Re: [O] can't get table output when running r babel
Hi Chuck and Robert, Thanks for your replies. I am able to get it working on an independent installation. It looks like something has gone wrong in my package installations. I guess it's probably time to nuke my repo and start over, already spent quite a lot of time debugging this particular error. Thanks again, Zhihao On Thu, Aug 9, 2018 at 6:32 AM Robert Klein wrote: > On Wed, 8 Aug 2018 16:10:10 +0100 > Zhihao Ding wrote: > > > Hi there, > > > > I can't seem to get a table output from running this toy example: > > > >#+HEADER: :results value > > #+BEGIN_SRC R > > data <- data.frame(list(a=c(1,2,3), b=c(4,5,6))) > > data > > #+END_SRC > > > > #+RESULTS: > > > > The problem seems to be > > org-babel-insert-result: Wrong type argument: markerp, nil > > > > I see that the value of org-field-marker is nil in org-table.el. > > > > I am using this version of org: > > Org mode version 9.1.13 (9.1.13-elpa @ > > /home/user/.emacs.d/elpa/org-20180806/) > > > > If anyone could advise it'd be great. > > > > Thanks, > > Zhihao > > > Hi Zhihao, > > I als get > > #+RESULTS: > | 1 | 4 | > | 2 | 5 | > | 3 | 6 | > > > using > "GNU Emacs 26.1 (build 3, x86_64-unknown-openbsd6.3, GTK+ Version 2.24.32) > of 2018-05-30" > Org mode version 9.1.13 (release_9.1.13-5-g30498e @ > /home/roklein/.emacs.d/org-mode/lisp/) > > My org version is up-to-date “maint”, your elpa version should be up to > date, too (“20180806”). > > What ist your Emacs version? Do you also encounter the issue with a > minimal Emacs/Org setup? > > Best regards > Robert > > > > > >
[O] can't get table output when running r babel
Hi there, I can't seem to get a table output from running this toy example: #+HEADER: :results value #+BEGIN_SRC R data <- data.frame(list(a=c(1,2,3), b=c(4,5,6))) data #+END_SRC #+RESULTS: The problem seems to be org-babel-insert-result: Wrong type argument: markerp, nil I see that the value of org-field-marker is nil in org-table.el. I am using this version of org: Org mode version 9.1.13 (9.1.13-elpa @ /home/user/.emacs.d/elpa/org-20180806/) If anyone could advise it'd be great. Thanks, Zhihao
Re: [O] insert evaluation results in place
Thank you! Zhihao On Wed, Mar 28, 2018 at 4:28 PM Berry, Charles <ccbe...@ucsd.edu> wrote: > > > > On Mar 28, 2018, at 7:42 AM, Zhihao Ding <zhihao.d...@gmail.com> wrote: > > > > I was wondering if anyone could share an example for referencing the > results of a source code block in place. > > > > > See > > (info "(org) Evaluating code blocks") > > Example > > > #+Name: put_in_para > #+BEGIN_SRC R :exports none > n_value=10 > n_value > #+END_SRC > > > This is the result: call_put_in_para() of the above. > > HTH, > > Chuck >
[O] insert evaluation results in place
Hi there, I was wondering if anyone could share an example for referencing the results of a source code block in place. For example, a source code block could be defined as below #+HEADER: n_value #+HEADER: :results value #+HEADER: :noweb yes #+BEGIN_SRC R n_value=10 n_value #+END_SRC and I want to insert the result value after evaluation into a paragraph of text. I currently evaluate the source code block first, then copy the stuff under "#+RESULTS:" to the target location. I want to make it in one go, especially when the output is just a single number. Thank you, Zhihao
[O] environmental variables in links in org
Hi guys, Is it a good idea to use environment variables in the links referenced in a org file? e.g. [[$mydata/myfigure.pdf]] If so how to achieve this? Many thanks, Zhihao
Re: [O] :EXPORT tags in property drawer not recognised in org 8.3
Thanks Rasmus. After some exploration I realised that I can't have empty
lines or comment lines (by #) between :PROPERTIES: and :END: - I used to
have blocks of :EXPORT_ for different things. Once I remove those I get the
right export as before. This is fixed for me now.
Thanks,
Zhihao
On 29 September 2015 at 21:54, Rasmus <ras...@gmx.us> wrote:
> Hi Zhihao,
>
> Zhihao Ding <zhihao.d...@gmail.com> writes:
>
> > Dear Org experts,
> >
> > I am having some problems with exporting in org 8.3.1. I've been using
> > :PROPERTIES to control export of a heading, e.g.
