Re: [O] [BUG] gnuplot with dates from a table dosn't work anymore
Hi Nicolas · Nicolas Goaziou m...@nicolasgoaziou.fr wrote: Thomas Holst thomas.ho...@de.bosch.com writes: after a pull from this weekend generating plots with gnuplot does not work anymore. It was working perfectly before the pull. I get an error message saying: org-babel-gnuplot-quote-timestamp-field: Wrong type argument: stringp, nil [ ... sinp ...] It should be fixed. Thank you for reporting it. thank you for the quick fix. It works like a charm. -- Mit freundlichen Grüßen / Best regards Thomas Holst
Re: [O] You don't like the HTML export; well, that could change!
Fabrice Niessen fni-news-TA4HMoP+1wHrZ44/dzw...@public.gmane.org writes: Hello, I'm announcing the release of Bigblow, a CSS + JS theme for the Org HTML exports. To use it in your own files, adding these lines should make it: #+HTML_HEAD: link rel=stylesheet type=text/css href=http://www.pirilampo.org/styles/bigblow/css/htmlize.css/ #+HTML_HEAD: link rel=stylesheet type=text/css href=http://www.pirilampo.org/styles/bigblow/css/bigblow.css/ #+HTML_HEAD: link rel=stylesheet type=text/css href=http://www.pirilampo.org/styles/bigblow/css/hideshow.css/ #+HTML_HEAD: script type=text/javascript src=http://www.pirilampo.org/styles/bigblow/js/jquery-1.11.0.min.js;/script #+HTML_HEAD: script type=text/javascript src=http://www.pirilampo.org/styles/bigblow/js/jquery-ui-1.10.2.min.js;/script #+HTML_HEAD: script type=text/javascript src=http://www.pirilampo.org/styles/bigblow/js/jquery.localscroll-min.js;/script #+HTML_HEAD: script type=text/javascript src=http://www.pirilampo.org/styles/bigblow/js/jquery.scrollTo-1.4.3.1-min.js;/script #+HTML_HEAD: script type=text/javascript src=http://www.pirilampo.org/styles/bigblow/js/jquery.zclip.min.js;/script #+HTML_HEAD: script type=text/javascript src=http://www.pirilampo.org/styles/bigblow/js/bigblow.js;/script #+HTML_HEAD: script type=text/javascript src=http://www.pirilampo.org/styles/bigblow/js/hideshow.js;/script If you clone my repo from GitHub [1], it can become as easy as adding just one line: #+SETUPFILE: path/to/Git/repo/setup/bigblow-pirilampo.setup Thanks for this - this is awesome. I love it and I am going to use it! One addition: the template also works with svg files, depending on browser. Cheers, Rainer (PS- It would be very nice if we could add http references here! Then, there would even be no need to copy the files locally...) Test it on your files, or look at the video I posted on YouTube to see what it looks like: https://www.youtube.com/watch?v=DnSGSiXYuOk Best regards, Fabrice PPS- I will still make some changes in a couple of days, like renaming the files so that they have a version number, but that I'll warn you when I'll get this done. [1] https://github.com/fniessen/org-html-themes -- Rainer M. Krug email: Raineratkrugsdotde PGP: 0x0F52F982 pgpk6NRy1Dxdv.pgp Description: PGP signature
Re: [O] Cooperating with oneself using the cloud?
On Monday, 15 Sep 2014 at 19:23, Eric Abrahamsen wrote: [...] Another option would be getting a mini home server that sits in a closet and is always on. That solves the BitTorrent Sync problem, and you'll suddenly find it's good for a bunch of other stuff as well: backups, music, printing, other torrents, LAN filesharing... Both options are annoying in their own way, but once you've got something up and running, you'll be pleased! +1 I use git to store all my org files to my own server. I use an old netbook as the personal cloud server. Works like a charm! You can also buy dedicated units from many companies, including Western Digital for instance. -- : Eric S Fraga (0xFFFCF67D), Emacs 24.4.50.1, Org release_8.3beta-320-gb5c9de signature.asc Description: PGP signature
[O] Scope of properties as variables for babel blocks
#+title: Scope of properties as variables for babel blocks * Overview I have the following scenario in mind: =func1= and =func2= are two functions that can be executed in two modes: =foo= and =bar=. Each mode yields a different set of results, that have to be discussed, separately, in two different subtrees. The goal is to have one subtree where they are executed in one mode and a second subtree for the other mode. The functions are defined in a dedicated [[Code][subtree]]. * Bar setting Now, I want to execute the function in =bar= mode: #+PROPERTY: var mode=bar #+CALL: func1() #+RESULTS: : default #+CALL: func2() #+RESULTS: : default * Foo setting In this node I want to execute the functions in =foo= mode: #+PROPERTY: var mode=foo #+CALL: func1() #+RESULTS: : default #+CALL: func2() #+RESULTS: : default * Code #+name: func1 #+begin_src python return mode #+end_src #+RESULTS: func1 : foo #+name: func2 #+begin_src python return mode #+end_src #+RESULTS: func2 : default-val * Question: How can I implement this kind of workflow in a reproducible org mode document?
