subject:"\[dspace\-tech\] Can't get statistics to work after upgrading from 1.8.x to 5.x"

[dspace-tech] Can't get statistics to work after upgrading from 1.8.x to 5.x

2015-12-17 Thread Tiago Delboni

Hi!

I'm working on upgrading DSpace from 1.8.2 to 5.4. I guess was able to put 
everything working but the statistics. Everytime I click the Statistics 
menu, in JSPUI, DSpace come out with a Internal Server Error.
Bellow is the relevant part gattered from dspace.log. Any ideas how to fix 
it? 

Also, I would like to know if I can keep the historical statistics I have 
on 1.8.x. What I did, trying to achieve this, was to copy the contents from 
[dspace1.8]/log and [dspace1.8]/solr/statistics/data to [dspace5.4] and ran 
[dspace5.4]/bin/dspace 
solr-reindex-statistics.

2015-12-17 13:15:12,864 WARN  
org.dspace.app.webui.servlet.InternalErrorServlet @ 
:session_id=0CFF63BC0604F2B56DD0EE375E575ED9:internal_error:-- URL Was: 
https://dspace-novo.almg.gov.br/jspui/statistics
-- Method: GET
-- Parameters were:

java.lang.NullPointerException
at 
org.dspace.app.webui.servlet.StatisticsServlet.showStatistics(StatisticsServlet.java:121)
at 
org.dspace.app.webui.servlet.StatisticsServlet.doDSPost(StatisticsServlet.java:68)
at 
org.dspace.app.webui.servlet.StatisticsServlet.doDSGet(StatisticsServlet.java:49)
at 
org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:119)
at 
org.dspace.app.webui.servlet.DSpaceServlet.doGet(DSpaceServlet.java:67)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:622)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at 
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:291)
at 
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at 
org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
at 
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239)
at 
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at 
org.dspace.utils.servlet.DSpaceWebappServletFilter.doFilter(DSpaceWebappServletFilter.java:78)
at 
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239)
at 
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
at 
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
at 
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:106)
at 
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:502)
at 
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:142)
at 
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:79)
at 
org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:616)
at 
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:88)
at 
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:518)
at 
org.apache.coyote.ajp.AbstractAjpProcessor.process(AbstractAjpProcessor.java:844)
at 
org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:673)
at 
org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1526)
at 
org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:1482)
at 
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at 
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at 
org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.lang.Thread.run(Thread.java:745)
2015-12-17 13:15:12,865 WARN  org.dspace.app.webui.util.UIUtil @ Unable to 
send email alert
java.lang.NullPointerException
at 
org.dspace.storage.rdbms.DatabaseManager.queryTable(DatabaseManager.java:230)
at 
org.dspace.content.DSpaceObject$MetadataCache.retrieveMetadata(DSpaceObject.java:1330)
at 
org.dspace.content.DSpaceObject$MetadataCache.get(DSpaceObject.java:1265)
at 
org.dspace.content.DSpaceObject.getMetadata(DSpaceObject.java:676)
at 
org.dspace.content.DSpaceObject.getMetadata(DSpaceObject.java:585)
at 
org.dspace.content.DSpaceObject.getMetadataFirstValue(DSpaceObject.java:653)
at org.dspace.eperson.EPerson.getFirstName(EPerson.java:772)
at org.dspace.eperson.EPerson.getFullName(EPerson.java:748)
at org.dspace.app.webui.util.UIUtil.sendAlert(UIUtil.java:419)
at 
org.dspace.app.webui.servlet.InternalErrorServlet.doGet(InternalErrorServlet.java:54)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:622)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at 
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:291)
at

Re: [dspace-tech] Can't get statistics to work after upgrading from 1.8.x to 5.x

2015-12-17 Thread Monika Mevenkamp

I am getting ready to do the same uproar - and I pieced together some notes
based on
wiki-doc: https://wiki.duraspace.org/display/DSDOC5x/Upgrading+DSpace


you can test whether your solr version is outdated (probably you are ok
there since you say  everything but stats works)

# test that index is outdated   anything smaller than 3.5
/dspace/bin/dspace dsrun org.dspace.app.util.IndexVersion
/dspace/solr/statistics/data/index

but if your versions are off do the following - get yourself an uptodate
lucene-core-3.5.0.jar

# upgrade statistics index
# in home directory we have the jar parked
java -cp lucene-core-3.5.0.jar org.apache.lucene.index.IndexUpgrader
/dspace/solr/statistics/data/index/

# expect to see 3.5
/dspace/bin/dspace dsrun org.dspace.app.util.IndexVersion
/dspace/solr/statistics/data/index

#update index
ant update_solr_indexes
/dspace/bin/dspace dsrun org.dspace.app.util.IndexVersion
/dspace/solr/statistics/data/index


