[DuMuX] Flyspray Activity for Task 207 (Modularize non-isothermal capabilities)
THIS IS AN AUTOMATED MESSAGE, DO NOT REPLY. The following task has a new comment added: FS#207 - Modularize non-isothermal capabilities User who did this - Alexander Kissinger (alexk) -- I implemented a general non-isothermal equation (local thermodynamic equilibrium) which can be used with most implicit models (Richards, 1p, 1p2c, 2p, 2p2c, 3p, 3p3c). In dumux-devel/dumux/implicit/nonisothermal you will find the implementation of the general non-isothermal equation. I also setup a model which is similar to the 1p2c model (dumux-devel/dumux/implicit/1p2cni) except that some additional property defaults and properties have been added (changes in 1p2cniproperties.hh and 1p2cnipropertydefaults.hh) and a test case ((dumux-devel/test/implicit/1p2cni/). In the test you simply have to state whether your problem type tag inherits from OnePTwoC or OnePTwoCNI in order to add the energy equation. These changes could easily be implemented in a similar manner in the other models. 2pni, 2p2cni, 3p3cni could then be deprecated. -- More information can be found at the following URL: http://www.dumux.org/flyspray/index.php?do=detailstask_id=207#comment398 You are receiving this message because you have requested it from the Flyspray bugtracking system. If you did not expect this message or don't want to receive mails in future, you can change your notification settings at the URL shown above. ___ Dumux mailing list Dumux@listserv.uni-stuttgart.de https://listserv.uni-stuttgart.de/mailman/listinfo/dumux
Re: [DuMuX] SuperLU and UG version
Dear DuMux and Christoph, Thanks a lot for your help. We finally installed DuMux with all necessary modules (using gcc4.8). Just for Information : we also tried to install Dumux using Intel 2013 as compiler. The installation was successful, however, we obtained these errors while compiling test_box1pwithamg : icpc -DHAVE_CONFIG_H -I. -I../../.. -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-common-2.2.1 -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-geometry-2.2.1 -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-grid-2.2.1 -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-localfunctions-2.2.1 -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-istl-2.2.1 -DENABLE_POSIX_CLOCK -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-pdelab-1.1.0 -I/software/MPI/openmpi/1.6.4_intel/include -pthread -DMPIPP_H -DENABLE_MPI=1 -I/software/misc-libs/gmp/5.1.3_intel/include -DENABLE_GMP=1 -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-common-2.2.1 -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-geometry-2.2.1 -DGRIDDIM=0 -DWORLDDIM=0 -DNOGRID -I/software/MPI/openmpi/1.6.4_intel/include -pthread -DMPIPP_H -DENABLE_MPI=1 -I/rap/clumeq/apps/dumux-2.4.0-intel/ugrid/include/ug -DENABLE_UG -DModelP -I/software/MPI/openmpi/1.6.4_intel/include -pthread -DMPIPP_H -DENABLE_MPI=1 -I/software/misc-libs/alugrid/1.52_intel/include -I/software/misc-libs/alugrid/1.52_intel/include/serial -I/software/misc-libs/alugrid/1.52_intel/include/duneinterface -DENABLE_ALUGRID -I/software/misc-libs/alugrid/1.52_intel/include/parallel -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-grid-2.2.1 -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-localfunctions-2.2.1 -I/software/misc-libs/SuperLU/4.3_intel/include -DENABLE_SUPERLU -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-istl-2.2.1 -DENABLE_POSIX_CLOCK -I/rap/clumeq/apps/dumux-2.4.0-intel/dune-pdelab-1.1.0 -DNDEBUG=1 -fPIC -O3 -xHost -no-prec-div -fno-strict-aliasing -MT test_box1pwithamg.o -MD -MP -MF .deps/test_box1pwithamg.Tpo -c -o test_box1pwithamg.o test_box1pwithamg.cc /rap/clumeq/apps/dumux-2.4.0-intel/dune-common-2.2.1/dune/common/fvector.hh( 20): warning #1224: #warning directive: The FieldVector class exports its size by the enum member 'size'. This behavior is deprecated. In the future, 'size' will be a