Re: [O] org-mode-hook not called when entering org files
Nick Dokos ndo...@gmail.com writes: hob...@poukram.net (Rémi Letot) writes: Nick Dokos ndo...@gmail.com writes: hob...@poukram.net (Rémi Letot) writes: all org seems to work fine, but for some reason org-mode-hook is not called when I open an org file... That's very unlikely: the hook is run using a general emacs mechanism, so if it were broken, a *lot* of things would be broken. You can check with (setq org-mode-hook nil) (add-hook 'org-mode-hook (function (lambda () (message RL - my org-mode-hook ran this emacs -Q, copied your instructions in scratch buffer and C-x C-e them both, then opened my test.org file, and nothing happened. Not sure where you get your org-mode, but unless you are using the org-mode that was bundled with your emacs, this may not be enough: you might have to do some org-mode initialization (hence the suggestion for a minimal .emacs file below). That's the org-mode bundled with my emacs: Org-mode version 8.2.6 (release_8.2.6-1 @ /usr/share/emacs/24.4.50/lisp/org/) GNU Emacs 24.4.50.1 (x86_64-pc-linux-gnu, GTK+ Version 3.12.2) of 2014-08-23 on gkar, modified by Debian it seems that emacs -Q is enough to get org-mode working since opening an org file does trigger the error below :-) ... My advice would be to leave org-crypt to one side until you can get the simpler test above to pass. ok Now I noticed a message that I have received for some times when I open an org file: File mode specification error: (error `recenter'ing a window that does not display current-buffer.) I didn't notice it before since it has happened for quite some times and didn't appear to cause any problem, but could it be the cause of this problem ? perhaps in a minimal .emacs, and then opening a foo.org file (assuming your auto-mode-alist is set up correctly). auto-mode-alist does include org-mode for org files. Any idea ? is the error message that I receive a possible cause ? Yes, it might: Eric Fraga reported a problem where an error that's caught causes buffer initialization to not run the hook: http://thread.gmane.org/gmane.emacs.orgmode/90711 That *might* happen with your error too, although I cannot find the error message either in current org-mode or current-emacs. Maybe I'm looking in the wrong place, but which version of org-mode and which version of emacs are you running? See above, that's org currently bundled with emacs. I could be coerced to try trunk if it has a chance to solve the problem and the test is of some use to you, but then i have some docs to read first :-) Thanks, -- Rémi
Re: [O] Cooperating with oneself using the cloud?
Along the lines of what Bruno suggested, at least these two services also claim to be encrypted locally (so during transit through the net and while on their servers things are always encrypted): https://mega.co.nz/ http://www.wuala.com/ In fact, for files that you really want to be kept private a paranoid setup could involve encrypting the org file with pgp[1] AND then sharing it via one of the cloud services that say things are encrypted there. Note, though, that many people report that those two (and spideroak) are not as fast as dropbox and/or not as easy to setup. Best, R. [1] Either a mechanism somewhat like Thierry suggested or a mechanism like the one, now incorporate into org (I think) and that was started with this thread from Jorge Alfaro: http://lists.gnu.org/archive/html/emacs-orgmode/2014-05/msg00422.html On Mon, 15-09-2014, at 16:51, Bruno Bigras bigras.br...@gmail.com wrote: - Maybe http://git-annex.branchable.com/assistant/ (it seems the xmpp feature is not activated on Windows right now but it could be the best tool soon) - Maybe https://github.com/joeyh/git-remote-gcrypt with a free bitbucket private repo. (this is a fork maintained by joeyh, the git-annex assistant creator) - Spideroak (non-free) has a dropbox like folder but the data is supposed to be encrypted. 2014-09-15 6:59 GMT-04:00 Martin Schöön martin.sch...@gmail.com: One of the things I use org-mode for is making and maintaining TODO-lists. I do this at home and at work and I want the org-files of interest to be available and up-to-date at home and at work. The work-related org-file can not be publicly available for obvious reasons. I have emailed these files back and forth. This works but it isn't fool-proof (sometimes I forget) and I think there should be a less clumsy way to do this. I have tried a free and secure web-dav service. They are closing down and it also was a bit on the clumsy side since I never got their windows client to work at work. (Linux at home using cadaver.) I have seen Git being mentioned in this context in these nooks of the woods. That should work if I can find a free Git repository allowing me to keep files secret. I have looked at a few but have not seen (key word!) clear information on this. Options like BitTorrent Sync work really well but only if both computers run simultaneous which is not the case. Other options? Dropboxish services that keep prying eyes at bay? -- Martin Schöön http://hem.bredband.net/b262106/index.html -- Ramon Diaz-Uriarte Department of Biochemistry, Lab B-25 Facultad de Medicina Universidad Autónoma de Madrid Arzobispo Morcillo, 4 28029 Madrid Spain Phone: +34-91-497-2412 Email: rdia...@gmail.com ramon.d...@iib.uam.es http://ligarto.org/rdiaz
[O] spreadsheet: empty field should be an empty field.
Hello Consider the following table. | Name | Ex 1 | Ex2 | Ex + Ex2 | | smith |1 | 2 |3 | | miller | | |0 | #+TBLFM: $4=$2+$3 Miller has no entries in Ex1 and Ex2 but when using C-u C-u C-c C-c also Ex2+Ex3 gets an entry namely zero. I don't like this I would prefer if this field remains empty. Any way of achieving this? Uwe Brauer smime.p7s Description: S/MIME cryptographic signature
Re: [O] spreadsheet: empty field should be an empty field.