> >
> > :PROPERTIES:
> > :EXPORT_LaTeX_HEADER+: \usepackage{array}
> > :EXPORT_LaTeX_HEADER+: \usepackage{tikz}
> > :EXPORT_LATEX_HEADER+: \usepackage{geometry}
> > :EXPORT_TITLE: title
> > :EXPORT_FILE_NAME: file.pdf
> > :END:
> >
> > However I realised that they are not correctly recognised in the latex
> > output. Any advice?
>
>
> Could you be more specific about what is wrong? In a quick test I got the
> requested packages and title.
>
> Could you try 8.3.2 or master to see if the problem persists.
>
> Thanks,
> Rasmus
>
> --
> ツ
>
>
>
--
Regards,
Zhihao Ding
[O] :EXPORT tags in property drawer not recognised in org 8.3
Dear Org experts,
I am having some problems with exporting in org 8.3.1. I've been using
:PROPERTIES to control export of a heading, e.g.
:PROPERTIES:
:EXPORT_LaTeX_HEADER+: \usepackage{array}
:EXPORT_LaTeX_HEADER+: \usepackage{tikz}
:EXPORT_LATEX_HEADER+: \usepackage{geometry}
:EXPORT_TITLE: title
:EXPORT_FILE_NAME: file.pdf
:END:
However I realised that they are not correctly recognised in the latex
output. Any advice?
Thanks,
Zhihao
[O] compile latex on remote server
Dear org experts, I'm working on an org file on a remote server using tramp. Often I need to export beamer slides from it. I realised that it has problems with the file paths, which currently are local with respect to the server. I thus had to first export a tex file, which worked fine over tramp, then compile it in a shell on the server. I'd like to speed this up to do the process in one go, as if I am working on a local machine. Sometimes when the latex file has references I then had to compile one extra time for bibtex, which soon became tedious. Thanks ! Zhihao
Re: [O] compile latex on remote server
Thanks for your reply. In export if I do "l P" or "l O" I get the follow messages Transcript written on .//texput.log. This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013/Debian) restricted \write18 enabled. entering extended mode ! I can't find file `/ssh:zhihao@server:/data/home/zhihao/sgt.tex'. <*> server:/data/home/zhihao/sgt.tex (Press Enter to retry, or Control-D to exit) Please type another input file name ! Emergency stop. <*> server:/data/home/zhihao/sgt.tex ! ==> Fatal error occurred, no output PDF file produced! On 7 September 2015 at 14:14, Loris Bennett <loris.benn...@fu-berlin.de> wrote: > Hi Zhihao, > > Zhihao Ding <zhihao.d...@gmail.com> writes: > > > Dear org experts, > > > > I'm working on an org file on a remote server using tramp. Often I need > to > > export beamer slides from it. I realised that it has problems with the > file > > paths, which currently are local with respect to the server. I thus had > to first > > export a tex file, which worked fine over tramp, then compile it in a > shell on > > the server. > > > > I'd like to speed this up to do the process in one go, as if I am > working on a > > local machine. Sometimes when the latex file has references I then had to > > compile one extra time for bibtex, which soon became tedious. > > > > Thanks ! > > > > Zhihao > > What errors are you getting? I regularly export PDFs from remote org > files (albeit via sshfs) and have no problems. > > Cheers, > > Loris > > -- > This signature is currently under construction. > > > -- Regards, Zhihao Ding
Re: [O] compile latex on remote server
My emacs session is local and I am using tramp to open the org file on the remote server. Then when I tried to export it to latex and compile I get that error messages. Cheers, Zhihao On 7 September 2015 at 14:39, Loris Bennett <loris.benn...@fu-berlin.de> wrote: > Hi Zhihao, > > Zhihao Ding <zhihao.d...@gmail.com> writes: > > > Thanks for your reply. In export if I do "l P" or "l O" I get the follow > > messages > > > > Transcript written on .//texput.log. > > This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013/Debian) > > restricted \write18 enabled. > > entering extended mode > > ! I can't find file `/ssh:zhihao@server:/data/home/zhihao/sgt.tex'. > > Is this file created on the remote server? If so, can you open it in > Emacs via tramp? > > Cheers, > > Loris > > > > <*> server:/data/home/zhihao/sgt.tex > > (Press Enter to retry, or Control-D to exit) > > Please type another input file name > > ! Emergency stop. > > <*> server:/data/home/zhihao/sgt.tex > > ! ==> Fatal error occurred, no output PDF file produced! > > > > On 7 September 2015 at 14:14, Loris Bennett <loris.benn...@fu-berlin.de> > wrote: > > > > Hi Zhihao, > > > > > > > > Zhihao Ding <zhihao.d...@gmail.com> writes: > > > > > Dear org experts, > > > > > > I'm working on an org file on a remote server using tramp. Often I > need to > > > export beamer slides from it. I realised that it has problems with > the > > file > > > paths, which currently are local with respect to the server. I > thus had to > > first > > > export a tex file, which worked fine over tramp, then compile it > in a > > shell on > > > the server. > > > > > > I'd like to speed this up to do the process in one go, as if I am > working > > on a > > > local machine. Sometimes when the latex file has references I then > had to > > > compile one extra time for bibtex, which soon became tedious. > > > > > > Thanks ! > > > > > > Zhihao > > > > > > What errors are you getting? I regularly export PDFs from remote org > > files (albeit via sshfs) and have no problems. > > > > Cheers, > > > > Loris > > > > -- > > This signature is currently under construction. > > -- > Dr. Loris Bennett (Mr.) > ZEDAT, Freie Universität Berlin Email loris.benn...@fu-berlin.de > > > -- Regards, Zhihao Ding
[O] remote R session
Hi there, I was wondering how to automatically fire up a remote R session when editing source code in babel source code block? I'd like to have everything on server and be able to play with it including making plots. Currently I do tangle to a file on server first and then use tramp to access it. Although I get a remote R session, the problem is that I'll be working on a generated copy. Any ways to make improve this ? Thanks, Zhihao
Re: [O] problem with beamer slides
I have solved this problem. It's a problem with latex not org. Thanks for
replying to this.
