Bug#976849: ITP: density-fitness -- Calculates per-residue electron density scores real-space R, real-space correlation coefficient, EDIAm, and OPIA

2020-12-08 Thread PICCA Frederic-Emmanuel
Hello,

We maintain a Debian blends dedicated to photo and neutron facilities 
DebianPAN[1] via a dedicated team on salsa[2]

do not hesitate to tell me in which category[2] you think density-fitness 
belongs

cheers

Frederic

[2] https://salsa.debian.org/pan-team
[1] https://salsa.debian.org/blends-team/pan
[3] https://blends.debian.org/pan/tasks/



Bug#965964: ITP: geant4 -- physics simulation toolit from CERN

2020-07-21 Thread PICCA Frederic-Emmanuel
did you started from here ?

https://salsa.debian.org/science-team/geant4

cheers

Frederic


Bug#911106:

2019-07-14 Thread PICCA Frederic-Emmanuel
Hello

did you plan to publish you work on salsa ?

regards,

Frederic


Bug#905360: closed by Bart Martens (closing ITP: spyder-kernels -- Jupyter kernels for the Spyder console)

2018-08-03 Thread PICCA Frederic-Emmanuel
Hello, sorry my email system was badly configured.

Control: owner -1 Picca Frédéric-Emmanuel 

why did you close it ?

Control: reopen -1


Hope it is ok now.

Cheers

Fred


Bug#844618: ITP: bornagain -- Simulating and fitting X-ray and neutron small-angle scattering at grazing incidence

2016-11-17 Thread PICCA Frederic-Emmanuel
Hello Mika,

VEry glade to hear that you decided to integrate bornagain into Debian.

I created a git repository for it under

ssh://git.debian.org/git/debian-science/packages/bornagain.git

do you have an alioth account, and are you already member of the debian-science 
team ?


Cheers


Frederic


Bug#768634: ITA: propellor -- property-based host configuration management in haskell

2015-07-10 Thread PICCA Frederic-Emmanuel
Hello, just to know if you are planning to update propellor in Debian


Cheers

Fred

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Bug#778417: ITP: netcdf-python -- python interface to the netCDF4 (network Common Data Form) library

2015-02-18 Thread PICCA Frederic-Emmanuel
Hello, I am the maintainer of python-scientific

 How does this differ from the existing python-netcdf package?

I CC the upstream autor of python-scientific, maybe he can clarify this point

but before a question to the netcdf4-python guyes.

Does netcdf4-python will support python3 ?

@Konrad do you think that this netcdf implementation from scientific python 
could be replace by this
netcdf4-python implementation ? Should we get rid of your implentation and use 
this one instead (to be clear)

It would be nice if at the end only one implementation could be kept and 
maintain.

Cheers

Frederic

I put here the rest of the message:

 That is not an easy question to answer (at least with my limited
 knowledge). The Unidata website
 (http://www.unidata.ucar.edu/software/netcdf/software.html#Python) lists
 8 different python interfaces to NetCDF. Some are faster, and some offer
 writing in reading  writing in other data formats as well as NetCDF.

 The netcdf4-python package is the only one described as having
 implemented most of the newest features of NetCDF-4. It was actually
 modelled on the Scientific.IO.NetCDF module API.

 The information about the ScientificPython source package which bundles
 python-netcdf (along with many other modules useful for scientific
 work), does not contain much easy to digest information about the
 implemented interface. I did see in the changelog however, that it is at
 least aware of NetCDF-4 data.

 Basically, our intention was to package all of the netcdf-* packages
 under the Unidata banner on github (https://github.com/Unidata).

Regards,

Ross


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Bug#760188: ITP: scoop -- concurrent parallel programmming library

2014-09-08 Thread PICCA Frederic-Emmanuel
Hello,

during the build, I have this message

writing output... [ 50%] examples
WARNING: LaTeX command 'latex' cannot be run (needed for math display), check 
the pngmath_latex setting
writing output... [ 66%] index


maybe it would be nice to install latex to generate the pngmath pictures.


Cheers


I just did a minor fix to the copyright. it seems to me that it is ok now.

Fred

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Bug#760188: ITP: scoop -- concurrent parallel programmming library

2014-09-04 Thread PICCA Frederic-Emmanuel
Hello

  what about _static/copybutton.js ?

 Can't find anything special on this (among other packages only to be
 found in python{2.7,3.2}-doc [1]), so I suggest we just leave it out
 (contains no copyright info, whatsoever)

look at here and add the same thing in the copyright file.

http://sources.debian.net/src/python-numpy/1:1.8.2-2/debian/copyright/

 Added _template/globaltoc.html to deb/copyright, contains a copyright
 header.

