Re: [OMPI devel] Defect from ticket #3079 still present in 1.6.1rc1

[Jeff Squyres]

Yes, it really should have been fixed by now.  :-\

Thanks for the nudge in reminding us -- I've bumped George to review this again 
(he's the owner of this particular section of code).  


On Jul 30, 2012, at 6:18 AM, Iliev, Hristo wrote:

> Hello,
>  
> 3 months ago I opened a ticket about an extra local data copy being made in 
> the pairwise alltoallv implementation in the “tuned” module that can hurt 
> performance in some cases:
>  
> https://svn.open-mpi.org/trac/ompi/ticket/3079
>  
> As far as I can see the milestone was set to Open MPI 1.6.1 and although it 
> was quite trivial to fix (and I have submitted the appropriate patch with the 
> ticket), the defect is still present in the latest revision of the 1.6 branch 
> and also in trunk. Given that in most cluster cases OMPI ends up using 
> “tuned” and that 1.6.1rc1 makes the pairwise algorithm the default, shouldn’t 
> this defect have been fixed by now?
>  
> Kind regards,
> Hristo Iliev
> --
> Hristo Iliev, Ph.D. -- High Performance Computing
> RWTH Aachen University, Center for Computing and Communication
> Rechen- und Kommunikationszentrum der RWTH Aachen
> Seffenter Weg 23,  D 52074  Aachen (Germany)
> Tel: +49 241 80 24367 -- Fax/UMS: +49 241 80 624367
>  
> ___
> devel mailing list
> de...@open-mpi.org
> http://www.open-mpi.org/mailman/listinfo.cgi/devel


-- 
Jeff Squyres
jsquy...@cisco.com
For corporate legal information go to: 
http://www.cisco.com/web/about/doing_business/legal/cri/

[OMPI devel] MPI_THREAD_MULTIPLE testing on trunk

[Christopher Yeoh]

Hi,

I was wondering if anyone else recently had tried to run trunk
configured with --enable-mpi-thread-multiple and an MPI program that
passed MPI_THREAD_MULTIPLE to MPI_Init_thread on a machine using the
openib btl? 

I'm seeing even very basic programs hang. If it is working for you,
what architecture are you running on? (may help me debug what is going
on with my setup). In contrast, 1.6 on the same machines work fine for
me (well as fine as MPI_THREAD_MULTIPLE has ever worked anyway ;-) 

Regards,

Chris
-- 
cy...@ozlabs.org

Re: [OMPI devel] [OMPI svn] svn:open-mpi r26934 - trunk/ompi/mca/io/ompio

[Edgar Gabriel]

oops, thanks Ralph, overlooked that one...

Edgar

On 7/31/2012 11:08 PM, svn-commit-mai...@open-mpi.org wrote:
> Author: rhc (Ralph Castain)
> Date: 2012-08-01 00:08:47 EDT (Wed, 01 Aug 2012)
> New Revision: 26934
> URL: https://svn.open-mpi.org/trac/ompi/changeset/26934
> 
> Log:
> Add missing include file
> 
> Text files modified: 
>trunk/ompi/mca/io/ompio/Makefile.am | 1 +  
>  
>1 files changed, 1 insertions(+), 0 deletions(-)
> 
> Modified: trunk/ompi/mca/io/ompio/Makefile.am
> ==
> --- trunk/ompi/mca/io/ompio/Makefile.am   Tue Jul 31 17:50:34 2012
> (r26933)
> +++ trunk/ompi/mca/io/ompio/Makefile.am   2012-08-01 00:08:47 EDT (Wed, 
> 01 Aug 2012)  (r26934)
> @@ -42,6 +42,7 @@
>  
>  sources = \
>  io_ompio.h \
> +io_ompio_nbc.h \
>  io_ompio.c \
>  io_ompio_component.c \
>  io_ompio_module.c \
> ___
> svn mailing list
> s...@open-mpi.org
> http://www.open-mpi.org/mailman/listinfo.cgi/svn
> 

