Re: [Fink-users] Problem Plotting using Matplotlib-py26 and py27
On Feb 15, 2012, at 8:45, Sean Lake wrote:
On Feb 15, 2012, at 0:04, Martin Costabel wrote:
On 14/02/12 23:29, Sean Lake wrote:
[]
plt.savefig(asdf.pdf, pdf)
I think this is a symtax error on your part. If you use
plt.savefig(asdf.pdf, format=pdf)
it will work.
What is strange is that you are running
python2.7 (at least that's what is written in the first line of your
script), but your modules are taken from python2.6, as the error message
File /sw/lib/python2.6/site-packages/matplotlib/pyplot.py, line 363, in
savefig
indicates. This is not the cause of the error, however.
--
Martin
Hello all,
Excellent! That problem's fixed, now I get the following error. I've tried
moving /usr/local to make sure that my own texlive distribution isn't
interfering. I've also tried removing /usr/bin/env from the front of the
script, and that doesn't help, either. For what it's worth, I also get this
error when trying to run a script that used to work fine.
Last, there's nothing odd about the original error - I said I see the problem
in both python 2.6 and 2.7. I just copied the wrong one. :)
Thanks,
Sean
Hello again,
I've simplified the script and narrowed down the problem area to the attempt to
write the results out to pdf or svg. eps works fine, though. The script and
error messages follow.
Should I be moving this to the matplotlib list?
Thanks,
Sean
#!/usr/bin/env /sw/bin/python2.7 -i
import sys
#Clear scisoft out from the path search tree
i = 0
ssbase = /usr/local/scisoft
while i len(sys.path):
item = sys.path[i]
if ( item != and len(item) = len(ssbase) and
item[:len(ssbase)] == ssbase ):
del(sys.path[i])
else:
i += 1
del item, ssbase, i
import matplotlib
matplotlib.use(Agg)
import matplotlib.pyplot as plt
plt.plot( [ x for x in range(10)], [x for x in range(10)] )
ofmt = svg
plt.savefig(asdf. + ofmt, format=ofmt)
Error for svg:
Traceback (most recent call last):
File ./blah.py, line 25, in module
plt.savefig(asdf. + ofmt, format=ofmt)
File /sw/lib/python2.7/site-packages/matplotlib/pyplot.py, line 363, in
savefig
return fig.savefig(*args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/figure.py, line 1084, in
savefig
self.canvas.print_figure(*args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/backend_bases.py, line
1923, in print_figure
**kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/backend_bases.py, line
1754, in print_svg
return svg.print_svg(*args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/backends/backend_svg.py,
line 867, in print_svg
return self._print_svg(filename, svgwriter, fh_to_close, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/backends/backend_svg.py,
line 902, in _print_svg
self.figure.draw(renderer)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/figure.py, line 798, in draw
func(*args)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/axes.py, line 1946, in draw
a.draw(renderer)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/axis.py, line 1017, in draw
tick.draw(renderer)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/axis.py, line 234, in draw
self.label1.draw(renderer)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/text.py, line 571, in draw
self._fontproperties, angle)
File /sw/lib/python2.7/site-packages/matplotlib/backends/backend_svg.py,
line 587, in draw_tex
self.draw_text_as_path(gc, x, y, s, prop, angle, ismath=TeX)
File /sw/lib/python2.7/site-packages/matplotlib/backends/backend_svg.py,
line 528, in draw_text_as_path
_glyphs = text2path.get_glyphs_tex(prop, s, glyph_map=glyph_map)
File /sw/lib/python2.7/site-packages/matplotlib/textpath.py, line 282, in
get_glyphs_tex
self.tex_font_map = dviread.PsfontsMap(dviread.find_tex_file('pdftex.map'))
File /sw/lib/python2.7/site-packages/matplotlib/dviread.py, line 668, in
__init__
self._parse(file)
File /sw/lib/python2.7/site-packages/matplotlib/dviread.py, line 701, in
_parse
self._register(words)
File /sw/lib/python2.7/site-packages/matplotlib/dviread.py, line 727, in
_register
assert encoding is None
AssertionError
--
Virtualization Cloud
Re: [Fink-users] Problem Plotting using Matplotlib-py26 and py27
On 14/02/12 23:29, Sean Lake wrote: [] plt.savefig(asdf.pdf, pdf) I think this is a symtax error on your part. If you use plt.savefig(asdf.pdf, format=pdf) it will work. What is strange is that you are running python2.7 (at least that's what is written in the first line of your script), but your modules are taken from python2.6, as the error message File /sw/lib/python2.6/site-packages/matplotlib/pyplot.py, line 363, in savefig indicates. This is not the cause of the error, however. -- Martin -- Virtualization Cloud Management Using Capacity Planning Cloud computing makes use of virtualization - but cloud computing also focuses on allowing computing to be delivered as a service. http://www.accelacomm.com/jaw/sfnl/114/51521223/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
Re: [Fink-users] Problem Plotting using Matplotlib-py26 and py27
On Feb 15, 2012, at 0:04, Martin Costabel wrote:
On 14/02/12 23:29, Sean Lake wrote:
[]
plt.savefig(asdf.pdf, pdf)
I think this is a symtax error on your part. If you use
plt.savefig(asdf.pdf, format=pdf)
it will work.