Uwe Brauer o...@mat.ucm.es writes: Hello Consider the following table. | Name | Ex 1 | Ex2 | Ex + Ex2 | | smith |1 | 2 |3 | | miller | | |0 | #+TBLFM: $4=$2+$3 Miller has no entries in Ex1 and Ex2 but when using C-u C-u C-c C-c also Ex2+Ex3 gets an entry namely zero. I don't like this I would prefer if this field remains empty. Any way of achieving this? I think something like NaN was introduced to Org-tbls, but I don't remember the exact syntax, maybe try with 'nan': http://lists.gnu.org/archive/html/emacs-orgmode/2012-12/msg00983.html -- cheers, Thorsten
Re: [O] spreadsheet: empty field should be an empty field.
On Tue, Sep 16, 2014 at 11:42 AM, Thorsten Jolitz tjol...@gmail.com wrote: I think something like NaN was introduced to Org-tbls, but I don't remember the exact syntax, maybe try with 'nan': http://lists.gnu.org/archive/html/emacs-orgmode/2012-12/msg00983.html Yes, and I already documented the OP use case in the second example here: http://orgmode.org/manual/Formula-syntax-for-Calc.html Michael
Re: [O] Babel support for Processing-language
Nick Dokos ndo...@gmail.com writes: Jarmo Hurri jarmo.hu...@syk.fi writes: ... However, I have _no idea_ what kind of work supporting output capture of both static mode (image) and active mode (animation) would require. Ideally, Babel support for Processing output would mean that in the case of 1. an animation - HTML export it would export the entire animation - PDF export it would export, e.g., the first frame from the animation 2. a static picture, the picture would be exported. Here's a possible starting point in your research: http://orgmode.org/worg/org-contrib/babel/languages.html#develop My next step would be to find an ob-lang.el that is as similar as possible to what Processing does and what I'd want to achieve and go from there. Yep, I am going to start doing this if no-one is working on it yet. I woke up in the middle of the night to realize how amazingly easily this can be done if I drop out the support for PDF export, that is, only leave the option to export as HTML. There is no need to even execute the code at export time to draw the image or the animation, because in HTML you can just wrap the original Processing code in a canvas element and the Processing.js code will draw it in the browser. http://en.wikipedia.org/wiki/Processing.js Let me repeat: by just exporting the code suitably embedded in the HTML document, the _browser_ will draw the image or the animation. I just tested it and it works perfectly. So I will implement this in Org/Babel so that - executing Processing code will result in the image / animation being shown in an external window via processing-java - exporting the results of Processing code is only sensible in HTML export, which will produce a web page with the code embedded as described above; the browser does the drawing. These operations will require the availability of processing-java and processing.js in the system where the code is executed/exported. Any objections? Jarmo
Re: [O] spreadsheet: empty field should be an empty field.
Michael Brand michael.ch.br...@gmail.com writes: On Tue, Sep 16, 2014 at 11:42 AM, Thorsten Jolitz tjol...@gmail.com wrote: I think something like NaN was introduced to Org-tbls, but I don't remember the exact syntax, maybe try with 'nan': http://lists.gnu.org/archive/html/emacs-orgmode/2012-12/msg00983.html Yes, and I already documented the OP use case in the second example here: http://orgmode.org/manual/Formula-syntax-for-Calc.html This is something I tend to forget (and usually work around with some lisp). Thanks for the reminder. -- Nicolas Richard
Re: [O] org-ref no key found
Yes, you were right. An update of org-mode fixed everything. Thanks again! John Kitchin writes: If you look in your messages do you see something like jit-lock errors? I do not recall exactly what the errors are but the ones I have seen that resemble what you describe have jit in them. I saw this recently in an ELPA version (maybe around Sept 1), and it went away when I updated the ELPA org version to the most recent one. Julian M. Burgos jul...@hafro.is writes: John, another issue...a really minor one, and I am not sure if it is org-ref related. When I open the notes file, the org faces are not applied evenly. In particular, a) Text after #TITLE: or #AUTHOR appears as regular text. If I use M-x describe face, I get default. If modify in any way the face changes to org-document-info as it should be. b) Within the heading of each reference, the TODO statement appears with the same face as the rest of the heading (org-level-2 face). c) Links to pdf files appear like this, with default face: [[cite:Collie2000]] [[file:/home/julian/Documents/Refs/Collie2000.pdf][pdf]] And not as clickable links cite:Collie2000 pdf (underlined, in blue, with org-link face) Again, as soon as I change anything the org-link face is applied and I get a clickable link. Of all this, the pdf links are the real issue, as they are non-functional until I edit them. Strangely, :PROPERTIES: and :END: appear in their correct face. Also, if I fix the faces (editing the text or pressing enter so I get the right faces) and close the notes files, I get the same wriong faces when I reopen the file. Does this makes sense? Do you know what could be the issue? Many thanks again, Julian Julian M. Burgos writes: Excellent! Many thanks... now it works like a charm. John Kitchin writes: No problem. Thanks for the tips to replicate this. It was pretty helpful in solving the problem (and thanks again to Nick who pointed me towards edebug-defun a while ago!) I think I have fixed this. The problem was org-ref was not finding a key that exists in a file. the way that is done all over org-ref is to insert the contents of the bibfile in temp buffer, and then use bibtex-search-entry on that buffer. It works like a charm usually, but not in the replicated steps you have below. once it works once, though, it seems to always work. Anyway, I think it is fixed now. there is a new version at https://github.com/jkitchin/jmax/blob/master/org/org-ref.org Thanks for reporting the bug! Julian M. Burgos jul...