   #002: ../../../src/H5Dio.c line 953 in H5D__typeinfo_init(): not a datatype
> major: Invalid arguments to routine
> minor: Inappropriate type
> _MEDdatasetRd.c [142] : _dataset = 2
> _MEDdatasetRd.c [143] : _i = 0
> _MEDdatasetRd.c [144] : (*filter).memspace[_i] = 2
> _MEDdatasetRd.c [145] : (*filter).diskspace[_i] = 3
> _MEDmeshAdvancedRd30.c [462] : Erreur à la lecture du dataset
> _MEDmeshAdvancedRd30.c [462] :
> _MEDmeshAdvancedRd30.c [463] : meshname = "Mesh_water"
> _MEDmeshAdvancedRd30.c [463] : numit = -1
> _MEDmeshAdvancedRd30.c [463] : numdt = -1
> _MEDmeshAdvancedRd30.c [463] : _datagroupname2 = "NOE"
> _MEDmeshAdvancedRd30.c [464] : _datagroupname3 = ""
> _MEDmeshAdvancedRd30.c [464] : _profilename = "MED_NO_PROFILE_INTERNAL"
> 
> The problem can be because I installed Salome from the SALOME-7.6.0-DB07.tgz 
> archive whilst Code Saturne is a Debian package and is installed via the 
> Debian package system which is much easier than installing the original 
> package. So the med and hdf5 libraries of CS come from the Debian 
> repositories. I can't use newer versions of Salome (7.7.1 or 7.8.0) as they 
> produce MED3.1 files but my CS reads only MED3.0 files.
> 
> The details of my machine:
> 
> Debian stretch (testing) on AMD64
> 
> Salome 7.6.0 from SALOME-7.6.0-DB07.tgz
> 
> Code Saturne 4.3 Debian package
> 
> libmed 3.0.6-10.1 Debian package
> 
> hdf5 1.10.0 Debian package
> 
> Not knowing if this problem comes from how I create the mesh I tried to run 
> one of the test cases from the Code Saturne tutorials but ran into other 
> problems.
> 
> If you need any other information pleas let me know. Any hint on how to go 
> further is very welcome.
> 
> Best regards
> 
> Elektrix



> Re: Problems with Salome and Code Saturne in Debian
> Posted by Yvan Fournier at Monday 16:21
> 
> Hello,
> 
> I was contacted by the Debian maintainer relative to this, so it seems the 
> bug was reported.
> 
> The root problem is that the MED library is not compatible with HDF5 1.10 
> yet. So reverting to HDF5 1.8 as indicated is the solution for now, but the 
> better solution would be for MED to handle compatibility with both HDF5 1.8 
> and HDF5 1.10 (or at least 1.10 for future versions).
> 
> Best regards,
> 
> Yvan

[1] http://www.salome-platform.org/forum/forum_9/122041955

Thanks,

_g.
--- End Message ---
--- Begin Message ---
Source: med-fichier
Source-Version: 3.0.6-11

We believe that the bug you reported is fixed in the latest version of
med-fichier, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 855...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Anton Gladky  (supplier of updated med-fichier package)

(This message was generated automatically a

Bug#856175: marked as done (GUI is broken)

2017-02-25 Thread Debian Bug Tracking System
Your message dated Sun, 26 Feb 2017 00:03:32 +
with message-id 
and subject line Bug#856175: fixed in yade 2017.01a-3
has caused the Debian Bug report #856175,
regarding GUI is broken
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
856175: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=856175
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: yade
Version: 2017.01a-2
Severity: serious
Tags: upstream

After calling "from yade import qt ; qt.Controller()" only the
black window is shown without control elements. The same
effect after calling qt.View().
--- End Message ---
--- Begin Message ---
Source: yade
Source-Version: 2017.01a-3

We believe that the bug you reported is fixed in the latest version of
yade, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 856...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Anton Gladky  (supplier of updated yade package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 26 Feb 2017 00:47:26 +0100
Source: yade
Binary: yade libyade python-yade yade-doc
Architecture: source
Version: 2017.01a-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Anton Gladky 
Description:
 libyade- Platform for discrete element modeling. Libraries
 python-yade - Platform for discrete element modeling. Python bindings
 yade   - Platform for discrete element modeling
 yade-doc   - Platform for discrete element modeling. Documentation
Closes: 856175
Changes:
 yade (2017.01a-3) unstable; urgency=medium
 .
   * [14120f5] Initialize GUI in IPython 5. (Closes: #856175)
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yade_2017.01a-3_source.buildinfo

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-END PGP SIGNATURE End Message ---
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Bug#816800: marked as done ([gazebo] Qt4's WebKit removal)

2017-02-26 Thread Debian Bug Tracking System
Your message dated Sun, 26 Feb 2017 20:21:49 +0100
with message-id 

and subject line Re: Delivery Status Notification (Failure)
has caused the Debian Bug report #816800,
regarding [gazebo] Qt4's WebKit removal
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
816800: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=816800
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: gazebo
Version: 7.0.0+dfsg-1
User: debian-qt-...@lists.debian.org
Usertags: qt4webkit-removal

Hi! As you might know we the Qt/KDE team are preparing to remove Qt4's WebKit
as announced in [announce].

[announce] 
<https://lists.debian.org/debian-devel-announce/2015/05/msg1.html>

Basically we are about to get the last Qt4 point release and upstream is
migrating from WebKit to Blink in the Qt5 series, so we won't have much 
upstreams
support for maintaining Qt4's WebKit (Qt5's WebKit is expected to stay supported
until Qt6).

In order to make this move, all packages directly or indirectly depending on
the Qt4's WebKit library have to either get ported to Qt5 or eventually get
removed from the Debian repositories.

Therefore, please take the time and:
- contact your upstream (if existing) and ask about the state of a Qt5 
port of your application
- if there are no activities regarding porting, investigate whether there are 
suitable alternatives for your users
- if there is a Qt5 port that is not yet packaged, consider packaging it
- if both the Qt4 and the Qt5 versions already coexist in the Debian 
archives, consider removing the Qt4 version

= Porting =

Some of us where involved in various Qt4 to Qt5 migrations [migration] and we
know for sure that porting stuff from Qt4 to Qt5 is much much easier and less
painful than it was from Qt3 to Qt4.

We also understand that there is still a lot of software still using Qt4. In
order to ease the transition time we have provided Wheezy backports for Qt5.

Don't forget to take a look at the C++ API changes page [apichanges] whenever
you start porting your application.

[migration] http://pkg-kde.alioth.debian.org/packagingqtbasedstuff.html
[apichanges] http://doc.qt.io/qt-5/sourcebreaks.html

If you have any questions, please reply to this mail and CC me.

On behalf of the Qt4 maintainers,

--
Dmitry Shachnev

signature.asc
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Gazebo upstream has removed the dependency on webkit qt and the latest
version in debian is already webkit free:
https://anonscm.debian.org/cgit/debian-science/packages/gazebo
.git/commit/?id=91b89c43f0e9860ea5bb05239f230b7f927dad96

On Sun, Feb 26, 2017 at 8:14 PM, Mail Delivery Subsystem <
mailer-dae...@googlemail.com> wrote:

> [image: Error Icon]
> Message not delivered
> There was a problem delivering your message to
> *816800+d...@bugs.debian.org*. See the technical details below, or try
> resending in a few minutes.
> The response from the remote server was:
>
> 550 Unknown or archived bug
>
> Final-Recipient: rfc822; 816800+d...@bugs.debian.org
> Action: failed
> Status: 5.0.0
> Remote-MTA: dns; buxtehude.debian.org. (2607:f8f0:614:1::1274:39, the
> server
>  for the domain bugs.debian.org.)
> Diagnostic-Code: smtp; 550 Unknown or archived bug
> Last-Attempt-Date: Sun, 26 Feb 2017 11:14:34 -0800 (PST)
>
>
> -- Forwarded message --
> From: Jose Luis Rivero 
> To: 816800+d...@bugs.debian.org
> Cc:
> Bcc:
> Date: Sun, 26 Feb 2017 20:14:24 +0100
> Subject: Re: Processed: Qt4's WebKit removal: rising severity to important
> Gazebo upstream has removed the dependency on webkit qt and the latest
> version in debian is already webkit free:
> https://anonscm.debian.org/cgit/debian-science/packages/
> gazebo.git/commit/?id=91b89c43f0e9860ea5bb05239f230b7f927dad96
>
>
> On Mon, Oct 3, 2016 at 4:28 PM, Debian Bug Tracking System <
> ow...@bugs.debian.org> wrote:
>
> > Processing control commands:
> >
> > > severity -1 important
> > Bug #816800 [src:gazebo] [gazebo] Qt4's WebKit removal
> > Severity set to 'important' from 'normal'
> >
> > --
> > 816800: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=816800
> > Debian Bug Tracking System
> > Contact ow...@bugs.debian.org with problems
> >
> >
>
>
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Bug#856218: marked as done (FTBFS during documentation build)

