Re: [Dspace-tech] Privileges in top-level communities and lower-level communities
Hi Tim, Thanks for getting back to me and thanks for your help. Fingers crossed I will find time to look at this bug in more detail in the near future, but at least I know now whats causing this issue. Thanks, Mark On 10/01/11 17:38, Tim Donohue wrote: Mark, Aha. Now I understand. This is a reported issue with 1.6.2: https://jira.duraspace.org/browse/DS-678 I'd encourage you to add your additional comments to that issue, and/or 'vote' for that issue. Unfortunately this is a known issue at this time (and still exists in 1.7.0). We need to find a developer to work on this issue and provide a patch which resolves it. - Tim On 1/10/2011 11:21 AM, Mark Melia wrote: Hi Tim, To give a little more details what I am trying to do: A user who is a community admin is trying to add a bitstream to an item. This item has up to now no bitstreams. When she opens the upload a new bitstream page the only type of bundle she is presented with is License. Upon further investigation I have found in the addBundleOption in AddBitstreamForm.java if there are no bundles the user must be authorized as an administrator. This is checked by AuthorizeManager.isAdmin. This checks is the user is a system admin. In this case my user is only a community admin and is therefore not shown the bundle types. Now the question is - is this logically correct? Thanks for all your pointers on this. Mark On 10/01/11 15:59, Tim Donohue wrote: Hi Mark, As far as I'm aware, this should be functioning properly in DSpace 1.6.0 or above. At least we've had no other reports of bugs in this area, from what I can find. Can you provide us with more information about your setup? Are you running XMLUI or JSPUI? If XMLUI, what Theme are you using (and have you customized the theme)? Have you made any other major customizations/changes which could be affecting this? As of DSpace 1.6.0, DSpace now has a new Delegate Admins feature, which improves the inheritance of Admin rights, and lets you more easily control what individual Administrations can and cannot do. You also may want to check your 'dspace.cfg' to see if you've changed the default settings for Community Administrators. Look for this section: # Authorization system configuration - Delegate ADMIN # By default, the contents of that configuration section are commented out. This defaults to allowing a Community Admins perform all actions on any Sub-Community, Collection or Item in their Community. If you've customized these settings in any way, this obviously will affect what a Community Administrator can do. - Tim On 1/10/2011 9:46 AM, Mark Melia wrote: Hi Tim, Thanks for getting back to me. I am running DSpace 1.6.2. Thanks, Mark On 10/01/11 15:43, Tim Donohue wrote: Hi Mark, DSpace is supposed to inherit Admin permissions automatically. So, if you are an Admin of a Community, it also means you should be an Admin of all Sub-Communities, Collections or Items within that Community. Can you let us know what version of DSpace are you using? It's possible you may be running into a bug in an old version of DSpace. - Tim On 1/10/2011 8:32 AM, Mark Melia wrote: Hi all, Perhaps a better example might help here. I have a top level community - Faculty of Engineering and Computing - in this community there is a sub-community - School of Civil Engineering. The faculty dean has administrative privileges on the collections directly in the Faculty community but these privileges do not seem to extend on down to the School of Civil Engineering collections. Does anyone know if this is how DSpace is meant to behave. I would appreciate any information on this. Thanks in advance, Mark On 06/01/11 14:21, Mark Melia wrote: Hi all, I am trying to specify user privileges at a top level community and have those privileges for users using sub-communities within the top level community. So for example if I am admin in topLevelCommunity1 and communityA is in topLevelCommunity1 I should have admin privileges in communityA. This does not appear to be the case for me. Does anyone have any idea how to rectify this? Thanks, Mark -- Learn how Oracle Real Application Clusters (RAC) One Node allows customers to consolidate database storage, standardize their database environment, and, should the need arise, upgrade to a full multi-node Oracle RAC database without downtime or disruption http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech -- Gaining the trust of online customers is vital for the success of any company that requires sensitive data to be transmitted over the Web.
[Dspace-tech] Proxy Error
Hi All, Our dspace sever responds Proxy Error The proxy server received an invalid response from an upstream server. The proxy server could not handle the request GET / http://mahider.cgiar.org/ . Reason: Error reading from remote server Apache/2.2.9 (Debian) PHP/5.2.6-1+lenny9 with Suhosin-Patch proxy_html/3.0.0 Server at mahider.cgiar.org Port 80 Can anyone support us. Thank you Sisay -- Gaining the trust of online customers is vital for the success of any company that requires sensitive data to be transmitted over the Web. Learn how to best implement a security strategy that keeps consumers' information secure and instills the confidence they need to proceed with transactions. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Privileges in top-level communities and lower-level communities
On Mon, Jan 10, 2011 at 18:38, Tim Donohue tdono...@duraspace.org wrote: I'd encourage you to add your additional comments to that issue, and/or 'vote' for that issue. Unfortunately this is a known issue at this time (and still exists in 1.7.0). We need to find a developer to work on this issue and provide a patch which resolves it. I just want to report that voting doesn't work (Error occurred while voting. Please reload this issue and try again.). Regards, ~~helix84 -- Gaining the trust of online customers is vital for the success of any company that requires sensitive data to be transmitted over the Web. Learn how to best implement a security strategy that keeps consumers' information secure and instills the confidence they need to proceed with transactions. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Privileges in top-level communities and lower-level communities
Hi Helix84, I was able to add a vote today. Perhaps if refresh the page it might work? Mark On 11/01/11 09:53, helix84 wrote: On Mon, Jan 10, 2011 at 18:38, Tim Donohuetdono...@duraspace.org wrote: I'd encourage you to add your additional comments to that issue, and/or 'vote' for that issue. Unfortunately this is a known issue at this time (and still exists in 1.7.0). We need to find a developer to work on this issue and provide a patch which resolves it. I just want to report that voting doesn't work (Error occurred while voting. Please reload this issue and try again.). Regards, ~~helix84 -- Gaining the trust of online customers is vital for the success of any company that requires sensitive data to be transmitted over the Web. Learn how to best implement a security strategy that keeps consumers' information secure and instills the confidence they need to proceed with transactions. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Privileges in top-level communities and lower-level communities