...
Monika Mevenkamp
http://tinyurl.com/mevenkamp

On Thu, Dec 17, 2015 at 10:39 AM, Tiago Delboni  wrote:

> Hi!
>
> I'm working on upgrading DSpace from 1.8.2 to 5.4. I guess was able to put
> everything working but the statistics. Everytime I click the Statistics
> menu, in JSPUI, DSpace come out with a Internal Server Error.
> Bellow is the relevant part gattered from dspace.log. Any ideas how to
> fix it?
>
> Also, I would like to know if I can keep the historical statistics I have
> on 1.8.x. What I did, trying to achieve this, was to copy the contents from
> [dspace1.8]/log and [dspace1.8]/solr/statistics/data to [dspace5.4] and
> ran [dspace5.4]/bin/dspace solr-reindex-statistics.
>
> 2015-12-17 13:15:12,864 WARN
> org.dspace.app.webui.servlet.InternalErrorServlet @
> :session_id=0CFF63BC0604F2B56DD0EE375E575ED9:internal_error:-- URL Was:
> https://dspace-novo.almg.gov.br/jspui/statistics
> -- Method: GET
> -- Parameters were:
>
> java.lang.NullPointerException
> at
> org.dspace.app.webui.servlet.StatisticsServlet.showStatistics(StatisticsServlet.java:121)
> at
> org.dspace.app.webui.servlet.StatisticsServlet.doDSPost(StatisticsServlet.java:68)
> at
> org.dspace.app.webui.servlet.StatisticsServlet.doDSGet(StatisticsServlet.java:49)
> at
> org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:119)
> at
> org.dspace.app.webui.servlet.DSpaceServlet.doGet(DSpaceServlet.java:67)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:622)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:291)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at
> org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at
> org.dspace.utils.servlet.DSpaceWebappServletFilter.doFilter(DSpaceWebappServletFilter.java:78)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:106)
> at
> org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:502)
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:142)
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:79)
> at
> org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:616)
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:88)
> at
> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:518)
> at
> org.apache.coyote.ajp.AbstractAjpProcessor.process(AbstractAjpProcessor.java:844)
> at
> org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:673)
> at
> org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1526)
> at
> org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(NioEndpoint.java:1482)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> at
> org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
> at java.lang.Thread.run(Thread.java:745)
> 2015-12-17 13:15:12,865 WARN

Re: [dspace-tech] Can't get statistics to work after upgrading from 1.8.x to 5.x

2015-12-17 Thread Tiago Delboni

Hi Monika!

Index version looks good:

dspace@dspace-novo:/opt/dspace/deploy/bin> ./dspace dsrun
org.dspace.app.util.IndexVersion
/opt/dspace/deploy/solr/statistics/data/index
4.10.2


2015-12-17 13:53 GMT-02:00 Monika C. Mevenkamp :