Cheers,
Zhihao
On 6 August 2015 at 13:20, Zhihao Ding zhihao.d...@gmail.com wrote:
I export the subtree, below is the org, and after that is the latex
===
* projects
:PROPERTIES:
:header-args: :cache yes
:EXPORT_DATE: \today
:EXPORT_AUTHOR: myname
:EXPORT_LaTeX_HEADER+: \usepackage{array}
:EXPORT_LaTeX_HEADER+: \usepackage{tikz}
:EXPORT_LATEX_HEADER+: \usepackage[margin=1in]{geometry}
:EXPORT_LaTeX_HEADER+: \usepackage{algpseudocode}
:EXPORT_LaTeX_HEADER+: \usepackage[extendedchars]{grffile}
:EXPORT_LaTeX_HEADER+: \usepackage[T1]{fontenc}
:EXPORT_TITLE: my title
:EXPORT_FILE_NAME: mypdf.pdf
:EXPORT_OPTIONS: H:3 toc:nil *:t ^:nil :t
:EXPORT_LaTeX_CLASS: beamer
:EXPORT_SELECT_TAGS: export
:EXPORT_EXCLUDE_TAGS: noexport
:END:
** Data
*** Test
Slide
- item
===
% Created 2015-08-06 Thu 13:20
\documentclass[presentation]{beamer}
\usepackage[utf8]{inputenc}
\usepackage[T1]{fontenc}
\usepackage{fixltx2e}
\usepackage{graphicx}
\usepackage{longtable}
\usepackage{float}
\usepackage{wrapfig}
\usepackage{rotating}
\usepackage[normalem]{ulem}
\usepackage{amsmath}
\usepackage{textcomp}
\usepackage{marvosym}
\usepackage{wasysym}
\usepackage{amssymb}
\usepackage{hyperref}
\tolerance=1000
\usepackage{array} \usepackage{tikz} \usepackage[margin=1in]{geometry}
\usepackage{algpseudocode} \usepackage[extendedchars]{grffile}
\usepackage[T1]{fontenc}
\author{myname}
\date{\today}
\title{my title}
\hypersetup{
pdfkeywords={},
pdfsubject={},
pdfcreator={Emacs 24.4.1 (Org mode 8.2.10)}}
\begin{document}
\maketitle
\section{Data}
\label{sec-1}
\subsection{Test}
\label{sec-1-1}
\subsubsection{Slide}
\label{sec-1-1-1}
\begin{itemize}
\item item
\end{itemize}
% Emacs 24.4.1 (Org mode 8.2.10)
\end{document}
On 6 August 2015 at 12:27, Eric S Fraga e.fr...@ucl.ac.uk wrote:
On Thursday, 6 Aug 2015 at 12:15, Zhihao Ding wrote:
Hi guys,
I had some problems producing beamer slides after I installed emacs and
org
on a new computer. I am using emacs 24.4.1, and installed org (8.2.10
org-2018-08-03) using elpa.
I don't seem to be able to get the frame environment even when I set the
H in the options, e.g.
:EXPORT_OPTIONS: H:3 toc:nil *:t ^:nil :t
It just gets to subsubsection and then stop. Any idea how to fix this?
Thanks a lot!
How are you exporting? Can you post a small example file?