2017-02-26 Thread Debian Bug Tracking System
Your message dated Sun, 26 Feb 2017 19:33:55 +
with message-id 
and subject line Bug#856218: fixed in yade 2017.01a-4
has caused the Debian Bug report #856218,
regarding FTBFS during documentation build
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
856218: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=856218
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: yade
Version: 2017.01a-2
Severity: serious
Tags: upstream

Yade fails to build from scratch during documentation generation [1].
Relevant lines in the build log:

==
(/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)
  ** (sphinx) defining (legacy) text style macros without \sphinx prefix
  ** if clashes with packages, set latex_keep_old_macro_names=False in conf.py

  ! LaTeX Error: Command \strong already defined.
  Or name \end... illegal, see p.192 of the manual.

  See the LaTeX manual or LaTeX Companion for explanation.
  Type  H   for immediate help.
  ...  

  l.912 }

  ? 
  ! Emergency stop.
...  
  
l.912 }
  
==
--- End Message ---
--- Begin Message ---
Source: yade
Source-Version: 2017.01a-4

We believe that the bug you reported is fixed in the latest version of
yade, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 856...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Anton Gladky  (supplier of updated yade package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 26 Feb 2017 20:21:22 +0100
Source: yade
Binary: yade libyade python-yade yade-doc
Architecture: source
Version: 2017.01a-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Anton Gladky 
Description:
 libyade- Platform for discrete element modeling. Libraries
 python-yade - Platform for discrete element modeling. Python bindings
 yade   - Platform for discrete element modeling
 yade-doc   - Platform for discrete element modeling. Documentation
Closes: 856218
Changes:
 yade (2017.01a-4) unstable; urgency=medium
 .
   * [e248862] Fix FTBFS during documentation build. (Closes: #856218)
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yade_2017.01a-4_source.buildinfo

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Bug#850559: marked as done (openmpi-bin: default for oversubscription changed)

2017-02-27 Thread Debian Bug Tracking System
Your message dated Mon, 27 Feb 2017 12:36:30 +0100 (CET)
with message-id 
and subject line Seems fixed
has caused the Debian Bug report #850229,
regarding openmpi-bin: default for oversubscription changed
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
850229: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=850229
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:dune-pdelab
Version: 2.5.0~20161204gdb53a76-3
Severity: serious

Dear maintainer:

I tried to build this package in stretch with "dpkg-buildpackage -A"
but it failed:


[...]
 debian/rules build-indep
dh build-indep --parallel --builddirectory=build
   dh_testdir -i -O--parallel -O--builddirectory=build
   dh_update_autotools_config -i -O--parallel -O--builddirectory=build
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- -DBUILD_SHARED_LIBS=1
cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON 
-DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc 
-DCMAKE_INSTALL_LOCALSTATEDIR=/var -DBUILD_SHARED_LIBS=1
-- The C compiler identification is GNU 6.2.1
-- The CXX compiler identification is GNU 6.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done

[... snipped ...]

Status:FAILED
Output:
   
--
   There are not enough slots available in the system to satisfy the 2 
slots
   that were requested by the application:
 testnonoverlappingsinglephaseflow-ug
   
   Either request fewer slots for your application, or make more slots 
available
   for use.
   
--

==
Name:  testnonoverlappingsinglephaseflow-boilerplate-mpi-2
FullName:  
./dune/pdelab/test/testnonoverlappingsinglephaseflow-boilerplate-mpi-2
Status:FAILED
Output:
   
--
   There are not enough slots available in the system to satisfy the 2 
slots
   that were requested by the application:
 testnonoverlappingsinglephaseflow-boilerplate
   
   Either request fewer slots for your application, or make more slots 
available
   for use.
   
--

==
Name:  testnonoverlapping-mpi-2
FullName:  ./dune/pdelab/test/testnonoverlapping-mpi-2
Status:FAILED
Output:
   
--
   There are not enough slots available in the system to satisfy the 2 
slots
   that were requested by the application:
 testnonoverlapping
   
   Either request fewer slots for your application, or make more slots 
available
   for use.
   
--

/usr/share/dune/dune-debian.mk:16: recipe for target 'override_dh_auto_test' 
failed
make[1]: *** [override_dh_auto_test] Error 1
make[1]: Leaving directory '/<>'
debian/rules:6: recipe for target 'build-indep' failed
make: *** [build-indep] Error 2
dpkg-buildpackage: error: debian/rules build-indep gave error exit status 2


This is how the build ends, and also the relevant part.

The bug should be reproducible with sbuild on a single CPU virtual machine.

Thanks.
--- End Message ---
--- Begin Message ---
I can build dune-grid and dune-pdelab again in stretch, so this bug
seems fixed.

Apparently, some change in the build-dependencies that happened in stretch
between 2017-02-21 and 2017-02-25 made this possible.

Thanks.--- End Message ---
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Bug#850229: marked as done (openmpi-bin: default for oversubscription changed)

2017-02-27 Thread Debian Bug Tracking System
Your message dated Mon, 27 Feb 2017 12:36:30 +0100 (CET)
with message-id 
and subject line Seems fixed
has caused the Debian Bug report #850229,
regarding openmpi-bin: default for oversubscription changed
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
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Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:dune-grid
Version: 2.5.0-1
Severity: serious

Dear maintainer:

I tried to build this package in stretch with "dpkg-buildpackage -A"
(which is what the "Arch: all" autobuilder would do to build it)
but it failed:


[...]
 debian/rules build-indep
dh build-indep --parallel --builddirectory=build
   dh_testdir -i -O--parallel -O--builddirectory=build
   dh_update_autotools_config -i -O--parallel -O--builddirectory=build
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<>'
dh_auto_configure -- -DBUILD_SHARED_LIBS=1
cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON 
-DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc 
-DCMAKE_INSTALL_LOCALSTATEDIR=/var -DBUILD_SHARED_LIBS=1
-- The C compiler identification is GNU 6.2.1
-- The CXX compiler identification is GNU 6.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info

[... snipped ...]

Status:FAILED
Output:
   
--
   There are not enough slots available in the system to satisfy the 2 
slots
   that were requested by the application:
 test-yaspgrid-yaspfactory-1d
   
   Either request fewer slots for your application, or make more slots 
available
   for use.
   
--

==
Name:  test-yaspgrid-yaspfactory-2d-mpi-2
FullName:  ./dune/grid/test/yasp/test-yaspgrid-yaspfactory-2d-mpi-2
Status:FAILED
Output:
   
--
   There are not enough slots available in the system to satisfy the 2 
slots
   that were requested by the application:
 test-yaspgrid-yaspfactory-2d
   
   Either request fewer slots for your application, or make more slots 
available
   for use.
   
--

==
Name:  test-yaspgrid-yaspfactory-3d-mpi-2
FullName:  ./dune/grid/test/yasp/test-yaspgrid-yaspfactory-3d-mpi-2
Status:FAILED
Output:
   
--
   There are not enough slots available in the system to satisfy the 2 
slots
   that were requested by the application:
 test-yaspgrid-yaspfactory-3d
   
   Either request fewer slots for your application, or make more slots 
available
   for use.
   
--

/usr/share/dune/dune-debian.mk:16: recipe for target 'override_dh_auto_test' 
failed
make[1]: *** [override_dh_auto_test] Error 1
make[1]: Leaving directory '/<>'
debian/rules:6: recipe for target 'build-indep' failed
make: *** [build-indep] Error 2
dpkg-buildpackage: error: debian/rules build-indep gave error exit status 2


This is just how the build ends, not necessarily the relevant part.

