date:20141202

Re: [Dspace-tech] Issues with OpenSearch sortFields and sorting order

2014-12-02 Thread Christian Scheible

> Hi,
>
> I'm playing with OpenSearch in DSpace 4.2 and I'm having a couple of 
> issues.  I see OpenSearch uses the Discovery configuration, so I'm 
> investigating `discovery.xml'.  Here are two related issues I'm having:
>
> 1- I've added a custom sortField for dc.date.accessioned and added it 
> to my bean's sortFields, but I can't figure out how to use it.  
> OpenSearch has a `sort_by' parameter which only takes an integer; how 
> do I know which integer to use?
>
> 2- If I use `sort_by=2` it appears to be sorting by dc.date.issued, 
> but in ascending order, even though `discovery.xml' lists "desc" as 
> the default sort order everywhere in the config.
>
> We're trying to piggy back on OpenSearch to build custom RSS feeds for 
> certain terms, so we can use a feed aggregator to send email alerts 
> when there are new items.  Unfortunately it's quite pointless if we 
> can't customize the field to sort by or see the newest items first in 
> the feed!
>
> Our application stack is: DSpace 4.2, Tomcat 7, Oracle Java 7, Ubuntu 
> 14.04.
>
> Thank you,
>
> Alan


Hi Alan,

OpenSearch is using the dspace.cfg not discovery.xml and sorting options 
are defined like that:

webui.itemlist.sort-option.1 = dateissued:dc.date.issued:date
webui.itemlist.sort-option.2 = dateaccessioned:dc.date.accessioned:date

The sort-option and the order can be defined with get parameters like this
&sort_by=1&order=DESC

Best

-- 
Christian Scheible
Softwareentwickler / Abt. Content-basierte Dienste
Kommunikations-, Informations- und Medienzentrum (KIM)
Universität Konstanz
78457 Konstanz
+49 (0)7531 / 88-2857
Raum B 703


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[Dspace-tech] New user registration reg.

2014-12-02 Thread ribin . jones

Hi all,

I have dspace 4 up and running in Linux 14.04 LTS. I need some customizations 
to be done.

I need to collect more information from a person who is registering in dspace. 
Right now, we just have First Name, Last Name and Contact Telephone. I need to 
have more fields and also make it mandatory to fill in. Which is the file I 
should edit for this? 

Thanks in advance,

Ribin Jones S.B 


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Re: [Dspace-tech] Urgent: database layer spontaneously closing connections(…)

2014-12-02 Thread Christian Völker

Hello Stuart,

thanks for response.

Am 02.12.2014 um 19:43 schrieb Stuart Yeates :

>> Although my postgresql is in standard configuration running autovacuum 
>> regularly, I did a manual vacuum full and a reindex database and reindex 
>> system for the dspace database yesterday. These jobs finished fast without 
>> problems. The snippet of the logfile above was recorded after this 
>> maintainance.
> 
> (a) have you cheaked the operating system logs for evidence of disk 
> corruption? ('dmesg' in the case of linux)

I would not know how exactly this would look in dmesg, however, I found nothing 
alarming. 
Here is a short snippet I guess to be relevant.

[1.788926] sd 2:0:1:0: [sdb] Assuming drive cache: write through
[1.788996] sd 2:0:1:0: [sdb] Attached SCSI disk
[1.886328] EXT4-fs (dm-0): mounted filesystem with ordered data mode. Opts: 
(null)
[3.839917] Adding 4190204k swap on /dev/mapper/esxh--15-swap_1.  
Priority:-1 extents:1 across:4190204k 
[3.847649] ADDRCONF(NETDEV_UP): eth0: link is not ready
[3.854768] udevd[330]: starting version 175
[3.891588] lp: driver loaded but no devices found
[3.906648] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro
[4.042432] init: portmap-wait (statd) main process (393) killed by TERM 
signal

This is VM-Ware ESX Virtual machine on physical host not under my direct 
control. I havent ever noticed any resource shortcomings. There is either 
sufficient disk space, RAM und cpu available.

> (b) is postgres configured to be utf-8?

The configuration has not changed within at least half a year (tomcat) or two 
years in case of postgres respectively.