--
: Eric S Fraga (0xFFFCF67D), Emacs 25.0.50.2, Org
release_8.3beta-1315-ga3b2b7
--
Regards,
Zhihao Ding
--
Regards,
Zhihao Ding
[O] problem with beamer slides
Hi guys, I had some problems producing beamer slides after I installed emacs and org on a new computer. I am using emacs 24.4.1, and installed org (8.2.10 org-2018-08-03) using elpa. I don't seem to be able to get the frame environment even when I set the H in the options, e.g. :EXPORT_OPTIONS: H:3 toc:nil *:t ^:nil :t It just gets to subsubsection and then stop. Any idea how to fix this? Thanks a lot! -- Regards, Zhihao Ding
Re: [O] problem with beamer slides
I export the subtree, below is the org, and after that is the latex
===
* projects
:PROPERTIES:
:header-args: :cache yes
:EXPORT_DATE: \today
:EXPORT_AUTHOR: myname
:EXPORT_LaTeX_HEADER+: \usepackage{array}
:EXPORT_LaTeX_HEADER+: \usepackage{tikz}
:EXPORT_LATEX_HEADER+: \usepackage[margin=1in]{geometry}
:EXPORT_LaTeX_HEADER+: \usepackage{algpseudocode}
:EXPORT_LaTeX_HEADER+: \usepackage[extendedchars]{grffile}
:EXPORT_LaTeX_HEADER+: \usepackage[T1]{fontenc}
:EXPORT_TITLE: my title
:EXPORT_FILE_NAME: mypdf.pdf
:EXPORT_OPTIONS: H:3 toc:nil *:t ^:nil :t
:EXPORT_LaTeX_CLASS: beamer
:EXPORT_SELECT_TAGS: export
:EXPORT_EXCLUDE_TAGS: noexport
:END:
** Data
*** Test
Slide
- item
===
% Created 2015-08-06 Thu 13:20
\documentclass[presentation]{beamer}
\usepackage[utf8]{inputenc}
\usepackage[T1]{fontenc}
\usepackage{fixltx2e}
\usepackage{graphicx}
\usepackage{longtable}
\usepackage{float}
\usepackage{wrapfig}
\usepackage{rotating}
\usepackage[normalem]{ulem}
\usepackage{amsmath}
\usepackage{textcomp}
\usepackage{marvosym}
\usepackage{wasysym}
\usepackage{amssymb}
\usepackage{hyperref}
\tolerance=1000
\usepackage{array} \usepackage{tikz} \usepackage[margin=1in]{geometry}
\usepackage{algpseudocode} \usepackage[extendedchars]{grffile}
\usepackage[T1]{fontenc}
\author{myname}
\date{\today}
\title{my title}
\hypersetup{
pdfkeywords={},
pdfsubject={},
pdfcreator={Emacs 24.4.1 (Org mode 8.2.10)}}
\begin{document}
\maketitle
\section{Data}
\label{sec-1}
\subsection{Test}
\label{sec-1-1}
\subsubsection{Slide}
\label{sec-1-1-1}
\begin{itemize}
\item item
\end{itemize}
% Emacs 24.4.1 (Org mode 8.2.10)
\end{document}
On 6 August 2015 at 12:27, Eric S Fraga e.fr...@ucl.ac.uk wrote:
On Thursday, 6 Aug 2015 at 12:15, Zhihao Ding wrote:
Hi guys,
I had some problems producing beamer slides after I installed emacs and
org
on a new computer. I am using emacs 24.4.1, and installed org (8.2.10
org-2018-08-03) using elpa.
I don't seem to be able to get the frame environment even when I set the
H in the options, e.g.
:EXPORT_OPTIONS: H:3 toc:nil *:t ^:nil :t
It just gets to subsubsection and then stop. Any idea how to fix this?
Thanks a lot!
How are you exporting? Can you post a small example file?
--
: Eric S Fraga (0xFFFCF67D), Emacs 25.0.50.2, Org
release_8.3beta-1315-ga3b2b7
--
Regards,
Zhihao Ding
Re: [O] resize table in latex
Thanks very much for your reply. The proposed method
in this reply won’t work. It needs to be in the following
structure where this line
“\scriptsize{\resizebox{\textwidth}{!}{“
is after “\begin{table}[htb]” and immediately before
“\begin{tabular}{rr}”.
I don’t know how to achieve that in the org syntax.
\begin{table}[htb]
\caption[caption]{\label{tablelabel} caption}
\centering
\scriptsize{\resizebox{\textwidth}{!}{
\begin{tabular}{rr}
1 4 \\
\end{tabular}
}}
\end{table}
Thanks,
Zhihao
On 1 Jun 2015, at 17:35, Suvayu Ali fatkasuvayu+li...@gmail.com wrote:
On Mon, Jun 01, 2015 at 10:51:24AM +, Zhihao Ding wrote:
Hi there,
I am trying to find a way to automatically resize tables
in the latex output.