@hafro.is writes: Hi John, I am resending this... I think it did not went through the previous time. I think I can replicate the org-ref bug now (if it is a bug). This is the situation: a) If I open emacs, load a file that already has some link, and click on the link (or place the cursor on it and press enter) I get the no key found message and I cannot open the notes file (I get a Wrong type argument: stringp, nil), although the link to the pdf file works. If I open more than one file, links do not work in any of them. At this point if I check the value of the org-ref-default-bibliography variable, I get the correct path and filename of my .bib file. b) If I insert a new citation (using Ctrl-]) in any of the documents, links work as they should in all documents (this is, I get the title and I can open the notes file). I should say that I am not using the org-ref-insert-bibliography-link function, because I use biblatex and I prefer to insert the Latex \printbibliography command. But if use it and insert the bibliography link, the behaviour does not change. This is what I have in my .emacs file that is related to RefTex and org-ref: -- ;; Load RefTex (add-hook 'LaTeX-mode-hook 'turn-on-reftex) ; with AUCTeX LaTeX mode (autoload 'reftex-mode reftex RefTeX Minor Mode t) (autoload 'turn-on-reftex reftex RefTeX Minor Mode nil) (autoload 'reftex-citation reftex-cite Make citation nil) (autoload 'reftex-index-phrase-mode reftex-index Phrase mode t) (add-hook 'LaTeX-mode-hook 'turn-on-reftex) ; with AUCTeX LaTeX mode (add-hook 'latex-mode-hook 'turn-on-reftex) ; with Emacs latex mode ;; Make RefTeX faster (setq reftex-enable-partial-scans t) (setq reftex-save-parse-info t) (setq reftex-use-multiple-selection-buffers t) (setq reftex-plug-into-AUCTeX t) (setq reftex-default-bibliography '(/home/julian/Documents/Refs/BibTex/references.bib)) (setq reftex-sort-bibtex-matches author) ; Sort entries found in BibTex database (setq bibtex-dialect biblatex) -- (require 'org-ref) (setq org-ref-bibliography-notes /home/julian/Documents/org files/notes.org org-ref-default-bibliography '(/home/julian/Documents/Refs/BibTex/references.bib)
Re: [O] spreadsheet: empty field should be an empty field.
Uwe Brauer o...@mat.ucm.es writes: I think something like NaN was introduced to Org-tbls, but I don't remember the exact syntax, maybe try with 'nan': Http://lists.gnu.org/archive/html/emacs-orgmode/2012-12/msg00983.html Aha, so I would indeed get: | Name | Ex 1 | Ex2 | Ex + Ex2 | | smith |1 | 2 |3 | | miller | | | | #+TBLFM: $4=$2+$3 this is patch is from 2012, which orgmode version did it enter then? Uwe Brauer
Re: [O] spreadsheet: empty field should be an empty field.
Hi Uwe On Tue, Sep 16, 2014 at 1:02 PM, Uwe Brauer o...@mat.ucm.es wrote: this is patch is from 2012, which orgmode version did it enter then? I implemented it in release_7.9.2-908-ga77442b and git tag --contains tells that it is available since Org release 8.0 which is newer than the pre-packaged Org mode of the currently newest released Emacs 23.3. So you need to upgrade Org mode as described here: http://orgmode.org/manual/Installation.html Michael
[O] Bug: problem w/ R code blocks [8.3beta (release_8.3beta-362-ga92789 @ /usr/local/share/emacs/site-lisp/org/)]
I can't evaluate R code blocks in org files. For example the file with contents: --8---cut here---start-8--- #+property: header-args:R :session R-foo #+BEGIN_SRC R print(pi) #+END_SRC --8---cut here---end---8--- spawns an R session that reports: --8---cut here---start-8--- Error: could not find function .ess.eval --8---cut here---end---8--- and does not give me a result. I am running ess-version: 14.09 and am invoking emacs as follows: --8---cut here---start-8--- #!/bin/sh o=/usr/local/share/emacs/site-lisp/org emacs -Q --eval=(progn (add-to-list 'load-path \$o\) (require 'org) (org-babel-do-load-languages 'org-babel-load-languages '((R . t))) (package-initialize) (setq ess-ask-for-ess-directory 'nil ess-directory \~/R/\)) --8---cut here---end---8--- EdK Emacs : GNU Emacs 24.4.50.1 (i686-pc-linux-gnu, GTK+ Version 2.24.23) of 2014-08-23 on dl Package: Org-mode version 8.3beta (release_8.3beta-362-ga92789 @ /usr/local/share/emacs/site-lisp/org/) current state: == (setq org-ctrl-c-ctrl-c-hook '(org-babel-hash-at-point org-babel-execute-safely-maybe) org-tab-first-hook '(org-hide-block-toggle-maybe org-babel-hide-result-toggle-maybe org-babel-header-arg-expand) org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers org-cycle-hide-inline-tasks org-cycle-show-empty-lines org-optimize-window-after-visibility-change) org-agenda-before-write-hook '(org-agenda-add-entry-text) org-speed-command-hook '(org-speed-command-default-hook org-babel-speed-command-hook) org-babel-pre-tangle-hook '(save-buffer) org-occur-hook '(org-first-headline-recenter) org-metaup-hook '(org-babel-load-in-session-maybe) org-confirm-elisp-link-function 'yes-or-no-p org-clock-out-hook '(org-clock-remove-empty-clock-drawer) org-mode-hook '(#[nil \300\301\302\303\304$\207 [org-add-hook change-major-mode-hook org-show-block-all append local] 5] #[nil \300\301\302\303\304$\207 [org-add-hook change-major-mode-hook org-babel-show-result-all append local] 5] org-babel-result-hide-spec org-babel-hide-all-hashes) org-metadown-hook '(org-babel-pop-to-session-maybe) org-src-mode-hook '(org-src-babel-configure-edit-buffer org-src-mode-configure-edit-buffer) org-after-todo-state-change-hook '(org-clock-out-if-current) org-babel-load-languages '((R . t)) org-confirm-shell-link-function 'yes-or-no-p ) signature.asc Description: PGP signature
