Re: [Fis] Concluding the Lecture? - In Praise of Teleodynamics

2015-02-05 Thread Bob Logan
Dear FiSers - I am glad that Pedro has allowed this discussion to continue for 
a a couple of more days so I can share two items of my work that relate to 
Terry's teleodynamic-based project.

1. One item is a paper I co-authored with Stuart Kauffman and others entitled 
The Propagation of Organization: An Enquiry that posits a link between 
constraints and information. Here is the abstract of that paper. I would be 
happy to share it off line with any interested parties:

Propagating Organization: An Enquiry - Stuart Kauffman,  Robert K. Logan, 
Robert Este, Randy Goebel, David Hobill and Ilya Smulevich. 2007. Propagating 
Organization: An Inquiry. Published in Biology and Philosophy 23: 27-45.

Abstract: Our aim in this article is to attempt to discuss propagating 
organization of process, a poorly articulated union of matter, energy, work, 
constraints and that vexed concept, “information”, which unite in far from 
equilibrium living physical systems. Our hope is to stimulate discussions by 
philosophers of biology and biologists to further clarify the concepts we 
discuss here. We place our discussion in the broad context of a “general 
biology”, properties that might well be found in life anywhere in the cosmos, 
freed from the specific examples of terrestrial life after 3.8 billion years of 
evolution. By placing the discussion in this wider, if still hypothetical, 
context, we also try to place in context some of the extant discussion of 
information as intimately related to DNA, RNA and protein transcription and 
translation processes. While characteristic of current terrestrial life, there 
are no compelling grounds to suppose the same mechanisms would be involved in 
any life form able to evolve by heritable variation and natural selection. In 
turn, this allows us to discuss at least briefly, the focus of much of the 
philosophy of biology on population genetics, which, of course, assumes DNA, 
RNA, proteins, and other features of terrestrial life. Presumably, evolution by 
natural selection – and perhaps self-organization - could occur on many worlds 
via different causal mechanisms.

Here we seek a non-reductionist explanation for the synthesis, accumulation, 
and propagation of information, work, and constraint, which we hope will 
provide some insight into both the biotic and abiotic universe, in terms of 
both molecular self reproduction and the basic work energy cycle where work is 
the constrained release of energy into a few degrees of freedom. The typical 
requirement for work itself is to construct those very constraints on the 
release of energy that then constitute further work. Information creation, we 
argue, arises in two ways: first information as natural selection assembling 
the very constraints on the release of energy that then constitutes work and 
the propagation of organization. Second, information in a more extended sense 
is “semiotic”, that is about the world or internal state of the organism and 
requires appropriate response. The idea is to combine ideas from biology, 
physics, and computer science, to formulate explanatory hypotheses on how 
information can be captured and rendered in the expected physical 
manifestation, which can then participate in the propagation of the 
organization of process in the expected biological work cycles to create the 
diversity in our observable biosphere.

Our conclusions, to date, of this enquiry suggest a foundation which views 
information as the construction of constraints, which, in their physical 
manifestation, partially underlie the processes of evolution to dynamically 
determine the fitness of organisms within the context of a biotic universe. 

A key line from the paper and one that Terry quotes in Incomplete Nature as 
private communication from Kauffman is: The first surprise is that it takes 
constraints on the release of energy to perform work, but it takes work to 
create constraints. The second surprise is that constraints are information and 
information is constraint.

2. The second item, which is highly speculative and for which I take sole 
responsibility, is my extension of Terry's notion of teleodynamics beyond the 
domain of biology to culture, language, organization, science, economics and 
technology. I share with you the abstract and would be happy to share the whole 
article off line with any interested parties. This paper was inspired from the 
following line in Incomplete Nature: Although [teleodynamics] is the 
distinguishing characteristic of living processes, it is not necessarily 
limited to the biological. – Deacon (2012, 275)

The Teleodynamics of Culture, Language, Organization, Science, Economics and 
Technology (CLOSET) Published in Systema: connecting matter, life, culture and 
technology Vol. 2, Issue 3, 2014.