   Name|  Owner   | Encoding |   Collate   |Ctype|   Access 
privileges   
---+--+--+-+-+---
 dspace| postgres | UTF8 | de_DE.UTF-8 | de_DE.UTF-8 | 



Meanwhile, I have managed to reproduce the db connection error with this simple 
command:

/srv/dspace> bin/dspace test-database

Attempting to connect to database: 
 - URL: jdbc:postgresql://localhost:5432/dspace
 - Driver: org.postgresql.Driver
 - Username: dspace
 - Password: B7c3nEN5
 - Schema: null

Testing connection...
Connected successfully!


/srv/dspace# tail -n1 /var/log/postgresql/postgresql-9.1-main.log
2014-12-02 20:38:03 CET LOG:  unexpected EOF on client connection


Here are the corresponding lines from dspace.log.2014-12-02:

2014-12-02 20:37:54,529 INFO  org.dspace.usage.LoggerUsageEventListener @ 
anonymous:session_id=09A36205C9F2829E4B5B1E8EDAE0DC61:ip_addr=66.249.78.193:view_bitstream:bitstream_id=29870
2014-12-02 20:37:55,340 INFO  org.dspace.usage.LoggerUsageEventListener @ 
anonymous:session_id=CAD1BA058DE25F60C838A52F1A5EAEA8:ip_addr=66.249.78.186:view_item:handle=2339/875
2014-12-02 20:38:00,814 INFO  org.dspace.core.ConfigurationManager @ Loading 
from classloader: file:/srv/dspace/config/dspace.cfg
2014-12-02 20:38:00,832 INFO  org.dspace.core.ConfigurationManager @ Using 
dspace provided log configuration (log.init.config)
2014-12-02 20:38:00,832 INFO  org.dspace.core.ConfigurationManager @ Loading: 
/srv/dspace/config/log4j.properties
2014-12-02 20:38:07,563 INFO  org.dspace.usage.LoggerUsageEventListener @ 
anonymous:session_id=1F75DD2F249867FD40DD717CCE4D118D:ip_addr=157.55.39.94:view_bitstream:bitstream_id=22317
2014-12-02 20:38:10,385 INFO  org.dspace.usage.LoggerUsageEventListener @ 
anonymous:session_id=223CF7F693A11CE3527C5230AB202506:ip_addr=66.249.78.186:view_item:handle=2339/1282


The log4j.properties have been set to DEBUG for the A1 appender.
Huge amounts of DEBUG messages are found in the dspace log when issuing 
something like bin/dspace filter-media or bin/dspace itemcounter.
Changing settings in the log4j-console.properties does not have an effect.
I also set the cocoon logging settings to DEBUG, but got no useful messages at 
the same time in the cocoon logfile.

I does not make sense to me, that DSpace says everything is fine 
while the database contemplates a stale connection, abandoned by tomcat.



I have checked that the current jdbc connector postgresql-9.1-903.jdbc4.jar is 
available in /srv/dspace/lib, 
where /srv/dspace is the working directory of my dspace installation. 
I have also made sure, that this is the only jdbc connector there.
I mention this because there was an elder connector 
postgresql-8.1-408.jdbc3.jar besides the current connector.
I dont know the rules how connectors are matched, but I just wanted to be sure.
I checked the same two conditions within each WEB-INF/lib under 
/var/lib/tomcat7/webapps/*.
I restarted completely after cleaning out the old jdbc connector files.


I lowered and raised the db.maxconnections setting from 30 to 5 and to 80. 
I restarted tomcat7 each time and did my test running bin/dspace itemcounter 
and checking the postgresql logfile afterwords.
I had the "unexpected EOF on client connection" messages in the postgresql log 
regardless of this sett

Re: [Dspace-tech] How to develop manually for importing an item to collection

2014-12-02 Thread Terry Brady

I included an echo of the my "dspace import" parameters.  I did not include
"dspace" in the echo.

In your contents file, try using "bundle:ORIGINAL" instead of "Bundle:
ORIGINAL".