I've put several build logs here:

https://people.debian.org/~sanvila/build-logs/dune-grid/

If this is really a bug in one of the build-depends, please use reassign and 
affects,
so that this is still visible in the page for this package.

The bug should be reproducible with sbuild on a single CPU virtual machine.
It always fail for me (I tried 10 times in different autobuilders).

Thanks.
--- End Message ---
--- Begin Message ---
I can build dune-grid and dune-pdelab again in stretch, so this bug
seems fixed.

Apparently, some change in the build-dependencies that happened in stretch
between 2017-02-21 and 2017-02-25 made this possible.

Thanks.--- End Message ---
-- 
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Processed: your mail

2017-02-27 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reopen 856218
Bug #856218 {Done: Anton Gladky } [yade] FTBFS during 
documentation build
'reopen' may be inappropriate when a bug has been closed with a version;
all fixed versions will be cleared, and you may need to re-add them.
Bug reopened
No longer marked as fixed in versions yade/2017.01a-4.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Bug#599129: marked as done (gnuplot ignores the geometry command line option)

2017-02-27 Thread Debian Bug Tracking System
Your message dated Mon, 27 Feb 2017 21:34:36 +0200
with message-id <20170227193436.lt6jbbovu6fpucbm@localhost>
and subject line Closing squeeze-only bugs
has caused the Debian Bug report #599129,
regarding gnuplot ignores the geometry command line option
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
599129: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=599129
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: gnuplot
Version: 4.4.0-1
Severity: normal
Tags: squeeze

A plot command opens always a small windows (400x300 ?) regardless of the
command line option "-geometry 1024x768".



-- System Information:
Debian Release: squeeze/sid
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: i386 (i686)

Kernel: Linux 2.6.32.20100921 (SMP w/1 CPU core)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages gnuplot depends on:
ii  gnuplot-nox   4.4.0-1A command-line driven interactive 
ii  gnuplot-x11   4.4.0-1A command-line driven interactive 

gnuplot recommends no packages.

Versions of packages gnuplot suggests:
pn  gnuplot-doc(no description available)

-- no debconf information


--- End Message ---
--- Begin Message ---
Dear submitter,

these bug are tagged squeeze without any wheezy/jessie/stretch tag
implying that the bug is not present in more recent Debian releases.

squeeze is no longer supported.

We are sorry that we couldn't deal with your issue in squeeze.

If this bug was incorrectly tagged squeeze, please reopen the bug
and remove the squeeze tag.

cu
Adrian

-- 

   "Is there not promise of rain?" Ling Tan asked suddenly out
of the darkness. There had been need of rain for many days.
   "Only a promise," Lao Er said.
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Bug#856218: marked as done (FTBFS during documentation build)

2017-02-27 Thread Debian Bug Tracking System
Your message dated Mon, 27 Feb 2017 22:34:05 +
with message-id 
and subject line Bug#856218: fixed in yade 2017.01a-5
has caused the Debian Bug report #856218,
regarding FTBFS during documentation build
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
856218: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=856218
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: yade
Version: 2017.01a-2
Severity: serious
Tags: upstream

Yade fails to build from scratch during documentation generation [1].
Relevant lines in the build log:

==
(/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)
  ** (sphinx) defining (legacy) text style macros without \sphinx prefix
  ** if clashes with packages, set latex_keep_old_macro_names=False in conf.py

  ! LaTeX Error: Command \strong already defined.
  Or name \end... illegal, see p.192 of the manual.

  See the LaTeX manual or LaTeX Companion for explanation.
  Type  H   for immediate help.
  ...  

  l.912 }

  ? 
  ! Emergency stop.
...  
  
l.912 }
  
==
--- End Message ---
--- Begin Message ---
Source: yade
Source-Version: 2017.01a-5

We believe that the bug you reported is fixed in the latest version of
yade, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 856...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Anton Gladky  (supplier of updated yade package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 27 Feb 2017 23:20:27 +0100
Source: yade
Binary: yade libyade python-yade yade-doc
Architecture: source
Version: 2017.01a-5
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Anton Gladky 
Description:
 libyade- Platform for discrete element modeling. Libraries
 python-yade - Platform for discrete element modeling. Python bindings
 yade   - Platform for discrete element modeling
 yade-doc   - Platform for discrete element modeling. Documentation
Closes: 856218
Changes:
 yade (2017.01a-5) unstable; urgency=medium
 .
   * [eb193dd] Revert patch applied by last upload.
   * [11efabc] Stop generating of PDF file. (Closes: #856218)
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 b42ec2412e3cc120ee3709e63dc1dce866e04d42 25182 yade_2017.01a-5_source.buildinfo
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 44e457c3d231990c6a0e096519f36b66 2832 science extra yade_2017.01a-5.dsc
 40502e7647e988dea2447a72df9a958b 31348 science extra 
yade_2017.01a-5.debian.tar.xz
 4d7448bd7718555d8d8dcee439eb3453 25182 science extra 
yade_2017.01a-5_source.buildinfo

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Processed: Re: mclibs: FTBFS: Test failures

2017-02-28 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> retitle 855929 mclibs: FTBFS: LOCB/LOCF: address 0x7f68e28cd740 exceeds the 
> 32 bit address space or is not in the data segments
Bug #855929 [src:mclibs] mclibs: FTBFS: Test failures
Changed Bug title to 'mclibs: FTBFS: LOCB/LOCF: address 0x7f68e28cd740 exceeds 
the 32 bit address space or is not in the data segments' from 'mclibs: FTBFS: 
Test failures'.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Processed: Re: Bug#816305: armci-mpi: FTBFS: tests hang or explicitly fail

2017-03-05 Thread Debian Bug Tracking System
Processing control commands:

> severity -1 serious
Bug #816305 [src:armci-mpi] armci-mpi: FTBFS: tests hang or explicitly fail
Severity set to 'serious' from 'important'

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Processed: Tag 855929 patch

2017-03-05 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 855929 + patch
Bug #855929 [src:mclibs] mclibs: FTBFS: LOCB/LOCF: address 0x7f68e28cd740 
exceeds the 32 bit address space or is not in the data segments
Added tag(s) patch.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Bug#856937: marked as done (libslvs1-dev: missing Depends: libslvs1 (= ${binary:Version}))

2017-03-06 Thread Debian Bug Tracking System
Your message dated Mon, 06 Mar 2017 21:05:32 +
with message-id 
and subject line Bug#856937: fixed in solvespace 2.3+repack1-2
has caused the Debian Bug report #856937,
regarding libslvs1-dev: missing Depends: libslvs1 (= ${binary:Version})
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


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856937: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=856937
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libslvs1-dev
Version: 2.3+repack1-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package ships (or creates)
a broken symlink.

>From the attached log (scroll to the bottom...):

0m21.2s ERROR: FAIL: Broken symlinks:
  /usr/lib/x86_64-linux-gnu/libslvs.so -> libslvs.so.1


cheers,

Andreas


libslvs1-dev_2.3+repack1-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: solvespace
Source-Version: 2.3+repack1-2

We believe that the bug you reported is fixed in the latest version of
solvespace, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 856...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Anton Gladky  (supplier of updated solvespace package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 06 Mar 2017 20:59:20 +0100
Source: solvespace
Binary: solvespace libslvs1 libslvs1-dev
Architecture: source
Version: 2.3+repack1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Anton Gladky 
Description:
 libslvs1   - SolveSpace geometric kernel
 libslvs1-dev - SolveSpace geometric kernel (development files)
 solvespace - Parametric 2d/3d CAD
Closes: 856937
Changes:
 solvespace (2.3+repack1-2) unstable; urgency=medium
 .
   * [0d4dc2b] Add missing dependency on libslvs1. (Closes: #856937)
Checksums-Sha1:
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solvespace_2.3+repack1-2.dsc
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solvespace_2.3+repack1-2.debian.tar.xz
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-END PGP SIGNATURE End Message ---
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Bug#856705: marked as done (graywolf: License violation)

2017-03-06 Thread Debian Bug Tracking System
Your message dated Mon, 06 Mar 2017 21:48:56 +
with message-id 
and subject line Bug#856705: fixed in graywolf 0.1.4+20170306gitecee764-1
has caused the Debian Bug report #856705,
regarding graywolf: License violation
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
856705: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=856705
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: graywolf
Severity: serious

Hi. graywolf is using some numerical routines from numerical recipes. These
are NOT free software and may not be used in a free software project.