On Tue, Jan 11, 2011 at 10:58, Mark Melia mark.me...@enovation.ie wrote: I was able to add a vote today. Perhaps if refresh the page it might work? So I tested with Chrome and I was able to vote. Voting doesn't work in Opera. Regards, ~~helix84 -- Gaining the trust of online customers is vital for the success of any company that requires sensitive data to be transmitted over the Web. Learn how to best implement a security strategy that keeps consumers' information secure and instills the confidence they need to proceed with transactions. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
[Dspace-tech] Data Migration from Dspace to GSDL
Hello All, Greetings from Mumbai, India! I am trying to export data, with bit streams, from Dspace to GSDL. Data export from Dspace ( Linux ) can be done quite easily. However, when the data is imported to GSDL, the metadata do not get transferred to the corresponding DC fields in GSDL. Instead, get transferred to the 'Exctracted metadata' . I highly appreciate any suggestion / solution to the problem. Dr.G.K.Manjunath Chief Librarian Indira Gandhi Inst of Development Research Film City Road Santosh Nagar Goregaon(East ) MUMBAI - 400 065 India Phone:91-22-28416528 email:g...@igidr.ac.in -- Gaining the trust of online customers is vital for the success of any company that requires sensitive data to be transmitted over the Web. Learn how to best implement a security strategy that keeps consumers' information secure and instills the confidence they need to proceed with transactions. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
[Dspace-tech] Problem with OpenSearch configuration
I have some problems with Opensearch configuration. Our search is working good with default settings, but I want to extend it to serve other fields also. For example I want to include for example dc.description.urn -field and I have in the dspace.cfg -file line webui.feed.item.urn = dc.identifier.urn. The result don't come anywhere. That field comes with description line. Here's configuration for that which works in right way. webui.feed.item.description = dc.title, dc.contributor.author, dc.contributor.tiedekunta, dc.contributor.laitos, dc.creator, dcterms.abstract, dc.identifier.urn It would be easier to parse output, every field has it's own xml-tag, not all the fields combined. Any suggestions, what I have done or understood wrong? My original purpose is make searches from our university intranet web server to DSpace and show results in that web server, not in DSpace. Is this the right way to handle that? Our DSpace version is 1.6.2 Example search could be search http://dspace.cc.tut.fi/dpub/open-search/?query=author:Varjonenformat=atom, and here is result for one item: entry titlePikakarbonatisoitu betoni korroosioympäristönä/title link href=http://dspace.cc.tut.fi/dpub/handle/123456789/5922; rel=alternate/ author nameVarjonen, Saija/name /author idhttp://dspace.cc.tut.fi/dpub/handle/123456789/5922/id updated2010-06-30T11:58:44Z/updated published2001-12-11T22:00:00Z/published summary type=textPikakarbonatisoitu betoni korroosioympäristönä Rakennustekniikan osasto Rakennetekniikan laitos, talonrakennustekniikka Varjonen, Saija Betoniterästen korroosio on yleinen vaurioitumisilmiö betoniteollisuudessa. Korroosio voi alkaa, kun teräksen pinnalla oleva oksidikalvo tuhoutuu. Tämä kalvo voi tuhoutua joko kloridien tunkeutumisen tai betoniin karbonatisoitumisen seurauksena. Pikakarbonatisoinnissa kappale asetetaan kaappiin, jossa ilman hiilidioksidipitoisuus on 4 %. Yhden viikon säilytys kaapissa vastaa noin yhden vuoden säilytystä ulkoilmassa. Tavoitteena oli selvittää, mitä eroa on pikakarbonatisoituneella ja luonnollisesti karbonatisoituneella betonilla korroosion etenemien kannalta. Koekappaleiden alkalisuuden vähenemistä tutkittiin pH-indikaatoreilla, pH-mitarilla sekä huokosvesitutkimuksilla. Kokeissa selvitettiin myös lämpötilan ja kosteuspitoisuuksien vaikutus korroosioon. Karbonatisoitumisen vaikutusta betonin tiiviyteen tutkittiin vedenimukokeilla, kuppikokeilla ja elohopeaporisimetrialla. Luonnollisesti ja nopeutetusti karbonatisoituneiden kappaleiden välillä havaittiin pieniä eroavaisuuksia. Käytettäessä nopeutettua karbonatisointia tulee tutkimustuloksiin suhtautua pienellä varauksella. Betoniterästen korroosio oli tämän tutkimuksen mukaan luonnollisen karbonatisoitumisen yhteydessä nopeampaa kuin käytettäessä pikakarbonatisointia. /Kir10 URN:NBN:fi:tty-200907106762 /summary dc:date2001-12-11T22:00:00Z/dc:date /entry -- Tapani Lehtilä, Tampere University of Technology / Library tapani.leht...@tut.fi +358 40 849 0208 P.O.Box 537, 33101 Tampere Finland Street address: Korkeakoulunkatu 10, 33720 Tampere, Finland -- Gaining the trust of online customers is vital for the success of any company that requires sensitive data to be transmitted over the Web. Learn how to best implement a security strategy that keeps consumers' information secure and instills the confidence they need to proceed with transactions. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Online Document Viewer Functionality
Would it seem ungrateful if I suggest that the first thing we need is some more descriptive terms? Because to me, document viewer is so generic as to be nearly meaningless. o xdvi is a document viewer o mplayer is a document viewer o GPhoto is a document viewer o Audacious is a document viewer o 'info' and 'man' are document viewers o 'less' is a document viewer What kind(s) of documents are we talking about here? What specific needs do we identify which are unmet by existing helper applications? Specific needs mentioned so far: o PDF documents are capable of random access (when linearized), but Adobe Reader assumes you will want the whole document eventually, whereas small references to a large document would be best served if it could be told to only fetch pages on demand. o Maps are big but screens are small. There is a need to express the idea that an image should be shown pixel-for-pixel regardless of size, under a scrollable viewport. Sometimes it's most appropriate to view photographs at full resolution, too. Others? -- Mark H. Wood, Lead System Programmer mw...@iupui.edu Asking whether markets are efficient is like asking whether people are smart. pgpfrNiv0hu1M.pgp Description: PGP signature -- Gaining the trust of online customers is vital for the success of any company that requires sensitive data to be transmitted over the Web. Learn how to best implement a security strategy that keeps consumers' information secure and instills the confidence they need to proceed with transactions. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Privileges in top-level communities and lower-level communities
