[cvs] dists/10.4/unstable/main/finkinfo/sci zimpl.info,1.2,1.3
Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci In directory sc8-pr-cvs17:/tmp/cvs-serv2592 Modified Files: zimpl.info Log Message: update by maintainer Index: zimpl.info === RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/zimpl.info,v retrieving revision 1.2 retrieving revision 1.3 diff -u -d -r1.2 -r1.3 --- zimpl.info 27 Sep 2006 00:29:19 - 1.2 +++ zimpl.info 23 Sep 2007 02:16:15 - 1.3 @@ -1,5 +1,5 @@ Package: zimpl -Version: 2.05 +Version: 2.07 Revision: 1 Description: Modeling language for optimization problems License: GPL @@ -10,15 +10,14 @@ Depends: gmp-shlibs (>= 4.1.2) # Unpack Phase: -Source: http://www.zib.de/koch/zimpl/download/%n-%v.tgz -Source-MD5: 20cef862b75e567412b34b6dc484d8c0 -SourceDirectory: %n +Source: http://zimpl.zib.de/download/%n-%v.tgz +Source-MD5: bfc602cd0e9d8d2365457b3933f49ef1 +#SourceDirectory: %n # Patch Phase PatchScript: << echo "CPPFLAGS += -I%p/include" > make/local/make.`hostname` echo "LDFLAGS += -L%p/lib" >> make/local/make.`hostname` - ln -s make.darwin.ppc.gnu.opt make/make.darwin.x86.gnu.opt << # Compile Phase: - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-commits mailing list Fink-commits@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-commits
[cvs] dists/10.4/unstable/main/finkinfo/net xchat.info,1.12,1.13
Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/net In directory sc8-pr-cvs17:/tmp/cvs-serv12643/10.4/unstable/main/finkinfo/net Modified Files: xchat.info Log Message: New upstream version Index: xchat.info === RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/net/xchat.info,v retrieving revision 1.12 retrieving revision 1.13 diff -u -d -r1.12 -r1.13 --- xchat.info 24 Dec 2006 17:05:36 - 1.12 +++ xchat.info 22 Sep 2007 21:20:28 - 1.13 @@ -15,14 +15,14 @@ # maintainership of) the affected package. Package: xchat -Version: 2.6.8 -Revision: 1022 +Version: 2.8.2 +Revision: 1021 Maintainer: Max Horn <[EMAIL PROTECTED]> BuildDepends: << system-openssl-dev, pkgconfig, - gtk+2-dev (>= 2.6.0-1), - gtk+2 (>= 2.6.0-1), + gtk+2-dev (>= 2.10.0-1), + gtk+2 (>= 2.10.0-1), atk1 (>= 1.2.2-3), pango1-xft2-dev, glib2-dev (>= 2.12.0-1), @@ -37,7 +37,7 @@ libiconv-dev << Depends: << - gtk+2-shlibs (>= 2.6.0-1), + gtk+2-shlibs (>= 2.10.0-1), gtkspell2-shlibs, pango1-xft2, dbus (>= 0.6.0-1), @@ -47,8 +47,8 @@ << Conflicts: xchat-ssl (<< 2.6.8-1022) Replaces: xchat-ssl (<< 2.6.8-1022) -Source: http://xchat.org/files/source/2.6/xchat-%v.tar.bz2 -Source-MD5: 940fd8560a4e4e5d905e53207c6cbb87 +Source: http://xchat.org/files/source/2.8/xchat-%v.tar.bz2 +Source-MD5: d87a93bcd39d96ff3a3d0f8199efcf12 Patch: %n.patch ConfigureParams: << --enable-openssl \ - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-commits mailing list Fink-commits@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-commits
[cvs] dists/10.4/unstable/main/finkinfo/sci scipy-py.patch,1.6,1.7
Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci
In directory sc8-pr-cvs17:/tmp/cvs-serv11811
Modified Files:
scipy-py.patch
Log Message:
don't build netcdf package
Index: scipy-py.patch
===
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/scipy-py.patch,v
retrieving revision 1.6
retrieving revision 1.7
diff -u -d -r1.6 -r1.7