I can not find it in the current git repo 20:17 UTC+1

 dictconfig.py: added that to deb/copyright, the old Python license is
 researched.

this file is an old copy of a file which is part of python-logutils.
It seems that the license is BSD-3 on the new vesion. but the version of scoop 
is older.

http://sources.debian.net/src/python-logutils/0.3.3-2/logutils/

maybe the upstream should use this package instead of embeding this copy... 
except if they have done some modifications.
Maybe they should use the latest version.

 runpy.py: no copyright and no date are given. I've researched the year
 and added the source for the info. Can't tell if this entry is
 problematic, but cme-check doesn't complain.

can you ask the upstream where he took this file.

the problem is not cme-check but to do our best to simplify the load of the 
ftp-master team

If you need to find files do not hesitate to use

codesearch.debian.net (this is a fantastic service for copyright digging :)

 Further comments welcome.

here it is :)

 Setup for autopkgtest is coming up.

I cannot wait :)

cheers

Frederic

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Bug#760188: ITP: scoop -- concurrent parallel programmming library

2014-09-03 Thread PICCA Frederic-Emmanuel
Hello, here a quick review of all the patches

* dropped docs package (REJECT-FAQ: split this only if it's big)
  I think that this patch should be reverted.
  The problem if you add the documentation in python-scoop seems to me 
problematic when python3-scoop will come.
  It is best to my opinion especially for the python pacakging to put the 
documentation nto a dedicated package which can be recommended by python2 and 
python3.
  I do not think that this -doc package would be rejected by ftp-master. There 
argument is understandable when you have only one binary pacakge.
But here we can intall python2 and/or python3 version but in both cases you 
want the documentation.


* finalized
  ok, do not hesitate to use cme to fix your control file.

* changelog: restored 'initial release' and added info on previous package

  is there common binary packages between this old scoop package and the new 
one ?

* build docs package
  ok

* running testsuite
  nice to have a test suite. You can look at the debci and autopkgtest 
infrastructure to implement also the integration continuous integration for 
scoop.

* changelog: improved package info
* copyright: indent correction

ok

* control: corrected dependency, copyright: shortened too long line

why did you removed the virtual package ssh-client ?

* added no-adsense.patch
  could you discuss with the upstream to remove these privacy breach things.
  If they really want them, it should be nice to have a setup.py flag which 
allow to get rid of these google analytic links, instead of carrying a 
dedicated patch all the time.

* updated some files in deb/, removed source/local-options and egg-info, added 
examples and doc-base

  You removed the local-options (are you using gbp-buildpackage to build scoop 
?)

So I will consiede the pacakge ready for upload once

 1) you regenerate the -doc package (this will simplify thinks when python3 
pacakge will be possible)
 2) re-add the ssh-client  dependency (cheap)
 3) add the autopkgtest part (will simplify a lot the maintenance of the 
package, so important for me)


I need to build it and do the copyright check.

then I think that it will be ok for me to sponsor the upload.

Cheers

Frederic


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Bug#760188: ITP: scoop -- concurrent parallel programmming library

2014-09-03 Thread PICCA Frederic-Emmanuel
scoop-doc would be. But I would be tending to python-scoop-doc anyway.

scoop-doc is better to my opinion
I just looked at sphinx and it seems that this is better to use
source-doc (it is neutral

 By-the-way: what's your opinion for the dep of the docs package on the
 main package, Suggests or Recommends?

Recommends


Cheers

Fred

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Bug#760188: ITP: scoop -- concurrent parallel programmming library

2014-09-03 Thread PICCA Frederic-Emmanuel
copyright review

I used licensecheck as a starting point

can you look with the upstream to add copyright headers where it is missing 
UNKOWN
and it would be nice to have also the copyright in each header.
it seems thaht there is only the license without the copyright statement.

this is not a blocker but it is good practive and this way no ambiguity.

This way your next license check will be easyer.


