Re: [apache/airavata-sandbox] Jupyter Platform Dashboard (PR #59)

2022-06-26 Thread DImuthu Upeksha 
Hi Himanshu

Thanks for sending the PR. I merged your code to sandbox and it looks good.
I will gradually borrow react code into the original scigap ipython
repository [1]. I have written a java-based API for the backend instead of
flask because it is easy to implement the rest of the orchestration code
along with the API code. Moving forward, let's use this code base.

[1] https://github.com/SciGaP/iPython-Kerner-Changes
[2]
https://github.com/SciGaP/iPython-Kerner-Changes/tree/main/jupyter-platform/platform-api/src/main/java/org/apache/airavata/jupyter/api/controller
[3]
https://github.com/SciGaP/iPython-Kerner-Changes/blob/main/jupyter-platform/platform-api/src/main/java/org/apache/airavata/jupyter/core/OrchestrationEngine.java

Thanks
Dimuthu


On Sat, Jun 25, 2022 at 1:18 AM Himanshu Hansaria 
wrote:

> Added project for jupyter platform dashboard.
> --
> You can view, comment on, or merge this pull request online at:
>
>   https://github.com/apache/airavata-sandbox/pull/59
> Commit Summary
>
>- 1313430
>
> 
>First phase of development
>- d2c47de
>
> 
>Updated README and requirements.txt
>- 0ad0a70
>
> 
>Updated README
>
> File Changes
>
> (25 files )
>
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[GitHub] [airavata-sandbox] dependabot[bot] opened a new pull request, #63: Bump nanoid from 3.1.30 to 3.3.4 in /gsoc2022/jupyter-platform-dashboard

2022-06-26 Thread GitBox 


dependabot[bot] opened a new pull request, #63:
URL: https://github.com/apache/airavata-sandbox/pull/63

   Bumps [nanoid](https://github.com/ai/nanoid) from 3.1.30 to 3.3.4.
   
   Changelog
   Sourced from https://github.com/ai/nanoid/blob/main/CHANGELOG.md;>nanoid's 
changelog.
   
   3.3.4
   
   Fixed --help in CLI (by https://github.com/Lete114;>@​Lete114).
   
   3.3.3
   
   Reduced size (by Anton Khlynovskiy).
   
   3.3.2
   
   Fixed enhanced-resolve support.
   
   3.3.1
   
   Reduced package size.
   
   3.3
   
   Added size argument to function from 
customAlphabet (by Stefan Sundin).
   
   3.2
   
   Added --size and --alphabet arguments to 
binary (by Vitaly Baev).
   
   3.1.32
   
   Reduced async exports size (by Artyom Arutyunyan).
   Moved from Jest to uvu (by Vitaly Baev).
   
   3.1.31
   
   Fixed collision vulnerability on object in size (by Artyom 
Arutyunyan).
   
   
   
   
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   https://github.com/ai/nanoid/commit/fc5bd0dbba830b1e6f3e572da8e2bc9ddc1b4b44;>fc5bd0d
 Release 3.3.4 version
   https://github.com/ai/nanoid/commit/5ae2628e3b2ce10081cebc59a72f15dc4f459e0b;>5ae2628
 Update dependencies
   https://github.com/ai/nanoid/commit/2f48e9c59399fa1e9aa8693be80ad9224aaec293;>2f48e9c
 Try to fix CI
   https://github.com/ai/nanoid/commit/85991e3e2a8254c9c55b6972051560f6f446b01b;>85991e3
 fix: CLI help examples (https://github-redirect.dependabot.com/ai/nanoid/issues/361;>#361)
   https://github.com/ai/nanoid/commit/89d994cd30cac6e2cb465ea8baf3828668ad3c88;>89d994c
 Update dependencies
   https://github.com/ai/nanoid/commit/00547e79e9717e632264af4477076a4e90c23c20;>00547e7
 Fix benchmark order
   https://github.com/ai/nanoid/commit/a8f4099263b8c1befffcbf983977aa8862866915;>a8f4099
 bench: add back @​napi-rs/uuid (https://github-redirect.dependabot.com/ai/nanoid/issues/360;>#360)
   https://github.com/ai/nanoid/commit/acd897f565719ada3f6f9e509e818932afe23bdb;>acd897f
 Added postgres extension to various README files (https://github-redirect.dependabot.com/ai/nanoid/issues/359;>#359)
   https://github.com/ai/nanoid/commit/772a61307d127f58c750d360d925a75b3061f5a1;>772a613
 Update CI and dependencies
   https://github.com/ai/nanoid/commit/e7aeb0fb84efef026dd6d5c4105a08160febf205;>e7aeb0f
 Added zig-nanoid to readme. (https://github-redirect.dependabot.com/ai/nanoid/issues/357;>#357)
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[GitHub] [airavata-sandbox] dependabot[bot] opened a new pull request, #62: Bump async from 2.6.3 to 2.6.4 in /gsoc2022/jupyter-platform-dashboard