When doing slides in beamer, I use this to resize tables
to fit in a frame
#+LaTeX: \scriptsize{\resizebox{\textwidth}{!}{
| . | . |
#+LaTeX: }}
While when writing reports, I use the following instead
as I need to cross reference it by the name
#+CAPTION: table caption
#+NAME: table:label
| . | . |
then I loose the resize facility. How could I combine
the two? I tried to fiddle with
#+ATTR_LATEX but didn’t mange to make it work.
I don't follow. Why do you say you lose the facility? The following:
#+LaTeX: \scriptsize{\resizebox{\textwidth}{!}{
#+CAPTION: table caption
#+NAME: table:label
| . | . |
| . | . |
#+LaTeX: }}
exports as:
\scriptsize{\resizebox{\textwidth}{!}{
\begin{table}[htb]
\caption{\label{tab:orgtable1}
table caption}
\centering
\begin{tabular}{ll}
. .\\
. .\\
\end{tabular}
\end{table}
}}
Isn't that exactly what you want?
--
Suvayu
Open source is the future. It sets us free.
Re: [O] resize table in latex
Thanks. This idea works, based on which I used the following
in the end.
#+NAME: tbl:lab
#+ATTR_LATEX: :caption \caption[short]{\label{tbl:lab} long.}
\scriptsize{\resizebox{\textwidth}{!} \centering
It does’t look very org like but is good that it works.
Thanks,
Zhihao
On 2 Jun 2015, at 10:06, Suvayu Ali fatkasuvayu+li...@gmail.com wrote:
On Tue, Jun 02, 2015 at 08:43:07AM +, Zhihao Ding wrote:
Thanks very much for your reply. The proposed method
in this reply won’t work. It needs to be in the following
structure where this line
“\scriptsize{\resizebox{\textwidth}{!}{“
is after “\begin{table}[htb]” and immediately before
“\begin{tabular}{rr}”.
Why is that? Is it because table is a float?
You could try repurposing the :caption attribute. See:
(info (org) LaTeX specific attributes)
Hope this helps,
--
Suvayu
Open source is the future. It sets us free.
[O] resize table in latex
Hi there,
I am trying to find a way to automatically resize tables
in the latex output.
When doing slides in beamer, I use this to resize tables
to fit in a frame
#+LaTeX: \scriptsize{\resizebox{\textwidth}{!}{
| . | . |
#+LaTeX: }}
While when writing reports, I use the following instead
as I need to cross reference it by the name
#+CAPTION: table caption
#+NAME: table:label
| . | . |
then I loose the resize facility. How could I combine
the two? I tried to fiddle with
#+ATTR_LATEX but didn’t mange to make it work.
Thanks very much!
Zhihao
[O] float control in org
Hi there,
Could I ask for some advice on using the latex float
package in org mode? I’d like to have some control on
the positions of the figures, tables, code blocks etc.
Currently I am doing it using latex entirely, just for
my code blocks, as below
#+BEGIN_LaTeX
\floatstyle{ruled}
\newfloat{Program}{tbp}{lop}[section]
\begin{Program}
\begin{verbatim}
./somescripts.sh —someargs
\end{verbatim}
\caption{my caption}
\label{mylabel}
\end{Program}
#+END_LaTeX
There must be better ways of doing this?
Thanks very much!
Zhihao
Re: [O] float control in org
Thanks a lot Rasmus.
Zhihao
On 22 May 2015, at 11:07, Rasmus ras...@gmx.us wrote:
Zhihao Ding zhihao.d...@imm.ox.ac.uk writes:
Hi there,
Could I ask for some advice on using the latex float
package in org mode? I’d like to have some control on
the positions of the figures, tables, code blocks etc.
Currently I am doing it using latex entirely, just for
my code blocks, as below
#+BEGIN_LaTeX
\floatstyle{ruled}
\newfloat{Program}{tbp}{lop}[section]
\begin{Program}
\begin{verbatim}
./somescripts.sh someargs
\end{verbatim}
\caption{my caption}
\label{mylabel}
\end{Program}
#+END_LaTeX
There must be better ways of doing this?