If I'm not mistaken, I believe this is an issue in 1.5.1 also. We have a user who has Admin privileges on a certain collection, yet she is unable to add a bitstream to an item in that collection unless I give her Administrator privileges on the entire repository (which of course I don't want to do). Sue Sue Walker-Thornton Software Developer/Database Administrator NASA Langley Research Center|LITES Contract (757) 224-4074 -Original Message- From: Tim Donohue [mailto:tdono...@duraspace.org] Sent: Monday, January 10, 2011 12:39 PM To: Mark Melia Cc: dspace-tech@lists.sourceforge.net Subject: Re: [Dspace-tech] Privileges in top-level communities and lower-level communities Mark, Aha. Now I understand. This is a reported issue with 1.6.2: https://jira.duraspace.org/browse/DS-678 I'd encourage you to add your additional comments to that issue, and/or 'vote' for that issue. Unfortunately this is a known issue at this time (and still exists in 1.7.0). We need to find a developer to work on this issue and provide a patch which resolves it. - Tim On 1/10/2011 11:21 AM, Mark Melia wrote: Hi Tim, To give a little more details what I am trying to do: A user who is a community admin is trying to add a bitstream to an item. This item has up to now no bitstreams. When she opens the upload a new bitstream page the only type of bundle she is presented with is License. Upon further investigation I have found in the addBundleOption in AddBitstreamForm.java if there are no bundles the user must be authorized as an administrator. This is checked by AuthorizeManager.isAdmin. This checks is the user is a system admin. In this case my user is only a community admin and is therefore not shown the bundle types. Now the question is - is this logically correct? Thanks for all your pointers on this. Mark On 10/01/11 15:59, Tim Donohue wrote: Hi Mark, As far as I'm aware, this should be functioning properly in DSpace 1.6.0 or above. At least we've had no other reports of bugs in this area, from what I can find. Can you provide us with more information about your setup? Are you running XMLUI or JSPUI? If XMLUI, what Theme are you using (and have you customized the theme)? Have you made any other major customizations/changes which could be affecting this? As of DSpace 1.6.0, DSpace now has a new Delegate Admins feature, which improves the inheritance of Admin rights, and lets you more easily control what individual Administrations can and cannot do. You also may want to check your 'dspace.cfg' to see if you've changed the default settings for Community Administrators. Look for this section: # Authorization system configuration - Delegate ADMIN # By default, the contents of that configuration section are commented out. This defaults to allowing a Community Admins perform all actions on any Sub-Community, Collection or Item in their Community. If you've customized these settings in any way, this obviously will affect what a Community Administrator can do. - Tim On 1/10/2011 9:46 AM, Mark Melia wrote: Hi Tim, Thanks for getting back to me. I am running DSpace 1.6.2. Thanks, Mark On 10/01/11 15:43, Tim Donohue wrote: Hi Mark, DSpace is supposed to inherit Admin permissions automatically. So, if you are an Admin of a Community, it also means you should be an Admin of all Sub-Communities, Collections or Items within that Community. Can you let us know what version of DSpace are you using? It's possible you may be running into a bug in an old version of DSpace. - Tim On 1/10/2011 8:32 AM, Mark Melia wrote: Hi all, Perhaps a better example might help here. I have a top level community - Faculty of Engineering and Computing - in this community there is a sub-community - School of Civil Engineering. The faculty dean has administrative privileges on the collections directly in the Faculty community but these privileges do not seem to extend on down to the School of Civil Engineering collections. Does anyone know if this is how DSpace is meant to behave. I would appreciate any information on this. Thanks in advance, Mark On 06/01/11 14:21, Mark Melia wrote: Hi all, I am trying to specify user privileges at a top level community and have those privileges for users using sub-communities within the top level community. So for example if I am admin in topLevelCommunity1 and communityA is in topLevelCommunity1 I should have admin privileges in communityA. This does not appear to be the case for me. Does anyone have any idea how to rectify this? Thanks, Mark -- Learn how Oracle Real Application Clusters (RAC) One Node allows customers to consolidate database storage, standardize their database environment, and, should the need arise, upgrade to a full multi-node Oracle RAC database without downtime or disruption
Re: [Dspace-tech] Online Document Viewer Functionality
I looked at several Fedora Commons instances and some have a nice PDF reader displaying individual pages and navigation, which also has a zoom option. Is this a standard part of FC? Could this be easily used in DSpace? Regards, ~~helix84 -- Protect Your Site and Customers from Malware Attacks Learn about various malware tactics and how to avoid them. Understand malware threats, the impact they can have on your business, and how you can protect your company and customers by using code signing. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Online Document Viewer Functionality
helix84, Fedora Commons is more of a flexible repository architecture than an out-of-the-box repository application. As such, it doesn't come with a standard user interface solution. That's the main difference between a system like DSpace and one like Fedora. However, there are several third-party user interfaces that have been built for Fedora Commons. It's possible one of these does come with a PDF reader (I'm actually not sure, but I could ask around). A full list of all End User applications that work on Fedora is here: https://wiki.duraspace.org/display/FEDORACREATE/Complete+Solutions So, we'd need to determine what end user application those sites are using that you are talking about. Then we could investigate what PDF reader they may be using, and whether it is available as an open source tool. - Tim On 1/11/2011 10:07 AM, helix84 wrote: I looked at several Fedora Commons instances and some have a nice PDF reader displaying individual pages and navigation, which also has a zoom option. Is this a standard part of FC? Could this be easily used in DSpace? Regards, ~~helix84 -- Protect Your Site and Customers from Malware Attacks Learn about various malware tactics and how to avoid them. Understand malware threats, the impact they can have on your business, and how you can protect your company and customers by using code signing. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech -- Protect Your Site and Customers from Malware Attacks Learn about various malware tactics and how to avoid them. Understand malware threats, the impact they can have on your business, and how you can protect your company and customers by using code signing. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Discovery plug-in reorder for 1.70
Hi Kevin
Finally I think that I understood what're you telling: The main idea
is that I will not find any xsl template for discovery inside the
actual xsl's mirage theme distribution and I should include one for
customizing the facets appeareance.
I've tested looking for
dri:li...@id='aspect.discovery.SimpleSearch.list.discovery'] and it's
seems to be a good point of interception but it applies only in a
search context, actually I have the requirement to delete facets from
home page entirely and show it only when the user has performed a
search. To accomplish this, should I touch the xsl and look for
another aspect, for instance Navigation, or should I see the
sitemap.xmap from resources/aspects/Discovery source and recompile?