> You need to upgrade your statistics and solr index ?
>
> I am getting ready to do the same uproar - and I pieced together some
> notes based on
> wiki-doc: https://wiki.duraspace.org/display/DSDOC5x/Upgrading+DSpace
> 
>
>
> you can test whether your solr version is outdated (probably you are ok
> there since you say  everything but stats works)
>
> # test that index is outdated   anything smaller than 3.5
> /dspace/bin/dspace dsrun org.dspace.app.util.IndexVersion
> /dspace/solr/statistics/data/index
>
> but if your versions are off do the following - get yourself an uptodate
> lucene-core-3.5.0.jar
>
> # upgrade statistics index
> # in home directory we have the jar parked
> java -cp lucene-core-3.5.0.jar org.apache.lucene.index.IndexUpgrader
>  /dspace/solr/statistics/data/index/
>
> # expect to see 3.5
> /dspace/bin/dspace dsrun org.dspace.app.util.IndexVersion
> /dspace/solr/statistics/data/index
>
> #update index
> ant update_solr_indexes
> /dspace/bin/dspace dsrun org.dspace.app.util.IndexVersion
> /dspace/solr/statistics/data/index
>
>
>
> —
> Monika Mevenkamp
> Digital Repository Infrastructure Developer
> Princeton University
> Phone: 609-258-4161
> Skype: mo-meven
>
> On Dec 17, 2015, at 10:39 AM, Tiago Delboni  wrote:
>
> Hi!
>
> I'm working on upgrading DSpace from 1.8.2 to 5.4. I guess was able to put
> everything working but the statistics. Everytime I click the Statistics
> menu, in JSPUI, DSpace come out with a Internal Server Error.
> Bellow is the relevant part gattered from dspace.log. Any ideas how to
> fix it?
>
> Also, I would like to know if I can keep the historical statistics I have
> on 1.8.x. What I did, trying to achieve this, was to copy the contents from
> [dspace1.8]/log and [dspace1.8]/solr/statistics/data to [dspace5.4] and
> ran [dspace5.4]/bin/dspace solr-reindex-statistics.
>
> 2015-12-17 13:15:12,864 WARN
> org.dspace.app.webui.servlet.InternalErrorServlet @
> :session_id=0CFF63BC0604F2B56DD0EE375E575ED9:internal_error:-- URL Was:
> https://dspace-novo.almg.gov.br/jspui/statistics
> -- Method: GET
> -- Parameters were:
>
> java.lang.NullPointerException
> at
> org.dspace.app.webui.servlet.StatisticsServlet.showStatistics(StatisticsServlet.java:121)
> at
> org.dspace.app.webui.servlet.StatisticsServlet.doDSPost(StatisticsServlet.java:68)
> at
> org.dspace.app.webui.servlet.StatisticsServlet.doDSGet(StatisticsServlet.java:49)
> at
> org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:119)
> at
> org.dspace.app.webui.servlet.DSpaceServlet.doGet(DSpaceServlet.java:67)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:622)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:291)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at
> org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at
> org.dspace.utils.servlet.DSpaceWebappServletFilter.doFilter(DSpaceWebappServletFilter.java:78)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:239)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219)
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:106)
> at
> org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:502)
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:142)
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:79)
> at
> org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:616)
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:88)
> at
> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:518)
> at
> org.apache.coyote.ajp.AbstractAjpProcessor.process(AbstractAjpProcessor.java:844)
> at
> org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:673)
> at
>

Re: [dspace-tech] Can't get statistics to work after upgrading from 1.8.x to 5.x

2015-12-17 Thread Andrea Schweer

Hi,

On 18/12/15 04:39, Tiago Delboni wrote:

Hi!

I'm working on upgrading DSpace from 1.8.2 to 5.4. I guess was
able to put everything working but the statistics. Everytime I
click the Statistics menu, in JSPUI, DSpace come out with a
Internal Server Error.
Bellow is the relevant part gattered from dspace.log.
Any ideas how to fix it?

Also, I would like to know if I can keep the historical
statistics I have on 1.8.x. What I did, trying to achieve this,
was to copy the contents from [dspace1.8]/log and [dspace1.8]/solr/statistics/data
to [dspace5.4]
and ran [dspace5.4]/bin/dspace
solr-reindex-statistics.

The statistics page you're referring to (compare
http://demo.dspace.org/jspui/statistics) is not related to the
Solr-based usage statistics at all. Instead, this page is showing
the legacy statistics populated from the log files and the .dat /
.html files generated from the log files via the stat-* commands
listed in the "Legacy statistics" section here:
https://wiki.duraspace.org/display/DSDOC5x/Command+Line+Operations#CommandLineOperations-Legacystatistics

My guess is that you didn't copy over the contents of the report
directory (that holds these .dat and .html files); looking at the
code at the line below supports that. The location of the report
directory is configured in dspace.cfg:
https://github.com/DSpace/DSpace/blob/dspace-5_x/dspace/config/dspace.cfg#L1741

So you might like to check what you have yours set to and copy the
directory across from your 1.8 [dspace] directory tree to your 5.x
directory tree.

2015-12-17
13:15:12,864 WARN
org.dspace.app.webui.servlet.InternalErrorServlet @
:session_id=0CFF63BC0604F2B56DD0EE375E575ED9:internal_error:--
URL Was: https://dspace-novo.almg.gov.br/jspui/statistics
-- Method: GET
-- Parameters were:

java.lang.NullPointerException
at
org.dspace.app.webui.servlet.StatisticsServlet.showStatistics(StatisticsServlet.java:121)

https://github.com/DSpace/DSpace/blob/dspace-5_x/dspace-jspui/src/main/java/org/dspace/app/webui/servlet/StatisticsServlet.java#L121

cheers,
Andrea
--
Dr Andrea Schweer
IRR Technical Specialist, ITS Information Systems
The University of Waikato, Hamilton, New Zealand
+64-7-837 9120

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[dspace-tech] Can't get statistics to work after upgrading from 1.8.x to 5.x

Re: [dspace-tech] Can't get statistics to work after upgrading from 1.8.x to 5.x

Re: [dspace-tech] Can't get statistics to work after upgrading from 1.8.x to 5.x

Re: [dspace-tech] Can't get statistics to work after upgrading from 1.8.x to 5.x

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