Maybe something like this
#+latex_header: \floatstyle{ruled}
#+latex_header: \newfloat{program}{tbp}{lop}[section]
#+caption: my program
#+begin_program
#+BEGIN_SRC sh
./somescripts.sh someargs
#+END_SRC
#+end_program
—Rasmus
--
It was you, Jezebel, it was you
Re: [O] position figures side by side in PDF output
Thanks a lot Andreas and Rasmus! The solution using the subcaption package works best for me. Best, Zhihao On 20 May 2015, at 22:03, Andreas Leha andreas.l...@med.uni-goettingen.de wrote: Hi Zhihao, Rasmus ras...@gmx.us writes: Hi Zhihao, Zhihao Ding zhihao.d...@imm.ox.ac.uk writes: Could anyone give me some advice on how to position figures side by side in PDF output? I am trying to write a report, while my figures were all originally produced individually. I’d like to put them, mostly two, sometimes three, side by side sharing a same caption and label. Below is the syntax I am using now, which can only do one figure. Does this thread answer your question? It would give you individual subcaptions, but you need not use them. https://lists.gnu.org/archive/html/emacs-orgmode/2014-11/msg00548.html Otherwise you could use e.g. imagemagick to stick together figures. As an alternative you could use a table. + easy + orgmode only (should work across backends) - no scaling of images - it is a table for latex (i.e. will appear in list of tables, etc.) Here is a short example for the table approach and an imagemagick-based solution as proposed by Rasmus. --8---cut here---start-8--- * generate images:noexport: #+name: image1 #+begin_src R :results graphics :file img1.pdf plot(1:10) #+end_src #+results: image1 [[file:img1.pdf]] #+name: image2 #+begin_src R :results graphics :file img2.pdf plot(1:5) #+end_src #+results: image2 [[file:img2.pdf]] * export side-by-side ** table #+caption: stitching side-by-side using tables | [[file:img1.pdf]] | [[file:img2.pdf]] | ** using imagemagick *** function :noexport: #+name: sidebyside #+begin_src sh :session none :results file replace :var im1=im1.png :var im2=im2.png :var outname=out.png convert $im1 $im2 +append $outname echo $outname #+end_src *** test #+name: combinedfig #+call: sidebyside(im1=img1.pdf, im2=img2.pdf) :results file #+caption: stitching side-by-side using imagemagick #+results: combinedfig [[file:out.png]] --8---cut here---end---8--- Regards, Andreas
[O] position figures side by side in PDF output
Hi there, Could anyone give me some advice on how to position figures side by side in PDF output? I am trying to write a report, while my figures were all originally produced individually. I’d like to put them, mostly two, sometimes three, side by side sharing a same caption and label. Below is the syntax I am using now, which can only do one figure. #+BEGIN_CENTER #+CAPTION[My short Caption]: my long caption #+NAME: fig:label #+ATTR_LATEX: :options page=1 :width \textwidth [[/path/to/my/figure1]] #+END_CENTER Thanks a lot! Zhihao
Re: [O] navigate between source code blocks
Thank guys. Wolf is new to me and I am trying it now, it already feels very attractive! This increases my navigation efficiency quite a bit! Zhihao On 30 Apr 2015, at 18:25, Oleh Krehel ohwoeo...@gmail.com wrote: Leo Ufimtsev lufim...@redhat.com writes: Worf I think is a bit on the vi side of things. Helm is more generic. Worf is as much on the vi side of things, as `org-use-speed-commands' are. Almost not at all. It just takes vi-style hjkl arrows, because Emacs-style bnpf arrows aren't convenient. And it's got the best Helm implementation for navigating to headings. I've just added named blocks to this list as well. Screenshot: http://oremacs.com/download/worf-goto.png. The command to call is M-x `worf-goto' or g while in `worf-mode'. Oleh
Re: [O] navigate between source code blocks
Thanks very much Oleh. Best, Zhihao On 28 Apr 2015, at 08:22, Oleh Krehel ohwoeo...@gmail.com wrote: Hi Zhihao, I’ve got a simple question: how to speed up jumping between code blocks? You might be interested in https://github.com/abo-abo/worf. It allows you to traverse anything that starts with * or #+ with just hjkl keys. See the docs here: http://oremacs.com/worf/README.html. regards, Oleh
[O] navigate between source code blocks
Dear Org experts, I’ve got a simple question: how to speed up jumping between code blocks? My org file grows larger every day with more and more source code blocks. I find myself spending increasing amount of time finding the right code blocks to go to. Could anyone suggest a method to increase efficiency? So far I’ve tried (1) simple search and (2) C-c C-v g, which for some reason often fails to find blocks. Thanks very much! Zhihao
[O] latex options
Dear Org experts, I was wondering if anyone could advise on this simple problem. My toy org file, shown as below, contains 3 projects. I’d like to export beamer PDFs for individual projects from time to time, but the pain is that I always need to modify the header options (title, select_tags etc) to match the project that I want to export. The question is what the best way is to organise the options for multiple projects? Ideally I’d like to put a copy of the options under each project, so that I only need to define them once. It’d be even better if I could specify the file that I want the project to be exported to instead of the same pdf file matching my org file. #+TITLE: mytitle #+AUTHOR: myself #+DATE: \today #+LaTeX_CLASS: mybeamer #+SELECT_TAGS: export #+EXCLUDE_TAGS: noexport #+OPTIONS: H:4 toc:nil *: ** project 1 ** project 2 ** project 3 Thanks a lot! Zhihao
Re: [O] latex options
Thanks Andreas! This is very helpful.