Thank you very much for the help
Germán
On Wed, Jan 5, 2011 at 7:47 AM, Kevin Van de velde ke...@mire.be wrote:
Hi Germán,
What I would do is duplicate any xsl you would want to alter from the
navigation.xsl, paste these in {your.theme}.xsl and alter them there.
By doing it this way it is much easier to keep track of your changes.
best regards,
Kevin Van de Velde
@mire - www.atmire.com
533 2nd Street - Encinitas, CA 92024 - USA
Technologielaan 9 - 3001 Heverlee - Belgium
http://www.atmire.com - Institutional Repository Solutions
http://www.togather.eu - Before getting together, get t...@ther
On 4 January 2011 22:49, Germán Biozzoli germanbiozz...@gmail.com wrote:
Thank you very much Kevin
Perhaps my question is very basic, I've created my own theme copying
mirage theme, you're suggesting that I should modify navigation.xsl or
create a new xsl for the facets? I simply need to reorder the section
upside statistics or login section in navigation bar.
Regards
Germán
On Tue, Jan 4, 2011 at 1:36 PM, Kevin Van de velde ke...@mire.be wrote:
Hi Germán,
The reason why you can't find the xsl is because there is no special xsl
to
render the discovery navigation.
So what I would suggest is that you create your own template in xsl to
do
this, just take a look at the DRI from dspace demo site:
http://demo.dspace.org/xmlui/DRI/discover and you will find that the
sidebar
is rendered in a list with id
'aspect.discovery.SimpleSearch.list.discovery'.
Below is a small example on how to place the discovery sidebar in a
couple
of divisions.
xsl:template
match=dri:li...@id='aspect.discovery.SimpleSearch.list.discovery']
div id=div1
div id=div2
xsl:apply-templates/
/div
/div
/xsl:template
I hope I was able to solve your problem.
best regards,
Kevin Van de Velde
@mire - www.atmire.com
533 2nd Street - Encinitas, CA 92024 - USA
Technologielaan 9 - 3001 Heverlee - Belgium
http://www.atmire.com - Institutional Repository Solutions
http://www.togather.eu - Before getting together, get t...@ther
On 4 January 2011 16:47, Germán Biozzoli germanbiozz...@gmail.com
wrote:
Hi people
The users that I'm working for with DSpace 1.70, requested to me to
re-order the discovery plug-in facets to show it more easily to the
final users. They find that are in some way forgotten in the last
position and they wish to see it at first or second division in
navigation bar. I've tried to look in the mirage xsls or
dri2xhtml_alt's but it's seems to be solved in the aspect instance,
somebody could give me a clue to fullfill this request?
Thanks a lot
Germán
--
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to consolidate database storage, standardize their database
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Re: [Dspace-tech] Online Document Viewer Functionality
On Tue, Jan 11, 2011 at 17:16, Tim Donohue tdono...@duraspace.org wrote: Fedora Commons is more of a flexible repository architecture than an out-of-the-box repository application. As such, it doesn't come with a standard user interface solution. That's the main difference between a system like DSpace and one like Fedora. Thanks, I didn't know that. These are the ones I've seen. Both are nice. https://fedora.phaidra.univie.ac.at/fedora/get/o:9479/bdef:Book/view# http://collections.nlm.nih.gov/pageturner/viewer.html?PID=nlm:nlmuid-64750960R-bk Regards, ~~helix84 -- Protect Your Site and Customers from Malware Attacks Learn about various malware tactics and how to avoid them. Understand malware threats, the impact they can have on your business, and how you can protect your company and customers by using code signing. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
[Dspace-tech] Fwd: Failing compilation on debian lenny, PostgreSQL 8.3.12, libpg-java 8.2-504-2, java version 1.6.0_20, tomcat 5.5
Previous message not sent to the ml -- Forwarded message -- From: Kocisky koci...@autistici.org Date: 10 January 2011 15:12 Subject: Re: [Dspace-tech] Failing compilation on debian lenny, PostgreSQL 8.3.12, libpg-java 8.2-504-2, java version 1.6.0_20, tomcat 5.5 To: Tim Donohue tdono...@duraspace.org Dear Tim, i've tried to install the last version of java (directly from the oracle site and not the version on the debian repository) but got the same problem. below the error log you can also verify the versions of the applications required by dspace (from the doc). I've tried also with another environment (MacOSX 10.6.6) with the latest tomcat 6.0.29 and postgreSQL 9.0 but had the same error (check the tread: Syntax error on ant fresh_install with dspace 1.7.0 in the same ml). i didn't really understood where the postgres/JDBC connector resides and which version is compatible... since i'm not confident with this environment i dont even know how to follow the code, should i post it on the dev mailing list ? thank you! K dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# java -version java version 1.6.0_23 Java(TM) SE Runtime Environment (build 1.6.0_23-b05) Java HotSpot(TM) Client VM (build 19.0-b09, mixed mode, sharing) dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# ant -version Apache Ant version 1.7.0 compiled on April 29 2008 dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# mvn -version Maven version: 2.0.9 Java version: 1.6.0_22 OS name: linux version: 2.6.26-2-686 arch: i386 Family: unix dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# psql --version psql (PostgreSQL) 8.3.12 contains support for command-line editing dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# perl -version This is perl, v5.10.0 built for i486-linux-gnu-thread-multi Copyright 1987-2007, Larry Wall Perl may be copied only under the terms of either the Artistic License or the GNU General Public License, which may be found in the Perl 5 source kit. Complete documentation for Perl, including FAQ lists, should be found on this system using man perl or perldoc perl. If you have access to the Internet, point your browser at http://www.perl.org/, the Perl Home Page. [] [INFO] Copying files to /home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir [INFO] [INFO] [INFO] [INFO] Reactor Summary: [INFO] [INFO] DSpace Addon Modules .. SUCCESS [10.229s] [INFO] DSpace XML-UI (Manakin) :: Web Application SUCCESS [29.401s] [INFO] DSpace LNI :: Web Application . SUCCESS [9.994s] [INFO] DSpace OAI :: Web Application . SUCCESS [8.520s] [INFO] DSpace JSP-UI :: Web Application .. SUCCESS [7.514s] [INFO] DSpace SWORD :: Web Application ... SUCCESS [9.485s] [INFO] DSpace SOLR :: Web Application SUCCESS [20.712s] [INFO] DSpace Assembly and Configuration . SUCCESS [59.814s] [INFO] [INFO] [INFO] BUILD SUCCESSFUL [INFO] [INFO] Total time: 2 minutes 36 seconds [INFO] Finished at: Mon Jan 10 14:37:19 EST 2011 [INFO] Final Memory: 40M/97M [INFO] dev:/home/user/Desktop/dspace-1.7.0-release/dspace# cd /home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# java -version java version 1.6.0_23 Java(TM) SE Runtime Environment (build 1.6.0_23-b05) Java HotSpot(TM) Client VM (build 19.0-b09, mixed mode, sharing) dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# ls bin build.xml CHANGES config docs etc KNOWN_BUGS lib LICENSE README solr webapps dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# ant fresh_install Buildfile: build.xml init_installation: [mkdir] Created dir: /usr/local/dspace/bin [mkdir] Created dir: /usr/local/dspace/config [mkdir] Created dir: /usr/local/dspace/lib [mkdir] Created dir: /usr/local/dspace/etc [mkdir] Created dir: /usr/local/dspace/webapps [mkdir] Created dir: /usr/local/dspace/exports