Abstract: Logan (2007) in his book The Extended Mind developed the hypothesis 
that language, culture, and technology can be construed as organisms that 
evolve and reproduce 

Re: [Fis] Concluding the Lecture? - In Praise of Teleodynamics

2015-02-04 Thread Pedro C. Marijuan
No problem Bob, we can prolong the NY Lecture some extra days. My 
concern was the overload that these final messages ---more intense and 
argumentative-- could be causing on Terry's time budget. It is upon him 
whether he wants to continue responding in the current regime for 
instance until February the 15th (it means 12 extra days) or if he 
prefers to finalize right now and afterwards behave as a common 
participant, limited to two responding messages per week. We would start 
the next discussion session some weeks later, so there might be room for 
continuing the debate, but as an aftermath of the finalized Lecture. In 
my experience, putting limits to things clarifies the panorama and 
favors the debate. Very rarely we have had moderation conflicts in this 
list--what I personally thank to the general good mood of FISers. 
Nevertheless as a moderator I have to take care that we are not invaded 
by a cacophony of messages that block interesting exchanges, as happened 
in the first years of this list (18 years old!), and that our lecturing 
invitees do not get into unnecessary burdens... Navigating in between 
Scylla and Charibdis is not always easy!

best--Pedro

Bob Logan wrote:
Dear Pedro, Terry and Fellow FISers - 

I was composing the email below when your email appeared asking us not 
to respond any further to Terry's final remarks. I disagree with this 
arbitrary cutoff as I was about to send out what follows below. It 
also seems an abridgement of free speech to ask us not to discuss an 
issue we might be interested in. Perhaps I am unfamiliar with the 
ground rules of the FIS list but the other listservs I belong to have 
never attempted to cutoff a topic. There have been occasions where 
they have asked an individual who posts too often to not turn the list 
into their own bully pulpit. Anyway as the guy who suggested that we 
ask Terry to lead a FIS conversation I will exercise the perogative to 
share my thoughts one more time. I would also be prepared to accept 
your restriction if you had given us advanced notice with an exact 
deadline of shutting down this thread.
Here is what I had written when you sounded the bell as a death knell 
to this discussion which is submitted with respect and the undertaking 
to abide by the referee's decision and not comment on Terry's final 
remarks although I would love to hear from my colleagues their final 
thoughts on Terry's teleodynamic approach - Bob 

In order to respect the only 2 per week constraint here are my 
comments to the flurry of recent posts in this thread. There is one 
caveat with which I wish to preface my remarks and it is this:
 I am a member of Terry research team and therefore I am biased, but I 
would like to share with my FIS  colleagues why I believe the 
teleodynamic approach that Terry has developed is the best game in 
town for understanding the origin of life and the nature of information.


Pedro wrote on Jan 30:
At your convenience, during the first week of February or so we may 
put an end to the ongoing New Year Lecture --discussants willing to 
enter their late comments should hurry up. Your own final or 
concluding comment will be appreciated.


Bob's reply: Since Pedro issued the above call for the end of the 
discussion of Terry's provocative paper there has been a flurry of 
activity. As The English author Samuel Johnson (1709-1784) once wrote: 
Nothing so concentrates the mind as the hangman's noose! I hope we 
can carry on a week or two more as some of us are just warming up. The 
first of the year is a logical starting point for  a new discussion 
thread but it also corresponds to the beginning of a new semester here 
in Canada and other places in North America. I for one was focussed on 
launching the new semester and my courses so I respectfully request 
that we keep the conversation going for awhile longer before we start 
a new one.


Now I have a few comments to support Terry's teleodynamic approach 
which I present:


Joe Brenner wrote later on Jan 30:
we can all easily understand and agree that the incorporation of 
‘homunculi’, that is, unproven mechanisms, as explanatory, should be 
avoided. In my view, however, Terry has a small army of homunculi at 
work (sic!) who insure that his processes of self-organization, 
self-reconstitution and ‘spontaneous’ self-assembly can take place! 
The finality of using his simulated autogenic systems is “a rigorous 
physical foundation upon which” future complex theories of information 
may be based. If, as I contend, Terry’s approach has failed to take 
into account the fundamentally dualistic physical properties of real 
systems, it is hard to see how it could do so.