For Debian, you can elide these sources. It would also be great if you
talked to upstream so that they stop violating copyrights also.

Look at Ysvd_decompose) in

  src/Ylib/svd.c

A later version of the book chapter this function came from lives here:

  http://numerical.recipes/webnotes/nr3web2.pdf

You can see many similarities. If you look at the older version of the
book, you will see 100% similarities.

The copyright statement is here:

  http://numerical.recipes/public-domain.html

I haven't done a thorough search, and I can imagine the SVD
implementation isn't the only violation here. It would be great if you
looked more thoroughly.

Thanks
--- End Message ---
--- Begin Message ---
Source: graywolf
Source-Version: 0.1.4+20170306gitecee764-1

We believe that the bug you reported is fixed in the latest version of
graywolf, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 856...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ruben Undheim  (supplier of updated graywolf package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 06 Mar 2017 20:26:57 +
Source: graywolf
Binary: libycadgraywolf0 libycadgraywolf-dev libycadgraywolf0-dbg graywolf
Architecture: source
Version: 0.1.4+20170306gitecee764-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ruben Undheim 
Description:
 graywolf   - Placement for digital VLSI design
 libycadgraywolf-dev - Library for graywolf - development files
 libycadgraywolf0 - Library for common functions used by graywolf
 libycadgraywolf0-dbg - debug symbols for libycadgraywolf0
Closes: 856705
Changes:
 graywolf (0.1.4+20170306gitecee764-1) unstable; urgency=medium
 .
   * New upstream GIT HEAD with fixed license violation issue (Closes: #856705)
   * debian/control:
 - New build-dependencies: libgsl-dev, pkg-config
   * Updated debian/libycadgraywolf0.symbols - removed the symbols in license
 violating code.
Checksums-Sha1:
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graywolf_0.1.4+20170306gitecee764.orig.tar.gz
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Processed: tagging 856949

2017-03-07 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 856949 + pending
Bug #856949 [libgiac-dev] libgiac-dev: missing Depends: libgiac0 (= 
${binary:Version})
Added tag(s) pending.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
856949: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=856949
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Bug#857088: marked as done (graywolf: Incomplete debian/copyright?)

2017-03-08 Thread Debian Bug Tracking System
Your message dated Wed, 08 Mar 2017 09:05:28 +
with message-id 
and subject line Bug#857088: fixed in graywolf 0.1.4+20170307gite1bf319-2
has caused the Debian Bug report #857088,
regarding graywolf: Incomplete debian/copyright?
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
857088: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857088
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: graywolf
Version: 0.1.4+20170307gite1bf319-1
Severity: serious
Justication: Policy 12.5
X-Debbugs-CC: Ruben Undheim 

Hi,

I just ACCEPTed graywolf from NEW but noticed it was missing 
attribution in debian/copyright for at least Staf Verhaegen.

(This is not exhaustive so please check over the entire package 
carefully and address these on your next upload.)


Regards,

-- 
  ,''`.
 : :'  : Chris Lamb
 `. `'`  la...@debian.org / chris-lamb.co.uk
   `-
--- End Message ---
--- Begin Message ---
Source: graywolf
Source-Version: 0.1.4+20170307gite1bf319-2

We believe that the bug you reported is fixed in the latest version of
graywolf, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 857...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ruben Undheim  (supplier of updated graywolf package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Wed, 08 Mar 2017 09:25:41 +0100
Source: graywolf
Binary: libycadgraywolf1 libycadgraywolf-dev libycadgraywolf1-dbg graywolf
Architecture: source
Version: 0.1.4+20170307gite1bf319-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ruben Undheim 
Description:
 graywolf   - Placement for digital VLSI design
 libycadgraywolf-dev - Library for graywolf - development files
 libycadgraywolf1 - Library for common functions used by graywolf
 libycadgraywolf1-dbg - debug symbols for libycadgraywolf1
Closes: 857088
Changes:
 graywolf (0.1.4+20170307gite1bf319-2) unstable; urgency=medium
 .
   * debian/copyright:
 - Added Staf Verhaegen (should have been added before uploading 0.1.4-1)
   (Closes: #857088)
 - Added more copyright years for Tim Edwards and Ruben Undheim
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Bug#790035: marked as done (thepeg: please make the build reproducible)

2017-03-08 Thread Debian Bug Tracking System
Your message dated Wed, 08 Mar 2017 23:49:02 +
with message-id 
and subject line Bug#790035: fixed in thepeg 1.8.0-2
has caused the Debian Bug report #790035,
regarding thepeg: please make the build reproducible
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
790035: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=790035
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: thepeg
Version: 1.8.0-1
Severity: wishlist
Tags: patch
User: reproducible-bui...@lists.alioth.debian.org
Usertags: timestamps

Hi,

While working on the “reproducible builds” effort [1], we have noticed
that thepeg could not be built reproducibly.

The attached patch changes the value of HTML_TIMESTAMP in upstream's
doxyfile to NO. Once applied thepeg can be built reproducibly in our
current experimental framework.

Patching upstream doxyfile is necessary in this case because of the
following reasons:

1. Even though the doxygen upstream changed the default value of
HTML_TIMESTAMP from YES to NO this does not affect this package because
the value of HTML_TIMESTAMP is explicitly set to YES.

2. Upstream's doxyfiles cannot reliably be modified to change the value
of HTML_TIMESTAMP during the build process because dh_doxygen is only
run after the build already completed and even adding a new dh command
cannot solve the problem because there exists no sane and reliable
solution to detect the file which will be used as the configuration file
for doxygen (it is not always called doxyfile).

3. In case of this source package a patch against upstream is necessary
in contrast to a patch against Debian rules because this source package
does not call doxygen in debian/rules.

Please also consider forwarding this patch upstream.

Cheers!
akira

 [1]: https://wiki.debian.org/ReproducibleBuilds
Description: Set HTML_TIMESTAMP from YES to NO to make package reproducible

--- thepeg-1.8.0.orig/Doc/refman.conf.in
+++ thepeg-1.8.0/Doc/refman.conf.in
@@ -814,7 +814,7 @@ HTML_STYLESHEET=
 # page will contain the date and time when the page was generated. Setting
 # this to NO can help when comparing the output of multiple runs.
 
-HTML_TIMESTAMP = YES
+HTML_TIMESTAMP = NO
 
 # If the HTML_ALIGN_MEMBERS tag is set to YES, the members of classes,
 # files or namespaces will be aligned in HTML using tables. If set to
--- End Message ---
--- Begin Message ---
Source: thepeg
Source-Version: 1.8.0-2

We believe that the bug you reported is fixed in the latest version of
thepeg, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 790...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Mattia Rizzolo  (supplier of updated thepeg package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Thu, 09 Mar 2017 00:17:21 +0100
Source: thepeg
Binary: thepeg thepeg-gui libthepeg15 libthepeg-dev thepeg-reference
Architecture: source
Version: 1.8.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Mattia Rizzolo 
Description:
 libthepeg-dev - Development library of ThePEG
 libthepeg15 - Run-time library of ThePEG
 thepeg - Toolkit for High Energy Physics Event Generation
 thepeg-gui - Java GUI of ThePEG
 thepeg-reference - Code reference of ThePEG
Closes: 790035
Changes:
 thepeg (1.8.0-2) unstable; urgency=medium
 .
   * Team upload
 .
   [ Lifeng Sun ]
   * Use dh_lintian instead of manually installing the lintian overrides.
   * debian/rules
 + Semplify by using the dh(1) sequencer.
   * debian/control:
 + Add time to Build-Depends.
 + Add graphviz to Build-Depends-Indep.
   * Don't link against LHAPDF on hurd-i386, mips and mipsel. ThePEG requires
 more than 2GB to load libLHAPDF.so to generate ThePEGDefaults.rpo, but
 Debian buildds of these architectures doesn't have enough RAM.
   * Remove lhapdf-tests.patch: lhapdf-pdfsets-minimal now ships PDF sets
 required by the test-suites.
 .
   [ Mattia Rizzolo ]
   * Run `wrap-and-sort -ast`.
   * Bump debheleper compat level to 10.
   * d/control:
 + Add Build-Depend on lhapdf-pdfsets-minimal.
 + U

Bug#856949: marked as done (libgiac-dev: missing Depends: libgiac0 (= ${binary:Version}))

2017-03-11 Thread Debian Bug Tracking System
Your message dated Sat, 11 Mar 2017 17:05:08 +
with message-id 
and subject line Bug#856949: fixed in giac 1.2.3.25+dfsg1-3
has caused the Debian Bug report #856949,
regarding libgiac-dev: missing Depends: libgiac0 (= ${binary:Version})
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
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Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libgiac-dev
Version: 1.2.3.25+dfsg1-2
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package ships (or creates)
a broken symlink.