2022-06-26 Thread GitBox 


dependabot[bot] opened a new pull request, #62:
URL: https://github.com/apache/airavata-sandbox/pull/62

   Bumps [async](https://github.com/caolan/async) from 2.6.3 to 2.6.4.
   
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   https://github.com/caolan/async/commit/8870da9d5022bab310413041b4079e10db3980b7;>8870da9
 Update built files
   https://github.com/caolan/async/commit/4df6754ef4e96a742956df8782fee27242a2ea12;>4df6754
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[GitHub] [airavata-sandbox] dependabot[bot] opened a new pull request, #61: Bump eventsource from 1.1.0 to 1.1.2 in /gsoc2022/jupyter-platform-dashboard

2022-06-26 Thread GitBox 


dependabot[bot] opened a new pull request, #61:
URL: https://github.com/apache/airavata-sandbox/pull/61

   Bumps [eventsource](https://github.com/EventSource/eventsource) from 1.1.0 
to 1.1.2.
   
   Changelog
   Sourced from https://github.com/EventSource/eventsource/blob/master/HISTORY.md;>eventsource's
 changelog.
   
   https://github.com/EventSource/eventsource/compare/v1.1.1...v1.1.2;>1.1.2
   
   Inline origin resolution, drops original dependency (https://github-redirect.dependabot.com/EventSource/eventsource/pull/281;>#281
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   https://github.com/EventSource/eventsource/compare/v1.1.0...v1.1.1;>1.1.1
   
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 Espen Hovlandsdal)
   
   
   
   
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   https://github.com/EventSource/eventsource/commit/0a8b85b7d29e63b05893fd820a3cb909ca9f5b37;>0a8b85b
 1.1.2
   https://github.com/EventSource/eventsource/commit/f99ae666bc0436124aed35eaadb7422dc9a07cfe;>f99ae66
 docs: update history for 1.1.2
   https://github.com/EventSource/eventsource/commit/06c9721b47b327301a4aefe63e0a76a0b60a7585;>06c9721
 chore: rebuild polyfill
   https://github.com/EventSource/eventsource/commit/9494642e9f4b39f927f3952e6caad07acff688f3;>9494642
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   https://github.com/EventSource/eventsource/commit/aa7a40843a978f42c0babdec125bf9e0a83bf515;>aa7a408
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 chore: rebuild polyfill
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[GitHub] [airavata-sandbox] dependabot[bot] opened a new pull request, #60: Bump minimist from 1.2.5 to 1.2.6 in /gsoc2022/jupyter-platform-dashboard

2022-06-26 Thread GitBox 


dependabot[bot] opened a new pull request, #60:
URL: https://github.com/apache/airavata-sandbox/pull/60

   Bumps [minimist](https://github.com/substack/minimist) from 1.2.5 to 1.2.6.
   