Terry

On Tue, Dec 2, 2014 at 8:58 AM, P.Hadadan (NW) 
wrote:

> Dears,
>
>
>
> Unfortunately I can’t import any Item L.
>
>
>
> After unsuccessful importing, I do linux Dspace (ubuntu 14.04 LTS,Postgre)
> fresh installation and try it.
>
> Command:
>
>  /dspace/bin/dspace import -a -e knitosp...@gmail.com -c 123456789/8826
> -s /home/administrator/dspace-ingest -m
> /home/administrator/dspace-ingest/Importlog
>
>
>
> Log:
>
> Destination collections:
>
> Owning  Collection: import collection
>
> Adding items from directory: /home/administrator/dspace-ingest
>
> Generating mapfile: /home/administrator/dspace-ingest/Importlog
>
> Started: 1417525165741
>
> Ended: 1417525165941
>
> Elapsed time: 0 secs (200 msecs)
>
>
>
> The line after Generating mapfile… did not appear ! mapfile also is empty
> (size:0). The importing folder attached.
>
>
>
> Terry, Your command did not start by dspace why? What is your dspace
> version? I use dspace-4.2-src-release.
>
>
>
> How to develop manually for importing an item to collection?
>
>
>
>
>
>
>
> *From:* Terry Brady [mailto:terry.br...@georgetown.edu]
> *Sent:* Wednesday, November 26, 2014 7:44 PM
> *To:* P.Hadadan (NW)
> *Subject:* Re: [Dspace-tech] Importing command did not work
>
>
>
> Here are my results (excluding PubMed metadata).  Since I do not have the
> PubMed schema registered, I could not load that file.  I believe you will
> want to name it metadata_PubMed.xml.
>
>
>
> Command: import -a -e terry.br...@georgetown.edu -c 10822.1/707103 -s 
> /var/data/dspace/dspace-ingest/article3 -m 
> /var/www/batch-tools/mapfile/20141125_12.22.51
>
> Destination collections:
>
> Owning  Collection: 2014 October Terry
>
> Adding items from directory: /var/data/dspace/dspace-ingest/article3
>
> Generating mapfile: /var/www/batch-tools/mapfile/20141125_12.22.51
>
> Adding item from directory article
>
> Loading dublin core from 
> /var/data/dspace/dspace-ingest/article3/article/dublin_core.xml
>
> Schema: dc Element: title Qualifier: none Value: Amirkabir 
> International Journal of Electrical _ Electronics Engineering
>
> Schema: dc Element: date Qualifier: issued Value: 2009
>
> Processing contents file: 
> /var/data/dspace/dspace-ingest/article3/article/contents
>
> Bitstream: A Fast Localization and Feature Extract_.pdf  Bundle: 
> ORIGINAL
>
> Bitstream: A Fast Localization and Feature Extract_.xml  Bundle: 
> ORIGINAL
>
> Processing handle file: handle
>
> It appears there is no handle file -- generating one
>
> 0 article
>
>
>
> Here is my ingest folder structure...
>
>
>
> [dspace@dspace-dev-1 ~]$ find /var/data/dspace/dspace-ingest/article3 -type f 
> -p
>
> rint
>
> /var/data/dspace/dspace-ingest/article3/article/A Fast Localization and 
> Feature Extract_.pdf
>
> /var/data/dspace/dspace-ingest/article3/article/A Fast Localization and 
> Feature Extract_.xml
>
> /var/data/dspace/dspace-ingest/article3/article/contents
>
> /var/data/dspace/dspace-ingest/article3/article/dublin_core.xml
>
> I hope this helps.  Once you get one item to load, the rest are very easy!
>
>
>
> Terry
>
>
>
> On Wed, Nov 26, 2014 at 6:09 AM, P.Hadadan (NW) 
> wrote:
>
> By following this step, unfortunately my problem did not solved. Mapfile
> also is empty.
>
> I work on Dspace version 4.2 . how to resolve problem without any log?
> Requires certain settings? Are you using below command?
>
> dspace import --add --eperson=a...@b.com --collection=123456789/74
> --source=c:\Temp\article --mapfile=c:\Impoort
>
> the metadata_[PubMed].xml file contain metadata base on registered schema (
> http://www.ncbi.nlm.nih.gov/corehtml/query/static/PubMed.dtd) for
> concurrent importing, not for add to repository.My reference is
> https://wiki.duraspace.org/display/DSDOC4x/Importing+and+Exporting+Items+via+Simple+Archive+Format
>
>
>
> *From:* Terry Brady [mailto:terry.br...@georgetown.edu]
> *Sent:* Tuesday, November 25, 2014 9:00 PM
> *To:* P.Hadadan (NW); dspace-tech@lists.sourceforge.net
>
>
> *Subject:* Re: [Dspace-tech] Importing command did not work
>
>
>
> I realized that I did not CC the list on my last reply.  I am including
> the list.
>
>
>
> Looking at your sample zip file, I was able to add the item to my test
> repository by making the following changes.
>
>
>
> 1. rename contents.txt to contents
>
> 2. for each line in the contents file, add bundle:ORIGINAL
>
> 3. Make sure that you upload the items in a containing folder (one folder
> per item to be added)
>
> 4. Eliminate the metadata_[PubMed].xml file unless you intend to add it to
> the repository (in which case you will need to add it to contents)
>
>
>
> A Fast Localization and Feature Extract_.pdf bundle:ORIGINAL
>
> A Fast Localization and Feature Extract_.xml bundle:ORIGINAL
>
>
>
> Terr