-- 
Edgar Gabriel
Associate Professor
Parallel Software Technologies Lab  http://pstl.cs.uh.edu
Department of Computer Science  University of Houston
Philip G. Hoffman Hall, Room 524Houston, TX-77204, USA
Tel: +1 (713) 743-3857  Fax: +1 (713) 743-3335



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Re: [OMPI devel] === CREATE FAILURE (trunk) ===

[Jeff Squyres]

r26918 was the previous nightly tarball -- the create failure was in making the 
current nightly tarball.  So it's something that happened during the day 
yesterday that caused the failure (e.g., some header file was forgotten to be 
added to a Makefile.am).

I think Ralph fixed it in r26934.  I'll spin up a new tarball now, just to 
verify...


On Aug 1, 2012, at 12:43 AM, Paul Hargrove wrote:

> I've just built from openmpi-1.9a1r26918.tar.bz2 on a Linux/x86-64 machine 
> w/o any problems.
> So, that would seem to discount something missing from the tarball.
> 
> -Paul
> 
> On Tue, Jul 31, 2012 at 9:07 PM, Ralph Castain  wrote:
> Agreed - but I checked and didn't see anything missing.  will take 
> another look...
> 
> On Jul 31, 2012, at 9:04 PM, Paul Hargrove  wrote:
> 
>> The most likely reason for a "distcheck" to fail in this manner when a 
>> checkout is fine would be a header not getting included in the tarball due 
>> to some omission from Makefile.am
>> 
>> -Paul
>> 
>> On Tue, Jul 31, 2012 at 9:00 PM, Ralph Castain  wrote:
>> I'm not sure what to make of this one. I checked the code out and built it 
>> just fine on a linux box, including watching this file build. For whatever 
>> reason, the tarball maker just didn't find some include file?
>> 
>> 
>> On Jul 31, 2012, at 6:33 PM, MPI Team  wrote:
>> 
>> >
>> > ERROR: Command returned a non-zero exist status (trunk):
>> >   make distcheck
>> >
>> > Start time: Tue Jul 31 21:00:01 EDT 2012
>> > End time:   Tue Jul 31 21:33:05 EDT 2012
>> >
>> > ===
>> > [... previous lines snipped ...]
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:453: error: `buf' 
>> > undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:454: error: `max_data' 
>> > undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:455: error: `iov' 
>> > undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:456: error: `iovec_count' 
>> > undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:466: error: syntax error 
>> > before "ompi_file_t"
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
>> > `mca_io_ompio_datatype_is_contiguous':
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error: 
>> > `mca_io_ompio_data_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error: `data' 
>> > undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error: 
>> > `mca_io_ompio_file_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error: `fh' 
>> > undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:471: error: syntax error 
>> > before ')' token
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:474: error: `datatype' 
>> > undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:475: error: 
>> > `OMPIO_CONTIGUOUS_MEMORY' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:483: error: syntax error 
>> > before '*' token
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
>> > `mca_io_ompio_set_aggregator_props':
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error: 
>> > `mca_io_ompio_data_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error: `data' 
>> > undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error: 
>> > `mca_io_ompio_file_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error: `fh' 
>> > undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:491: error: syntax error 
>> > before ')' token
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:494: error: 
>> > `num_aggregators' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:495: error: 
>> > `bytes_per_proc' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:504: error: syntax error 
>> > before '*' token
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
>> > `mca_io_ompio_generate_current_file_view':
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error: 
>> > `mca_io_ompio_data_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error: `data' 
>> > undeclared (first 

Re: [MTT devel] [MTT svn] svn:mtt-svn r1481 - in trunk: client lib/MTT/Reporter

[Jeff Squyres]

Mike --

MongoDB is a NoSQL thingy, right?

Can you describe this plugin a bit?  Do you guys have some kind of reporter for 
MongoDB?