[O] Emacs Lisp Depth
Hi, Am I the only one to have hit the bottom of the default max_specpdl_size and max_lisp_eval_depth values ? I had already set max_specpdl_size to 2600 and I had to raise it again. I have an Org file of about 1 lines, and I am exporting x100 beamer slides and a latex document for about 200 pages . Curious to hear about other reports. Fabrice
Re: [O] Bug: problem w/ R code blocks [8.3beta (release_8.3beta-362-ga92789 @ /usr/local/share/emacs/site-lisp/org/)]
Thanks - you came before me. I get the same error but managed to work around. This is likely caused by the upgrade of ess, as I realized it after upgrading to ess 14.09. You can work around by 1) evaluating the R code which gives the error message 2) quitting the R session 3) re-starting the R session manually in the same window (where the old R session was) I also send this to the ess mailing list. Cheers, Rainer Ed Kademan e...@kademan.org writes: I can't evaluate R code blocks in org files. For example the file with contents: #+property: header-args:R :session R-foo #+BEGIN_SRC R print(pi) #+END_SRC spawns an R session that reports: Error: could not find function .ess.eval and does not give me a result. I am running ess-version: 14.09 and am invoking emacs as follows: #!/bin/sh o=/usr/local/share/emacs/site-lisp/org emacs -Q --eval=(progn (add-to-list 'load-path \$o\) (require 'org) (org-babel-do-load-languages 'org-babel-load-languages '((R . t))) (package-initialize) (setq ess-ask-for-ess-directory 'nil ess-directory \~/R/\)) EdK Emacs : GNU Emacs 24.4.50.1 (i686-pc-linux-gnu, GTK+ Version 2.24.23) of 2014-08-23 on dl Package: Org-mode version 8.3beta (release_8.3beta-362-ga92789 @ /usr/local/share/emacs/site-lisp/org/) current state: == (setq org-ctrl-c-ctrl-c-hook '(org-babel-hash-at-point org-babel-execute-safely-maybe) org-tab-first-hook '(org-hide-block-toggle-maybe org-babel-hide-result-toggle-maybe org-babel-header-arg-expand) org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers org-cycle-hide-inline-tasks org-cycle-show-empty-lines org-optimize-window-after-visibility-change) org-agenda-before-write-hook '(org-agenda-add-entry-text) org-speed-command-hook '(org-speed-command-default-hook org-babel-speed-command-hook) org-babel-pre-tangle-hook '(save-buffer) org-occur-hook '(org-first-headline-recenter) org-metaup-hook '(org-babel-load-in-session-maybe) org-confirm-elisp-link-function 'yes-or-no-p org-clock-out-hook '(org-clock-remove-empty-clock-drawer) org-mode-hook '(#[nil \300\301\302\303\304$\207 [org-add-hook change-major-mode-hook org-show-block-all append local] 5] #[nil \300\301\302\303\304$\207 [org-add-hook change-major-mode-hook org-babel-show-result-all append local] 5] org-babel-result-hide-spec org-babel-hide-all-hashes) org-metadown-hook '(org-babel-pop-to-session-maybe) org-src-mode-hook '(org-src-babel-configure-edit-buffer org-src-mode-configure-edit-buffer) org-after-todo-state-change-hook '(org-clock-out-if-current) org-babel-load-languages '((R . t)) org-confirm-shell-link-function 'yes-or-no-p ) -- Rainer M. Krug email: Raineratkrugsdotde PGP: 0x0F52F982 pgpufjzeifxSH.pgp Description: PGP signature
Re: [O] Emacs Lisp Depth
No, you're not the only one. I've run across it several times. I'd say about half of them revealed bugs on my part, but there's no doubt that it occasionally has to be raised for legitimate reasons. I assume that the default value is somewhat arbitrary, but chosen pragmatically. ,Doug Douglas Lewan Shubert Ticketing (201) 489-8600 ext 224 or ext 4335 This is a slow pup, he said continuing his ascent. From: emacs-orgmode-bounces+dougl=shubertticketing@gnu.org [mailto:emacs-orgmode-bounces+dougl=shubertticketing@gnu.org] On Behalf Of Fabrice Popineau Sent: Tuesday, 2014 September 16 09:01 To: emacs-orgmode@gnu.org; Emacs developers Subject: [O] Emacs Lisp Depth Hi, Am I the only one to have hit the bottom of the default max_specpdl_size and max_lisp_eval_depth values ? I had already set max_specpdl_size to 2600 and I had to raise it again. I have an Org file of about 1 lines, and I am exporting x100 beamer slides and a latex document for about 200 pages . Curious to hear about other reports. Fabrice
Re: [O] Emacs Lisp Depth