method, which puts it in compliance with the stl conventions. To enable the new behavior (and get rid of this warning), build your Dune with --enable-fieldvector-size-is-method. If you do need the vector size as an enum, use 'dimension'. #warning The FieldVector class exports its size by the enum member 'size'. \ ^ /software/misc-libs/alugrid/1.52_intel/include/serial/parallel.h(43): error: vector is not a template typedef vector SmallObjectStream BufferType; ^ /software/misc-libs/alugrid/1.52_intel/include/serial/parallel.h(43): error: identifier SmallObjectStream is undefined typedef vector SmallObjectStream BufferType; ^ /software/misc-libs/alugrid/1.52_intel/include/parallel/gitter_pll_impl.h(15 94): error: incomplete type is not allowed return accessPllX ().lockedAgainstCoarsening () ; ^ /rap/clumeq/apps/dumux-2.4.0-intel/dune-grid-2.2.1/dune/grid/alugrid/3d/alu3 dinclude.hh(106): error: namespace ALUGridSpace has no member ElementPllXIF_t typedef ALU3DSPACE ElementPllXIF_t PllElementType; ^ /rap/clumeq/apps/dumux-2.4.0-intel/dune-grid-2.2.1/dune/grid/alugrid/3d/alu3 diterators.hh(718): error: incomplete type is not allowed pair ElementPllXIF_t *, int p = it.item ().accessPllX ().accessOuterPllX () ; ^ /rap/clumeq/apps/dumux-2.4.0-intel/dune-grid-2.2.1/dune/grid/alugrid/3d/alu3 diterators.hh(720): error: pointer to incomplete class type is not allowed p.first-getAttachedElement(elems); ^ /rap/clumeq/apps/dumux-2.4.0-intel/dune-grid-2.2.1/dune/grid/alugrid/3d/alu3 diterators.hh(736): error: incomplete type is not allowed pair ElementPllXIF_t *, int p = out.item ().accessPllX ().accessOuterPllX () ; ^ /rap/clumeq/apps/dumux-2.4.0-intel/dune-grid-2.2.1/dune/grid/alugrid/3d/alu3 diterators.hh(738): error: pointer to incomplete class type is not allowed p.first-getAttachedElement(elems); ^ /rap/clumeq/apps/dumux-2.4.0-intel/dune-grid-2.2.1/dune/grid/alugrid/3d/alu3 diterators.hh(811): error: incomplete type is not allowed pair ElementPllXIF_t *, int p = it_-item ().accessPllX ().accessOuterPllX () ; ^ /rap/clumeq/apps/dumux-2.4.0-intel/dune-grid-2.2.1/dune/grid/alugrid/3d/alu3 diterators.hh(813): error: pointer to incomplete class type is not allowed p.first-getAttachedElement(p2); ^ ../../../dumux/implicit/common/implicitvelocityoutput.hh(28): catastrophic error: cannot open source file unordered_map #include unordered_map Best regards Ali NOWAMOOZ
[DuMuX] DuMuX with Intel compiler
Hi Ali, as the Intel compiler is not officially supported in Dune 2.2 and I never tried one myself, it could be possible that you have to fix some issues yourself. From your output I would advise you to do: - use --enable-fieldvector-size-is-method in your configure flags. This will reduce the warnings and switch off the Dune 2.1 behavior. In Dune 2.3 this will be default. - I am not sure about the errors from ALUGrid. The error message is not very helpful without investigating the code more than I did. - The catastrophic error about the missing unordered_map is related to the not enabled C++11 support. You have to add -std=c++11 to the compile flags. dune-common tries to detect this, but in Dune 2.2 only -std=c++0x is tested that does not work with Intel. Either add -std=c++11 to the CXX_FLAGS or replace the file m4/cxx0x_compiler.m4 with the one from dune-common's master where the test is exted to -std=c++11. When you use C++11 with ipcp, you might run into this bug: https://dune-project.org/flyspray/index.php?do=detailstask_id=1228project=1 If this is the case, you can use the code from the bug tracker's last comment (from Markus). I would like to get feedback, whether this solved the bug for you. Bye Christoph -- Une science n'était vraiment développée que quand elle pouvait utiliser les mathématiques.(Paul Lafargue) * CMWR 2014: 10th - 13th June 2014 in Stuttgart Please visit www.cmwr14.de * ___ Dumux mailing list Dumux@listserv.uni-stuttgart.de https://listserv.uni-stuttgart.de/mailman/listinfo/dumux