What is strange is that you are running
python2.7 (at least that's what is written in the first line of your script),
but your modules are taken from python2.6, as the error message
File /sw/lib/python2.6/site-packages/matplotlib/pyplot.py, line 363, in
savefig
indicates. This is not the cause of the error, however.
--
Martin
Hello all,
Excellent! That problem's fixed, now I get the following error. I've tried
moving /usr/local to make sure that my own texlive distribution isn't
interfering. I've also tried removing /usr/bin/env from the front of the
script, and that doesn't help, either. For what it's worth, I also get this
error when trying to run a script that used to work fine.
Last, there's nothing odd about the original error - I said I see the problem
in both python 2.6 and 2.7. I just copied the wrong one. :)
Thanks,
Sean
Traceback (most recent call last):
File ./blah.py, line 34, in module
plt.savefig(asdf.pdf, format=pdf)
File /sw/lib/python2.7/site-packages/matplotlib/pyplot.py, line 363, in
savefig
return fig.savefig(*args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/figure.py, line 1084, in
savefig
self.canvas.print_figure(*args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/backend_bases.py, line
1923, in print_figure
**kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/backend_bases.py, line
1733, in print_pdf
return pdf.print_pdf(*args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/backends/backend_pdf.py,
line 2156, in print_pdf
self.figure.draw(renderer)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/figure.py, line 798, in draw
func(*args)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/axes.py, line 1946, in draw
a.draw(renderer)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/axis.py, line 1017, in draw
tick.draw(renderer)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/axis.py, line 234, in draw
self.label1.draw(renderer)
File /sw/lib/python2.7/site-packages/matplotlib/artist.py, line 55, in
draw_wrapper
draw(artist, renderer, *args, **kwargs)
File /sw/lib/python2.7/site-packages/matplotlib/text.py, line 571, in draw
self._fontproperties, angle)
File /sw/lib/python2.7/site-packages/matplotlib/backends/backend_pdf.py,
line 1549, in draw_tex
psfont = self.tex_font_mapping(dvifont.texname)
File /sw/lib/python2.7/site-packages/matplotlib/backends/backend_pdf.py,
line 1365, in tex_font_mapping
dviread.PsfontsMap(dviread.find_tex_file('pdftex.map'))
File /sw/lib/python2.7/site-packages/matplotlib/dviread.py, line 668, in
__init__
self._parse(file)
File /sw/lib/python2.7/site-packages/matplotlib/dviread.py, line 701, in
_parse
self._register(words)
File /sw/lib/python2.7/site-packages/matplotlib/dviread.py, line 727, in
_register
assert encoding is None
AssertionError
--
Virtualization Cloud Management Using Capacity Planning
Cloud computing makes use of virtualization - but cloud computing
also focuses on allowing computing to be delivered as a service.
http://www.accelacomm.com/jaw/sfnl/114/51521223/
___
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Re: [Fink-users] Problem Plotting using Matplotlib-py26 and py27
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On 2/14/12 5:29 PM, Sean Lake wrote: Hello all, I'm experiencing trouble with Matplotlib. Here is a short script that reproduces the error followed by the error. matplotlib-py27-1.0.1-1 matplotlib-py26-1.0.1-1 python26-2.6.7-3 python27-2.7.2-5 fink --version Package manager version: 0.32.2 Distribution version: selfupdate-rsync Tue Feb 14 14:23:59 2012, 10.6, x86_64 Trees: local/main stable/main stable/crypto unstable/main unstable/crypto #!/usr/bin/env /sw/bin/python2.7 -i ofmt = pdf import sys #Clear scisoft out from the path search tree i = 0 ssbase = /usr/local/scisoft while i len(sys.path): item = sys.path[i] if ( item != and len(item) = len(ssbase) and item[:len(ssbase)] == ssbase ): del(sys.path[i]) else: i += 1 del item, ssbase, i from numpy import * import scipy as sp import matplotlib #matplotlib.use(GTKAgg) matplotlib.use(Agg) import matplotlib.axes as mpax import matplotlib.ticker as pltck import matplotlib.figure as pltfig import matplotlib.pyplot as plt plt.close(all) plt.figure( 1 ) plt.plot( [ x for x in range(10)], [x for x in range(10)] ) plt.savefig(asdf.pdf, pdf) Error: Traceback (most recent call last): File stdin, line 1, in module File /sw/lib/python2.6/site-packages/matplotlib/pyplot.py, line 363, in savefig return fig.savefig(*args, **kwargs) File /sw/lib/python2.6/site-packages/matplotlib/figure.py, line 1084, in savefig self.canvas.print_figure(*args, **kwargs) TypeError: print_figure() got multiple values for keyword argument 'dpi' I can reproduce the failure using Sean's script. - -- Alexander Hansen, Ph.D. Fink User Liaison http://finkakh.wordpress.com/ -BEGIN PGP SIGNATURE- Version: GnuPG v1.4.11 (Darwin) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/ iEYEARECAAYFAk86938ACgkQB8UpO3rKjQ/mnQCePh03Hir66wu4R5X87/rE3bNL lV0An2hpDZoWzZp8X/sZ6W7xEEAQPqlc =iA22 -END PGP SIGNATURE- -- Virtualization Cloud Management Using Capacity Planning Cloud computing makes use of virtualization - but cloud computing also focuses on allowing computing to be delivered as a service. http://www.accelacomm.com/jaw/sfnl/114/51521223/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