Re: [Dspace-tech] Urgent: database layer spontaneously closing connections(…)

2014-12-02 Thread Stuart Yeates

> Although my postgresql is in standard configuration running autovacuum 
> regularly, I did a manual vacuum full and a reindex database and reindex 
> system for the dspace database yesterday. These jobs finished fast without 
> problems. The snippet of the logfile above was recorded after this 
> maintainance.

(a) have you cheaked the operating system logs for evidence of disk corruption? 
('dmesg' in the case of linux)

(b) is postgres configured to be utf-8?

cheers
stuart
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[Dspace-tech] Database Query: list of Communities, Collections and Items

2014-12-02 Thread bender

Hi,

I need to obtain report with a complete list of the Communities with their
respective Handle number, and for each Community I need a list of their
Collections, with their respective Handle number, and for each Collection I
need a list of their Items, with their respective Handle number.

Ej:

Community 1, 123456789/1

- Collection 1, 123456789/3

- Item 1, 123456789/40

- Item 2, 123456789/41

- ...

- Collection 2, 123456789/4

- Item 3, 123456789/43

- Item 4, 123456789/44

- ...

- 

Community 2, 123456789/2

- Collection 1, 123456789/10

- Item 5, 123456789/45

- Item 6, 123456789/46

- ...

- Collection 2, 123456789/11

- Item 1, 123456789/47

- Item 2, 123456789/48

- ...

- 


I understand this is only possible with a direct Query to the database.
I've reviewed the ER database model, but I've difficulties to figure out
how to design the query. I'm not an expert and need to get this report as
soon as possible.

Can anyone help me?

Thanks in advance.

Bender
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[Dspace-tech] Issues with OpenSearch sortFields and sorting order

2014-12-02 Thread Alan Orth

Hi,

I'm playing with OpenSearch in DSpace 4.2 and I'm having a couple of
issues.  I see OpenSearch uses the Discovery configuration, so I'm
investigating `discovery.xml'.  Here are two related issues I'm having:

1- I've added a custom sortField for dc.date.accessioned and added it to my
bean's sortFields, but I can't figure out how to use it.  OpenSearch has a
`sort_by' parameter which only takes an integer; how do I know which
integer to use?

2- If I use `sort_by=2` it appears to be sorting by dc.date.issued, but in
ascending order, even though `discovery.xml' lists "desc" as the default
sort order everywhere in the config.

We're trying to piggy back on OpenSearch to build custom RSS feeds for
certain terms, so we can use a feed aggregator to send email alerts when
there are new items.  Unfortunately it's quite pointless if we can't
customize the field to sort by or see the newest items first in the feed!

Our application stack is: DSpace 4.2, Tomcat 7, Oracle Java 7, Ubuntu 14.04.

Thank you,

Alan
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Re: [Dspace-tech] How to develop manually for importing an item to collection

2014-12-02 Thread Pottinger, Hardy J.

Hi, just to add to Claudia's response, you don't have to "go it alone" when 
creating this SAF (Simple Archive Format) structure, there are several very 
nice tools to make this task much easier. Here are two, but I'm sure there are 
more:

http://georgetown-university-libraries.github.io/File-Analyzer/
https://github.com/peterdietz/SAFBuilder
File-Analyzer  is very handy if you're in need of a desktop application to help 
you visualize the process, SAFBuilder is a good fit if you're already in the 
habit of using CSV files for working with metadata.