On Aug 1, 2012, at 5:46 AM,  wrote:

> Author: miked (Mike Dubman)
> Date: 2012-08-01 05:46:03 EDT (Wed, 01 Aug 2012)
> New Revision: 1481
> URL: https://svn.open-mpi.org/trac/mtt/changeset/1481
> 
> Log:
> add modified version mongobquery and MTTMongodb
> 
> Added:
>   trunk/client/mongobquery.pl   (contents, props changed)
>   trunk/lib/MTT/Reporter/MTTMongodb.pm
> 
> Added: trunk/client/mongobquery.pl
> ==
> --- /dev/null 00:00:00 1970   (empty, because file is newly added)
> +++ trunk/client/mongobquery.pl   2012-08-01 05:46:03 EDT (Wed, 01 Aug 
> 2012)  (r1481)
> @@ -0,0 +1,1018 @@
> +#!/usr/bin/perl
> +#
> +# Copyright (c) 2009
> +# $COPYRIGHT$
> +# 
> +# Additional copyrights may follow
> +# 
> +# $HEADER$
> +#
> +# Now that @INC is setup, bring in the modules
> +
> +#use strict;
> +#use warnings;
> +use LWP::UserAgent;
> +use HTTP::Request::Common;
> +use Data::Dumper;
> +use File::Basename;
> +use File::Temp;
> +use Config::IniFiles;
> +use YAML::XS;
> +use MongoDB;
> +use MongoDB::OID;
> +use YAML;
> +use YAML::Syck;
> +use DateTime;
> +
> +###
> +# Set variables
> +###
> +my $module_name=$0;
> +my $module_path=$0;
> +
> +$module_name=~s/([^\/\\]+)$//;
> +$module_name=$1;
> + 
> +$module_path=~s/([^\/\\]+)$//;
> +
> +
> +###
> +# Main block
> +###
> +use Getopt::Long qw(:config no_ignore_case);
> +
> +my $opt_help;
> +my $opt_server;
> +my $opt_username;
> +my $opt_password;
> +
> +my $opt_ping;
> +my $opt_upload;
> +my $opt_query;
> +my $opt_view;
> +my $opt_admin;
> +
> +my @opt_data;
> +my @opt_raw;
> +
> +my $opt_gqls;
> +my @opt_gqlf;
> +my @opt_section;
> +my $opt_dir;
> +my $opt_no_raw;
> +
> +my $opt_dstore;
> +my $opt_info;
> +my $opt_format;
> +my $opt_mailto;
> +my $opt_regression_from;
> +my $opt_regression_to;
> +my $opt_regression_step;
> +
> +my @opt_newuser;
> +
> +GetOptions ("help|h" => \$opt_help,
> +"server|a=s" => \$opt_server,
> +"username|u=s" => \$opt_username,
> +"password|p=s" => \$opt_password,
> +"ping" => \$opt_ping,
> +"upload" => \$opt_upload,
> +"query" => \$opt_query,
> +"view" => \$opt_view,
> +"admin" => \$opt_admin,
> +
> +"data|S=s" => \@opt_data,
> +"raw|R=s" => \@opt_raw, 
> +
> +"gqls|L=s" => \$opt_gqls,
> +"gqlf|F=s" => \@opt_gqlf,
> +"section|T=s" => \@opt_section,
> +"dir|O=s" => \$opt_dir,
> +"no-raw" => \$opt_no_raw,
> +
> +"dstore|D" => \$opt_dstore,
> +"info|I=s" => \$opt_info,
> +"format|V=s" => \$opt_format,
> +"email|e=s" => \$opt_mailto,
> +
> +"newuser=s{3,5}" => \@opt_newuser,
> +
> + "regression-from=s" => \$opt_regression_from,
> + "regression-to=s" => \$opt_regression_to,
> + "regression-step=s" => \$opt_regression_step
> +);
> +
> +
> +my $url = ();
> +my $username = ();
> +my $password = ();
> +
> +$url = $opt_server ? $opt_server : "http://bgate.mellanox.com:27017;;
> +$url =~ s/http:\/\///;
> +$username = $opt_username ? $opt_username : "admin";
> +$password = $opt_password ? $opt_password : "";
> +
> +my %conf = ('url' => "$url\/client",
> +'username' => $username,
> +'password' => $password
> +);
> +
> +if ($opt_help)
> +{
> +my $action = '';
> + 
> +$action = 'ping' if ($opt_ping);
> +$action = 'upload' if ($opt_upload);
> +$action = 'query' if ($opt_query);
> +$action = 'view' if ($opt_view);
> +$action = 'admin' if ($opt_admin);
> +
> +help($action);
> +
> +exit;
> +}
> +elsif ($opt_ping)
> +{
> + #ping( \%conf ); 
> + #print $url," url\n";
> + my $conn = MongoDB::Connection->new(host => $url );
> + if($conn != 0)
> + {
> + print"\n\nping: success\n\n";
> + }
> +}
> +elsif ($opt_upload)
> +{
> +if ($#opt_data < 0) 
> +{
> +help('upload');
> +}
> + my @data = split(/,/,join(',',@opt_data)) if (@opt_data);
> + my @raw = split(/,/,join(',',@opt_raw)) if (@opt_raw);
> +
> +# Check if files existed
> + verify_opt_file( @data );
> + verify_opt_file( @raw );
> +
> + $conf{data} = \@data;
> + $conf{raw} = \@raw;  
> +
> + upload( \%conf ); 
> +}
> +elsif ($opt_query)
> +{
> +my $gql = ();
> +if ($opt_gqls) 
> +{
> +$gql = $opt_gqls;
> +}
> +