Bob's reply:  As much as it pains me to disagree with my friend Joe 
who is in general in support of Deacon's approach I have to counter 
his accuasation that Terry has a small army of homunculi at work: 
There are no homunculi in the autogen model. According to Deacon's 
approach an incredible 

Re: [Fis] Concluding the Lecture? - In Praise of Teleodynamics

2015-02-03 Thread Bob Logan
Dear Pedro, Terry and Fellow FISers - 

I was composing the email below when your email appeared asking us not to 
respond any further to Terry's final remarks. I disagree with this arbitrary 
cutoff as I was about to send out what follows below. It also seems an 
abridgement of free speech to ask us not to discuss an issue we might be 
interested in. Perhaps I am unfamiliar with the ground rules of the FIS list 
but the other listservs I belong to have never attempted to cutoff a topic. 
There have been occasions where they have asked an individual who posts too 
often to not turn the list into their own bully pulpit. Anyway as the guy who 
suggested that we ask Terry to lead a FIS conversation I will exercise the 
perogative to share my thoughts one more time. I would also be prepared to 
accept your restriction if you had given us advanced notice with an exact 
deadline of shutting down this thread.
Here is what I had written when you sounded the bell as a death knell to this 
discussion which is submitted with respect and the undertaking to abide by the 
referee's decision and not comment on Terry's final remarks although I would 
love to hear from my colleagues their final thoughts on Terry's teleodynamic 
approach - Bob 

In order to respect the only 2 per week constraint here are my comments to 
the flurry of recent posts in this thread. There is one caveat with which I 
wish to preface my remarks and it is this:
 I am a member of Terry research team and therefore I am biased, but I would 
like to share with my FIS  colleagues why I believe the teleodynamic approach 
that Terry has developed is the best game in town for understanding the origin 
of life and the nature of information.

Pedro wrote on Jan 30:
At your convenience, during the first week of February or so we may put an end 
to the ongoing New Year Lecture --discussants willing to enter their late 
comments should hurry up. Your own final or concluding comment will be 
appreciated.

Bob's reply: Since Pedro issued the above call for the end of the discussion of 
Terry's provocative paper there has been a flurry of activity. As The English 
author Samuel Johnson (1709-1784) once wrote: Nothing so concentrates the mind 
as the hangman's noose! I hope we can carry on a week or two more as some of 
us are just warming up. The first of the year is a logical starting point for  
a new discussion thread but it also corresponds to the beginning of a new 
semester here in Canada and other places in North America. I for one was 
focussed on launching the new semester and my courses so I respectfully request 
that we keep the conversation going for awhile longer before we start a new one.

Now I have a few comments to support Terry's teleodynamic approach which I 
present:

Joe Brenner wrote later on Jan 30:
we can all easily understand and agree that the incorporation of ‘homunculi’, 
that is, unproven mechanisms, as explanatory, should be avoided. In my view, 
however, Terry has a small army of homunculi at work (sic!) who insure that his 
processes of self-organization, self-reconstitution and ‘spontaneous’ 
self-assembly can take place! The finality of using his simulated autogenic 
systems is “a rigorous physical foundation upon which” future complex theories 
of information may be based. If, as I contend, Terry’s approach has failed to 
take into account the fundamentally dualistic physical properties of real 
systems, it is hard to see how it could do so.

Bob's reply:  As much as it pains me to disagree with my friend Joe who is in 
general in support of Deacon's approach I have to counter his accuasation that 
Terry has a small army of homunculi at work: There are no homunculi in the 
autogen model. According to Deacon's approach an incredible co-incidence has 
occurred in which the two self organizing processes of auto-catalysis and the 
self assembly of the crystal-like membranes became self-supporting. It is only 
by a chance event that one can explain how an organization of molecules with 
properties so different from abiotic matter suddenly became alive, able to 
propagate its organization and emerge as a self that acts teleonomically in its 
own interest. That co-incidence is the one in a billion or more chance that the 
by product of a particular autocatalytic set were also the ingredients for the 
self assembly of a bi-lipid membrane that could encase the autocatalytic set in 
a protective membrane and that the by products of that self-assembly process 
provided the raw materials for the very same autocatalysis. This is not a 
homunucli but just plain dumb luck or to give it a fancy name an aleatoric 
event, a one in a trillion event, but given the billion year (or multi-trillion 
second) time scale it becomes inevitable that such a rare event will occur. The 
two self-organizing processes that combined to form the purported autogen are 
due to first order extrinsic constraints. That these two constraints could be 
mutually