Re: org-cite and pandoc
On Saturday, 7 Aug 2021 at 22:09, Nicolas Goaziou wrote: > Would you have an ECM? I cannot reproduce it. Unfortunately, I cannot reproduce it with emacs -Q [1]. Has to be something in my configuration but I have no idea what. No time at present to bisect etc. but I will in due course hopefully. Sorry for the noise. thank you, eric Footnotes: [1] the one real disadvantage of using Emacs as my window manager, i.e. exwm, is the hassle involved in actually running Emacs with -Q. :-( -- : Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-617-g926dba : Latest paper written in org: https://arxiv.org/abs/2106.05096
Re: org-cite and pandoc
Hello, Eric S Fraga writes: > By the way, ox-md also fails if there is a #+bibliography > line. Removing it allows for the export. Very strange. Would you have an ECM? I cannot reproduce it. Regards, -- Nicolas Goaziou
Re: org-cite and pandoc
By the way, ox-md also fails if there is a #+bibliography line. Removing it allows for the export. Very strange. -- : Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-607-g185706 : Latest paper written in org: https://arxiv.org/abs/2106.05096
Re: org-cite and pandoc
On Thursday, 5 Aug 2021 at 15:41, Eric S Fraga wrote: > that expects submissions in pandoc (never had this before) which (in Ignore this, by the way; I meant to type markdown, not pandoc. -- : Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-607-g185706 : Latest paper written in org: https://arxiv.org/abs/2106.05096
Re: org-cite and pandoc
On Thursday, 5 Aug 2021 at 11:29, Bruce D'Arcus wrote: > Never heard of that before either; very cool! See my update... markdown, not pandoc. Although pandoc's native format is quite useful, just not readable. ;-) -- : Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-607-g185706 : Latest paper written in org: https://arxiv.org/abs/2106.05096
Re: org-cite and pandoc
On Thu, Aug 5, 2021 at 10:41 AM Eric S Fraga wrote: > This is for a journal that expects submissions in pandoc (never had this > before) which (in > some ways) is nice as at least it's not Word... Never heard of that before either; very cool! Bruce
Re: org-cite and pandoc
After some investigation... It seems that the presence of the #+bibliography: line is what causes ox-pandoc to fail. Removing this line is sufficient for me to get the export working. Thanks again, eric -- : Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-607-g185706 : Latest paper written in org: https://arxiv.org/abs/2106.05096
Re: org-cite and pandoc
On Thursday, 5 Aug 2021 at 17:00, András Simonyi wrote: > Perhaps a useful workaround would be to first "export to Org" (with > org-org-export-as-org)? Excellent suggestion! Thank you. Doing so clearly indicates that my problem is *not* with org-cite but with ox-pandoc. Strange. I had mentioned that ox-pandoc was in org-contrib; it is not. It is in MELPA. Okay, I will need to investigate further. There must be something in my configuration that is affecting ox-pandoc as others seem to be using it just fine. Thanks again, eric -- : Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-607-g185706 : Latest paper written in org: https://arxiv.org/abs/2106.05096
Re: org-cite and pandoc
Perhaps a useful workaround would be to first "export to Org" (with org-org-export-as-org)? AFAICS this replaces the Org cites with their export processor-rendered counterparts, e.g., with suitable Natbib cite commands when the #+cite_export: natbib line is used. best regards, András On Thu, 5 Aug 2021 at 16:41, Eric S Fraga wrote: > Indeed but even exporting without error would be good, assuming of > course that the error I reported is actually due to org-cite. It might > not be; I've never exported to pandoc before! This is for a journal > that expects submissions in pandoc (never had this before) which (in > some ways) is nice as at least it's not Word... > -- > : Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-607-g185706 > : Latest paper written in org: https://arxiv.org/abs/2106.05096 >
Re: org-cite and pandoc
On Thursday, 5 Aug 2021 at 10:13, Bruce D'Arcus wrote: > Yeah, ideally ox-pandoc would be updated to support org-cite. Indeed but even exporting without error would be good, assuming of course that the error I reported is actually due to org-cite. It might not be; I've never exported to pandoc before! This is for a journal that expects submissions in pandoc (never had this before) which (in some ways) is nice as at least it's not Word... -- : Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-607-g185706 : Latest paper written in org: https://arxiv.org/abs/2106.05096
Re: org-cite and pandoc
Yeah, ideally ox-pandoc would be updated to support org-cite.