--Hardy

From: Claudia Jürgen [claudia.juer...@ub.tu-dortmund.de]
Sent: Tuesday, December 02, 2014 8:54 AM
To: dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] How to develop manually for importing an item to 
collection

Hello,

the item importer expects a certain structure for the source (-s) to be
imported. The source specified must contain one directory per item. Your
/home/administrator/dspace-ingest contains the files belonging to a
single import item.

e.g. just create
/home/administrator/dspace-ingest/001
and move the files contained in
/home/administrator/dspace-ingest to
/home/administrator/dspace-ingest/001

Then run the command as you've listed it below an it should work.

Hope this helps

Claudia Jürgen


Am 02.12.2014 um 14:58 schrieb P.Hadadan (NW):
> Dears,
>
> Unfortunately I can’t import any Item ☹.
>
> After unsuccessful importing, I do linux Dspace (ubuntu 14.04 LTS,Postgre) 
> fresh installation and try it.
> Command:
>   /dspace/bin/dspace import -a -e knitosp...@gmail.com -c 123456789/8826 -s 
> /home/administrator/dspace-ingest -m 
> /home/administrator/dspace-ingest/Importlog
>
> Log:
> Destination collections:
> Owning  Collection: import collection
> Adding items from directory: /home/administrator/dspace-ingest
> Generating mapfile: /home/administrator/dspace-ingest/Importlog
> Started: 1417525165741
> Ended: 1417525165941
> Elapsed time: 0 secs (200 msecs)
>
> The line after Generating mapfile… did not appear ! mapfile also is empty 
> (size:0). The importing folder attached.
>
> Terry, Your command did not start by dspace why? What is your dspace version? 
> I use dspace-4.2-src-release.
>
> How to develop manually for importing an item to collection?
>
>
>
> From: Terry Brady [mailto:terry.br...@georgetown.edu]
> Sent: Wednesday, November 26, 2014 7:44 PM
> To: P.Hadadan (NW)
> Subject: Re: [Dspace-tech] Importing command did not work
>
> Here are my results (excluding PubMed metadata).  Since I do not have the 
> PubMed schema registered, I could not load that file.  I believe you will 
> want to name it metadata_PubMed.xml.
>
>
> Command: import -a -e 
> terry.br...@georgetown.edu -c 
> 10822.1/707103 -s /var/data/dspace/dspace-ingest/article3 -m 
> /var/www/batch-tools/mapfile/20141125_12.22.51
>
> Destination collections:
>
> Owning  Collection: 2014 October Terry
>
> Adding items from directory: /var/data/dspace/dspace-ingest/article3
>
> Generating mapfile: /var/www/batch-tools/mapfile/20141125_12.22.51
>
> Adding item from directory article
>
>  Loading dublin core from 
> /var/data/dspace/dspace-ingest/article3/article/dublin_core.xml
>
>  Schema: dc Element: title Qualifier: none Value: Amirkabir 
> International Journal of Electrical _ Electronics Engineering
>
>  Schema: dc Element: date Qualifier: issued Value: 2009
>
>  Processing contents file: 
> /var/data/dspace/dspace-ingest/article3/article/contents
>
>  Bitstream: A Fast Localization and Feature Extract_.pdf  Bundle: 
> ORIGINAL
>
>  Bitstream: A Fast Localization and Feature Extract_.xml  Bundle: 
> ORIGINAL
>
> Processing handle file: handle
>
> It appears there is no handle file -- generating one
>
> 0 article
>
>
>
> Here is my ingest folder structure...
>
>
>
> [dspace@dspace-dev-1 ~]$ find /var/data/dspace/dspace-ingest/article3 -type f 
> -p
>
> rint
>
> /var/data/dspace/dspace-ingest/article3/article/A Fast Localization and 
> Feature Extract_.pdf
>
> /var/data/dspace/dspace-ingest/article3/article/A Fast Localization and 
> Feature Extract_.xml
>
> /var/data/dspace/dspace-ingest/article3/article/contents
>
> /var/data/dspace/dspace-ingest/article3/article/dublin_core.xml
> I hope this helps.  Once you get one item to load, the rest are very easy!
>
> Terry
>
> On Wed, Nov 26, 2014 at 6:09 AM, P.Hadadan (NW) 
> mailto:p.hada...@notionwave.com>> wrote:
> By following this step, unfortunately my problem did not solved. Mapfile also 
> is empty.
> I work on Dspace version 4.2 . how to resolve problem without any log? 
> Requires certain settings? Are you using below command?
> dspace import --add --eperson=a...@b.com 
> --collection=123456789/74 --source=c:\Temp\article --mapfile=c:\Impoort
> the metadata_[PubMed].xml file contain metadata base on registered schema 
> (http://www.ncbi.nlm.nih.gov