--- scipy-py.patch 22 Sep 2007 16:16:47 - 1.6
+++ scipy-py.patch 22 Sep 2007 21:18:58 - 1.7
@@ -35,7 +35,7 @@
# Adaptation of Scientific.IO (2.4.9) to use NumPy
-#config.add_subpackage('netcdf')
-+config.add_subpackage('netcdf')
++#config.add_subpackage('netcdf')
# Finite Difference Formulae package
-#config.add_subpackage('fdfpack')
-
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[cvs] dists/10.4/unstable/main/finkinfo/sci scientificpython-py.info, 1.9, 1.10
Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci In directory sc8-pr-cvs17:/tmp/cvs-serv11003 Modified Files: scientificpython-py.info Log Message: fixed conflict Index: scientificpython-py.info === RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/scientificpython-py.info,v retrieving revision 1.9 retrieving revision 1.10 diff -u -d -r1.9 -r1.10 --- scientificpython-py.info22 Sep 2007 16:16:47 - 1.9 +++ scientificpython-py.info22 Sep 2007 21:17:08 - 1.10 @@ -25,7 +25,9 @@ mkdir -p %i/share/doc/%n/HTML mkdir -p %i/share/doc/%n/PDF mv %i/bin/bsp_virtual %i/bin/bsp_virtual%type_raw[python] + mv %i/bin/task_manager %i/bin/task_manager%type_raw[python] ln -s %p/bin/bsp_virtual%type_raw[python] %i/bin/bsp_virtual + ln -s %p/bin/task_manager%type_raw[python] %i/bin/task_manager cp -R Examples %i/share/doc/%n cp -R Doc/* %i/share/doc/%n << @@ -34,7 +36,7 @@ Conflicts: scientificpython-py22-bin, scientificpython-py23-bin, scientificpython-py24-bin Replaces: scientificpython-py22-bin, scientificpython-py23-bin, scientificpython-py24-bin Depends: scientificpython-py%type_pkg[python] (= %v-%r) - Files: bin/bsp_virtual + Files: bin/bsp_virtual bin/task_manager DocFiles: README LICENSE << License: OSI-Approved - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-commits mailing list Fink-commits@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-commits
[cvs] dists/10.4/unstable/main/finkinfo/sci scipy-py.info, 1.19, 1.20 scientificpython-py.info, 1.8, 1.9 scipy-py.patch, 1.5, 1.6 scientificpython-py.patch, 1.1, 1.2
Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci
In directory sc8-pr-cvs17:/tmp/cvs-serv23500
Modified Files:
scipy-py.info scientificpython-py.info scipy-py.patch
scientificpython-py.patch
Log Message:
new upstream version
Index: scipy-py.patch
===
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/scipy-py.patch,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -d -r1.5 -r1.6
--- scipy-py.patch 26 Aug 2007 12:22:56 - 1.5
+++ scipy-py.patch 22 Sep 2007 16:16:47 - 1.6
@@ -1,6 +1,20 @@
scipy/Lib/sandbox/setup.py.orig2006-09-08 10:34:46.0 -0600
-+++ scipy/Lib/sandbox/setup.py 2006-09-08 10:36:48.0 -0600
-@@ -47,40 +47,40 @@
+--- scipy/scipy/sandbox/setup.py.orig 2007-09-22 07:45:51.0 -0600
scipy/scipy/sandbox/setup.py 2007-09-22 07:45:57.0 -0600
+@@ -34,58 +34,58 @@
+ # check it in and screw other people up :-)
+
+ # An example package:
+-#config.add_subpackage('exmplpackage')
++config.add_subpackage('exmplpackage')
+
+ # Monte Carlo package
+ #config.add_subpackage('montecarlo')
+
+ # Robert Kern's corner:
+-#config.add_subpackage('rkern')
++config.add_subpackage('rkern')
+
+ # ODRPACK
#config.add_subpackage('odr')
# Delaunay triangulation and Natural Neighbor interpolation
@@ -17,7 +31,7 @@
# Statistical models
-#config.add_subpackage('models')