I also, FYI, submitted an issue to pandoc awhile ago to update it's
org-cite support (it has support for an early draft).
https://github.com/jgm/pandoc/issues/7329
On Thu, Aug 5, 2021 at 10:07 AM Eric S Fraga wrote:
>
> Dear list,
>
> I am needing to export a document, written in org using the new cite
> syntax, to pandoc (native). The export fails. I realise that org-cite
> is new and I don't expect the export to process any [cite:@key] lines
> properly but it would be good to have the export at least generate a
> pandoc file I can then work with. Is this possible?
>
> I recognise fully that ox-pandoc is in contrib so I don't expect
> anything as such! In the meantime, I'll simply remove all [cite:]
> entries but I thought I'd raise this issue.
>
> The error (with paths elided and lines truncated) I get is:
>
> --8<---cut here---start->8---
> Debugger entered--Lisp error: (wrong-type-argument stringp ("..."))
> split-string(("...") "\n")
> (cons (car it) (split-string val "\n"))
> (list (cons (car it) (split-string val "\n")))
> (progn (list (cons (car it) (split-string val "\n"
> (if val (progn (list (cons (car it) (split-string val "\n")
> (let ((val (plist-get info (cdr it (if val (progn (list (cons (car it)
> (split-string val "\n"))
> (closure ((info :export-options nil :back-end ...
> mapcar((closure ((info :export-options nil :back-end #s(org-export-backend
> :name pandoc
> (apply 'append (mapcar #'(lambda (it) (ignore it) (let ((val (plist-get
> info ...)))
> (org-pandoc-put-options (apply 'append (mapcar #'(lambda (it) (ignore it)
> org-pandoc-template(#("#+cite_export: natbi..." [...]))
> org-export-as(pandoc nil nil nil (:output-file "paper.tmpLAj6YU.org"))
> org-export-to-file(pandoc "paper.tmpLAj6YU.org"
> org-pandoc-export(native nil nil nil nil nil 0)
> org-pandoc-export-to-native-and-open(nil nil nil nil)
> org-export-dispatch(nil)
> funcall-interactively(org-export-dispatch nil)
> command-execute(org-export-dispatch)
> --8<---cut here---end--->8---
>
>
> Thank you,
> eric
>
> --
> : Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-607-g185706
> : Latest paper written in org: https://arxiv.org/abs/2106.05096
>
org-cite and pandoc
Dear list,
I am needing to export a document, written in org using the new cite
syntax, to pandoc (native). The export fails. I realise that org-cite
is new and I don't expect the export to process any [cite:@key] lines
properly but it would be good to have the export at least generate a
pandoc file I can then work with. Is this possible?
I recognise fully that ox-pandoc is in contrib so I don't expect
anything as such! In the meantime, I'll simply remove all [cite:]
entries but I thought I'd raise this issue.
The error (with paths elided and lines truncated) I get is:
--8<---cut here---start->8---
Debugger entered--Lisp error: (wrong-type-argument stringp ("..."))
split-string(("...") "\n")
(cons (car it) (split-string val "\n"))
(list (cons (car it) (split-string val "\n")))
(progn (list (cons (car it) (split-string val "\n"
(if val (progn (list (cons (car it) (split-string val "\n")
(let ((val (plist-get info (cdr it (if val (progn (list (cons (car it)
(split-string val "\n"))
(closure ((info :export-options nil :back-end ...
mapcar((closure ((info :export-options nil :back-end #s(org-export-backend
:name pandoc
(apply 'append (mapcar #'(lambda (it) (ignore it) (let ((val (plist-get info
...)))
(org-pandoc-put-options (apply 'append (mapcar #'(lambda (it) (ignore it)
org-pandoc-template(#("#+cite_export: natbi..." [...]))
org-export-as(pandoc nil nil nil (:output-file "paper.tmpLAj6YU.org"))
org-export-to-file(pandoc "paper.tmpLAj6YU.org"
org-pandoc-export(native nil nil nil nil nil 0)
org-pandoc-export-to-native-and-open(nil nil nil nil)
org-export-dispatch(nil)
funcall-interactively(org-export-dispatch nil)
command-execute(org-export-dispatch)
--8<---cut here---end--->8---
Thank you,
eric
--
: Eric S Fraga via Emacs 28.0.50, Org release_9.4.6-607-g185706
: Latest paper written in org: https://arxiv.org/abs/2106.05096