Hello, Fabrice Popineau fabrice.popin...@gmail.com writes: Am I the only one to have hit the bottom of the default max_specpdl_size and max_lisp_eval_depth values ? I had already set max_specpdl_size to 2600 and I had to raise it again. I have an Org file of about 1 lines, and I am exporting x100 beamer slides and a latex document for about 200 pages . Curious to hear about other reports. This is likely due to a bug or an inefficient algorithm. Does it happen with other back-ends as well? Does it happen when parsing (i.e., simply calling `org-element-parse-buffer'? Could you send the file you're exporting in private? If needed, you can use the following function (provided you can parse the buffer) to hide contents (defun ngz-scramble-contents () (interactive) (let ((tree (org-element-parse-buffer))) (org-element-map tree '(code comment comment-block example-block fixed-width keyword link node-property plain-text verbatim) (lambda (obj) (case (org-element-type obj) ((code comment comment-block example-block fixed-width keyword node-property verbatim) (let ((value (org-element-property :value obj))) (org-element-put-property obj :value (replace-regexp-in-string [[:alnum:]] x value (link (unless (string= (org-element-property :type obj) radio) (org-element-put-property obj :raw-link http://orgmode.org;))) (plain-text (org-element-set-element obj (replace-regexp-in-string [[:alnum:]] x obj) nil nil nil t) (let ((buffer (get-buffer-create *Scrambled text*))) (with-current-buffer buffer (insert (org-element-interpret-data tree)) (goto-char (point-min))) (switch-to-buffer buffer Regards, -- Nicolas Goaziou
Re: [O] Export filters question
2014-09-15 18:30 GMT+02:00 Nicolas Goaziou m...@nicolasgoaziou.fr: Hello, Since filters are meant for tweaking generated output, the information you're looking after is not readily accessible at this level. Your request makes sense, but I think you really want to write a derived back-end with a custom headline transcoder instead. Thanks a lot. I was wondering if I had missed an option. I may have an option to change my LaTeX macros and if it is does not work, I'll try to derive a new backend. Fabrice
Re: [O] spreadsheet: empty field should be an empty field.
On Tue, Sep 16, 2014 at 1:56 PM, Michael Brand michael.ch.br...@gmail.com wrote: the currently newest released Emacs 23.3. This was (hopefully obviously) a typo and should have been the currently newest released Emacs 24.3. Michael
Re: [O] org-mode-hook not called when entering org files
hob...@poukram.net (Rémi Letot) writes: That's the org-mode bundled with my emacs: Org-mode version 8.2.6 (release_8.2.6-1 @ /usr/share/emacs/24.4.50/lisp/org/) GNU Emacs 24.4.50.1 (x86_64-pc-linux-gnu, GTK+ Version 3.12.2) of 2014-08-23 on gkar, modified by Debian ... See above, that's org currently bundled with emacs. I could be coerced to try trunk if it has a chance to solve the problem and the test is of some use to you, but then i have some docs to read first :-) OK, it's probably caused by http://debbugs.gnu.org/cgi/bugreport.cgi?bug=17724 then. It's your choice what you want to do: you can wait until it's fixed in emacs, or you can upgrade. The test is of no use to me: my org-mode is working :-) -- Nick
[O] Headline text special property
Hi, Is there a special property that contains the text of a headline but not the stars, todo, tags or any of that other data? Alternatively, is there a way to clean up %ITEM before giving it to a column-view? BrettW
Re: [O] Headline text special property
Brett Witty brettwi...@brettwitty.net writes: Hi, Is there a special property that contains the text of a headline but not the stars, todo, tags or any of that other data? not a property, but functions: ,[ C-h f org-heading-components RET ] | org-heading-components is a compiled Lisp function in `org.el'. | | (org-heading-components) | | Return the components of the current heading. | This is a list with the following elements: | - the level as an integer | - the reduced level, different if `org-odd-levels-only' is set. | - the TODO keyword, or nil | - the priority character, like ?A, or nil if no priority is given | - the headline text itself, or the tags string if no headline text | - the tags string, or nil. ` * TODO Test :mytag: #+BEGIN_SRC emacs-lisp (save-excursion (outline-previous-heading) (nth 4 (org-heading-components))) #+END_SRC #+results: : Test or ,[ C-h f org-get-heading RET ] | org-get-heading is a compiled Lisp function in `org.el'. | | (org-get-heading optional NO-TAGS NO-TODO) | | Return the heading of the current entry, without the stars. | When NO-TAGS is non-nil, don't include tags. | When NO-TODO is non-nil, don't include TODO keywords. ` #+BEGIN_SRC emacs-lisp (save-excursion (outline-previous-heading) (org-get-heading t t)) #+END_SRC #+results: : Test -- cheers, Thorsten
[O] resizing windows from an org buffer, reqest for org-shiftcontrolcursor-final-hook
I have (global-set-key (kbd S-C-left) 'shrink-window-horizontally) (global-set-key (kbd S-C-right) 'enlarge-window-horizontally) (global-set-key (kbd S-C-down) 'shrink-window) (global-set-key (kbd S-C-up) 'enlarge-window) in my init file, as suggested at http://www.emacswiki.org/emacs-en/WindowResize. However, when I am in an org file, the binding fails. I had hoped that (setq org-support-shift-select t) would fix this, but it only seems to want to allow selection. A solution might be similar to the one ;; quick keys for switching windows (windmove-default-keybindings) ;; fix windmove in org-mode (add-hook 'org-shiftup-final-hook 'windmove-up) (add-hook 'org-shiftleft-final-hook 'windmove-left) (add-hook 'org-shiftdown-final-hook 'windmove-down) (add-hook 'org-shiftright-final-hook 'windmove-right) as suggested at http://orgmode.org/manual/Conflicts.html. Looking at the code in org.el, it seems org-shiftcontrolup and the like were not so lucky to get such a final-hook. Can this be added? I am currently using package.el org-mode, so I may not immediately get to try it out, but would look forward to adding it to my workflow soon. Or do others have another solution to resizing windows in org-mode? Brady
Re: [O] Cooperating with oneself using the cloud?