I am using tags to control how verbose I want my export to be
and currently they differ slightly between projects. Quite often
I also have project specific tags. But no problem I think that’s
manageable with the layout you suggested.
Best,
Zhihao
On 30 Mar 2015, at 11:32, Andreas Leha andreas.l...@med.uni-goettingen.de
wrote:
Hi Zhihao,
Zhihao Ding zhihao.d...@imm.ox.ac.uk writes:
Dear Org experts,
I was wondering if anyone could advise on this simple problem.
My toy org file, shown as below, contains 3 projects. I’d like to
export beamer PDFs for individual projects from time to time,
but the pain is that I always need to modify the header options
(title, select_tags etc) to match the project that I want to export.
The question is what the best way is to organise the options for
multiple projects? Ideally I’d like to put a copy of the options
under each project, so that I only need to define them once.
It’d be even better if I could specify the file that I want the project
to be exported to instead of the same pdf file matching my org
file.
#+TITLE: mytitle
#+AUTHOR: myself
#+DATE: \today
#+LaTeX_CLASS: mybeamer
#+SELECT_TAGS: export
#+EXCLUDE_TAGS: noexport
#+OPTIONS: H:4 toc:nil *:
** project 1
** project 2
** project 3
You can add most of these keywords to the properties of a subtree by
prepending them with 'export_'. I am not sure about the select tags,
though. Why do you need them to differ between the projects?
Your Example:
--8---cut here---start-8---
#+TITLE: mytitle
#+AUTHOR: myself
#+DATE: \today
#+LaTeX_CLASS: mybeamer
#+SELECT_TAGS: export
#+EXCLUDE_TAGS: noexport
#+OPTIONS: H:4 toc:nil *:
** project 1
:PROPERTIES:
:header-args:R: :session *mysession1*
:header-args: :cache yes
:EXPORT_TITLE: mytitle 1
:EXPORT_LaTeX_HEADER: \subtitle{mysubtitle 1}
:EXPORT_FILE_NAME: myfile1
:EXPORT_DATE: mydate 1
:EXPORT_LaTeX_CLASS: mybeamer 1
:EXPORT_OPTIONS: H:2 toc:nil
:END:
** project 2
:PROPERTIES:
:header-args:R: :session *mysession2*
:header-args: :cache yes
:EXPORT_TITLE: mytitle 2
:EXPORT_LaTeX_HEADER: \subtitle{mysubtitle 2}
:EXPORT_FILE_NAME: myfile2
:EXPORT_DATE: mydate 2
:EXPORT_LaTeX_CLASS: mybeamer 2
:EXPORT_OPTIONS: H:2 toc:nil
:END:
** project 3
:PROPERTIES:
:header-args:R: :session *mysession3*
:header-args: :cache yes
:EXPORT_TITLE: mytitle 3
:EXPORT_LaTeX_HEADER: \subtitle{mysubtitle 3}
:EXPORT_FILE_NAME: myfile3
:EXPORT_DATE: mydate 3
:EXPORT_LaTeX_CLASS: mybeamer 3
:EXPORT_OPTIONS: H:2 toc:nil
:END:
--8---cut here---end---8---
HTH,
Andreas
Re: [O] shrink latex table to fit beamer slide
Thanks guys, in the end using R to round numbers and latex
resizebox to shrink table fonts as Andreas suggested works
best for me.
Cheers,
Zhihao
#+name: origtable
| 124.195548 |310.528 |
| 120.848541 | 122.70234 |
#+name: formatorigtable
#+begin_src R :var origtable=origtable :colnames yes
origtable[,1:2] - format(origtable[,1:2], digits=3)
origtable
#+end_src
#+results: formatorigtable
#+LaTeX: \resizebox{\textwidth}{!}{
| 124.195 |310.528 |
| 120.848 | 122.702 |
#+LaTeX: }
On 6 Dec 2014, at 11:04, Eric S Fraga e.fr...@ucl.ac.uk wrote:
On Friday, 5 Dec 2014 at 14:39, Zhihao Ding wrote:
Thanks a lot Andreas. Is there a way to globally
shrink/resize table for latex export without having
Beamer allows for shrinking of a whole frame to ensure it fits:
--8---cut here---start-8---
* Frame title
:PROPERTIES:
:BEAMER_optimisation: shrink
:END:
| my | table |
| et | cetera |
--8---cut here---end---8---
The shrink option can also specify a percentage, as in shrink=20.