>From the attached log (scroll to the bottom...):

0m26.1s ERROR: FAIL: Broken symlinks:
  /usr/lib/x86_64-linux-gnu/libgiac.so -> libgiac.so.0.0.0


cheers,

Andreas


libgiac-dev_1.2.3.25+dfsg1-2.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: giac
Source-Version: 1.2.3.25+dfsg1-3

We believe that the bug you reported is fixed in the latest version of
giac, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 856...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ximin Luo  (supplier of updated giac package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Hash: SHA512

Format: 1.8
Date: Sat, 11 Mar 2017 17:33:52 +0100
Source: giac
Binary: libgiac0 libgiac-dev xcas giac-doc
Architecture: source
Version: 1.2.3.25+dfsg1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Ximin Luo 
Description:
 giac-doc   - Computer Algebra System - documentation
 libgiac-dev - Computer Algebra System C++ library - Development files
 libgiac0   - Computer Algebra System C++ library
 xcas   - Computer Algebra System - console and graphical calculator
Closes: 856949
Changes:
 giac (1.2.3.25+dfsg1-3) unstable; urgency=medium
 .
   * Add missing depends from libgiac-dev on libgiac0. (Closes: #856949)
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Bug#816305: marked as done (armci-mpi: FTBFS: tests hang or explicitly fail)

2017-03-12 Thread Debian Bug Tracking System
Your message dated Sun, 12 Mar 2017 20:48:44 +
with message-id 
and subject line Bug#816305: fixed in armci-mpi 0.0~git20160222-2
has caused the Debian Bug report #816305,
regarding armci-mpi: FTBFS: tests hang or explicitly fail
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
816305: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=816305
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: armci-mpi
Version: 0.0~git20160222-1
Severity: important
Justification: fails to build from source

Hi, Michael.

armci-mpi's test suite has failed on some architectures, as detailed at
https://buildd.debian.org/status/logs.php?pkg=armci-mpi&ver=0.0~git20160222-1

So far:
- On i386, armci-perf apparently hung (still running after 2.5 h.)
- On kfreebsd-i386, strided-bench likewise apparently hung.
- On mipsel, ping-pong likewise apparently hung.
- On powerpc, test_mpi_dim apparently hung, and almost all preceding
  tests failed.  (Only test_groups and test_group_split succeeded.)

Could you please take a look?

Thanks!
--- End Message ---
--- Begin Message ---
Source: armci-mpi
Source-Version: 0.0~git20160222-2

We believe that the bug you reported is fixed in the latest version of
armci-mpi, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 816...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Graham Inggs  (supplier of updated armci-mpi package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Format: 1.8
Date: Sun, 12 Mar 2017 22:03:20 +0200
Source: armci-mpi
Binary: libarmci-mpi-dev
Architecture: source
Version: 0.0~git20160222-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Graham Inggs 
Description:
 libarmci-mpi-dev - ARMCI-MPI (Development version)
Closes: 816305 857140
Changes:
 armci-mpi (0.0~git20160222-2) unstable; urgency=medium
 .
   * Team upload
   * Set ARMCI_USE_WIN_ALLOCATE=1 to fix test failures on 32-bit buildds
 (Closes: #816305)
   * Improve libarmci-mpi-dev package description (Closes: #857140)
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Bug#857140: marked as done (libarmci-mpi-dev: Package description should be improved)

2017-03-12 Thread Debian Bug Tracking System
Your message dated Sun, 12 Mar 2017 20:48:44 +
with message-id 
and subject line Bug#857140: fixed in armci-mpi 0.0~git20160222-2
has caused the Debian Bug report #857140,
regarding libarmci-mpi-dev: Package description should be improved
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
857140: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857140
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libarmci-mpi-dev
Version: 0.0~git20160222-1
Severity: minor

Description-en: ARMCI-MPI (Development version)
 ARMCI-MPI is a completely rewritten implementation of the ARMCI one-sided
 communication interface that uses MPI RMA for one-sided communication.
 .
 This version contains the Fortran90 modules and the static library.


It would be good if the description would also contain a sentence
explaining to the average Debian admin what ARMCI is.
--- End Message ---
--- Begin Message ---
Source: armci-mpi
Source-Version: 0.0~git20160222-2

We believe that the bug you reported is fixed in the latest version of
armci-mpi, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 857...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Graham Inggs  (supplier of updated armci-mpi package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Hash: SHA512

Format: 1.8
Date: Sun, 12 Mar 2017 22:03:20 +0200
Source: armci-mpi
Binary: libarmci-mpi-dev
Architecture: source
Version: 0.0~git20160222-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Graham Inggs 
Description:
 libarmci-mpi-dev - ARMCI-MPI (Development version)
Closes: 816305 857140
Changes:
 armci-mpi (0.0~git20160222-2) unstable; urgency=medium
 .
   * Team upload
   * Set ARMCI_USE_WIN_ALLOCATE=1 to fix test failures on 32-bit buildds
 (Closes: #816305)
   * Improve libarmci-mpi-dev package description (Closes: #857140)
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Processed (with 1 error): reassigned to python-qtawesome

2017-03-14 Thread Debian Bug Tracking System
Processing control commands:

> reassign -1 src:python-qtawesome
Bug #844601 [python-spyder] python-spyder: "from spyder.plugins.editor import 
Editor" hangs the machine
Bug reassigned from package 'python-spyder' to 'src:python-qtawesome'.
No longer marked as found in versions spyder/3.0.1+dfsg1-1.
Ignoring request to alter fixed versions of bug #844601 to the same values 
previously set
> fixed -1 src:python-qtawesome/0.4.4
Unknown command or malformed arguments to command.

> affects -1 src:spyder
Bug #844601 [src:python-qtawesome] python-spyder: "from spyder.plugins.editor 
import Editor" hangs the machine
Added indication that 844601 affects src:spyder

-- 
844601: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=844601
Debian Bug Tracking System
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Processed: Re: Broken library symlink detected in libptscotch-dev

2017-03-14 Thread Debian Bug Tracking System
Processing control commands:

> severity -1 serious
Bug #715107 [libptscotch-dev] Broken library symlink detected in libptscotch-dev
Severity set to 'serious' from 'normal'
> reassign -1 libptscotch-5.1 5.1.12b.dfsg-2
Bug #715107 [libptscotch-dev] Broken library symlink detected in libptscotch-dev
Bug reassigned from package 'libptscotch-dev' to 'libptscotch-5.1'.
No longer marked as found in versions scotch/5.1.12b.dfsg-2.
Ignoring request to alter fixed versions of bug #715107 to the same values 
previously set
Bug #715107 [libptscotch-5.1] Broken library symlink detected in libptscotch-dev
Marked as found in versions scotch/5.1.12b.dfsg-2.
> retitle -1 libptscotch-5.1: ships libs in /usr/lib/scotch_*/ instead of 
> /usr/lib/scotch-*/
Bug #715107 [libptscotch-5.1] Broken library symlink detected in libptscotch-dev
Changed Bug title to 'libptscotch-5.1: ships libs in /usr/lib/scotch_*/ instead 
of /usr/lib/scotch-*/' from 'Broken library symlink detected in 
libptscotch-dev'.