Re: [Dspace-tech] Failing compilation on debian lenny, PostgreSQL 8.3.12, libpg-java 8.2-504-2, java version 1.6.0_20, tomcat 5.5
Hi Tim, thank you for your reply, i've followed your suggestions but didn't got many results, see below: DSpace 1.7 actually comes packaged with the PostgreSQL JDBC driver it needs to use. You do not need to install a separate JDBC driver (in fact, you may want to remove what you installed, to make sure it doesn't cause any conflicts). great, i've removed that package The full installation prerequisites instructions are at: https://wiki.duraspace.org/display/DSDOC/Installation i was following the doc in the pkg, thanks also for this ! Also be aware that you will need Maven 2.2.x or above to properly build DSpace 1.7.0. We've discovered an error in builds with Maven 2.0.x -- see the above link for more details (look under the prerequisites software section) i'm now using apache-maven 3.0.1 but have the same syntax problem, see below Your version of Maven actually may be part of the problem. After the Maven build, it seems you don't receive a full summary of all modules being built properly. Double check that you are running 'mvn package' from the [dspace-src]/dspace/ directory. The results of a successful build should report similar to this (notice how many more modules were built -- you only had 8 listed in your logs below): maybe i have less packages because i'm not compiling the source but the slim package with pre-compiled modules? here the last build with maven version: [INFO] Copying 1394 files to /home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir [INFO] [INFO] Reactor Summary: [INFO] [INFO] DSpace Addon Modules .. SUCCESS [0.385s] [INFO] DSpace XML-UI (Manakin) :: Web Application SUCCESS [7.276s] [INFO] DSpace LNI :: Web Application . SUCCESS [4.203s] [INFO] DSpace OAI :: Web Application . SUCCESS [4.589s] [INFO] DSpace JSP-UI :: Web Application .. SUCCESS [5.691s] [INFO] DSpace SWORD :: Web Application ... SUCCESS [4.986s] [INFO] DSpace SOLR :: Web Application SUCCESS [10.092s] [INFO] DSpace Assembly and Configuration . SUCCESS [44.539s] [INFO] [INFO] BUILD SUCCESS [INFO] [INFO] Total time: 1:22.092s [INFO] Finished at: Tue Jan 11 15:12:14 EST 2011 [INFO] Final Memory: 10M/26M [INFO] dev:/home/user/Desktop/dspace-1.7.0-release/dspace# cd /home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# ls bin build.xml CHANGES config docs etc KNOWN_BUGS lib LICENSE README solr webapps dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# ant fresh_install Buildfile: build.xml init_installation: init_configs: [copy] Copying 1 file to /usr/local/dspace/config test_database: [java] 2011-01-11 15:12:49,705 INFO org.dspace.core.ConfigurationManager @ Loading system provided config property (-Ddspace.configuration): config/dspace.cfg [java] 2011-01-11 15:12:49,724 INFO org.dspace.core.ConfigurationManager @ Using default log4j provided log configuration,if unintended, check your dspace.cfg for (log.init.config) [java] [java] Attempting to connect to database: [java] - URL: jdbc:postgresql://localhost:5432/dspace [java] - Driver: org.postgresql.Driver [java] - Username: postgres [java] - Password: zsx [java] - Schema: dspace [java] [java] Testing connection... [java] Connected successfully! [java] setup_database: [java] 2011-01-11 15:12:51,258 INFO org.dspace.core.ConfigurationManager @ Loading system provided config property (-Ddspace.configuration): config/dspace.cfg [java] 2011-01-11 15:12:51,264 INFO org.dspace.core.ConfigurationManager @ Using default log4j provided log configuration,if unintended, check your dspace.cfg for (log.init.config) [java] 2011-01-11 15:12:51,264 INFO org.dspace.storage.rdbms.InitializeDatabase @ Initializing Database [java] 2011-01-11 15:13:01,503 INFO org.dspace.core.ConfigurationManager @ Loading system provided config property (-Ddspace.configuration): config/dspace.cfg [java] 2011-01-11 15:13:01,509 INFO org.dspace.core.ConfigurationManager @ Using default log4j provided log configuration,if unintended, check your dspace.cfg for (log.init.config) [java] Started: 1294776781495 [java] Ended: 1294776782197 [java] Elapsed time: 0 secs (702 msecs) load_registries: [java] 2011-01-11 15:13:02,426 INFO org.dspace.core.ConfigurationManager @ Loading system provided config property (-Ddspace.configuration): config/dspace.cfg [java]
[Dspace-tech] Question about the version of JAVA needed for DSpace 1.7
Hi, We are in the process of implementing DSpace 1.7. The DSpace documentation for version 1.7 says: “DSpace now requires Oracle Java 6 or greater because of usage of new language capabilities introduced in 5 and 6 that make coding easier and cleaner….. Only Oracle's Java has been tested with each release and is known to work correctly. Other flavors of Java may pose problems.” We are currently running DSpace 1.5.1 on a Sun Solaris 10 Unix machine and our current version of JAVA is: java version 1.6.0_07 Java(TM) SE Runtime Environment (build 1.6.0_07-b06) Java HotSpot(TM) Server VM (build 10.0-b23, mixed mode) Do we need a different version of JAVA? The link in the DSpace doc takes us to an Oracle.com download page where it points to: Java SE 6 Update 23 I guess I’m confused by the language, “other flavors of Java….” since I didn’t realize there was any other Java than Oracle Java….??? Thanks in advance, Sue Sue Walker-Thornton Software Developer/Database Administrator NASA Langley Research Center|LITES Contract SGT, Inc.|130 Research Drive Hampton, Va. 23666 Office: (757) 224-4074 Mobile: (757) 506-9903 Fax: (757) 224-4001 susan.m.thorn...@nasa.gov inline: image001.jpg-- Protect Your Site and Customers from Malware Attacks Learn about various malware tactics and how to avoid them. Understand malware threats, the impact they can have on your business, and how you can protect your company and customers by using code signing. http://p.sf.net/sfu/oracle-sfdevnl___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Question about the version of JAVA needed for DSpace 1.7