/tmp/scoop-0.7.1$ licensecheck -r *
doc/conf.py: *No copyright* GENERATED FILE
examples/map_doc.py: *No copyright* LGPL (v3 or later)
examples/recurse.py: *No copyright* LGPL (v3 or later)
examples/url_fetch.py: *No copyright* LGPL (v3 or later)
examples/lambda.py: *No copyright* LGPL (v3 or later)
examples/object.py: *No copyright* LGPL (v3 or later)
examples/full_tree.py: *No copyright* LGPL (v3 or later)
examples/grtest.py: *No copyright* UNKNOWN
examples/callback.py: *No copyright* LGPL (v3 or later)
examples/url_fetch_doc.py: *No copyright* LGPL (v3 or later)
examples/map_scan.py: *No copyright* LGPL (v3 or later)
examples/deap_ga_evosn.py: *No copyright* LGPL (v3 or later)
examples/testmut.py: *No copyright* LGPL (v3 or later)
examples/deap_ga_onemax.py: *No copyright* LGPL (v3 or later)
examples/sum_multiples.py: *No copyright* LGPL (v3 or later)
examples/shared_example_doc.py: *No copyright* LGPL (v3 or later)
examples/pi_calc_doc.py: *No copyright* LGPL (v3 or later)
examples/conditional_import.py: *No copyright* LGPL (v3 or later)
examples/conditional_execution.py: *No copyright* LGPL (v3 or later)
examples/shared_example.py: *No copyright* LGPL (v3 or later)
examples/sorting.py: *No copyright* LGPL (v3 or later)
examples/dependency/sortingnetwork.py: *No copyright* LGPL (v3 or later)
examples/map_reduce.py: *No copyright* LGPL (v3 or later)
examples/tree/Tree.py: *No copyright* UNKNOWN
examples/tree/dtm-tree.py: *No copyright* UNKNOWN
examples/tree/TreeGen.py: *No copyright* UNKNOWN
examples/tree/scoop_tree.py: *No copyright* UNKNOWN
examples/tree/serial-tree.py: *No copyright* UNKNOWN
examples/pi_calc.py: *No copyright* LGPL (v3 or later)
examples/rssDoc.py: *No copyright* LGPL (v3 or later) GENERATED FILE
examples/map_as_completed.py: *No copyright* LGPL (v3 or later)
examples/interactive_shell.py: *No copyright* UNKNOWN
examples/image_resize.py: *No copyright* LGPL (v3 or later)
examples/tree_traversal.py: *No copyright* LGPL (v3 or later)
examples/exceptExample.py: *No copyright* LGPL (v3 or later)
scoop/fallbacks.py: *No copyright* LGPL (v3 or later)
scoop/__init__.py: *No copyright* LGPL (v3 or later)
scoop/encapsulation.py: *No copyright* LGPL (v3 or later)
scoop/_comm/__init__.py: *No copyright* LGPL (v3 or later)
scoop/_comm/scoopzmq.py: *No copyright* LGPL (v3 or later)
scoop/_comm/scooptcp.py: *No copyright* LGPL (v3 or later)
scoop/_comm/scoopexceptions.py: *No copyright* LGPL (v3 or later)
scoop/backports/newCollections.py: *No copyright* LGPL (v3 or later)
scoop/backports/dictconfig.py: UNKNOWN
scoop/backports/runpy.py: *No copyright* UNKNOWN
scoop/launcher.py: *No copyright* LGPL (v3 or later)
scoop/utils.py: *No copyright* LGPL (v3 or later)
scoop/_control.py: *No copyright* LGPL (v3 or later)
scoop/discovery/minusconf.py: *No copyright* UNKNOWN
scoop/discovery/__init__.py: *No copyright* LGPL (v3 or later)
scoop/launch/__init__.py: *No copyright* LGPL (v3 or later)
scoop/launch/workerLaunch.py: *No copyright* LGPL (v3 or later)
scoop/launch/brokerLaunch.py: *No copyright* LGPL (v3 or later)
scoop/_debug.py: *No copyright* LGPL (v3 or later)
scoop/broker/brokertcp.py: *No copyright* LGPL (v3 or later)
scoop/broker/structs.py: *No copyright* LGPL (v3 or later)
scoop/broker/brokerzmq.py: *No copyright* LGPL (v3 or later)
scoop/broker/__main__.py: *No copyright* LGPL (v3 or later)
scoop/shared.py: *No copyright* LGPL (v3 or later)
scoop/bootstrap/__main__.py: *No copyright* LGPL (v3 or later)
scoop/_types.py: *No copyright* LGPL (v3 or later)
scoop/__main__.py: *No copyright* LGPL (v3 or later)
scoop/futures.py: *No copyright* LGPL (v3 or later)
setup.py: *No copyright* UNKNOWN
test/tests_stopwatch.py: *No copyright* UNKNOWN
test/tests_stat.py: *No copyright* UNKNOWN
test/tests.py: *No copyright* LGPL (v3 or later)
test/tests_parser.py: *No copyright* UNKNOWN


now

the sourc epacakge contain already build documentation.
for exemple the 
doc/_static directory contain .js code which is part of sphinx, you should 
indicate this in the copyright file.
Or better ask the upstream to remove this prebuild documentation.
what about _static/copybutton.js ?

* doc/blu.diff ??? this should be removed from the source package.

* doc/_template/* sphinx ?

* doc/_themes/* ???

it sems thah some files hase the DEAP license header. This should be fixed by 
the upstream or indicated in the copyright file.

picca@ORD03037:/tmp/scoop-0.7.1$ rgrep DEAP *
examples/deap_ga_onemax.py:raise Exception(This test needs DEAP to be 
installed.)
examples/dependency/sortingnetwork.py:#This file is part of 

Bug#760188: ITP: scoop -- concurrent parallel programmming library

2014-09-03 Thread PICCA Frederic-Emmanuel
You removed the local-options (are you using gbp-buildpackage to build 
 scoop ?)