Re: [Dspace-tech] How to develop manually for importing an item to collection

2014-12-02 Thread Claudia Jürgen

Hello,

the item importer expects a certain structure for the source (-s) to be 
imported. The source specified must contain one directory per item. Your 
/home/administrator/dspace-ingest contains the files belonging to a 
single import item.

e.g. just create
/home/administrator/dspace-ingest/001
and move the files contained in
/home/administrator/dspace-ingest to
/home/administrator/dspace-ingest/001

Then run the command as you've listed it below an it should work.

Hope this helps

Claudia Jürgen


Am 02.12.2014 um 14:58 schrieb P.Hadadan (NW):
> Dears,
>
> Unfortunately I can’t import any Item ☹.
>
> After unsuccessful importing, I do linux Dspace (ubuntu 14.04 LTS,Postgre) 
> fresh installation and try it.
> Command:
>   /dspace/bin/dspace import -a -e knitosp...@gmail.com -c 123456789/8826 -s 
> /home/administrator/dspace-ingest -m 
> /home/administrator/dspace-ingest/Importlog
>
> Log:
> Destination collections:
> Owning  Collection: import collection
> Adding items from directory: /home/administrator/dspace-ingest
> Generating mapfile: /home/administrator/dspace-ingest/Importlog
> Started: 1417525165741
> Ended: 1417525165941
> Elapsed time: 0 secs (200 msecs)
>
> The line after Generating mapfile… did not appear ! mapfile also is empty 
> (size:0). The importing folder attached.
>
> Terry, Your command did not start by dspace why? What is your dspace version? 
> I use dspace-4.2-src-release.
>
> How to develop manually for importing an item to collection?
>
>
>
> From: Terry Brady [mailto:terry.br...@georgetown.edu]
> Sent: Wednesday, November 26, 2014 7:44 PM
> To: P.Hadadan (NW)
> Subject: Re: [Dspace-tech] Importing command did not work
>
> Here are my results (excluding PubMed metadata).  Since I do not have the 
> PubMed schema registered, I could not load that file.  I believe you will 
> want to name it metadata_PubMed.xml.
>
>
> Command: import -a -e 
> terry.br...@georgetown.edu -c 
> 10822.1/707103 -s /var/data/dspace/dspace-ingest/article3 -m 
> /var/www/batch-tools/mapfile/20141125_12.22.51
>
> Destination collections:
>
> Owning  Collection: 2014 October Terry
>
> Adding items from directory: /var/data/dspace/dspace-ingest/article3
>
> Generating mapfile: /var/www/batch-tools/mapfile/20141125_12.22.51
>
> Adding item from directory article
>
>  Loading dublin core from 
> /var/data/dspace/dspace-ingest/article3/article/dublin_core.xml
>
>  Schema: dc Element: title Qualifier: none Value: Amirkabir 
> International Journal of Electrical _ Electronics Engineering
>
>  Schema: dc Element: date Qualifier: issued Value: 2009
>
>  Processing contents file: 
> /var/data/dspace/dspace-ingest/article3/article/contents
>
>  Bitstream: A Fast Localization and Feature Extract_.pdf  Bundle: 
> ORIGINAL
>
>  Bitstream: A Fast Localization and Feature Extract_.xml  Bundle: 
> ORIGINAL
>
> Processing handle file: handle
>
> It appears there is no handle file -- generating one
>
> 0 article
>
>
>
> Here is my ingest folder structure...
>
>
>
> [dspace@dspace-dev-1 ~]$ find /var/data/dspace/dspace-ingest/article3 -type f 
> -p
>
> rint
>
> /var/data/dspace/dspace-ingest/article3/article/A Fast Localization and 
> Feature Extract_.pdf
>
> /var/data/dspace/dspace-ingest/article3/article/A Fast Localization and 
> Feature Extract_.xml
>
> /var/data/dspace/dspace-ingest/article3/article/contents
>
> /var/data/dspace/dspace-ingest/article3/article/dublin_core.xml
> I hope this helps.  Once you get one item to load, the rest are very easy!
>
> Terry
>
> On Wed, Nov 26, 2014 at 6:09 AM, P.Hadadan (NW) 
> mailto:p.hada...@notionwave.com>> wrote:
> By following this step, unfortunately my problem did not solved. Mapfile also 
> is empty.
> I work on Dspace version 4.2 . how to resolve problem without any log? 
> Requires certain settings? Are you using below command?
> dspace import --add --eperson=a...@b.com 
> --collection=123456789/74 --source=c:\Temp\article --mapfile=c:\Impoort
> the metadata_[PubMed].xml file contain metadata base on registered schema 
> (http://www.ncbi.nlm.nih.gov/corehtml/query/static/PubMed.dtd) for concurrent 
> importing, not for add to repository.My reference is 
> https://wiki.duraspace.org/display/DSDOC4x/Importing+and+Exporting+Items+via+Simple+Archive+Format
>
> From: Terry Brady 
> [mailto:terry.br...@georgetown.edu]
> Sent: Tuesday, November 25, 2014 9:00 PM
> To: P.Hadadan (NW); 
> dspace-tech@lists.sourceforge.net
>
> Subject: Re: [Dspace-tech] Importing command did not work
>
> I realized that I did not CC the list on my last reply.  I am including the 
> list.
>
> Looking at your sample zip file, I was able to add the item to my test 
> repository by making the following changes.
>
> 1. rename contents.txt to contents
> 2. for each line in the contents file, add bundle:ORIGINAL
> 3. Mak