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[GitHub] [airavata-sandbox] DImuthuUpe merged pull request #59: Jupyter Platform Dashboard

2022-06-26 Thread GitBox 


DImuthuUpe merged PR #59:
URL: https://github.com/apache/airavata-sandbox/pull/59


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Re: Airavata Django Portal

2022-06-26 Thread DImuthu Upeksha 
Hi Lahiru,

Thanks for the PR. I just merged it. For the error in django portal, you
need to verify whether you can telnet to airavata.host:8443. If not, there
is some issue in API Server. Please send API server logs as well

Dimuthu

On Sun, Jun 26, 2022 at 7:06 AM Lahiru Jayathilake <
lahirujayathil...@gmail.com> wrote:

> Hello Everyone,
>
> A PR was created addressing the following issues. (
> https://github.com/apache/airavata/pull/306)
> * Due to some recent security changes were done to "less secure Gmail
> accounts" on 30-May-2022[1] (Updated the
> airavata/modules/ide-integration/README.md)
> * An Enum error when running the JobMonitorStarter (updated the
> email-config.yaml file)
>
> I was following
> https://github.com/apache/airavata/tree/develop/modules/ide-integration doc
> and when I tried to log in to the portal using "default-admin/123456"
> credentials I'm getting the following error.
>
> HTTPSConnectionPool(host='airavata.host', port=8443): Max retries exceeded
>> with url: /auth/realms/default/protocol/openid-connect/token (Caused by
>> SSLError(SSLEOFError(8, 'EOF occurred in violation of protocol
>> (_ssl.c:1122)')))
>
>
> Full log - https://dpaste.com/3MLV5CSKH
>
> Does anyone know how to resolve this?
>
> [1] - https://support.google.com/accounts/answer/6010255?hl=en
>
> Thanks,
> Lahiru
>
>
> On Fri, Jun 24, 2022 at 2:24 AM Lahiru Jayathilake <
> lahirujayathil...@gmail.com> wrote:
>
>> Hi Everyone,
>>
>> I've been going through the following documentation to set up a local
>> Airavata Django development environment and try out the given samples.
>>
>> * https://github.com/apache/airavata/tree/develop/modules/ide-integration
>> * https://github.com/apache/airavata-django-portal#getting-started
>> *
>> https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/new_django_app/
>>
>> Due to some code changes, one of the docs needed to be updated.
>> I've already created a pull request for that -
>> https://github.com/apache/airavata-django-portal/pull/105
>>
>>
>> When starting the API server (according to this
>> 
>> guide) I encountered an issue with the IntelliJ Idea version 2022.1.3.
>> (MacOS)
>>
>> Exception - Module 'platform-monitoring' production:
>>> java.lang.NoClassDefFoundError: com/intellij/openapi/vfs/VfsUtil
>>
>>
>> Tried updating the relevant plugins and a few ways suggested in the
>> Jetbrains issue track. However, the only way I could resolve this was to
>> downgrade the Intellij Idea. (working for 2020.3.4 version). Has anyone
>> faced a similar issue?
>>
>> Cheers!
>> Lahiru
>>
>
>
> --
> Lahiru Jayathilake
> Department of Computer Science and Engineering,
> Faculty of Engineering,
> University of Moratuwa
>
> mobile : +94 (71) 912 8355
>
> 
>

[GitHub] [airavata] DImuthuUpe merged pull request #306: Fixed enum constant issue and updated the readme to align with new gmail security changes

2022-06-26 Thread GitBox 


DImuthuUpe merged PR #306:
URL: https://github.com/apache/airavata/pull/306


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[GitHub] [airavata] DImuthuUpe commented on pull request #306: Fixed enum constant issue and updated the readme to align with new gmail security changes

2022-06-26 Thread GitBox 


DImuthuUpe commented on PR #306:
URL: https://github.com/apache/airavata/pull/306#issuecomment-1166578090

   Thanks @lahirujayathilake 


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Re: Airavata Django Portal

2022-06-26 Thread Lahiru Jayathilake 
Hello Everyone,

A PR was created addressing the following issues. (
https://github.com/apache/airavata/pull/306)
* Due to some recent security changes were done to "less secure Gmail
accounts" on 30-May-2022[1] (Updated the
airavata/modules/ide-integration/README.md)
* An Enum error when running the JobMonitorStarter (updated the
email-config.yaml file)

I was following
https://github.com/apache/airavata/tree/develop/modules/ide-integration doc
and when I tried to log in to the portal using "default-admin/123456"
credentials I'm getting the following error.