 Yes. What's this for, useful to keep?

In fact I like when the master branch does not touch the upstream sources.
This is why I use the unapply patches option
this way I have the original sources in the master branch.

But this is only me.
You do exactly what you want :).

 Great. Much thanks in advance.

Once the copyright and autopackage part will be ready :)

I know this copyright part is painfull but it is mendatory.

thanks

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Bug#760188: ITP: scoop -- concurrent parallel programmming library

2014-09-01 Thread PICCA Frederic-Emmanuel
Hello, I already started to package it, but I did not intend to maintain it.
 I can sponsorize the upload if you need a sponsor.

Did you considede maintaining it under the debian-science umbrella.
I know that it is related to deap, so it is science related :).

Here the debian-science git repository of my latest package just in case.

git://anonscm.debian.org/debian-science/packages/guidata.git

tell me if you are interested.

cheers

Frederic

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Bug#760188: ITP: scoop -- concurrent parallel programmming library

2014-09-01 Thread PICCA Frederic-Emmanuel
sorry, here the right adress

git://anonscm.debian.org/debian-science/packages/scoop.git

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Bug#738928: ITA: ropemacs -- Emacs mode for Python refactoring

2014-03-15 Thread PICCA Frederic-Emmanuel
Hello,

when will you upload the new packages ?
I see that the 0.9.4 version is already in the svn ?

cheers

Frédéric

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Bug#721653: RE : Bug#721653: License of SSM

2013-09-04 Thread PICCA Frederic-Emmanuel

 No problem, but note that I'm not reviewing FTP NEW queue or are
 related to SSM authors in any way, just happen to see the ITP bug by
 chance and decided to send you a note just in case :-)


ok, so I contacted the person in charge of CCP4 and here his feedback about ssm 
license.

Hi Fred,
there are two files because GPL3 is a part of LGPL3. See the license
itself or its description somewhere at FSF website.
Additionally sections 15 and 16 of GPL3 are modified in accordance
with section 7a)
The license is LGPL3.
Marcin

Thanks for the review ;)

Cheers

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Bug#602554: ITP: guidata -- dataset manipulation GUI generator

2010-11-05 Thread Picca Frederic-Emmanuel
Package: wnpp
Severity: wishlist
Owner: Picca Frederic-Emmanuel pi...@synchrotron-soleil.fr


* Package name: guidata
  Version : 1.2.2
  Upstream Author : pierre.rayb...@cea.fr pierre.rayb...@cea.fr
* URL : http://sourceforge.net/projects/guidata/
* License : CeCILLv2
  Programming Lang: Python
  Description : dataset manipulation GUI generator

Based on the Qt Python binding module PyQt4, guidata is a Python library
generating graphical user interfaces for easy dataset editing and display.
It also provides helpers and application development tools for PyQt4.




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Bug#602555: ITP: guiqwt -- efficient 2D data-plotting library

2010-11-05 Thread Picca Frederic-Emmanuel
Package: wnpp
Severity: wishlist
Owner: Picca Frederic-Emmanuel pi...@synchrotron-soleil.fr


* Package name: guiqwt
  Version : 2.0.4
  Upstream Author : pierre.rayb...@cea.fr pierre.rayb...@cea.fr
* URL : http://sourceforge.net/projects/guiqwt/
* License : CeCILLv2
  Programming Lang: Python
  Description : efficient 2D data-plotting library

The guiqwt Python library provides efficient 2D data-plotting features
(curve/image visualization and related tools) for signal/image processing
application development and interactive computing. It's based on the
scientific modules NumPy and SciPy, and the PyQwt plotting widgets for
PyQt4 graphical user interfaces.




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Bug#569153: ITP: libhkl -- diffractometer computation control library

2010-02-10 Thread Picca Frederic-Emmanuel
Package: wnpp
Severity: wishlist
Owner: Picca Frederic-Emmanuel pi...@synchrotron-soleil.fr


* Package name: libhkl
  Version : 4.0.0
  Upstream Author : Picca Frédéric-Emmanuel  pi...@synchrotorn-soleil.fr
* URL : http://repo.or.cz/w/hkl.git
* License : (GPL)
  Programming Lang: (C)
  Description : diffractometer computation control library

 The hkl library is a framework for diffraction computation and
 diffractometer control, heavily used at the SOLEIL synchrotron. It
 supports various types of diffractometer geometry: Eulerian 4-circle,
 Eulerian 6-circle, kappa 4-circle, kappa 6-circle, and z-axis
 geometry. For each of these it provides several numerically computed
 modes, such as bisector and constant psi.



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