[Dspace-tech] Urgent: database layer spontaneously closing connections(…)

2014-12-02 Thread Christian Völker

Hello,

the impact of this issue seems to be severe in our case:
Please have a look at this item:

compared to any other item in our DSpace, such as:

Obviously, we have lost most of the metadata for the first item during 
insertion in our database!

Even required fields got lost like dc.contributor.author or dc.type. This means 
that the item will not be indexed, not be shown e.g. while browsing by type or 
when using faceted search. Obviously with this little metadata, it will also 
hardly be visible when searching by Google.

So far I have lowered drastically the cycle of thumbnail generation, but 
honestly, this is solution is neither sufficient nor satisfactory. I think 
whether I should close login to avoid partial input altogether. But as I have 
no idea as of how to fix the issue, it is also a tough decision to spoil our 
users timetable, especially, when they have promised to fulfill a certain 
amount of work until the end of the year.

My postgresql logfile looks like this:

2014-12-02 04:00:10 CET LOG:  unexpected EOF on client connection
2014-12-02 08:00:05 CET LOG:  unexpected EOF on client connection
2014-12-02 08:00:05 CET LOG:  unexpected EOF on client connection
2014-12-02 08:01:15 CET LOG:  unexpected EOF on client connection
2014-12-02 08:01:15 CET LOG:  unexpected EOF on client connection
2014-12-02 10:00:09 CET LOG:  unexpected EOF on client connection
2014-12-02 10:00:09 CET LOG:  unexpected EOF on client connection
2014-12-02 10:00:11 CET LOG:  unexpected EOF on client connection
2014-12-02 10:00:11 CET LOG:  unexpected EOF on client connection
2014-12-02 10:01:14 CET LOG:  unexpected EOF on client connection
2014-12-02 10:01:14 CET LOG:  unexpected EOF on client connection
2014-12-02 12:00:05 CET LOG:  unexpected EOF on client connection
2014-12-02 12:00:05 CET LOG:  unexpected EOF on client connection
2014-12-02 12:01:13 CET LOG:  unexpected EOF on client connection
2014-12-02 12:01:13 CET LOG:  unexpected EOF on client connection

Four entries every even hour means that I have two interruptions in database 
connection for each run of filter-media and itemcounter. Six such events at ten 
o'clock are caused by a third batch running at that time, generate-sitemaps, 
while update-discovery-index at four o'clock causes a single interruption.