I think thats trying to say we don't recommend the OpenJDK, since it doesn't have all of the proprietary performance enhancements that come in Sun/Oracle's flavor. java version 1.6.0_07 That is Java 6. The version number meant by saying Java 6, means the minor version number. Java 5 would have been 1.5.x_y. So your Java version is fine for DSpace 1.7 -- Peter Dietz Systems Developer/Engineer Ohio State University Libraries On Tue, Jan 11, 2011 at 4:14 PM, Thornton, Susan M. (LARC-B702)[LITES] susan.m.thorn...@nasa.gov wrote: Hi, We are in the process of implementing DSpace 1.7. The DSpace documentation for version 1.7 says: “DSpace now requires *Oracle *Java 6 or greater because of usage of new language capabilities introduced in 5 and 6 that make coding easier and cleaner….. Only Oracle's Java has been tested with each release and is known to work correctly. Other flavors of Java may pose problems.” We are currently running DSpace 1.5.1 on a Sun Solaris 10 Unix machine and our current version of JAVA is: java version 1.6.0_07 Java(TM) SE Runtime Environment (build 1.6.0_07-b06) Java HotSpot(TM) Server VM (build 10.0-b23, mixed mode) Do we need a different version of JAVA? The link in the DSpace doc takes us to an Oracle.com download page where it points to: Java SE 6 Update 23 I guess I’m confused by the language, “other flavors of Java….” since I didn’t realize there was any other Java than Oracle Java….??? Thanks in advance, Sue * * * * *Sue Walker-Thornton* *Software Developer/Database Administrator* *NASA Langley Research Center|LITES Contract* *SGT, Inc.|130 Research Drive* *Hampton, Va. 23666* *Office: (757) 224-4074* *Mobile: (757) 506-9903* *Fax: (757) 224-4001* *susan.m.thorn...@nasa.gov* -- Protect Your Site and Customers from Malware Attacks Learn about various malware tactics and how to avoid them. Understand malware threats, the impact they can have on your business, and how you can protect your company and customers by using code signing. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech image001.jpg-- Protect Your Site and Customers from Malware Attacks Learn about various malware tactics and how to avoid them. Understand malware threats, the impact they can have on your business, and how you can protect your company and customers by using code signing. http://p.sf.net/sfu/oracle-sfdevnl___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Question about the version of JAVA needed for DSpace 1.7
Hi Sue, On 12/01/11 10:14, Thornton, Susan M. (LARC-B702)[LITES] wrote: We are currently running DSpace 1.5.1 on a Sun Solaris 10 Unix machine and our current version of JAVA is: java version 1.6.0_07 Java(TM) SE Runtime Environment (build 1.6.0_07-b06) Java HotSpot(TM) Server VM (build 10.0-b23, mixed mode) Do we need a different version of JAVA? The link in the DSpace doc takes us to an Oracle.com download page where it points to: Java SE 6 Update 23 I guess I’m confused by the language, “other flavors of Java….” since I didn’t realize there was any other Java than Oracle Java….??? You should be fine with the version you have. There are a bunch of third-party implementations of the Java language specs (mostly from before the time that Sun/Oracle released their implementation under a license that is considered 'open enough'). Have a look here if you want to know more: http://en.wikipedia.org/wiki/Java_(software_platform)#Licensing cheers, Andrea -- Andrea Schweer IRR Technical Specialist, ITS Information Systems The University of Waikato, Hamilton, New Zealand -- Protect Your Site and Customers from Malware Attacks Learn about various malware tactics and how to avoid them. Understand malware threats, the impact they can have on your business, and how you can protect your company and customers by using code signing. http://p.sf.net/sfu/oracle-sfdevnl ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech
Re: [Dspace-tech] Failing compilation on debian lenny, PostgreSQL 8.3.12, libpg-java 8.2-504-2, java version 1.6.0_20, tomcat 5.5
Hi Kocisky, Your Maven build part is working properly. I didn't notice you were using the 'dspace-1.7.0-release' version (which has pre-compiled code, and therefore responds as having built fewer modules). I had thought you were still using the 'dspace-1.7.0-src-release' version. Here's something else you can try: (1) From [dspace-src]/dspace/ run this command: 'mvn clean package' (WARNING: this will first delete the entire /target/dspace-1.7.0-build.dir , before it rebuilds DSpace.) (2) After DSpace has been rebuilt, edit the following configuration file: [dspace-src]/dspace/target/dspace-1.7.0-build.dir/config/log4j-console.properties In that text file, temporarily change the following line: log4j.rootCategory=INFO, A1 Replace INFO with DEBUG like this: log4j.rootCategory=DEBUG, A1 This changes the logging mode to debug. That means that the DSpace installer will now report a lot more information to you about what is going on while DSpace is being installed. (3) Finally, re-run the 'ant fresh_install' command. This time, you should see a ton of extra information be logged to your command line (since you are now in debug mode). Once it errors out again, please email us the lines just *before* that error message. This time, those lines should include extra information on what is happening and what exact command the install process is failing on. Hopefully this extra information can help us figure out what could be going wrong in your DSpace installation. - Tim On 1/11/2011 2:31 PM, Kocisky wrote: Hi Tim, thank you for your reply, i've followed your suggestions but didn't got many results, see below: DSpace 1.7 actually comes packaged with the PostgreSQL JDBC driver it needs to use. You do not need to install a separate JDBC driver (in fact, you may want to remove what you installed, to make sure it doesn't cause any conflicts). great, i've removed that package The full installation prerequisites instructions are at: https://wiki.duraspace.org/display/DSDOC/Installation i was following the doc in the pkg, thanks also for this ! Also be aware that you will need Maven 2.2.x or above to properly build DSpace 1.7.0. We've discovered an error in builds with Maven 2.0.x -- see the above link for more details (look under the prerequisites software section) i'm now using apache-maven 3.0.1 but have the same syntax problem, see below Your version of Maven actually may be part of the problem. After the Maven build, it seems you don't receive a full summary of all modules being built properly. Double check that you are running 'mvn package' from the [dspace-src]/dspace/ directory. The