-- 
715107: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=715107
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Bug#857533: marked as done (python-vtk6: broken symlink: /usr/lib//python2.7/site-packages/vtk -> ../../../python2.7/dist/packages/vtk)

2017-03-14 Thread Debian Bug Tracking System
Your message dated Tue, 14 Mar 2017 20:51:28 +
with message-id 
and subject line Bug#857533: fixed in vtk6 6.3.0+dfsg1-4
has caused the Debian Bug report #857533,
regarding python-vtk6: broken symlink: 
/usr/lib//python2.7/site-packages/vtk -> 
../../../python2.7/dist/packages/vtk
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
857533: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857533
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: python-vtk6
Version: 6.3.0+dfsg1-3
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package ships (or creates)
a broken symlink.

>From the attached log (scroll to the bottom...):

13m29.4s ERROR: FAIL: Broken symlinks:
  /usr/lib/x86_64-linux-gnu/python2.7/site-packages/vtk -> 
../../../python2.7/dist/packages/vtk

  ^

You probably wanted to target .../python2.7/dist-packages/vtk
^

Severity serious, since I assume that this may break the python
stuff in subtle ways.


cheers,

Andreas
--- End Message ---
--- Begin Message ---
Source: vtk6
Source-Version: 6.3.0+dfsg1-4

We believe that the bug you reported is fixed in the latest version of
vtk6, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 857...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Anton Gladky  (supplier of updated vtk6 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Tue, 14 Mar 2017 21:34:10 +0100
Source: vtk6
Binary: libvtk6-dev libvtk6-qt-dev libvtk6.3 libvtk6.3-qt libvtk6-jni 
libvtk6-java python-vtk6 tcl-vtk6 vtk6 vtk6-doc vtk6-examples
Architecture: source
Version: 6.3.0+dfsg1-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Anton Gladky 
Description:
 libvtk6-dev - VTK header files
 libvtk6-java - Visualization Toolkit - A high level 3D visualization library - 
j
 libvtk6-jni - Visualization Toolkit - A high level 3D visualization library - j
 libvtk6-qt-dev - VTK header files, containing Qt files
 libvtk6.3  - VTK libraries
 libvtk6.3-qt - VTK libraries, Qt files
 python-vtk6 - Python bindings for VTK
 tcl-vtk6   - Tcl bindings for VTK
 vtk6   - Binaries for VTK6
 vtk6-doc   - VTK class reference documentation
 vtk6-examples - VTK examples
Closes: 857533
Changes:
 vtk6 (6.3.0+dfsg1-4) unstable; urgency=medium
 .
   * [9a28dbe] Fix symlink onto vtk. (Closes: #857533).
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vtk6_6.3.0+dfsg1-4_source.buildinfo

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Processed: Re: Bug#857510: wand-doc, sphinx: broken symlink: /usr/share/doc/wand-doc/html/_static/websupport.js -> ../../../../javascript/sphinxdoc/1.0/websupport.js

2017-03-15 Thread Debian Bug Tracking System
Processing control commands:

> clone -1 -2
Bug #857510 [wand-doc] wand-doc, sphinx: broken symlink: 
/usr/share/doc/wand-doc/html/_static/websupport.js -> 
../../../../javascript/sphinxdoc/1.0/websupport.js
Bug 857510 cloned as bug 857816
> reassign -2 fityk 1.3.0-1
Bug #857816 [wand-doc] wand-doc, sphinx: broken symlink: 
/usr/share/doc/wand-doc/html/_static/websupport.js -> 
../../../../javascript/sphinxdoc/1.0/websupport.js
Bug reassigned from package 'wand-doc' to 'fityk'.
No longer marked as found in versions wand/0.4.4-1.1.
Ignoring request to alter fixed versions of bug #857816 to the same values 
previously set
Bug #857816 [fityk] wand-doc, sphinx: broken symlink: 
/usr/share/doc/wand-doc/html/_static/websupport.js -> 
../../../../javascript/sphinxdoc/1.0/websupport.js
Marked as found in versions fityk/1.3.0-1.
> tag -2 - patch
Bug #857816 [fityk] wand-doc, sphinx: broken symlink: 
/usr/share/doc/wand-doc/html/_static/websupport.js -> 
../../../../javascript/sphinxdoc/1.0/websupport.js
Removed tag(s) patch.
> retitle -2 fityk: broken symlink: /usr/share/fityk/html/_static/websupport.js 
> -> ../../../javascript/sphinxdoc/1.0/websupport.js
Bug #857816 [fityk] wand-doc, sphinx: broken symlink: 
/usr/share/doc/wand-doc/html/_static/websupport.js -> 
../../../../javascript/sphinxdoc/1.0/websupport.js
Changed Bug title to 'fityk: broken symlink: 
/usr/share/fityk/html/_static/websupport.js -> 
../../../javascript/sphinxdoc/1.0/websupport.js' from 'wand-doc, sphinx: broken 
symlink: /usr/share/doc/wand-doc/html/_static/websupport.js -> 
../../../../javascript/sphinxdoc/1.0/websupport.js'.

-- 
857510: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857510
857816: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857816
Debian Bug Tracking System
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Processed: Re: Bug#857816: fityk: broken symlink: /usr/share/fityk/html/_static/websupport.js -> ../../../javascript/sphinxdoc/1.0/websupport.js

2017-03-15 Thread Debian Bug Tracking System
Processing control commands:

> affects 857510 - fityk
Bug #857510 [wand-doc] wand-doc, sphinx: broken symlink: 
/usr/share/doc/wand-doc/html/_static/websupport.js -> 
../../../../javascript/sphinxdoc/1.0/websupport.js
Removed indication that 857510 affects fityk
> tags -1 + patch
Bug #857816 [fityk] fityk: broken symlink: 
/usr/share/fityk/html/_static/websupport.js -> 
../../../javascript/sphinxdoc/1.0/websupport.js
Added tag(s) patch.

-- 
857510: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857510
857816: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857816
Debian Bug Tracking System
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Processed (with 4 errors): Bug#857507: mesh generation module 'mshr' missing

2017-03-16 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> Package: python-dolfin
Limiting to bugs with field 'package' containing at least one of 'python-dolfin'
Limit currently set to 'package':'python-dolfin'

> Version: 2016.2.0-2
Unknown command or malformed arguments to command.
> Followup-For: Bug #857507
Unknown command or malformed arguments to command.
> reassign 857507 fenics
Bug #857507 [python-dolfin] mesh generation module 'mshr' missing
Bug reassigned from package 'python-dolfin' to 'fenics'.
package: "fenics"' does not match at least one of "python-dolfin"
Failed to clear fixed versions and reopen on 857507: limit failed for bugs: 
857507.

> forcemerge 851183 857507
package: "fenics"' does not match at least one of "python-dolfin"
Failed to forcibly merge 851183: limit failed for bugs: 851183.

> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
857507: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857507
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Processed: Re: mesh generation module 'mshr' missing

2017-03-16 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 857507 fenics
Bug #857507 [fenics] mesh generation module 'mshr' missing
Ignoring request to reassign bug #857507 to the same package
> forcemerge 851183 857507
Bug #851183 [fenics] fenics: Misses important 'mshr' module
Bug #851183 [fenics] fenics: Misses important 'mshr' module
There is no source info for the package 'fenics' at version '2016.2.0.1' with 
architecture ''
Unable to make a source version for version '2016.2.0.1'
Marked as found in versions dolfin/2016.2.0-2.
Bug #857507 [fenics] mesh generation module 'mshr' missing
Severity set to 'important' from 'normal'
There is no source info for the package 'fenics' at version '2016.2.0.1' with 
architecture ''
Unable to make a source version for version '2016.2.0.1'
Marked as found in versions 2016.2.0.1.
Merged 851183 857507
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
851183: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=851183
857507: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857507
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Bug#854926: marked as done (sagemath: useless (Build-)Depends: on python-zodb)

2017-03-16 Thread Debian Bug Tracking System
Your message dated Fri, 17 Mar 2017 04:12:12 +
with message-id 
and subject line Bug#854926: fixed in sagemath 7.5.1-1
has caused the Debian Bug report #854926,
regarding sagemath: useless (Build-)Depends: on python-zodb
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
854926: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=854926
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: sagemath
Severity: normal

$ grep -ri zodb
debian/control.runtime-depends: python-zodb,
debian/control: python-zodb,
debian/control: python-zodb,
sage/src/doc/en/reference/databases/index.rst:Sage includes the ZOPE object 
oriented database ZODB, which
sage/build/pkgs/conway_polynomials/SPKG.txt: * #12205: Rewrite database to not 
use ZODB

The last line says everything. (And the upstream documentation should stop 
referring to it.)

