Re: Apache cTAKES 4.0.0.1 : UMLS Authentication Patch

[Pei Chen]

- Link to public KEYS to verify the sigs?
- Link to the VOTE results?
- Anyone get a chance to download/test/verify the release candidate
artifact in staging before dist'ing?

Not sure if the release guide procedures changed, but it's fairly typical
https://web.archive.org/web/20140701075131/http://ctakes.apache.org/ctakes-release-guide.html



On Wed, Jan 20, 2021 at 10:25 AM Finan, Sean
 wrote:
>
> ???As some have experienced, the U.S.A. National Library of Medicine (NLM) 
> has changed the authentication method for using the Unified Medical Language 
> System (UMLS).
>
> https://www.nlm.nih.gov/research/umls/index.html
>
>
> Though a bit late in its arrival, Apache cTAKES now has a patch release that 
> supports the new UMLS authentication method.
>
>
> The release number is 4.0.0.1, an update of the previous release version 
> 4.0.0 with a single change to enable the new UMLS authentication.
>
> No other code or functionality has been modified and there are no 
> enhancements to the previous release 4.0.0
>
>
> There are instructions for use on the Apache cTAKES wiki.
>
> https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+4.0.0.1
>
>
> The source code is available in the 4.0.0.1 tag Subversion (svn) repository.
>
> https://svn.apache.org/repos/asf/ctakes/tags/ctakes-4.0.0.1/
>
>
> The jar and pom files are available from maven central and any Applications 
> utilizing Apache cTAKES as an Apache Maven dependency should update their pom 
> files.
>
> https://search.maven.org/search?q=ctakes
>
>
> At this time the Apache infra script that points mirror download servers to 
> the pre-built zip/archive files has not run.  I hope that the mirror servers 
> are updated in a day or two.
>
> When the mirror servers are updated the buttons on the "Downloads" page of 
> ctakes.apache.org should trigger a download of the patch version.  Until then 
> you will get a "page not found" error.
>
> Until the pre-built archive downloads are available through the website, you 
> can find them in the release repository.
>
> https://repository.apache.org/content/repositories/releases/org/apache/ctakes/ctakes-core/4.0.0.1/
>
>
> For more information please visit the wiki page on the Apache cTAKES 4.0.0.1 
> patch release.
>
> https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+4.0.0.1
>
>
>
> A very special thanks goes to Peter Abramowitsch for conception and original 
> implementation of the authentication code and workflow.
>
>
> Many thanks to those who boldly tested, documented and otherwise made this 
> patch and its trunk equivalent possible, including
>
> Kean Kaufmann
>
> Gandhi Rajan
>
> Eugenia Monogyiou
>
> Timothy Miller
>
> and anybody else that I have forgotten (apologies).
>
>
> ?And for those of you gave gave me a bit of prodding to get this wrapped up 
> and published ... in the end I am grateful and you have done us all a service.
>
>
> Cheers,
>
> Sean
>

real time indexing of notes

[Greg Silverman]

I recall a thread recently about how cTAKES was being used for real-time
indexing of notes. Does anyone have the references to which this referred
(I believe it was about a SPARC cluster).

Thanks!

Greg--

-- 
Greg M. Silverman
Senior Systems Developer
NLP/IE 
Department of Surgery
University of Minnesota
g...@umn.edu