HTTPSConnectionPool(host='airavata.host', port=8443): Max retries exceeded
> with url: /auth/realms/default/protocol/openid-connect/token (Caused by
> SSLError(SSLEOFError(8, 'EOF occurred in violation of protocol
> (_ssl.c:1122)')))


Full log - https://dpaste.com/3MLV5CSKH

Does anyone know how to resolve this?

[1] - https://support.google.com/accounts/answer/6010255?hl=en

Thanks,
Lahiru


On Fri, Jun 24, 2022 at 2:24 AM Lahiru Jayathilake <
lahirujayathil...@gmail.com> wrote:

> Hi Everyone,
>
> I've been going through the following documentation to set up a local
> Airavata Django development environment and try out the given samples.
>
> * https://github.com/apache/airavata/tree/develop/modules/ide-integration
> * https://github.com/apache/airavata-django-portal#getting-started
> *
> https://apache-airavata-django-portal.readthedocs.io/en/latest/dev/new_django_app/
>
> Due to some code changes, one of the docs needed to be updated.
> I've already created a pull request for that -
> https://github.com/apache/airavata-django-portal/pull/105
>
>
> When starting the API server (according to this
> 
> guide) I encountered an issue with the IntelliJ Idea version 2022.1.3.
> (MacOS)
>
> Exception - Module 'platform-monitoring' production:
>> java.lang.NoClassDefFoundError: com/intellij/openapi/vfs/VfsUtil
>
>
> Tried updating the relevant plugins and a few ways suggested in the
> Jetbrains issue track. However, the only way I could resolve this was to
> downgrade the Intellij Idea. (working for 2020.3.4 version). Has anyone
> faced a similar issue?
>
> Cheers!
> Lahiru
>


-- 
Lahiru Jayathilake
Department of Computer Science and Engineering,
Faculty of Engineering,
University of Moratuwa

mobile : +94 (71) 912 8355

[GitHub] [airavata] lahirujayathilake opened a new pull request, #306: Fixed enum constant issue and updated the readme to align with new gmail security changes

2022-06-26 Thread GitBox 


lahirujayathilake opened a new pull request, #306:
URL: https://github.com/apache/airavata/pull/306

   * Fixed the following issue changing - "HTCondor" to "HTCONDOR"
`Exception in thread "main" java.lang.IllegalArgumentException: No enum 
constant 
org.apache.airavata.model.appcatalog.computeresource.ResourceJobManagerType.HTCondor
 at java.base/java.lang.Enum.valueOf(Enum.java:240) at 
org.apache.airavata.model.appcatalog.computeresource.ResourceJobManagerType.valueOf(ResourceJobManagerType.java:50)
 at 
org.apache.airavata.monitor.email.EmailBasedMonitor.lambda$loadContext$0(EmailBasedMonitor.java:106)
 at java.base/java.util.ArrayList.forEach(ArrayList.java:1541) at 
org.apache.airavata.monitor.email.EmailBasedMonitor.loadContext(EmailBasedMonitor.java:103)
 at 
org.apache.airavata.monitor.email.EmailBasedMonitor.init(EmailBasedMonitor.java:73)
 at 
org.apache.airavata.monitor.email.EmailBasedMonitor.(EmailBasedMonitor.java:68)
 at 
org.apache.airavata.ide.integration.JobMonitorStarter.main(JobMonitorStarter.java:7)`
   
   * The README.md document was updated due to the recent security changes that 
happened to Gmail


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