(I don't use sagemath and that's the only dep I have checked)

The long story is that I was surprised to see the popcon stat of python-zodb 
increasing so much recently. Which would be nice if it was for a good reason 
(after reading https://trac.sagemath.org/ticket/10353 I think that upstream 
underestimates ZODB but well, maybe there are other DB that fit better for 
their use). Graph of both sagemath and python-zodb:
  
https://qa.debian.org/popcon-graph.php?packages=sagemath+python-zodb&show_installed=on&want_legend=on&want_ticks=on&from_date=2016-11-01&to_date=&hlght_date=&date_fmt=%25Y-%25m&beenhere=1

In any case, I'll have to care about reverse dependencies. There will be major 
updates of ZODB this year.


Julien
--- End Message ---
--- Begin Message ---
Source: sagemath
Source-Version: 7.5.1-1

We believe that the bug you reported is fixed in the latest version of
sagemath, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 854...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Tobias Hansen  (supplier of updated sagemath package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Fri, 17 Mar 2017 00:17:32 +
Source: sagemath
Binary: sagemath sagemath-common sagemath-jupyter sagemath-doc-ca 
sagemath-doc-de sagemath-doc-en sagemath-doc-es sagemath-doc-fr sagemath-doc-hu 
sagemath-doc-it sagemath-doc-ja sagemath-doc-pt sagemath-doc-ru sagemath-doc-tr
Architecture: source
Version: 7.5.1-1
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Tobias Hansen 
Description:
 sagemath   - Open Source Mathematical Software
 sagemath-common - Open Source Mathematical Software - architecture-independent 
file
 sagemath-doc-ca - Open Source Mathematical Software - documentation (Catalan; 
Valen
 sagemath-doc-de - Open Source Mathematical Software - documentation (German)
 sagemath-doc-en - Open Source Mathematical Software - documentation (English)
 sagemath-doc-es - Open Source Mathematical Software - documentation (Spanish; 
Casti
 sagemath-doc-fr - Open Source Mathematical Software - documentation (French)
 sagemath-doc-hu - Open Source Mathematical Software - documentation (Hungarian)
 sagemath-doc-it - Open Source Mathematical Software - documentation (Italian)
 sagemath-doc-ja - Open Source Mathematical Software - documentation (Japanese)
 sagemath-doc-pt - Open Source Mathematical Software - documentation 
(Portuguese)
 sagemath-doc-ru - Open Source Mathematical Software - documentation (Russian)
 sagemath-doc-tr - Open Source Mathematical Software - documentation (Turkish)
 sagemath-jupyter - Open Source Mathematical Software - Jupyter kernel
Closes: 854926
Changes:
 sagemath (7.5.1-1) experimental; urgency=medium
 .
   * New upstream version.
   * Remove useless dependency on python-zodb. (Closes: #854926)
   * New (Build-)Depends:
 - libjs-three (>= 80)
 - singular (>= 1:4.1.0-p2)
 - pynac (>= 0.7.5)
 - giac
   * Remove patches (applied upstream):
 - u0-version-cython-0.25.patch
 - u0-version-glpk-4.60.patch
 - u0-version-pari-2.9-trac-21765.patch
 - u0-version-singular-4.patch
 - u0-distutils-fixes.patch
 - u0-timeit-python-2.7.11.patch
 - 

Processed: Re: libptscotch-5.1: ships libs in /usr/lib/scotch_*/ instead of /usr/lib/scotch-*/

2017-03-17 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 patch pending
Bug #715107 [libptscotch-5.1] libptscotch-5.1: ships libs in /usr/lib/scotch_*/ 
instead of /usr/lib/scotch-*/
Added tag(s) pending and patch.

-- 
715107: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=715107
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Bug#855873: marked as done (spyder3: broken code completion with Jedi 0.10)

2017-03-18 Thread Debian Bug Tracking System
Your message dated Sat, 18 Mar 2017 11:35:52 +
with message-id 
and subject line Bug#855873: fixed in spyder 3.1.3+dfsg1-2
has caused the Debian Bug report #855873,
regarding spyder3: broken code completion with Jedi 0.10
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
855873: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855873
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: spyder3
Version: 3.1.2+dfsg1-1
Severity: important
Tags: upstream regression

The version of spyder currently packaged for Stretch is affected by a
regression in the code completion feature of the editor, due to our
upgrade to Jedi version 0.10.

I am marking this bug as important since code completion used to work in
the packaged version for Jessie, so users are likely to notice the
regression when upgrading from Jessie to Stretch.

There is a fix upstream pending merge approval. I have cherry-picked it
locally on top of the package in experimental (3.1.3+dfsg1-1) and code
completion is now working again.

Ghis


-- System Information:
Debian Release: 9.0
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.9.0-2-amd64 (SMP w/8 CPU cores)
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages spyder3 depends on:
ii  python3-spyder  3.1.3+dfsg1-2
pn  python3:any 

spyder3 recommends no packages.

spyder3 suggests no packages.

Versions of packages python3-spyder depends on:
ii  libjs-jquery 3.1.1-2
ii  libjs-mathjax2.7.0-1
ii  pep8 1.7.0-4
ii  pylint   1.6.5-1
ii  python3-bs4  4.5.3-1
ii  python3-chardet  2.3.0-2
ii  python3-jedi 0.10.0~git1+f05c071-1
ii  python3-nbconvert4.2.0-4
ii  python3-numpydoc 0.6.0+ds1-1
ii  python3-pep8 1.7.0-4
ii  python3-pickleshare  0.7.4-1
ii  python3-psutil   5.0.1-1
ii  python3-pyflakes 1.3.0-1
ii  python3-pygments 2.2.0+dfsg-1
ii  python3-qtawesome0.4.3-1
ii  python3-qtconsole4.2.1-3
ii  python3-qtpy 1.2.1-1
ii  python3-sphinx   1.4.9-2
ii  python3-zmq  16.0.2-2
pn  python3:any  
ii  spyder-common3.1.3+dfsg1-2

Versions of packages python3-spyder recommends:
ii  python3-matplotlib  2.0.0+dfsg1-2
ii  python3-numpy   1:1.12.0-2
ii  python3-pandas  0.19.2-5
ii  python3-scipy   0.18.1-2
ii  spyder-doc  3.1.3+dfsg1-2

Versions of packages python3-spyder suggests:
ii  gitk1:2.11.0-2
pn  tortoisehg  

Versions of packages python3-pyqt5 depends on:
ii  libc62.24-9
ii  libgcc1  1:6.3.0-7
ii  libpython3.5 3.5.3-1
ii  libqt5core5a [qtbase-abi-5-7-1]  5.7.1+dfsg-3+b1
ii  libqt5dbus5  5.7.1+dfsg-3+b1
ii  libqt5designer5  5.7.1-1
ii  libqt5gui5   5.7.1+dfsg-3+b1
ii  libqt5help5  5.7.1-1
ii  libqt5network5   5.7.1+dfsg-3+b1
ii  libqt5printsupport5  5.7.1+dfsg-3+b1
ii  libqt5test5  5.7.1+dfsg-3+b1
ii  libqt5widgets5   5.7.1+dfsg-3+b1
ii  libqt5xml5   5.7.1+dfsg-3+b1
ii  libstdc++6   6.3.0-7
ii  python3  3.5.3-1
ii  python3-sip [sip-py3api-11.3]4.18.1+dfsg-1
pn  python3:any  

Versions of packages python3-pyqt5 suggests:
pn  python3-pyqt5-dbg  

-- no debconf information
--- End Message ---
--- Begin Message ---
Source: spyder
Source-Version: 3.1.3+dfsg1-2

We believe that the bug you reported is fixed in the latest version of
spyder, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 855...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ghislain Antony Vaillant  (supplier of updated spyder 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 16 Mar 2017 09:40:32 +
Source: spyder
Binary: spyder python-spyderlib python-spyder python-spyd

Bug#857692: marked as done (petsc: FTBFS in !linux)

2017-03-18 Thread Debian Bug Tracking System
Your message dated Sun, 19 Mar 2017 00:18:14 +0100
with message-id <20170318231812.5v6frzt4dnw7y...@mapreri.org>
and subject line Re: Bug#857692: petsc: FTBFS in !linux
has caused the Debian Bug report #857692,
regarding petsc: FTBFS in !linux
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
857692: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857692
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: petsc
Version: 3.7.5+dfsg1-4
Severity: important

petsc fails to build in hurd-i386, kfreebsd-i386 and kfreebsd-amd64.
https://buildd.debian.org/status/package.php?p=petsc

This is particularly interesting as petsc is the last package in the
archive depending on gcc-5, only in those architecture.