Re: [OMPI devel] === CREATE FAILURE (trunk) ===

[Paul Hargrove]

I've just built from openmpi-1.9a1r26918.tar.bz2 on a Linux/x86-64 machine
w/o any problems.
So, that would seem to discount something missing from the tarball.

-Paul

On Tue, Jul 31, 2012 at 9:07 PM, Ralph Castain  wrote:

> Agreed - but I checked and didn't see anything missing.  will take
> another look...
>
> On Jul 31, 2012, at 9:04 PM, Paul Hargrove  wrote:
>
> The most likely reason for a "distcheck" to fail in this manner when a
> checkout is fine would be a header not getting included in the tarball due
> to some omission from Makefile.am
>
> -Paul
>
> On Tue, Jul 31, 2012 at 9:00 PM, Ralph Castain  wrote:
>
>> I'm not sure what to make of this one. I checked the code out and built
>> it just fine on a linux box, including watching this file build. For
>> whatever reason, the tarball maker just didn't find some include file?
>>
>>
>> On Jul 31, 2012, at 6:33 PM, MPI Team  wrote:
>>
>> >
>> > ERROR: Command returned a non-zero exist status (trunk):
>> >   make distcheck
>> >
>> > Start time: Tue Jul 31 21:00:01 EDT 2012
>> > End time:   Tue Jul 31 21:33:05 EDT 2012
>> >
>> > ===
>> > [... previous lines snipped ...]
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:453: error: `buf'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:454: error: `max_data'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:455: error: `iov'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:456: error:
>> `iovec_count' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:466: error: syntax
>> error before "ompi_file_t"
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function
>> `mca_io_ompio_datatype_is_contiguous':
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error:
>> `mca_io_ompio_data_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error: `data'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error:
>> `mca_io_ompio_file_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error: `fh'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:471: error: syntax
>> error before ')' token
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:474: error: `datatype'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:475: error:
>> `OMPIO_CONTIGUOUS_MEMORY' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:483: error: syntax
>> error before '*' token
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function
>> `mca_io_ompio_set_aggregator_props':
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error:
>> `mca_io_ompio_data_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error: `data'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error:
>> `mca_io_ompio_file_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error: `fh'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:491: error: syntax
>> error before ')' token
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:494: error:
>> `num_aggregators' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:495: error:
>> `bytes_per_proc' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:504: error: syntax
>> error before '*' token
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function
>> `mca_io_ompio_generate_current_file_view':
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error:
>> `mca_io_ompio_data_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error: `data'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:511: error:
>> `mca_io_ompio_file_t' undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:511: error: `fh'
>> undeclared (first use in this function)
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:513: error: syntax
>> error before ')' token
>> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:516: error: `max_data'
>> undeclared (first use in this function)
>> > 