results of a successful build should report similar to this (notice how many more modules were built -- you only had 8 listed in your logs below): maybe i have less packages because i'm not compiling the source but the slim package with pre-compiled modules? here the last build with maven version: [INFO] Copying 1394 files to /home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir [INFO] [INFO] Reactor Summary: [INFO] [INFO] DSpace Addon Modules .. SUCCESS [0.385s] [INFO] DSpace XML-UI (Manakin) :: Web Application SUCCESS [7.276s] [INFO] DSpace LNI :: Web Application . SUCCESS [4.203s] [INFO] DSpace OAI :: Web Application . SUCCESS [4.589s] [INFO] DSpace JSP-UI :: Web Application .. SUCCESS [5.691s] [INFO] DSpace SWORD :: Web Application ... SUCCESS [4.986s] [INFO] DSpace SOLR :: Web Application SUCCESS [10.092s] [INFO] DSpace Assembly and Configuration . SUCCESS [44.539s] [INFO] [INFO] BUILD SUCCESS [INFO] [INFO] Total time: 1:22.092s [INFO] Finished at: Tue Jan 11 15:12:14 EST 2011 [INFO] Final Memory: 10M/26M [INFO] dev:/home/user/Desktop/dspace-1.7.0-release/dspace# cd /home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# ls bin build.xmlCHANGES config docs etc KNOWN_BUGS lib LICENSE README solr webapps dev:/home/user/Desktop/dspace-1.7.0-release/dspace/target/dspace-1.7.0-build.dir# ant fresh_install Buildfile: build.xml init_installation: init_configs: [copy] Copying 1 file to /usr/local/dspace/config test_database: [java] 2011-01-11 15:12:49,705 INFO org.dspace.core.ConfigurationManager @ Loading system provided config property (-Ddspace.configuration): config/dspace.cfg [java] 2011-01-11 15:12:49,724 INFO
Re: [Dspace-tech] Failing compilation on debian lenny, PostgreSQL 8.3.12, libpg-java 8.2-504-2, java version 1.6.0_20, tomcat 5.5
Tim, i think that the DEBUG flag is not helping us much, in the mean while i've tried also to update ant to 1.8.2 but nothing... should we enable other debug flags? maybe in org.postgresql.util package ? thank you, K [java] 2011-01-11 17:19:37,432 DEBUG org.dspace.storage.rdbms.DatabaseManager @ Running query CREATE INDEX bi_4_dis_value_idx ON bi_4_dis(value) with parameters: [java] 2011-01-11 17:19:37,433 DEBUG org.dspace.storage.rdbms.DatabaseManager @ Running query CREATE INDEX bi_4_dis_uvalue_idx ON bi_4_dis(UPPER(value)) with parameters: [java] 2011-01-11 17:19:37,435 DEBUG org.dspace.storage.rdbms.DatabaseManager @ Running query CREATE INDEX bi_4_dmap_item_id_idx ON bi_4_dmap(item_id) with parameters: [java] 2011-01-11 17:19:37,436 DEBUG org.dspace.storage.rdbms.DatabaseManager @ Running query CREATE INDEX bi_4_dmap_dist_idx ON bi_4_dmap(distinct_id) with parameters: [java] Started: 1294784376950 [java] Ended: 1294784377438 [java] Elapsed time: 0 secs (488 msecs) load_registries: [java] 2011-01-11 17:19:38,273 INFO org.dspace.core.ConfigurationManager @ Loading system provided config property (-Ddspace.configuration): config/dspace.cfg [java] 2011-01-11 17:19:38,281 INFO org.dspace.core.ConfigurationManager @ Using default log4j provided log configuration,if unintended, check your dspace.cfg for (log.init.config) [java] 2011-01-11 17:19:39,283 DEBUG org.dspace.storage.rdbms.DatabaseManager @ Running query INSERT INTO bitstreamformatregistry ( ) VALUES ( ) RETURNING null [java] 2011-01-11 17:19:39,292 FATAL org.dspace.administer.RegistryLoader @ anonymous::error_loading_registries: [java] org.postgresql.util.PSQLException: ERROR: syntax error at or near ) [java] at org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecutorImpl.java:1531) [java] at org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:1313) [java] at org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:188) [java] at org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:452) [java] at org.postgresql.jdbc2.AbstractJdbc2Statement.executeWithFlags(AbstractJdbc2Statement.java:354) [java] at org.postgresql.jdbc2.AbstractJdbc2Statement.executeQuery(AbstractJdbc2Statement.java:258) [java] at org.apache.commons.dbcp.DelegatingPreparedStatement.executeQuery(DelegatingPreparedStatement.java:96) [java] at org.apache.commons.dbcp.DelegatingPreparedStatement.executeQuery(DelegatingPreparedStatement.java:96) [java] at org.apache.commons.dbcp.DelegatingPreparedStatement.executeError: [java] - ERROR: syntax error at or near ) [java] Query(DelegatingPreparedStatement.java:96) [java] at org.dspace.storage.rdbms.DatabaseManager.doInsertPostgres(DatabaseManager.java:1755) [java] at org.dspace.storage.rdbms.DatabaseManager.insert(DatabaseManager.java:675) [java] at org.dspace.storage.rdbms.DatabaseManager.create(DatabaseManager.java:451) [java] at org.dspace.content.BitstreamFormat.create(BitstreamFormat.java:403) [java] at org.dspace.administer.RegistryLoader.loadFormat(RegistryLoader.java:172) [java] at org.dspace.administer.RegistryLoader.loadBitstreamFormats(RegistryLoader.java:138) [java] at org.dspace.administer.RegistryLoader.main(RegistryLoader.java:75) BUILD FAILED /home/user/Desktop/dspace-1.7.0-src-release/dspace/target/dspace-1.7.0-build.dir/build.xml:809: Java returned: 1 Total time: 13 seconds On 11 January 2011 16:31, Tim Donohue tdono...@duraspace.org wrote: Hi Kocisky, Your Maven build part is working properly. I didn't notice you were using the 'dspace-1.7.0-release' version (which has pre-compiled code, and therefore responds as having built fewer modules). I had thought you were still using the 'dspace-1.7.0-src-release' version. Here's something else you can try: (1) From [dspace-src]/dspace/ run this command: 'mvn clean package' (WARNING: this will first delete the entire /target/dspace-1.7.0-build.dir , before it rebuilds DSpace.) (2) After DSpace has been rebuilt, edit the following configuration file: [dspace-src]/dspace/target/dspace-1.7.0-build.dir/config/log4j-console.properties In that text file, temporarily change the following line: log4j.rootCategory=INFO, A1 Replace INFO with DEBUG like this: log4j.rootCategory=DEBUG, A1 This changes the logging mode to debug. That means that the DSpace installer will now report a lot more information to you about what is going on while DSpace is being installed. (3) Finally, re-run the 'ant fresh_install' command. This time, you should see a ton of extra information be logged to your command line (since you are now in debug mode). Once it errors out again, please email us the lines just *before* that error message. This time, those lines should
Re: [Dspace-tech] Failing compilation on debian lenny, PostgreSQL 8.3.12, libpg-java 8.2-504-2, java version 1.6.0_20, tomcat 5.5
Kocisky,
Actually those logs are helpful. It shows me that for some reason your
install process is not able to load data into your
'bitstreamformatregistry' table.