-+#config.add_subpackage('models')
++config.add_subpackage('models')
# Adaptation of Scientific.IO (2.4.9) to use NumPy
-#config.add_subpackage('netcdf')
@@ -33,7 +47,7 @@
# Interpolating between sparse samples
-#config.add_subpackage('buildgrid')
-+#config.add_subpackage('buildgrid')
++config.add_subpackage('buildgrid')
# Package for Support Vector Machine
-#config.add_subpackage('svm')
@@ -45,30 +59,19 @@
# David Cournapeau's corner: autocorrelation, lpc, lpc residual
-#config.add_subpackage('cdavid')
-+#config.add_subpackage('cdavid')
++config.add_subpackage('cdavid')
# New spline package (based on scipy.interpolate)
-#config.add_subpackage('spline')
+config.add_subpackage('spline')
+
+ # Radial basis functions package
+-#config.add_subpackage('rbf')
++config.add_subpackage('rbf')
- return config
+ # Multigrid Solvers
+-#config.add_subpackage('multigrid')
++config.add_subpackage('multigrid')
scipy/Lib/fftpack/setup.py.old 2007-08-23 14:40:09.0 -0400
-+++ scipy/Lib/fftpack/setup.py 2007-08-23 14:40:36.0 -0400
-@@ -30,7 +30,7 @@
- config.add_extension('_fftpack',
- sources=sources,
- libraries=['dfftpack'],
-- extra_info = fft_opt_info
-+ extra_info = [fft_opt_info, djbfft_info],
- )
- config.add_extension('convolve',
scipy/Lib/signal/filter_design.py.old 2007-08-20 22:43:50.0
-0400
-+++ scipy/Lib/signal/filter_design.py 2007-08-23 15:10:19.0 -0400
-@@ -1539,4 +1539,4 @@
- alpha = N//2
- m = numpy.arange(0,N)
- h = win*special.sinc(cutoff*(m-alpha))
--return h / sum(h,axis=0)
-+return h / numpy.sum(h,axis=0)
+ return config
Index: scientificpython-py.patch
===
RCS file:
/cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/scientificpython-py.patch,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- scientificpython-py.patch 20 Jan 2006 20:30:40 - 1.1
+++ scientificpython-py.patch 22 Sep 2007 16:16:47 - 1.2
@@ -1,20 +1,20 @@
ScientificPython/setup.py.orig Sat Feb 21 16:47:37 2004
-+++ ScientificPython/setup.py Sat Feb 21 16:48:34 2004
-@@ -32,7 +32,7 @@
- ['Src/Scientific_netcdf.c'],
- include_dirs=['Include', netcdf_include],
+--- ScientificPython/setup.py.orig 2007-09-22 07:31:15.0 -0600
ScientificPython/setup.py 2007-09-22 07:32:39.0 -0600
+@@ -61,7 +61,7 @@
+ include_dirs=['Include', netcdf_include]
+ + arrayobject_h_include,
library_dirs=[netcdf_lib],
-- libraries = ['netcdf'])]
-+ libraries = ['nc-dap','dap'])]
-
- packages = ['Scientific', 'Scientific.Functions',
- 'Scientific.Geometry', 'Scientific.IO',
ScientificPython/Src/Scientific_netcdf.c.orig Fri Sep 16 13:08:17 2005
-+++ ScientificPython/Src/Scientific_netcdf.c Fri Sep 16 13:08:54 2005
-@@ -11,7 +11,7 @@
+- libraries = ['netcdf'],
++ libraries = ['nc-dap',
[cvs] web/pdb browse.php, 1.1.2.28, 1.1.2.29 header.inc, 1.10.2.6, 1.10.2.7 package.php, 1.43.2.27, 1.43.2.28
Update of /cvsroot/fink/web/pdb
In directory sc8-pr-cvs17:/tmp/cvs-serv11328
Modified Files:
Tag: redesign_pdb
browse.php header.inc package.php
Log Message:
Enhance error reporting
Index: package.php
===
RCS file: /cvsroot/fink/web/pdb/package.php,v
retrieving revision 1.43.2.27
retrieving revision 1.43.2.28
diff -u -d -r1.43.2.27 -r1.43.2.28
--- package.php 10 Sep 2007 18:02:20 - 1.43.2.27
+++ package.php 22 Sep 2007 15:45:26 - 1.43.2.28
@@ -12,7 +12,7 @@
-No package specified.
+No package specified.