Thanks guys, great response so far. I now have a lot of options to consider and even though a home server might be the end game that will have to wait till I have more time to spare. Those of you into home servers might find this interesting: http://www.linuxjournal.com/content/raspberry-pi-perfect-home-server -- Martin Schöön http://hem.bredband.net/b262106/index.html
[O] TODO items in lists (not headings)
Is there any way to have TODO items in bullet lists rather than headings: * Meeting report ** Meeting 1 - a thing that happened - another thing that happened - TODO: email everyone about all the things - some more things that happened org-mode seems to only allow TODO in headings as far as I can tell. -- Gary
Re: [O] TODO items in lists (not headings)
Does the - [ ] form not work for you? They are generally considered the equivalent in my experience. C-c checks them. Gary Oberbrunner ga...@oberbrunner.com writes: Is there any way to have TODO items in bullet lists rather than headings: * Meeting report ** Meeting 1 - a thing that happened - another thing that happened - TODO: email everyone about all the things - some more things that happened org-mode seems to only allow TODO in headings as far as I can tell.
Re: [O] Bug: problem w/ R code blocks [8.3beta (release_8.3beta-362-ga92789 at /usr/local/share/emacs/site-lisp/org/)]
Rainer M Krug Rainer at krugs.de writes: Thanks - you came before me. I get the same error but managed to work around. This is likely caused by the upgrade of ess, Likely. But it may not be an ESS problem per se. M-x R starts a process that runs asynchronously. In interactive use there is no issue (barring something in .First() that slows the startup for a very long time). But, ... If the (rename-buffer ...) in org-babel-R-initiate-session runs before all the setup that ESS performs in the process buffer is complete, chaos can result. Not sure what the best way is to fix this. A simple hack to temporarily solve the OP's problem is to force a pause before (rename-buffer ...) with (sleep-for 0.1) or something. HTH, Chuck
Re: [O] You don't like the HTML export; well, that could change!
Many thanks Fabrice for this very nice html theme. I am going to use it also. I cannot use another emacs-theme than your emacs-leuven-theme, and it is going to be probably the same with your html theme ! Again, thanks ! Jo. 2014-09-15 20:58 GMT+02:00 Fabrice Niessen fni-n...@pirilampo.org: Hello, I'm announcing the release of Bigblow, a CSS + JS theme for the Org HTML exports. To use it in your own files, adding these lines should make it: --8---cut here---start-8--- #+HTML_HEAD: link rel=stylesheet type=text/css href= http://www.pirilampo.org/styles/bigblow/css/htmlize.css/ #+HTML_HEAD: link rel=stylesheet type=text/css href= http://www.pirilampo.org/styles/bigblow/css/bigblow.css/ #+HTML_HEAD: link rel=stylesheet type=text/css href= http://www.pirilampo.org/styles/bigblow/css/hideshow.css/ #+HTML_HEAD: script type=text/javascript src= http://www.pirilampo.org/styles/bigblow/js/jquery-1.11.0.min.js;/script #+HTML_HEAD: script type=text/javascript src= http://www.pirilampo.org/styles/bigblow/js/jquery-ui-1.10.2.min.js /script #+HTML_HEAD: script type=text/javascript src= http://www.pirilampo.org/styles/bigblow/js/jquery.localscroll-min.js /script #+HTML_HEAD: script type=text/javascript src= http://www.pirilampo.org/styles/bigblow/js/jquery.scrollTo-1.4.3.1-min.js /script #+HTML_HEAD: script type=text/javascript src= http://www.pirilampo.org/styles/bigblow/js/jquery.zclip.min.js;/script #+HTML_HEAD: script type=text/javascript src= http://www.pirilampo.org/styles/bigblow/js/bigblow.js;/script #+HTML_HEAD: script type=text/javascript src= http://www.pirilampo.org/styles/bigblow/js/hideshow.js;/script --8---cut here---end---8--- If you clone my repo from GitHub [1], it can become as easy as adding just one line: --8---cut here---start-8--- #+SETUPFILE: path/to/Git/repo/setup/bigblow-pirilampo.setup --8---cut here---end---8--- (PS- It would be very nice if we could add http references here! Then, there would even be no need to copy the files locally...) Test it on your files, or look at the video I posted on YouTube to see what it looks like: https://www.youtube.com/watch?v=DnSGSiXYuOk Best regards, Fabrice PPS- I will still make some changes in a couple of days, like renaming the files so that they have a version number, but that I'll warn you when I'll get this done. [1] https://github.com/fniessen/org-html-themes -- Fabrice Niessen Leuven, Belgium http://www.pirilampo.org/
Re: [O] TODO items in lists (not headings)