Can you check to make sure this table is created properly in your DB?
It should be created with the following columns:
bitstream_format_id integer NOT NULL,
mimetype character varying(256),
short_description character varying(128),
description text,
support_level integer,
internal boolean
You also may want to look at your PostgreSQL log files, to see if it has
reported any errors.
From your logged output, it looks like DSpace is not able to determine
the columns in this 'bitstreamformatregistry' table. That's why you see:
[java] 2011-01-11 17:19:39,283 DEBUG
org.dspace.storage.rdbms.DatabaseManager @ Running query INSERT INTO
bitstreamformatregistry ( ) VALUES ( ) RETURNING null
In a successful install, you should instead see a long listing of
similar INSERT queries, which look like this:
[java] 2011-01-11 16:58:27,896 DEBUG
org.dspace.storage.rdbms.DatabaseManager @ Running query INSERT INTO
bitstreamformatregistry (
mimetype,short_description,description,support_level,bitstream_format_id,internal)
VALUES ( ?,?,?,?,getnextid('bitstreamformatregistry'),?) RETURNING
bitstream_format_id
These insert queries should be run for *every* entry in the
dspace/config/registries/bitstream-formats.xml file. Unfortunately,
your install process is erroring out on the first insert, which likely
means something may be wrong with your database or your database (db.*)
settings in the dspace.cfg.
Let us know what you find out!
- Tim
On 1/11/2011 4:35 PM, Kocisky wrote:
Tim, i think that the DEBUG flag is not helping us much, in the mean
while i've tried also to update ant to 1.8.2 but nothing...
should we enable other debug flags? maybe in org.postgresql.util package ?
thank you,
K
[java] 2011-01-11 17:19:37,432 DEBUG
org.dspace.storage.rdbms.DatabaseManager @ Running query CREATE INDEX
bi_4_dis_value_idx ON bi_4_dis(value) with parameters:
[java] 2011-01-11 17:19:37,433 DEBUG
org.dspace.storage.rdbms.DatabaseManager @ Running query CREATE INDEX
bi_4_dis_uvalue_idx ON bi_4_dis(UPPER(value)) with parameters:
[java] 2011-01-11 17:19:37,435 DEBUG
org.dspace.storage.rdbms.DatabaseManager @ Running query CREATE INDEX
bi_4_dmap_item_id_idx ON bi_4_dmap(item_id) with parameters:
[java] 2011-01-11 17:19:37,436 DEBUG
org.dspace.storage.rdbms.DatabaseManager @ Running query CREATE INDEX
bi_4_dmap_dist_idx ON bi_4_dmap(distinct_id) with parameters:
[java] Started: 1294784376950
[java] Ended: 1294784377438
[java] Elapsed time: 0 secs (488 msecs)
load_registries:
[java] 2011-01-11 17:19:38,273 INFO
org.dspace.core.ConfigurationManager @ Loading system provided config
property (-Ddspace.configuration): config/dspace.cfg
[java] 2011-01-11 17:19:38,281 INFO
org.dspace.core.ConfigurationManager @ Using default log4j provided
log configuration,if unintended, check your dspace.cfg for
(log.init.config)
[java] 2011-01-11 17:19:39,283 DEBUG
org.dspace.storage.rdbms.DatabaseManager @ Running query INSERT INTO
bitstreamformatregistry ( ) VALUES ( ) RETURNING null
[java] 2011-01-11 17:19:39,292 FATAL
org.dspace.administer.RegistryLoader @
anonymous::error_loading_registries:
[java] org.postgresql.util.PSQLException: ERROR: syntax error at
or near )
[java] at
org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse(QueryExecutorImpl.java:1531)
[java] at
org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:1313)
[java] at
org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:188)
[java] at
org.postgresql.jdbc2.AbstractJdbc2Statement.execute(AbstractJdbc2Statement.java:452)
[java] at
org.postgresql.jdbc2.AbstractJdbc2Statement.executeWithFlags(AbstractJdbc2Statement.java:354)
[java] at
org.postgresql.jdbc2.AbstractJdbc2Statement.executeQuery(AbstractJdbc2Statement.java:258)
[java] at
org.apache.commons.dbcp.DelegatingPreparedStatement.executeQuery(DelegatingPreparedStatement.java:96)
[java] at
org.apache.commons.dbcp.DelegatingPreparedStatement.executeQuery(DelegatingPreparedStatement.java:96)
[java] at
org.apache.commons.dbcp.DelegatingPreparedStatement.executeError:
[java] - ERROR: syntax error at or near )
[java] Query(DelegatingPreparedStatement.java:96)
[java] at
org.dspace.storage.rdbms.DatabaseManager.doInsertPostgres(DatabaseManager.java:1755)
[java] at
org.dspace.storage.rdbms.DatabaseManager.insert(DatabaseManager.java:675)
[java] at
org.dspace.storage.rdbms.DatabaseManager.create(DatabaseManager.java:451)
[java] at
org.dspace.content.BitstreamFormat.create(BitstreamFormat.java:403)
[java] at