-- 
regards,
Mattia Rizzolo

GPG Key: 66AE 2B4A FCCF 3F52 DA18  4D18 4B04 3FCD B944 4540  .''`.
more about me:  https://mapreri.org : :'  :
Launchpad user: https://launchpad.net/~mapreri  `. `'`
Debian QA page: https://qa.debian.org/developer.php?login=mattia  `-


signature.asc
Description: PGP signature
--- End Message ---
--- Begin Message ---
On Sat, Mar 18, 2017 at 06:11:11PM +0800, Drew Parsons wrote:
> Looks like kfreebsd is just another PIE victim. Seems to build now just
> as well as it was before.  I've requested a give-back.

oh, nice.
I poked for that g-b on IRC and it now built in kbsd too.

cool, thank you (and sorry for bothering, I did not realize a g-b was
enough).

-- 
regards,
Mattia Rizzolo

GPG Key: 66AE 2B4A FCCF 3F52 DA18  4D18 4B04 3FCD B944 4540  .''`.
more about me:  https://mapreri.org : :'  :
Launchpad user: https://launchpad.net/~mapreri  `. `'`
Debian QA page: https://qa.debian.org/developer.php?login=mattia  `-


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Bug#857310: marked as done (sdpb FTBFS: *** stack smashing detected ***: ./sdpb terminated)

2017-03-18 Thread Debian Bug Tracking System
Your message dated Sun, 19 Mar 2017 00:50:03 +
with message-id 
and subject line Bug#857310: fixed in sdpb 1.0-2
has caused the Debian Bug report #857310,
regarding sdpb FTBFS: *** stack smashing detected ***: ./sdpb terminated
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
857310: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857310
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: sdpb
Version: 1.0-1
Severity: serious

https://buildd.debian.org/status/package.php?p=sdpb&suite=sid

...
make[1]: Leaving directory '/«PKGBUILDDIR»'
   dh_auto_test -a
make -j6 test
make[1]: Entering directory '/«PKGBUILDDIR»'
./sdpb -s test.xml --noFinalCheckpoint
SDPB started at 2017-Mar-09 19:16:03
SDP file: "test.xml"
out file: "test.out"
checkpoint file : "test.ck"

Parameters:
maxIterations= 500
maxRuntime   = 86400
checkpointInterval   = 3600
noFinalCheckpoint= true
findPrimalFeasible   = false
findDualFeasible = false
detectPrimalFeasibleJump = false
detectDualFeasibleJump   = false
precision(actual)= 400(448)
maxThreads(using)= 4(4)
dualityGapThreshold  = 1e-30
primalErrorThreshold = 1e-30
dualErrorThreshold   = 1e-30
initialMatrixScalePrimal = 1
initialMatrixScaleDual   = 1
feasibleCenteringParameter   = 0.1
infeasibleCenteringParameter = 0.3
stepLengthReduction  = 0.7
choleskyStabilizeThreshold   = 1e-40
maxComplementarity   = 1e+100

*** stack smashing detected ***: ./sdpb terminated
Makefile:89: recipe for target 'test' failed
make[1]: *** [test] Aborted
--- End Message ---
--- Begin Message ---
Source: sdpb
Source-Version: 1.0-2

We believe that the bug you reported is fixed in the latest version of
sdpb, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 857...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Tobias Hansen  (supplier of updated sdpb package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 19 Mar 2017 00:06:27 +
Source: sdpb
Binary: sdpb sdpb-doc
Architecture: source amd64 all
Version: 1.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Tobias Hansen 
Description:
 sdpb   - Semidefinite program solver
 sdpb-doc   - Semidefinite program solver (documentation)
Closes: 857310
Changes:
 sdpb (1.0-2) unstable; urgency=medium
 .
   * Add patch use-system-tinyxml2.h.patch. (Closes: #857310)
   * Use boost 1.63 instead of 1.62.
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 9478d43e5539076bac3e9b4b3f

Bug#727899: marked as done (hyantesite: run dh-autoreconf to update config.{sub,guess} and {libtool,aclocal}.m4)

2017-03-22 Thread Debian Bug Tracking System
Your message dated Wed, 22 Mar 2017 12:50:11 +
with message-id 
and subject line Bug#727899: fixed in hyantesite 1.3.0-1.1
has caused the Debian Bug report #727899,
regarding hyantesite: run dh-autoreconf to update config.{sub,guess} and 
{libtool,aclocal}.m4
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
727899: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=727899
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:hyantesite
Version: 1.3.0-1
Severity: normal
User: debian-...@lists.debian.org
Usertags: arm64

The package fails to build on arm64 (aarch64-linux-gnu), because the
config.{guess,sub} files are out of date, and are not updated during
the build.  If possible, please do not update these files directly,
but build-depend on autotools-dev instead, and use the tools provided
by autotools-dev to update these files.

  - For dh, call dh --with autotools_dev (yes, underscore).

  - For other rules files, call dh_autotools-dev_updateconfig before
calling configure (in the build or configure target), and call
dh_autotools-dev_restoreconfig before calling dh_clean in the clean
target.

For combining autoreconf and autotools_dev, see bug #698765.

After the build on any architecture, and before a clean, a grep for
aarch64 in the config.sub file(s) should print some lines.

The full build log can be found at:
http://people.debian.org/~doko/logs/arm64-20131027/buildlog_ubuntu-trusty-arm64.hyantesite_1.3.0-1_FAILEDTOBUILD.txt
The last lines of the build log are at the end of this report.

Please note that these build were done in an Ubuntu development,
environment there may be a few false positives in these bug reports.

[...]
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... no
checking whether to build shared libraries... no
checking whether to build static libraries... yes
checking how to run the C preprocessor... aarch64-linux-gnu-gcc -std=gnu99 -E
checking whether aarch64-linux-gnu-gcc -std=gnu99 and cc understand -c and -o 
together... yes
checking math.h usability... yes
checking math.h presence... yes
checking for math.h... yes
checking for cos in -lm... yes
checking for ANSI C header files... (cached) yes
checking whether time.h and sys/time.h may both be included... yes
checking float.h usability... yes
checking float.h presence... yes
checking for float.h... yes
checking for stdlib.h... (cached) yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for size_t... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for doxygen... /usr/bin/doxygen
checking for help2man... /usr/bin/help2man

hyantesite Configuration:

  Version: 1.3.0


  Executables: NONE/bin
  Libraries:   NONE/lib
  Docs:/usr/share/doc/hyantesite

  Minimal deps ok? no
/bin/bash .config/config.sub aarch64-linux-gnu failed
invalid value of canonical build
/bin/bash .config/config.sub aarch64-linux-gnu failed
invalid value of canonical host


  Build doc? yes


configure: Configure failed
make: *** [config.status] Error 1
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
--- End Message ---
--- Begin Message ---
Source: hyantesite
Source-Version: 1.3.0-1.1

We believe that the bug you reported is fixed in the latest version of
hyantesite, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 727...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Adrian Bunk  (supplier of updated hyantesite package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 22 Mar 2017 14:19:13 +0200
Source: hyantesite
Binary: libhyantes-dev libhyantes0 hyantesite
Architecture: source
Version: 1.3.0-1.1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Adrian Bunk 
Description:
 hyantesite - geomatic tool to compute

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