error during query: '.mysql_error().'';
+ print 'Error during db query (Package):
'.mysql_error().'';
} else {
$pkg2disp = mysql_fetch_array($qs);
}
@@ -79,9 +81,11 @@
$warning = '';
if (!$pkg2disp) { # No specific version found, try latest
$qtodisplay = $qtodisplay_sel."WHERE p.name='$package' ".$qtodisplay_order;
+ $error_level = error_reporting(E_ALL ^ E_NOTICE ^ E_WARNING);
$qs = mysql_query($qtodisplay, $dbh);
+ error_reporting($error_level);
if (!$qs) {
-print 'error during query: '.mysql_error().'';
+print 'Error during db query (Latest Package):
'.mysql_error().'';
} else {
$pkg2disp = mysql_fetch_array($qs);
}
@@ -178,7 +182,7 @@
$q .= "ORDER BY priority DESC";
$qdist = mysql_query($q, $dbh);
if (!$qdist) {
- die('error during query: '.mysql_error().'');
+ die('Error during db query (Distributions):
'.mysql_error().'');
}
$color_count = 0;
$last_identifier = '';
@@ -198,7 +202,7 @@
$q = "SELECT p.*, r.type, r.version AS rel_version FROM `package` p,
`release` r WHERE p.name = '$package' AND p.rel_id = r.rel_id AND r.dist_id='"
. $dist_row['dist_id'] . "' AND active='1' ORDER BY r.priority ASC";
$qrel = mysql_query($q, $dbh);
if (!$qrel) {
- die('error during query: '.mysql_error().'');
+ die('Error during db query (Releases):
'.mysql_error().'');
}
$pkg_release = array();
@@ -323,7 +327,7 @@
$q = "SELECT * FROM `package` WHERE rel_id='$pkg2disp[rel_id]' AND
parentname='$pkg2disp[name]' ORDER BY name";
$rs = mysql_query($q, $dbh);
if (!$rs) {
- print 'error during query: '.mysql_error().'';
+ print 'Error during db query (Splitoffs):
'.mysql_error().'';
} else {
if($row = mysql_fetch_array($rs))
it_item("SplitOffs:", link_to_package($row["name"], $version,
$rel_id, $row["descshort"]));
Index: header.inc
===
RCS file: /cvsroot/fink/web/pdb/header.inc,v
retrieving revision 1.10.2.6
retrieving revision 1.10.2.7
diff -u -d -r1.10.2.6 -r1.10.2.7
--- header.inc 10 Sep 2007 19:54:22 - 1.10.2.6
+++ header.inc 22 Sep 2007 15:45:26 - 1.10.2.7
@@ -32,7 +32,7 @@
$title .= $pispec;
$pdbroot = "../../";
} else {
-print 'PATH_INFO not in expected format!';
+print 'PATH_INFO not in expected format!';
exit;
}
$root = "-".$pdbroot;
@@ -59,8 +59,16 @@
/* connect to database */
include $fsroot."db.inc.php";
-$dbh = mysql_pconnect($db_host, $db_user, $db_passwd);
-mysql_select_db($db_name, $dbh);
+$error_level = error_reporting(E_ALL ^ E_NOTICE ^ E_WARNING);
+try {
+ $dbh = mysql_pconnect($db_host, $db_user, $db_passwd);
+ mysql_select_db($db_name, $dbh);
+}
+catch (Exception $e) {
+}
+error_reporting($error_level);
+if (!$dbh)
+ print 'Couldn\'t connect to database!';
// Read url parameters. We use basic HTML encoding for now, and
Index: browse.php
===
RCS file: /cvsroot/fink/web/pdb/browse.php,v
retrieving revision 1.1.2.28
retrieving revision 1.1.2.29
diff -u -d -r1.1.2.28 -r1.1.2.29
--- browse.php 10 Sep 2007 18:02:20 - 1.1.2.28
+++ browse.php 22 Sep 2007 15:45:25 - 1.1.2.29
@@ -115,7 +115,7 @@
$q .= "ORDER BY priority DESC";
$qdist = mysql_query($q, $dbh);
if (!$qdist) {
- die('Error in db query (distribution):
'.mysql_error().'');
+ die('Error during db query (distribution):
'.mysql_error().'');
}
$dist_values[''] = 'Any';
while ($dist = mysql_fetch_array($qdist)) {
@@ -140,7 +140,7 @@
$query = "SELECT * FROM sections ORDER BY name ASC";
$rs = mysql_query($query, $dbh);
if (!$rs) {
- print 'Error in db query (sections):
'.mysql_error().'';
+ print 'Error during db query (sections):
'.mysql_error().'';
} else {
$seccount = mysql_num_rows($rs);
while ($row = mysql_fetch_array($rs)) {
@@ -393,7 +393,7 @@
$rs = mysql_query($query, $dbh);
$time_sql_end = microtime_float();
if (!$rs) {
- print 'Error in db query (list packages):
'.mysql_error().'';
+ print 'Error during db query (list packages):
'.mysql_error().'';
} else {
$count = mysql_num_rows($rs);
-
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[cvs] scripts/pdb .cvsignore,1.4.2.3,1.4.2.4
