Re: [EMBOSS] Jemboss: accessing saved pepwindow results
Hi Mahmut, Fantastic, thanks! After rebuilding with the most recent ShowResultSet.java, double-clicking on a pepwindow saved result, or on pepwindow1.dat in File Manager now displays the graph as expected. With best regards, Daniel From: Mahmut Uludag [ulu...@ebi.ac.uk] Sent: Sunday, September 23, 2012 11:44 AM To: Rozenbaum, Daniel (Biocceleration Inc) Cc: emboss@lists.open-bio.org Subject: Re: [EMBOSS] Jemboss: accessing saved pepwindow results Hi Daniel, > subsequent attempts to view the saved "pepwindow" results fail: when > double-clicked on in the "Saved results list on server" window, a "Saved > Results" window opens with a single tab named "pepwindow1.dat" in the tab , > but the window is blank. I'm not able to reproduce it with J/Emboss 6.5 client. I will later check with J/Emboss 6.4. > The same thing happens when double-clicking on "pepwindow1.dat" in the Remote > pan of File Manager. I have tried updating the ShowResultSet class in package org.emboss.jemboss.gui to fix this problem. It looks working for me. > Were we incorrect in expecting that calling up "pepwindow1.dat" would either > display the image using Jemboss Graphics again or show the file contents as > text? No. After above modification I'm able to see the images displayed. I will next try to understand the string-encoding related problem you posted. Mahmut ___ EMBOSS mailing list EMBOSS@lists.open-bio.org http://lists.open-bio.org/mailman/listinfo/emboss
Re: [EMBOSS] Jemboss: accessing saved pepwindow results
Hi Daniel, subsequent attempts to view the saved "pepwindow" results fail: when double-clicked on in the "Saved results list on server" window, a "Saved Results" window opens with a single tab named "pepwindow1.dat" in the tab , but the window is blank. I'm not able to reproduce it with J/Emboss 6.5 client. I will later check with J/Emboss 6.4. The same thing happens when double-clicking on "pepwindow1.dat" in the Remote pan of File Manager. I have tried updating the ShowResultSet class in package org.emboss.jemboss.gui to fix this problem. It looks working for me. Were we incorrect in expecting that calling up "pepwindow1.dat" would either display the image using Jemboss Graphics again or show the file contents as text? No. After above modification I'm able to see the images displayed. I will next try to understand the string-encoding related problem you posted. Mahmut ___ EMBOSS mailing list EMBOSS@lists.open-bio.org http://lists.open-bio.org/mailman/listinfo/emboss
[EMBOSS] Jemboss: accessing saved pepwindow results
Hi, We currently have EMBOSS built and installed without PNG/GD support. When we run "pepwindow" and select "Jemboss Graphics" as the graph format, the file pepwindow1.dat is, from what we're able to tell, correctly created, and Jemboss displays the graph in the Saved Results window, from which it is possible to save the graph to a local PNG image file. However, subsequent attempts to view the saved "pepwindow" results fail: when double-clicked on in the "Saved results list on server" window, a "Saved Results" window opens with a single tab named "pepwindow1.dat" in the tab , but the window is blank. The same thing happens when double-clicking on "pepwindow1.dat" in the Remote pan of File Manager. Were we incorrect in expecting that calling up "pepwindow1.dat" would either display the image using Jemboss Graphics again or show the file contents as text? Many thanks, Daniel -- Daniel Rozenbaum Biocceleration, Inc. OCIO/ Office of Application Engineering & Development/ Patent System Division 600 Dulany St. Alexandria, VA 22314 ___ EMBOSS mailing list EMBOSS@lists.open-bio.org http://lists.open-bio.org/mailman/listinfo/emboss