[Sorry, I'm going to mess up the quoting here because I replied to Tory, not the list. - gco] On Tue, Sep 16, 2014 at 4:32 PM, Tory S. Anderson torys.ander...@gmail.com wrote: Does the - [ ] form not work for you? They are generally considered the equivalent in my experience. C-c checks them. Gary Oberbrunner ga...@oberbrunner.com writes: Is there any way to have TODO items in bullet lists rather than headings: * Meeting report ** Meeting 1 - a thing that happened - another thing that happened - TODO: email everyone about all the things - some more things that happened org-mode seems to only allow TODO in headings as far as I can tell. Gary replied: Hi Tory; I don't think checkboxes (- [ ]) are the same as todo items. They don't show up with C-c / t or in the global TODO list, you can't use regular todo workflows. Tory: Ah; Yeah, you're right. You have a different work flow than I do with TODO items. What's your reason for not using TODO items themselves? Gary: My reason for not using TODO is just that it'd be ugly and confusing to put a heading in the middle of a list. Compare this: * Meeting report ** Meeting 1 - a thing that happened - another thing that happened - TODO: email everyone about all the things - some more things that happened to this: * Meeting report ** Meeting 1 - a thing that happened - another thing that happened ***TODO: email everyone about all the things - some more things that happened Tory: Perfect sense; yeah, TODO headers have a tendency to clobber later stuff, and list stuff doesn't make it into the workflow. Makes good sense. -- Gary
[O] get C-c C-o to act similar to C-x C-j
Can C-c C-o, when invoked on a [file:] link at point jump to the file in a dired buffer, the way C-x C-j jumps me to a buffer's dired entry? C-u C-c C-o isn't it, either---I don't want to actually open the file, just see it in dired so I can do whatever needs to be done with it (attach to an email, copy to an external drive, etc). I have a list of video files in this case, and when I do C-c C-o, they open automatically in VLC. This isn't so useful for me. Alternatively, are there ways to do such diredlike things as copying, deleting, attaching, from org mode? If I just need to RTFM here, I'd apprecaite a nudge in the right direction! Thank you, steven arntson
[O] [PATCH] WAS Re: Bug: problem w/ R code blocks [8.3beta (release_8.3beta-362-ga92789 at /usr/local/share/emacs/site-lisp/org/)]
Charles Berry ccberry at ucsd.edu writes: Rainer M Krug Rainer at krugs.de writes: Thanks - you came before me. I get the same error but managed to work around. This is likely caused by the upgrade of ess, Likely. But it may not be an ESS problem per se. M-x R starts a process that runs asynchronously. In interactive use there is no issue (barring something in .First() that slows the startup for a very long time). But, ... If the (rename-buffer ...) in org-babel-R-initiate-session runs before all the setup that ESS performs in the process buffer is complete, chaos can result. Not sure what the best way is to fix this. OK. Looks like (ess-wait-for-process) fixes this. Here is a patch. Chuck == From 89472012d80ce9ad4c8722f304c0d29327efa1fc Mon Sep 17 00:00:00 2001 From: chasberry ccbe...@ucsd.edu Date: Tue, 16 Sep 2014 19:57:59 -0700 Subject: [PATCH] lisp/ob-R.el: use `ess-wait-for-process' to assure clean session startup * lisp/ob-R.el (org-babel-R-initiate-session): Make sure that (R) has finished before `rename-buffer' is run. TINYCHANGE --- lisp/ob-R.el | 3 +++ 1 file changed, 3 insertions(+) diff --git a/lisp/ob-R.el b/lisp/ob-R.el index 41b943c..7575acf 100644 --- a/lisp/ob-R.el +++ b/lisp/ob-R.el @@ -35,6 +35,8 @@ (declare-function inferior-ess-send-input ext:ess-inf ()) (declare-function ess-make-buffer-current ext:ess-inf ()) (declare-function ess-eval-buffer ext:ess-inf (vis)) +(declare-function ess-wait-for-process ext:ess-inf + (optional proc sec-prompt wait force-redisplay)) (declare-function org-number-sequence org-compat (from optional to inc)) (declare-function org-remove-if-not org (predicate seq)) (declare-function org-every org (pred seq)) @@ -262,6 +264,7 @@ This function is called by `org-babel-execute-src-block'. ;; Session buffer exists, but with dead process (set-buffer session)) (require 'ess) (R) + (ess-wait-for-process) (rename-buffer (if (bufferp session) (buffer-name session) -- 1.8.5.2 (Apple Git-48)
Re: [O] TODO items in lists (not headings)
Aloha Gary, Gary Oberbrunner ga...@oberbrunner.com writes: Gary: My reason for not using TODO is just that it'd be ugly and confusing to put a heading in the middle of a list. Compare this: * Meeting report ** Meeting 1 - a thing that happened - another thing that happened - TODO: email everyone about all the things - some more things that happened to this: * Meeting report ** Meeting 1 - a thing that happened - another thing that happened ***TODO: email everyone about all the things - some more things that happened One solution is to use a capture template for TODO items and then refile them. I picked this up from Bernt Hansen and like it a lot: http://doc.norang.ca/org-mode.html#Capture hth, Tom -- Thomas S. Dye http://www.tsdye.com