Update of /cvsroot/fink/scripts/pdb In directory sc8-pr-cvs17:/tmp/cvs-serv7881 Modified Files: Tag: redesign_pdb .cvsignore Log Message: Remove files from cvsignore that should no longer be needed Index: .cvsignore === RCS file: /cvsroot/fink/scripts/pdb/.cvsignore,v retrieving revision 1.4.2.3 retrieving revision 1.4.2.4 diff -u -d -r1.4.2.3 -r1.4.2.4 --- .cvsignore 10 Sep 2007 20:22:02 - 1.4.2.3 +++ .cvsignore 22 Sep 2007 15:37:10 - 1.4.2.4 @@ -3,9 +3,6 @@ fink basepath *-stable.sql -current.sql current_pdb_dump.sql -timestamp.inc -maintlist.txt basepath_fink.inc htdocs_pdb.inc - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-commits mailing list Fink-commits@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-commits
[cvs] scripts/pdb HOWTO,1.10.2.7,1.10.2.8
Update of /cvsroot/fink/scripts/pdb In directory sc8-pr-cvs17:/tmp/cvs-serv6329 Modified Files: Tag: redesign_pdb HOWTO Log Message: Add explanations about all files in this dir Index: HOWTO === RCS file: /cvsroot/fink/scripts/pdb/HOWTO,v retrieving revision 1.10.2.7 retrieving revision 1.10.2.8 diff -u -d -r1.10.2.7 -r1.10.2.8 --- HOWTO 18 Sep 2007 17:52:51 - 1.10.2.7 +++ HOWTO 22 Sep 2007 15:32:55 - 1.10.2.8 @@ -1,3 +1,75 @@ +This HOWTO first explains the files in the scripts/pdb directory and then +describes common tasks involving pdb updating. + +- + +Files and directories in scripts/pdb: + +HOWTO: + This howto document +basepath: + Directory containing the Fink package description files. This is a cvs + checkout of the 'fink' module but might be overwritten by rsync on the pdb + server when refreshing the pdb (see below for details) +basepath_fink.inc: + Config file with the path to the pdb script files (the current dir) +current_pdb_dump.sql: + SQL statements produced by the dump script containing the current contents of + the pdb. +drop.sql: + SQL statements to drop all pdb tables in the db. Only needed to restart from + scratch. +dump: + Shell script to dump the package descriptions. Used by the dumprelease and refresh + scripts. +dumprelease: + Shell script to dump the package description of a Fink released (defined by + a CVS tag). See below for a description on how to use it. +fink: + A directory containing the Fink tree with the package description files. This + will be updated by the refresh and dumprelease scripts +.finkdbi: + Config file with the information on how to connect to the database via perl + (Could alternatively be located in ~/.finkdbi) +finksql: + Shell script to connect to the database via the shell +fix_permissions.sh: + Shell script to set the file permissions +inject: + Shell script to inject the sql statements in current_pdb_dump.sql into the db +pdb_full_update-piecewise: + Shell script to update the pdb (calling the refresh and inject scripts) + distribution after distribution (10.2-gcc3.3 10.3 10.4 10.5) + This script is called every 8 hours on finch using the follwoing cron line: +20 1,9,17 * * * root nice /opt/pdb/pdb_full_update-piecewise 2>&1 | \ +mail -s "Web-PDB Update `date`" [EMAIL PROTECTED] +pdb_full_update-unified: + Shell script to update the pdb (calling the refresh and inject scripts) + all in one step +refresh: + Shell script to refresh the package descriptions und dump them into + current_pdb_dump.sql. refresh is called by the pdb_full_update-* scripts +releases.sql: + SQL statements containing the information about current supported releases. + Needs to be updated whenever a release is added or no longer supported. See + below on how to use it. +*-stable.sql: + SQL statements containing the package information about Fink releases. Created + by the dumprelease script. +schema.sql: + SQL statements containing the database schema of the pdb. See below on how to + use it. +sections.sql: + SQL statements containing the information about the package sections. Needs to + be udpated whenever a new section is added. Called by the pdb_full_update-* + scripts. +update.sh: + Shell script to update the cvs directories and configure the local fink. See + below for more information. + + +- + Q: How do I update the package database? A: You normally should never have to do this since we have a cron script in - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-commits mailing list Fink-commits@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-commits