Re: [OMPI devel] === CREATE FAILURE (trunk) ===

[Ralph Castain]

Agreed - but I checked and didn't see anything missing.  will take 
another look...

On Jul 31, 2012, at 9:04 PM, Paul Hargrove  wrote:

> The most likely reason for a "distcheck" to fail in this manner when a 
> checkout is fine would be a header not getting included in the tarball due to 
> some omission from Makefile.am
> 
> -Paul
> 
> On Tue, Jul 31, 2012 at 9:00 PM, Ralph Castain  wrote:
> I'm not sure what to make of this one. I checked the code out and built it 
> just fine on a linux box, including watching this file build. For whatever 
> reason, the tarball maker just didn't find some include file?
> 
> 
> On Jul 31, 2012, at 6:33 PM, MPI Team  wrote:
> 
> >
> > ERROR: Command returned a non-zero exist status (trunk):
> >   make distcheck
> >
> > Start time: Tue Jul 31 21:00:01 EDT 2012
> > End time:   Tue Jul 31 21:33:05 EDT 2012
> >
> > ===
> > [... previous lines snipped ...]
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:453: error: `buf' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:454: error: `max_data' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:455: error: `iov' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:456: error: `iovec_count' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:466: error: syntax error 
> > before "ompi_file_t"
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
> > `mca_io_ompio_datatype_is_contiguous':
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error: 
> > `mca_io_ompio_data_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error: `data' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error: 
> > `mca_io_ompio_file_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error: `fh' undeclared 
> > (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:471: error: syntax error 
> > before ')' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:474: error: `datatype' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:475: error: 
> > `OMPIO_CONTIGUOUS_MEMORY' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:483: error: syntax error 
> > before '*' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
> > `mca_io_ompio_set_aggregator_props':
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error: 
> > `mca_io_ompio_data_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error: `data' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error: 
> > `mca_io_ompio_file_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error: `fh' undeclared 
> > (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:491: error: syntax error 
> > before ')' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:494: error: 
> > `num_aggregators' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:495: error: 
> > `bytes_per_proc' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:504: error: syntax error 
> > before '*' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
> > `mca_io_ompio_generate_current_file_view':
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error: 
> > `mca_io_ompio_data_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error: `data' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:511: error: 
> > `mca_io_ompio_file_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:511: error: `fh' undeclared 
> > (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:513: error: syntax error 
> > before ')' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:516: error: `max_data' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:517: error: `f_iov' 
> > undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:518: error: `iov_count' 
> > undeclared (first use in this function)
> > 

Re: [OMPI devel] === CREATE FAILURE (trunk) ===

[Paul Hargrove]

The most likely reason for a "distcheck" to fail in this manner when a
checkout is fine would be a header not getting included in the tarball due
to some omission from Makefile.am

-Paul

On Tue, Jul 31, 2012 at 9:00 PM, Ralph Castain  wrote:

> I'm not sure what to make of this one. I checked the code out and built it
> just fine on a linux box, including watching this file build. For whatever
> reason, the tarball maker just didn't find some include file?
>
>
> On Jul 31, 2012, at 6:33 PM, MPI Team  wrote:
>
> >
> > ERROR: Command returned a non-zero exist status (trunk):
> >   make distcheck
> >
> > Start time: Tue Jul 31 21:00:01 EDT 2012
> > End time:   Tue Jul 31 21:33:05 EDT 2012
> >
> > ===
> > [... previous lines snipped ...]
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:453: error: `buf'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:454: error: `max_data'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:455: error: `iov'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:456: error:
> `iovec_count' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:466: error: syntax error
> before "ompi_file_t"
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function
> `mca_io_ompio_datatype_is_contiguous':
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error:
> `mca_io_ompio_data_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error: `data'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error:
> `mca_io_ompio_file_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error: `fh'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:471: error: syntax error
> before ')' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:474: error: `datatype'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:475: error:
> `OMPIO_CONTIGUOUS_MEMORY' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:483: error: syntax error
> before '*' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function
> `mca_io_ompio_set_aggregator_props':
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error:
> `mca_io_ompio_data_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error: `data'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error:
> `mca_io_ompio_file_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error: `fh'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:491: error: syntax error
> before ')' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:494: error:
> `num_aggregators' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:495: error:
> `bytes_per_proc' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:504: error: syntax error
> before '*' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function
> `mca_io_ompio_generate_current_file_view':
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error:
> `mca_io_ompio_data_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error: `data'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:511: error:
> `mca_io_ompio_file_t' undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:511: error: `fh'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:513: error: syntax error
> before ')' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:516: error: `max_data'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:517: error: `f_iov'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:518: error: `iov_count'
> undeclared (first use in this function)
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:527: error: syntax error
> before '*' token
> > ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function
> `mca_io_ompio_free_f_io_array':
> > 

Re: [OMPI devel] === CREATE FAILURE (trunk) ===

[Ralph Castain]

I'm not sure what to make of this one. I checked the code out and built it just 
fine on a linux box, including watching this file build. For whatever reason, 
the tarball maker just didn't find some include file?


On Jul 31, 2012, at 6:33 PM, MPI Team  wrote:

> 
> ERROR: Command returned a non-zero exist status (trunk):
>   make distcheck
> 
> Start time: Tue Jul 31 21:00:01 EDT 2012
> End time:   Tue Jul 31 21:33:05 EDT 2012
> 
> ===
> [... previous lines snipped ...]
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:453: error: `buf' undeclared 
> (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:454: error: `max_data' 
> undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:455: error: `iov' undeclared 
> (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:456: error: `iovec_count' 
> undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:466: error: syntax error 
> before "ompi_file_t"
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
> `mca_io_ompio_datatype_is_contiguous':
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error: 
> `mca_io_ompio_data_t' undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:468: error: `data' undeclared 
> (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error: 
> `mca_io_ompio_file_t' undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:469: error: `fh' undeclared 
> (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:471: error: syntax error 
> before ')' token
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:474: error: `datatype' 
> undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:475: error: 
> `OMPIO_CONTIGUOUS_MEMORY' undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:483: error: syntax error 
> before '*' token
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
> `mca_io_ompio_set_aggregator_props':
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error: 
> `mca_io_ompio_data_t' undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:488: error: `data' undeclared 
> (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error: 
> `mca_io_ompio_file_t' undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:489: error: `fh' undeclared 
> (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:491: error: syntax error 
> before ')' token
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:494: error: `num_aggregators' 
> undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:495: error: `bytes_per_proc' 
> undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:504: error: syntax error 
> before '*' token
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
> `mca_io_ompio_generate_current_file_view':
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error: 
> `mca_io_ompio_data_t' undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:510: error: `data' undeclared 
> (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:511: error: 
> `mca_io_ompio_file_t' undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:511: error: `fh' undeclared 
> (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:513: error: syntax error 
> before ')' token
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:516: error: `max_data' 
> undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:517: error: `f_iov' 
> undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:518: error: `iov_count' 
> undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: At top level:
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:527: error: syntax error 
> before '*' token
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c: In function 
> `mca_io_ompio_free_f_io_array':
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:529: error: 
> `mca_io_ompio_data_t' undeclared (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:529: error: `data' undeclared 
> (first use in this function)
> ../../../../../ompi/mca/io/ompio/io_ompio_nbc.c:530: error: 
> `mca_io_ompio_file_t' undeclared (first use in this