Re: [EMBOSS] Documentation suggestion for preg/dreg

2012-05-14 Thread Peter Rice

On 05/14/12 17:51, Peter Cock wrote:

Dear EMBOSS,

I would find it helpful if the "see also" documentation for preg and
dreg referenced each other (since they are both regex based sequence
searching tools).

http://emboss.open-bio.org/wiki/Appdoc:Dreg#See_also
http://emboss.open-bio.org/wiki/Appdoc:Preg#See_also


An interesting challenge.

The "See also" documentation is generated by finding all programs in the 
same group (the "groups:" application attribute in the ACD file).


These are classified as Nucleic:Motifs and Protein:Motifs so they are 
currently kept apart. We'll have a look and see if a general "regular 
expression search" (or similar) group would be useful ... and similar 
general groups for other applications.


regards,

Peter Rice
EMBOSS Team
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[EMBOSS] Documentation suggestion for preg/dreg

2012-05-14 Thread Peter Cock
Dear EMBOSS,

I would find it helpful if the "see also" documentation for preg and
dreg referenced each other (since they are both regex based sequence
searching tools).

http://emboss.open-bio.org/wiki/Appdoc:Dreg#See_also
http://emboss.open-bio.org/wiki/Appdoc:Preg#See_also

Thanks,

Peter
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