--
: Eric S Fraga (0xFFFCF67D), Emacs 25.0.50.1, Org release_8.3beta-581-g0e52f0
[O] shrink latex table to fit beamer slide
Dear Org experts,
I am trying to fit a slightly wide latex table into a beamer
slide in org. Below is my current solution and I was wondering
if anyone can offer some advice on improving it.
#+begin_scriptsize
#+ATTR_LATEX: :align p{1cm} p{0.5cm} p{1cm}
| | | 7 |
| Site | Ind | -log10.pval |
| 123279713 | 1 | 6.006102 |
| 123279713 | 2 | 6.274326 |
| 123279713 | 4 | 6.210920 |
| 123279710 | 4 | 97.163695 |
| 123279710 | 5 | 208.841892 |
#+end_scriptsize
In this solution, the issues are: (1) N for column width
doesn’t seem to round text for latex output, and (2) I need
to define column width in addition to N.
I’d like to seek a solution that just shrinks the table to fit
the text width without this fiddling.
Many thanks,
Zhihao
Re: [O] shrink latex table to fit beamer slide
Thanks a lot Andreas. Is there a way to globally
shrink/resize table for latex export without having
to define column width like this
“:align p{1cm} p{0.5cm} p{1cm}” ?
I am hopting to do something like width=\textwidth
and leave the rest to org for finding suitable font
sizes.
Zhihao
On 5 Dec 2014, at 13:12, Andreas Leha andreas.l...@med.uni-goettingen.de
wrote:
Hi Zhihao,
Zhihao Ding zhihao.d...@imm.ox.ac.uk writes:
Dear Org experts,
I am trying to fit a slightly wide latex table into a beamer
slide in org. Below is my current solution and I was wondering
if anyone can offer some advice on improving it.
#+begin_scriptsize
#+ATTR_LATEX: :align p{1cm} p{0.5cm} p{1cm}
| | | 7 |
| Site | Ind | -log10.pval |
| 123279713 | 1 | 6.006102 |
| 123279713 | 2 | 6.274326 |
| 123279713 | 4 | 6.210920 |
| 123279710 | 4 | 97.163695 |
| 123279710 | 5 | 208.841892 |
#+end_scriptsize
In this solution, the issues are: (1) N for column width
doesn’t seem to round text for latex output, and (2) I need
to define column width in addition to N.
I’d like to seek a solution that just shrinks the table to fit
the text width without this fiddling.
Many thanks,
Zhihao
first:
you can set the font size in the #+ATTR_LATEX: line with
#+ATTR_LATEX: :font \scriptsize
second:
If you want to get the numbers rounded, you can either
(a) use babel or
(b) use the spreadsheet capabilities.
In both cases, you'll generate a new table which you want to export
example:
--8---cut here---start-8---
* orig table :noexport:
#+name: origtable
| | | 7 |
| Site | Ind | -log10.pval |
| 123279713 | 1 | 6.006102 |
| 123279713 | 2 | 6.274326 |
| 123279713 | 4 | 6.210920 |
| 123279710 | 4 | 97.163695 |
| 123279710 | 5 | 208.841892 |
* the table formatted with babel
This (untested!) used to work, but due to a bug [fn:1] does not.
#+name: formatorigtable
#+begin_src R :var origtable=origtable :colnames yes
origtable[,3] - format(origtable[,3], digits=3)
origtable
#+end_src
#+ATTR_LATEX: :align p{1cm} p{0.5cm} p{1cm}
#+results: formatorigtable
* the table formatted with calc/orgmode
This is quite complicated but works.
| | | 7 |
| Site | Ind | -log10.pval |
|---+-+-|
| 123279713 | 1 |6.01 |
| 123279713 | 2 |6.27 |
| 123279713 | 4 |6.21 |
| 123279710 | 4 | 97.16 |
| 123279710 | 5 | 208.84 |
#+TBLFM: $1=remote(origtable, @@#$1)::$2=remote(origtable,
@@#$2)::$3=remote(origtable, @@#$3); f-2
* Footnotes
[fn:1] I am unable to locate the thread about this for some strange reason.
The messages were sent between 2014-10-14 and 2014-10-16.
--8---cut here---end---8---
Best,
Andreas
[O] include a specific PDF page to org beamer
Hi there,
I was wondering if there is a way to import a specific PDF page
in org beamer?
I tried the following ways but neither 1 or 2 worked and I had to
retreat to 3, which is a pain as it requires those extra lines for
each link.
1.
[[file:~/path/to/myfigure.pdf::10]]
2.
#+ATTR_LATEX: page=10
[[file:~/path/to/myfigure.pdf]]
3.
#+begin_LaTeX
\includegraphics[page=10]{file:~/path/to/myfigure.pdf}
#+end_LaTeX
Many thanks!
Zhihao