I dont know exactly when this has started. I dont look to these logs routinely 
and removal of old logs follows default rules. I can see now that it was at 
least the case since September, but nobody ever noticed any malfunction.

Although my postgresql is in standard configuration running autovacuum 
regularly, I did a manual vacuum full and a reindex database and reindex system 
for the dspace database yesterday. These jobs finished fast without problems. 
The snippet of the logfile above was recorded after this maintainance.

Please suggest on appropriate measures.

Thanks, Christian

Am 01.12.2014 um 14:23 schrieb Christian Völker :

> Hello,
> 
> has this issue ever been solved?
> 
> I encounter it here with DSpace 1.8.3 and Postgres 9.1
> 
> Thanks, Christian
> 
> 
> Am 31.01.2012 um 15:59 schrieb Tim Donohue :
> 
>> Rui,
>> 
>> Sorry, I haven't gotten any further with this issue.
>> 
>> Does anyone else on this list have any ideas here?  Anyone else 
>> encountering this issue on either 1.7.x or 1.8.x, or find a way to 
>> resolve it?
>> 
>> - Tim
>> 
>> On 1/31/2012 6:28 AM, Rui Ramos wrote:
>>> Tim Hi,
>>> 
>>> Have you manage to solve this issue ?
>>> I have the same problem and from the logs it seams the Database resets
>>> the connection.
>>> 
>>> Dspace - 1.7.2
>>> PostgreSQL- 8.4.9
>>> 
>>> Any ideias ?
>>> 
>>> On Fri, 2011-12-09 at 10:58 -0600, Tim Donohue wrote:
 Actually, looking at these error messages a bit more closely, this may
 be entirely unrelated. It could be an XMLUI specific issue, rather than
 a database layer issue that you are seeing.

 - Tim

 On 12/9/2011 10:54 AM, Tim Donohue wrote:
> Hi Mark,
> 
> Unfortunately, I don't have an answer for you. But, digging around I
> noticed a similar oddity on demo.dspace.org. On demo.dspace.org we're
> getting some similar sorts of SocketException errors (though"broken
> pipe"  rather than"socket closed") in the dspace.log files, but these
> are from the XMLUI.
> 
> demo.dspace.org is currently running:
> * DSpace 1.8.0
> * PostgreSQL 8.4.2
> * Tomcat 6.0.29
> * Java 1.6.0_24
> 
> The error on demo.dspace.org is a"ClientAbortException:
> java.net.SocketException: Broken pipe"  (in XMLUI), which is caused by an
> underlying"java.net.SocketException: Broken pipe". Not the same error,
> but eerily similar. The XMLUI seems to handle it in stride, but it does
> cause frequent lines like this to appear in the logs:
> 
> 2011-12-09 10:51:48,663 ERROR

Re: [Dspace-tech] ant fresh_ install

2014-12-02 Thread helix84

Please, don't cross-post. This question belongs only to dspace-tech.

In the first screenshot, the DB server is not listenting on the
hostname and port you specified in dspace.cfg or may be blocked by a
firewall.

In the second screenshot, it's supposed to be "ant fresh_install", not
"ant fresh_ install" (remove the space).


Regards,
~~helix84

Compulsory reading: DSpace Mailing List Etiquette
https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette

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Re: [Dspace-tech] problem with facet, solr seprator \n|||\n

2014-12-02 Thread Pablo Buenaposada

nothing?



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Re: [Dspace-tech] Issues with OpenSearch sortFields and sorting order

[Dspace-tech] New user registration reg.

Re: [Dspace-tech] Urgent: database layer spontaneously closing connections(…)

Re: [Dspace-tech] How to develop manually for importing an item to collection

Re: [Dspace-tech] Urgent: database layer spontaneously closing connections(…)

[Dspace-tech] Database Query: list of Communities, Collections and Items

[Dspace-tech] Issues with OpenSearch sortFields and sorting order

Re: [Dspace-tech] How to develop manually for importing an item to collection

Re: [Dspace-tech] How to develop manually for importing an item to collection

[Dspace-tech] Urgent: database layer spontaneously closing connections(…)

Re: [Dspace-tech] ant fresh_ install

Re: [Dspace-tech] problem with facet, solr seprator \n|||\n

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